Citrus Sinensis ID: 019535

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MDIEKPSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEccEEEEcccccccccEEEEccccccccccEEEccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccEEEcccccccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHccccEEEEEEEccccccEEEcccHHEEcccEEEEEEcccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEccccccccccEEccccEEEEEEEEcccccccccccEEEEcccccccccccccccccccccccHHHHcccccccccccEEEcccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHcccccHHHEHEEcccccccEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHcccccEEEEEEcc
Coil and Loop (DISEMBL)
mdiekpsnktagkpiqcravfprilghEAIGVVEsvgenvdgvvegdvviphfladctecvgcrskkgnlcsafpfkispwmprdqtsrfkdlrgetihhfvsvssfseytvLDIAHvvkvdptvppnracllscgvstgvgAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKfeigkrfgvtefvnskncgdksvSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVlgvdqpgsqlslssFEVLHSGKILMGslfgglkaksdipILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Flexible Loop (DISEMBL)
mdiekpsnktagkpiqcRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSafpfkispwmprdQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRfgvtefvnskncgdksVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Low Complexity Region (SEG)
MDIEKPSNKTAGKPIQCRAVFPRILGHEAIgvvesvgenvdgvvegdvvIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Disordered region (IsUnstruct)
**************IQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM**
Disordered Region (DISOPRED)
**IEKPSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG*
Disordered Region (DISEMBL)
************KPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Disordered Region (DISPRO)
*DIEKPSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDIEKPSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q9FH04	390	Alcohol dehydrogenase-lik	yes	no	0.943	0.820	0.766	1e-146
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.932	0.814	0.600	1e-109
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.943	0.822	0.599	1e-109
Q9SK87	386	Alcohol dehydrogenase-lik	no	no	0.938	0.823	0.6	1e-107
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.929	0.826	0.504	2e-90
Q0DWH1	381	Alcohol dehydrogenase cla	no	no	0.929	0.826	0.504	2e-90
Q96533	379	Alcohol dehydrogenase cla	no	no	0.920	0.823	0.503	5e-90
P80572	378	Alcohol dehydrogenase cla	N/A	no	0.929	0.833	0.492	8e-88
P93629	381	Alcohol dehydrogenase cla	N/A	no	0.926	0.824	0.481	1e-86
Q8LEB2	381	Alcohol dehydrogenase-lik	no	no	0.941	0.837	0.478	2e-83

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  517 bits (1331), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/321 (76%), Positives = 281/321 (87%), Gaps = 1/321 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 79  SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
           VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+  ELELDKFVTHEMKFEE
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEE 369

Query: 318 INSAFDLLIKGKCLRCVIWMG 338
           IN AF LL++GKC+RCV+WMG
Sbjct: 370 INDAFQLLLEGKCIRCVLWMG 390

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  394 bits (1012), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/318 (60%), Positives = 245/318 (77%), Gaps = 2/318 (0%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-IS 79
           FPRILGHEA+GVVES+GENVDG  +GDVV+P F   C EC  C+S K N C  +    IS
Sbjct: 70  FPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFIS 129

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
                   SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVST
Sbjct: 130 NTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVST 189

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
           G+GAAW+ ANVE GST+ IFGLG++GLAVAEGARL GA +IIG+D  S+KFE+GK+FG T
Sbjct: 190 GIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFT 249

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
           +F+N   CG+K +S++I +MT+GG DY FECVGLASL+ EA+   R G GKT++LG+++ 
Sbjct: 250 DFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKH 309

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
            + +SL SF++L  G+++ GSLFGGLK+K DIPIL+  Y+ KEL LD F+THE+ F+EIN
Sbjct: 310 AAPISLGSFDLLR-GRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEIN 368

Query: 320 SAFDLLIKGKCLRCVIWM 337
            AF LL +GK LRC++WM
Sbjct: 369 KAFALLEEGKSLRCILWM 386

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  394 bits (1012), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/322 (59%), Positives = 248/322 (77%), Gaps = 2/322 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK- 77
           A FPRILGHEA+GV+ES+GE+V+G  +GDVV+P F   C EC  C+S K N C+ F    
Sbjct: 69  ARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDF 128

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
           +S       TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGV
Sbjct: 129 LSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGV 188

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STG+GAAW+ ANVE GSTV +FGLG++GLAV EGARL GA +IIGVD+  EKFE+GK+FG
Sbjct: 189 STGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFG 248

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
            T+F+NS  CG+  +S++I +MT GG DY FECVGL SL+ EA++  R G GKT+VLG+D
Sbjct: 249 FTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGID 308

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
           +  + +SL SF++L  G+ + GSLFGGLK K DIPIL+  Y+ KEL LD F+THE+KFEE
Sbjct: 309 KHLTPVSLGSFDLLR-GRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEE 367

Query: 318 INSAFDLLIKGKCLRCVIWMGE 339
           IN AFDLL++GK LRC++WM +
Sbjct: 368 INKAFDLLVQGKSLRCILWMNK 389

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/320 (60%), Positives = 243/320 (75%), Gaps = 2/320 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK- 77
           A FPRILGHEA+GVVES+GE VDG  +GDVV+P F   C EC  C S K N C+ +    
Sbjct: 66  ARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDY 125

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
           +S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V
Sbjct: 126 LSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSV 185

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           +TG+GAAW+ A+VE GSTVVIFGLG++GLAVAEG RL GA +IIGVD+   KFEIGKRFG
Sbjct: 186 ATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFG 245

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
           +T+FVN   CG+K++S++I +MTD GADY FEC+GLASL++EA+   R G GKTIVLG++
Sbjct: 246 ITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGME 305

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
           Q    +SL S+++L  G+ + G+LFGGLK K DIPIL+ RY+ KEL L+  +THE+ FEE
Sbjct: 306 QKALPISLGSYDLLR-GRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEE 364

Query: 318 INSAFDLLIKGKCLRCVIWM 337
           IN AF LL +G  +RC+IWM
Sbjct: 365 INKAFHLLAEGNSIRCIIWM 384

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/319 (50%), Positives = 226/319 (70%), Gaps = 4/319 (1%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 121

Query: 78  ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL CG
Sbjct: 122 TGVGVMMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCG 180

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           VSTG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+KF++ K F
Sbjct: 181 VSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNF 240

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           GVTEFVN K+  DK + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 241 GVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 299

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
              G ++S   F+++ +G++  G+ FGG K++S +P L+++Y++KE+++D++VTH M   
Sbjct: 300 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLT 358

Query: 317 EINSAFDLLIKGKCLRCVI 335
           +IN AFDLL +G CLRCV+
Sbjct: 359 DINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/319 (50%), Positives = 226/319 (70%), Gaps = 4/319 (1%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 121

Query: 78  ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL CG
Sbjct: 122 TGVGVMMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCG 180

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           VSTG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+KF++ K F
Sbjct: 181 VSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNF 240

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           GVTEFVN K+  DK + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 241 GVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 299

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
              G ++S   F+++ +G++  G+ FGG K++S +P L+++Y++KE+++D++VTH M   
Sbjct: 300 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLT 358

Query: 317 EINSAFDLLIKGKCLRCVI 335
           +IN AFDLL +G CLRCV+
Sbjct: 359 DINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  331 bits (849), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 228/322 (70%), Gaps = 10/322 (3%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC----SA 73
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC    SA
Sbjct: 60  EGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSA 119

Query: 74  FPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
               I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL
Sbjct: 120 TGVGI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLL 175

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            CGV TG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+K+E  
Sbjct: 176 GCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA 235

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           K+FGV EFVN K+  DK + ++I+D+TDGG DY FEC+G  S+++ A  CC KGWG +++
Sbjct: 236 KKFGVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 294

Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           +GV   G ++S   F+++ +G++  G+ FGG K+++ +P L+++YM+KE+++D+++TH +
Sbjct: 295 VGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNL 353

Query: 314 KFEEINSAFDLLIKGKCLRCVI 335
              EIN AFDLL +G CLRCV+
Sbjct: 354 TLGEINKAFDLLHEGTCLRCVL 375

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1

 Score =  324 bits (830), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 157/319 (49%), Positives = 223/319 (69%), Gaps = 4/319 (1%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 59  EGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAA 118

Query: 78  ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                M  D+ SRF  ++G+ I+HF+  S+FS+YTV+    V K+ P  P ++ CLL CG
Sbjct: 119 TGVGVMMADRKSRF-SVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCG 177

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           V TG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S K++  K F
Sbjct: 178 VPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNF 237

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           GVTEF+N K+  +K + Q+IID+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 238 GVTEFINPKD-HEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGV 296

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
              G ++S   F+++ +G++  G+ FGG K++S +P L+++Y+ KE+++D+++TH +   
Sbjct: 297 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLL 355

Query: 317 EINSAFDLLIKGKCLRCVI 335
           EIN AFDLL +G+CLRCV+
Sbjct: 356 EINKAFDLLHEGQCLRCVL 374

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1

 Score =  320 bits (819), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/324 (48%), Positives = 223/324 (68%), Gaps = 10/324 (3%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC----SA 73
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC    SA
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSA 121

Query: 74  FPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
               +   M  D  SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL
Sbjct: 122 TGVGV---MMNDMKSRFS-VNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLL 177

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            CGV TG+GA W TA VE GS V +FGLG++GLAVAEGA+  GA+R+IG+D+ ++KF++ 
Sbjct: 178 GCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVA 237

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           K FGVTEFVN K   DK + Q+++D+TDGG DY FEC+G  S+++ A  C  KGWG +++
Sbjct: 238 KNFGVTEFVNPKE-HDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVI 296

Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           +GV   G ++S   F+++ +G++  G+ FGG K+++ +P L+ +YM KE+++D+++TH M
Sbjct: 297 VGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNM 355

Query: 314 KFEEINSAFDLLIKGKCLRCVIWM 337
              +IN AF LL +G CLRCV+ M
Sbjct: 356 NLADINDAFHLLHEGGCLRCVLAM 379

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2

 Score =  309 bits (791), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 218/322 (67%), Gaps = 3/322 (0%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
           + +++ PRI GHEA G+VES+GE V    +GD V+  F  +C  C  C S K N+C    
Sbjct: 61  ESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLG 120

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
            +    M  DQ +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSC
Sbjct: 121 MERKGLMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSC 179

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
           GV+ G+GAAW  A+V+ GS+VVIFGLG++GL+VA+GA+L GA +I+GVD+   K E  K 
Sbjct: 180 GVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKT 239

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           FGVT+F+NS +  +  + Q+I  MT GGAD+ FECVG   +   A   C  GWG T+ LG
Sbjct: 240 FGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLG 298

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
           V +   ++S + + +  SGK L G+LFGG K KSD+P L+ +YM+KE+ +D+F+TH + F
Sbjct: 299 VPKAKPEVS-AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSF 357

Query: 316 EEINSAFDLLIKGKCLRCVIWM 337
           +EIN AF L+ +GKCLRCV+ M
Sbjct: 358 DEINKAFVLMREGKCLRCVLHM 379

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
255539138	386	alcohol dehydrogenase, putative [Ricinus	0.946	0.831	0.785	1e-146
225459818	384	PREDICTED: alcohol dehydrogenase-like 7	0.935	0.825	0.769	1e-146
15238330	390	alcohol dehydrogenase-like 7 [Arabidopsi	0.943	0.820	0.766	1e-144
297795321	390	hypothetical protein ARALYDRAFT_494804 [	0.943	0.820	0.757	1e-143
356501338	387	PREDICTED: alcohol dehydrogenase-like 7-	0.941	0.824	0.755	1e-142
7705214	389	alcohol dehydrogenase ADH [Solanum lycop	0.935	0.814	0.750	1e-142
356554321	388	PREDICTED: alcohol dehydrogenase-like 7-	0.941	0.822	0.761	1e-142
356554319	387	PREDICTED: alcohol dehydrogenase-like 7-	0.941	0.824	0.761	1e-142
356574454	392	PREDICTED: alcohol dehydrogenase-like 7-	0.941	0.813	0.746	1e-140
356574456	389	PREDICTED: alcohol dehydrogenase-like 7-	0.941	0.820	0.746	1e-140

>gi|255539138|ref|XP_002510634.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223551335|gb|EEF52821.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/321 (78%), Positives = 284/321 (88%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           AVFPRILGHEA+GVVESVGE+V    EGD VIP FL DC +C  C SKK NLCS  PFK+
Sbjct: 66  AVFPRILGHEAVGVVESVGEDVKEFKEGDTVIPTFLPDCGDCTDCISKKSNLCSKLPFKV 125

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPR +TSRF DL GE ++HF+SVSSFS+YTV+DIAH+ KVDP++PPNRACLLSCGVS
Sbjct: 126 SPWMPRYETSRFTDLNGEALYHFLSVSSFSQYTVIDIAHLTKVDPSIPPNRACLLSCGVS 185

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TGVGAAWRTANVE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD    KFEIGK+FGV
Sbjct: 186 TGVGAAWRTANVEAGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDTNPNKFEIGKKFGV 245

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           TEFV++ + G+KS SQ+I +MT GGADYCFECVGLASLV+EAY+CCRKGWGKTIVLGVD+
Sbjct: 246 TEFVSAGDLGNKSASQVINEMTGGGADYCFECVGLASLVREAYSCCRKGWGKTIVLGVDK 305

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PG+QLSLSSF+VLHSGKIL GSLFGGLKAKSDIP+LLKRY  KEL+LD+FVTHE+ FE+I
Sbjct: 306 PGAQLSLSSFDVLHSGKILTGSLFGGLKAKSDIPVLLKRYTAKELQLDEFVTHEINFEDI 365

Query: 319 NSAFDLLIKGKCLRCVIWMGE 339
           N AFDLLI G+ LRCVIWM +
Sbjct: 366 NKAFDLLIGGESLRCVIWMNK 386

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459818|ref|XP_002285916.1| PREDICTED: alcohol dehydrogenase-like 7 [Vitis vinifera] gi|302141683|emb|CBI18886.3| unnamed protein product [Vitis vinifera]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 244/317 (76%), Positives = 284/317 (89%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FPRILGHEA+GVVESVGENV  V EGD+V+P FL DC EC  CRS+K NLCS FPFK+SP
Sbjct: 66  FPRILGHEAVGVVESVGENVSEVTEGDIVLPIFLPDCGECTDCRSEKSNLCSKFPFKVSP 125

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
           WMPR ++SRF DL+GE ++HF+ VSSFSEYTV+DIA++ K+DP +PPNRACL SCGVSTG
Sbjct: 126 WMPRYESSRFTDLKGEVLYHFLFVSSFSEYTVVDIANITKIDPNIPPNRACLFSCGVSTG 185

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           VGAAW+TANVE GSTV IFGLG+IGLAVAEGARLCGA+RIIGVD+  +KFEIGK+FGVT+
Sbjct: 186 VGAAWKTANVEKGSTVAIFGLGAIGLAVAEGARLCGASRIIGVDLNPDKFEIGKKFGVTD 245

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
           FVNS NCG+K V Q+I++MTDGGADYCFECVG ASLV EA+ACCRKGWGKTIVLGVD+PG
Sbjct: 246 FVNSGNCGNKPVKQVIMEMTDGGADYCFECVGAASLVHEAFACCRKGWGKTIVLGVDRPG 305

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
           S L+  SF++LHSGK LMGSL+GG+K KSDIPILLKRYMDKEL++DKFVTHEM+FE+IN 
Sbjct: 306 SMLNFLSFDILHSGKSLMGSLYGGVKPKSDIPILLKRYMDKELDVDKFVTHEMRFEDINK 365

Query: 321 AFDLLIKGKCLRCVIWM 337
           AFDLLI+GK LRCV+WM
Sbjct: 366 AFDLLIQGKSLRCVLWM 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238330|ref|NP_199040.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana] gi|75333830|sp|Q9FH04.1|ADHL7_ARATH RecName: Full=Alcohol dehydrogenase-like 7 gi|10177010|dbj|BAB10198.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|19698971|gb|AAL91221.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|22136298|gb|AAM91227.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|332007405|gb|AED94788.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/321 (76%), Positives = 281/321 (87%), Gaps = 1/321 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 79  SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
           VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+  ELELDKFVTHEMKFEE
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEE 369

Query: 318 INSAFDLLIKGKCLRCVIWMG 338
           IN AF LL++GKC+RCV+WMG
Sbjct: 370 INDAFQLLLEGKCIRCVLWMG 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795321|ref|XP_002865545.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata] gi|297311380|gb|EFH41804.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/321 (75%), Positives = 282/321 (87%), Gaps = 1/321 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC ECV C+S+K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGECVDCKSQKSNLCSKFPFKV 129

Query: 79  SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
           SPWMPR + +SRF DL G+T+ HF++VSSFSEYTVLD+A++VK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYENSSRFTDLNGQTLFHFLNVSSFSEYTVLDVANIVKIDSSIPPSRACLLSCGV 189

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G+ FG
Sbjct: 190 STGVGAAWETAKVEQGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPAKFQVGQNFG 249

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
           +TEFVNS  C  KSVS++I +MT GGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 ITEFVNSMTCEKKSVSEVINEMTGGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IP+LLKRY+  ELELDKFVTHEMKFEE
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPLLLKRYLSNELELDKFVTHEMKFEE 369

Query: 318 INSAFDLLIKGKCLRCVIWMG 338
           IN AF LL++GKC+RCV+WMG
Sbjct: 370 INDAFQLLLEGKCIRCVLWMG 390

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501338|ref|XP_003519482.1| PREDICTED: alcohol dehydrogenase-like 7-like [Glycine max]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/319 (75%), Positives = 281/319 (88%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A++PRILGHEAIGVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLCS FPF++
Sbjct: 67  AIYPRILGHEAIGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEV 126

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPR  TSRF DL+GE IHHF+SVSSFSEYTV+DIAH++K+DP +PPNRACL+SCG+S
Sbjct: 127 SPWMPRYATSRFTDLKGEIIHHFLSVSSFSEYTVVDIAHLIKIDPAIPPNRACLISCGIS 186

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
            G+GAAWR A VE GSTV IFGLGSIGLAVAEGARLCGAT+IIGVDV  E++EIGKRFG+
Sbjct: 187 AGIGAAWRAAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPERYEIGKRFGL 246

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FV+S  C +KSVSQ+II+MT GGADYCFECVG+ASL+ EAYA CRKGWGKTIVLGVD+
Sbjct: 247 TDFVHSGECENKSVSQVIIEMTGGGADYCFECVGMASLMHEAYASCRKGWGKTIVLGVDK 306

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PGS+L+LS  EVL SGK L G LFGGLK KS +PILLKRYMDKEL LD+FVTHEM+F++I
Sbjct: 307 PGSKLNLSCSEVLVSGKSLRGCLFGGLKPKSHVPILLKRYMDKELNLDEFVTHEMEFKDI 366

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N AFDLLI+G+CLRCVIWM
Sbjct: 367 NKAFDLLIEGQCLRCVIWM 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7705214|gb|AAB33480.2| alcohol dehydrogenase ADH [Solanum lycopersicum]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/317 (75%), Positives = 280/317 (88%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FPRILGHEA GVVESVGE+VD + EGD V+P FL DC +CV C+SKK NLCS FP ++SP
Sbjct: 70  FPRILGHEAFGVVESVGEDVDELKEGDSVVPIFLPDCMDCVDCKSKKSNLCSKFPIQVSP 129

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            + R+ TSRF +  GET+HHF+ +SSFSEYTV+D+ +V K+DP +PPNRACLLSCGVSTG
Sbjct: 130 LLHRNDTSRFSNAAGETLHHFLYISSFSEYTVVDVVNVTKIDPEIPPNRACLLSCGVSTG 189

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           VGAAW+TANVE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD+ S KFEIGK+FG+TE
Sbjct: 190 VGAAWKTANVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDINSNKFEIGKQFGITE 249

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
           FVNSK+C DK +SQ+II+MTDGGADYCFECVGLA+LVQEA+ CCRKGWGKT+VLGVD+P 
Sbjct: 250 FVNSKSCVDKPISQVIIEMTDGGADYCFECVGLATLVQEAFTCCRKGWGKTVVLGVDKPD 309

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
           + L+L+SFEVL S K L G+LFGGLK KSD+PIL+KRY+DKEL+L+KFVTHE+ FE+IN 
Sbjct: 310 AHLNLNSFEVLQSQKTLTGALFGGLKPKSDVPILVKRYLDKELQLNKFVTHEVNFEDINK 369

Query: 321 AFDLLIKGKCLRCVIWM 337
           AFDLLI+GK LRCVIWM
Sbjct: 370 AFDLLIQGKSLRCVIWM 386

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554321|ref|XP_003545496.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 2 [Glycine max]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/319 (76%), Positives = 281/319 (88%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLCS FPF++
Sbjct: 68  AICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEV 127

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRACLLSCGVS
Sbjct: 128 SPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRACLLSCGVS 187

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TGVGAAWRTA VE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  EK+E GK+FG+
Sbjct: 188 TGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKYETGKKFGL 247

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FV++    +KSVSQ+II+MT GGADYCFECVG+A+LVQEAYA CRKGWGK IVLGV++
Sbjct: 248 TDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGKAIVLGVEK 307

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PGS LSLS  EVLHSGK L+G LFGGLK KSD+PILLKRYMDKEL LD+FVTHE++F++I
Sbjct: 308 PGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDKELNLDEFVTHEVEFKDI 367

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N AFDLLI+G+CLRCVIWM
Sbjct: 368 NKAFDLLIEGQCLRCVIWM 386

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554319|ref|XP_003545495.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max]

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/319 (76%), Positives = 281/319 (88%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLCS FPF++
Sbjct: 67  AICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKFPFEV 126

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRACLLSCGVS
Sbjct: 127 SPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRACLLSCGVS 186

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TGVGAAWRTA VE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  EK+E GK+FG+
Sbjct: 187 TGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKYETGKKFGL 246

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FV++    +KSVSQ+II+MT GGADYCFECVG+A+LVQEAYA CRKGWGK IVLGV++
Sbjct: 247 TDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGKAIVLGVEK 306

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PGS LSLS  EVLHSGK L+G LFGGLK KSD+PILLKRYMDKEL LD+FVTHE++F++I
Sbjct: 307 PGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDKELNLDEFVTHEVEFKDI 366

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N AFDLLI+G+CLRCVIWM
Sbjct: 367 NKAFDLLIEGQCLRCVIWM 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574454|ref|XP_003555362.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/319 (74%), Positives = 279/319 (87%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A+FPRILGHEA GVVESVG++V  V +GDVVIP  L +C EC+ C+S K N C+ FPFK+
Sbjct: 72  AIFPRILGHEATGVVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTNFPFKV 131

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPRD T+RF    GE I+HF+ +SSFSEYTV+DIA+++K+DP +PP+RACLL CGVS
Sbjct: 132 SPWMPRDGTTRFTGQNGEIIYHFLFISSFSEYTVVDIANLIKIDPEIPPDRACLLGCGVS 191

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TGVGAAWRTA VE GSTV IFGLGSIGLAVAEGARLCGATRIIGVD+  EKFEIGK+FGV
Sbjct: 192 TGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINPEKFEIGKKFGV 251

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FVN+  CG K V Q+II++TDGGADYCFECVG+ASLV EAYA CRKGWGKTIVLGVD+
Sbjct: 252 TDFVNAGECGGKPVGQVIIEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDK 311

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PG++++LSS+EVLH GK LMGSLFGGLK KS +PILLKRYMDKEL+LDKFVTHE++F++I
Sbjct: 312 PGARINLSSYEVLHDGKSLMGSLFGGLKPKSHVPILLKRYMDKELQLDKFVTHEVEFKDI 371

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N AFDLL KG+CLRCVIWM
Sbjct: 372 NKAFDLLSKGECLRCVIWM 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574456|ref|XP_003555363.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 2 [Glycine max]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/319 (74%), Positives = 279/319 (87%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A+FPRILGHEA GVVESVG++V  V +GDVVIP  L +C EC+ C+S K N C+ FPFK+
Sbjct: 69  AIFPRILGHEATGVVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTNFPFKV 128

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SPWMPRD T+RF    GE I+HF+ +SSFSEYTV+DIA+++K+DP +PP+RACLL CGVS
Sbjct: 129 SPWMPRDGTTRFTGQNGEIIYHFLFISSFSEYTVVDIANLIKIDPEIPPDRACLLGCGVS 188

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TGVGAAWRTA VE GSTV IFGLGSIGLAVAEGARLCGATRIIGVD+  EKFEIGK+FGV
Sbjct: 189 TGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINPEKFEIGKKFGV 248

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FVN+  CG K V Q+II++TDGGADYCFECVG+ASLV EAYA CRKGWGKTIVLGVD+
Sbjct: 249 TDFVNAGECGGKPVGQVIIEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDK 308

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PG++++LSS+EVLH GK LMGSLFGGLK KS +PILLKRYMDKEL+LDKFVTHE++F++I
Sbjct: 309 PGARINLSSYEVLHDGKSLMGSLFGGLKPKSHVPILLKRYMDKELQLDKFVTHEVEFKDI 368

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N AFDLL KG+CLRCVIWM
Sbjct: 369 NKAFDLLSKGECLRCVIWM 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.943	0.820	0.716	1.4e-129
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.943	0.822	0.562	1.3e-96
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.932	0.814	0.553	8.8e-96
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.938	0.823	0.556	3.4e-94
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.941	0.837	0.447	4.6e-73
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.923	0.832	0.427	1.8e-69
TIGR_CMR|SO_2054	379	SO_2054 "alcohol dehydrogenase	0.920	0.823	0.422	3.5e-68
TIGR_CMR|SO_A0161	376	SO_A0161 "zinc-containing alco	0.920	0.829	0.419	4.4e-68
SGD|S000002327	386	SFA1 "Bifunctional alcohol deh	0.929	0.816	0.405	4.7e-68
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.938	0.807	0.443	5.6e-68

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1243 (442.6 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
 Identities = 230/321 (71%), Positives = 265/321 (82%)

Query:    19 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
             A FPRILGHEAI                   +P F+ DC +CV C+S K NLCS FPFK+
Sbjct:    70 ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query:    79 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
             SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct:   130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query:   138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
             STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct:   190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query:   198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
             VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct:   250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query:   258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
             +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+  ELELDKFVTHEMKFEE
Sbjct:   310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEE 369

Query:   318 INSAFDLLIKGKCLRCVIWMG 338
             IN AF LL++GKC+RCV+WMG
Sbjct:   370 INDAFQLLLEGKCIRCVLWMG 390

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
 Identities = 181/322 (56%), Positives = 231/322 (71%)

Query:    19 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK- 77
             A FPRILGHEA+                   +P F   C EC  C+S K N C+ F    
Sbjct:    69 ARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDF 128

Query:    78 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
             +S       TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGV
Sbjct:   129 LSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGV 188

Query:   138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
             STG+GAAW+ ANVE GSTV +FGLG++GLAV EGARL GA +IIGVD+  EKFE+GK+FG
Sbjct:   189 STGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFG 248

Query:   198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
              T+F+NS  CG+  +S++I +MT GG DY FECVGL SL+ EA++  R G GKT+VLG+D
Sbjct:   249 FTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGID 308

Query:   258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
             +  + +SL SF++L  G+ + GSLFGGLK K DIPIL+  Y+ KEL LD F+THE+KFEE
Sbjct:   309 KHLTPVSLGSFDLLR-GRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEE 367

Query:   318 INSAFDLLIKGKCLRCVIWMGE 339
             IN AFDLL++GK LRC++WM +
Sbjct:   368 INKAFDLLVQGKSLRCILWMNK 389

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 930 (332.4 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
 Identities = 176/318 (55%), Positives = 228/318 (71%)

Query:    21 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-IS 79
             FPRILGHEA+                   +P F   C EC  C+S K N C  +    IS
Sbjct:    70 FPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFIS 129

Query:    80 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
                     SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVST
Sbjct:   130 NTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVST 189

Query:   140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             G+GAAW+ ANVE GST+ IFGLG++GLAVAEGARL GA +IIG+D  S+KFE+GK+FG T
Sbjct:   190 GIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFT 249

Query:   200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
             +F+N   CG+K +S++I +MT+GG DY FECVGLASL+ EA+   R G GKT++LG+++ 
Sbjct:   250 DFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKH 309

Query:   260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
              + +SL SF++L  G+++ GSLFGGLK+K DIPIL+  Y+ KEL LD F+THE+ F+EIN
Sbjct:   310 AAPISLGSFDLLR-GRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEIN 368

Query:   320 SAFDLLIKGKCLRCVIWM 337
              AF LL +GK LRC++WM
Sbjct:   369 KAFALLEEGKSLRCILWM 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 910 (325.4 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
 Identities = 178/320 (55%), Positives = 227/320 (70%)

Query:    19 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK- 77
             A FPRILGHEA+                   +P F   C EC  C S K N C+ +    
Sbjct:    66 ARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDY 125

Query:    78 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
             +S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V
Sbjct:   126 LSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSV 185

Query:   138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
             +TG+GAAW+ A+VE GSTVVIFGLG++GLAVAEG RL GA +IIGVD+   KFEIGKRFG
Sbjct:   186 ATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFG 245

Query:   198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
             +T+FVN   CG+K++S++I +MTD GADY FEC+GLASL++EA+   R G GKTIVLG++
Sbjct:   246 ITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGME 305

Query:   258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
             Q    +SL S+++L  G+ + G+LFGGLK K DIPIL+ RY+ KEL L+  +THE+ FEE
Sbjct:   306 QKALPISLGSYDLLR-GRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEE 364

Query:   318 INSAFDLLIKGKCLRCVIWM 337
             IN AF LL +G  +RC+IWM
Sbjct:   365 INKAFHLLAEGNSIRCIIWM 384

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 144/322 (44%), Positives = 205/322 (63%)

Query:    16 QCRAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFP 75
             + +++ PRI GHEA                    +  F  +C  C  C S K N+C    
Sbjct:    61 ESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLG 120

Query:    76 FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
              +    M  DQ +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSC
Sbjct:   121 MERKGLMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSC 179

Query:   136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
             GV+ G+GAAW  A+V+ GS+VVIFGLG++GL+VA+GA+L GA +I+GVD+   K E  K 
Sbjct:   180 GVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKT 239

Query:   196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
             FGVT+F+NS +  +  + Q+I  MT GGAD+ FECVG   +   A   C  GWG T+ LG
Sbjct:   240 FGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLG 298

Query:   256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
             V +   ++S + + +  SGK L G+LFGG K KSD+P L+ +YM+KE+ +D+F+TH + F
Sbjct:   299 VPKAKPEVS-AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSF 357

Query:   316 EEINSAFDLLIKGKCLRCVIWM 337
             +EIN AF L+ +GKCLRCV+ M
Sbjct:   358 DEINKAFVLMREGKCLRCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 135/316 (42%), Positives = 194/316 (61%)

Query:    20 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             +FP ILGHE                     IP ++  C EC  C++ K NLC        
Sbjct:    62 LFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQG 121

Query:    80 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
               +  D TSRF   +G+ + HF+  S+FSEYTV+    + KVD   P ++ CLL CG+ST
Sbjct:   122 QGLMPDNTSRFT-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGIST 180

Query:   140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             G GAA  TA VE GST  +FGLG++GLAV  G +  GATRIIG+DV  +KFEI K+FG T
Sbjct:   181 GYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGAT 240

Query:   200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
             EFVN K+   K + ++++++TDGG DY FEC+G   +++ A   C KGWG ++++GV   
Sbjct:   241 EFVNPKD-HSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGA 299

Query:   260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
             G ++S   F+++ +G+   G+ FGG K+   +P L+  YM+K+L +D+FVTH + F +IN
Sbjct:   300 GQEISTRPFQLV-TGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQIN 358

Query:   320 SAFDLLIKGKCLRCVI 335
              AFDL+  GK +R V+
Sbjct:   359 EAFDLMHAGKSIRAVL 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TIGR_CMR|SO_2054 SO_2054 "alcohol dehydrogenase class III" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 134/317 (42%), Positives = 195/317 (61%)

Query:    20 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             VFP ILGHE                     IP +  +C EC  C S K NLC        
Sbjct:    63 VFPAILGHEGGGIVEQVGEGVTSVQVGDHVIPLYTPECGECKFCLSGKTNLCQKIRATQG 122

Query:    80 PWMPRDQTSRF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
               +  D T+RF KD  G+ I H++  S+FSEYTVL    + KV+ T P    CLL CGV+
Sbjct:   123 KGLMPDGTTRFYKD--GQPIFHYMGCSTFSEYTVLPEISLAKVNKTAPLKEICLLGCGVT 180

Query:   139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
             TG+GA   TA VE G+TV IFGLG IGL+   GA +  A+RII +D+   KFE+ ++ G 
Sbjct:   181 TGMGAVMNTAKVEAGATVAIFGLGGIGLSAIIGATMAKASRIIAIDINESKFELARKLGA 240

Query:   199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
             T+ +N KN  DK + ++I++MTDGG DY FEC+G  ++++ A  CC KGWG+++++GV  
Sbjct:   241 TDCINPKNF-DKPIQEVIVEMTDGGVDYSFECIGNVNVMRSALECCHKGWGESVIIGVAG 299

Query:   259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
              G ++S   F+++ +G++  GS FGG+K +S +P ++++Y+  E +LD F+TH M  E++
Sbjct:   300 AGQEISTRPFQLV-TGRVWRGSAFGGVKGRSQLPKIVEQYLAGEFKLDDFITHTMGLEQV 358

Query:   319 NSAFDLLIKGKCLRCVI 335
             N AFDL+ +GK +R VI
Sbjct:   359 NEAFDLMHEGKSIRSVI 375

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 133/317 (41%), Positives = 195/317 (61%)

Query:    20 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             +FP ILGHE                     IP +  +C EC  C+S K NLC        
Sbjct:    60 IFPCILGHEGGGIVESIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTNLCQKIRETQG 119

Query:    80 PWMPRDQTSRF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
               +  D TSRF KD  G+ I+H++  S+FSEYTVL    + KV+P  P    CLL CGV+
Sbjct:   120 KGLMPDGTSRFSKD--GQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEEVCLLGCGVT 177

Query:   139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
             TG+GA   TA VE G+TV IFG+G IGL+   GA +  A+RII +D+   KFE+  + G 
Sbjct:   178 TGMGAVMNTAKVEEGATVAIFGMGGIGLSAVIGATMAKASRIIVIDINESKFELAGKLGA 237

Query:   199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
             T+F+N K+  DK +  +I+++TDGG DY FEC+G  ++++ A  CC KGWG+++V+GV  
Sbjct:   238 TDFINPKDY-DKPIQDVIVELTDGGVDYSFECIGNVNVMRSALECCHKGWGESVVIGVAG 296

Query:   259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
              G ++S   F+++ +G++  GS FGG+K +S++P  ++RY+  E +L  F+TH M  E++
Sbjct:   297 AGQEISTRPFQLV-TGRVWKGSAFGGVKGRSELPEYVERYLAGEFKLSDFITHTMSLEQV 355

Query:   319 NSAFDLLIKGKCLRCVI 335
             N AFDL+ +GK +R VI
Sbjct:   356 NDAFDLMHQGKSIRTVI 372

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

SGD|S000002327 SFA1 "Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 670 (240.9 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
 Identities = 129/318 (40%), Positives = 199/318 (62%)

Query:    20 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             +FP +LGHE                     I  + A+C +C  C S K NLC A      
Sbjct:    64 LFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQG 123

Query:    80 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
               +  D T+RF + +GE I+HF+  S+FSEYTV+    VV +DP  P + ACLL CGV+T
Sbjct:   124 KGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTT 183

Query:   140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             G GAA +TANV+ G TV +FG G++GL+V +GA+L GA++II +D+ ++K +   +FG T
Sbjct:   184 GFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGAT 243

Query:   200 EFVNSKN--CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
             +FVN K     D+++ + +I+MTDGG D+ F+C G   ++++A   C KGWG++I++GV 
Sbjct:   244 DFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIGVA 303

Query:   258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
               G ++S   F+++ +G++  GS FGG+K +S++  L+K Y    L++++F+TH   F+E
Sbjct:   304 AAGEEISTRPFQLV-TGRVWKGSAFGGIKGRSEMGGLIKDYQKGALKVEEFITHRRPFKE 362

Query:   318 INSAFDLLIKGKCLRCVI 335
             IN AF+ L  G CLR V+
Sbjct:   363 INQAFEDLHNGDCLRTVL 380

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;IMP;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0033833 "hydroxymethylfurfural reductase (NADH) activity" evidence=IMP

GO:0033859 "furaldehyde metabolic process" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0000947 "amino acid catabolic process to alcohol via Ehrlich pathway" evidence=IGI

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0046294 "formaldehyde catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;IDA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 146/329 (44%), Positives = 200/329 (60%)

Query:    16 QCRAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF- 74
             +    FPRILGHEA+                   IP F  +C EC  C+ ++ NLC  + 
Sbjct:    60 EAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYH 119

Query:    75 --PFK---ISPWMPRDQTSRFKD---LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 126
               P K   ++    R  T+  KD    + + I+HF++ S+F+EYTVLD A VVK+DP  P
Sbjct:   120 VDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSP 179

Query:   127 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186
               +  LLSCGVSTGVGAAW  ANV+ G +  +FGLGS+GLAVAEGAR  GA+RIIGVD  
Sbjct:   180 LKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDAN 239

Query:   187 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 246
             + KFE GK  GVT+F+N K+   K V Q+I ++T GG DY FEC G   +++EA+     
Sbjct:   240 ASKFEKGKLMGVTDFINPKDL-TKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHV 298

Query:   247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELD 306
             GWG T+++G+      L L   E L  G+ + GS+FGG K KS +P   ++ M   ++L+
Sbjct:   299 GWGSTVLVGIYPTPRTLPLHPME-LFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLE 357

Query:   307 KFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
              F+T+E+ FE+IN AF LL  GK LRC++
Sbjct:   358 PFITNELPFEKINDAFQLLRDGKSLRCIL 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4539	0.9203	0.8342	yes	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5047	0.9292	0.8267	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4447	0.9262	0.8395	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4476	0.9203	0.8342	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4294	0.9321	0.8337	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4444	0.9203	0.8342	yes	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.4378	0.9410	0.8264	yes	no
Q9FH04	ADHL7_ARATH	1, ., 1, ., 1, ., 1	0.7663	0.9439	0.8205	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4656	0.9321	0.8337	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.1	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015544001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (354 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00036847001	SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (485 aa)						•			0.899
	GSVIVG00035907001	SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa)						•			0.899
	GSVIVG00034061001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (450 aa)						•			0.899
	GSVIVG00028844001	SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa)						•			0.899
	GSVIVG00024617001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (485 aa)						•			0.899
	GSVIVG00024065001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa)						•			0.899
	GSVIVG00020768001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (531 aa)						•			0.899
	GSVIVG00019283001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (549 aa)						•			0.899
	GSVIVG00016425001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (362 aa)						•			0.899
	GSVIVG00016121001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (511 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-175
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-137
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-135
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-126
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-119
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-114
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-110
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-109
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-108
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-102
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	6e-72
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	5e-69
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	4e-67
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-56
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-45
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-44
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	5e-43
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	4e-38
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	7e-38
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-35
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-35
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-35
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	5e-35
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-33
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-33
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	3e-33
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	5e-33
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	6e-33
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	6e-31
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-29
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	3e-28
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-27
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	9e-27
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-26
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	4e-26
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	6e-25
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-24
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-23
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	6e-23
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-22
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-21
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-21
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-21
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-20
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-20
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-19
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	6e-19
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-18
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-17
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-17
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-16
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-16
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-16
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	7e-16
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	7e-16
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-14
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-14
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	3e-13
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-12
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-12
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	5e-11
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	7e-11
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-10
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-10
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	6e-10
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-09
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	2e-09
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	8e-09
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	8e-09
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-08
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-08
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-08
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-07
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-07
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-07
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	6e-07
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	8e-07
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-05
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	6e-05
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	6e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-04
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	2e-04
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-04
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-04
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	3e-04
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-04
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	4e-04
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	0.002

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  489 bits (1260), Expect = e-175
 Identities = 170/319 (53%), Positives = 220/319 (68%), Gaps = 4/319 (1%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
            +FPRILGHEA G+VESVGE V  +  GD V+P F  +C EC  C+S+K N+C       
Sbjct: 54  PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINT 113

Query: 79  SPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
               M  D  SRF    G+ I+HFV  S+FSEYTV+ +  V K++P  P ++ CLLSCGV
Sbjct: 114 DRGVMINDGKSRFSI-NGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGV 172

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STG+GAAW  A V+ GSTV IFGLG++GLAVAEGAR+ GA+RIIGVD+   KFE  K+FG
Sbjct: 173 STGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFG 232

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
           VTEFVN K+  DK V ++I +MT GG DY FEC G    +  A+ C   GWG T++LGV 
Sbjct: 233 VTEFVNPKDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVP 291

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
              +  S     +L+ G+ L G+LFGG K K+D+P L+++YM KELEL+KF+THE+ F E
Sbjct: 292 HKDAVFSTHPMNLLN-GRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSE 350

Query: 318 INSAFDLLIKGKCLRCVIW 336
           IN AFDLL+KG+CLRC++ 
Sbjct: 351 INKAFDLLLKGECLRCILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  393 bits (1011), Expect = e-137
 Identities = 162/317 (51%), Positives = 217/317 (68%), Gaps = 5/317 (1%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
            +FP ILGHE  G+VESVGE V  +  GD VIP F+  C EC  CRS K NLC  +    
Sbjct: 53  TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANE 112

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           S  MP D TSRF   +G+ I+HF+  S+FS+YTV+D  +V K+DP  P    CLL CG S
Sbjct: 113 SGLMP-DGTSRFT-CKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFS 170

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TG GAAW TA VE GSTV +FGLG++GL+   GA++ GA+RIIGVD+  +KFE  K FG 
Sbjct: 171 TGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGA 230

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+F+N K+  DK VS++I +MT GG DY FEC G A L+ EA    + GWG ++V+GV  
Sbjct: 231 TDFINPKDS-DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGV-P 288

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PG++LS+  F+++  G+   GS FGG K++SD+P L+ +YM+K+ +LD+ +TH + FEEI
Sbjct: 289 PGAELSIRPFQLI-LGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEI 347

Query: 319 NSAFDLLIKGKCLRCVI 335
           N  FDL+  G+C+R VI
Sbjct: 348 NKGFDLMKSGECIRTVI 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  387 bits (997), Expect = e-135
 Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 15/322 (4%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           +FP ILGHE  G+VESVGE V  V  GD VIP +  +C EC  C+S K NLC     KI 
Sbjct: 55  LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQ----KIR 110

Query: 80  PW-----MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL-DIAHVVKVDPTVPPNRACLL 133
                  MP D TSRF   +G+ I+HF+  S+FSEYTV+ +I+ V K++P  P ++ CLL
Sbjct: 111 ATQGKGLMP-DGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEIS-VAKINPEAPLDKVCLL 167

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            CGV+TG GA   TA VE GSTV +FGLG++GLAV +GA+  GA+RIIG+D+  +KFE+ 
Sbjct: 168 GCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA 227

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           K+FG T+ VN K+  DK + Q++++MTDGG DY FEC+G   +++ A   C KGWG +++
Sbjct: 228 KKFGATDCVNPKDH-DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVI 286

Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           +GV   G ++S   F+ L +G++  G+ FGG K++S +P L++ YM  ++++D+F+TH M
Sbjct: 287 IGVAAAGQEISTRPFQ-LVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTM 345

Query: 314 KFEEINSAFDLLIKGKCLRCVI 335
             +EIN AFDL+  GK +R V+
Sbjct: 346 PLDEINEAFDLMHAGKSIRTVV 367

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  366 bits (941), Expect = e-126
 Identities = 165/320 (51%), Positives = 213/320 (66%), Gaps = 8/320 (2%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAF---PF 76
            +PRILGHEA G+VESVGE V+ +  GD VIP F  +C +C  C+  K NLC  +   PF
Sbjct: 64  AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPF 123

Query: 77  KISPWMPRDQTSRFKDLR-GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
           K    M  D  +RF     G+ I+HF++ S+F+EYTVLD A VVK+DP  P  +  LLSC
Sbjct: 124 KSV--MVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSC 181

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
           GVSTGVGAAW TANV+ GS+V IFGLG++GLAVAEGAR  GA++IIGVD+  EKFE GK 
Sbjct: 182 GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
            G+T+F+N K+  DK V + I +MT GG DY FEC G   +++EA+     GWG T++LG
Sbjct: 242 MGITDFINPKDS-DKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLG 300

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
           +      L L   E L  G+ + GS+FG  K KS +P L K+ M   + LD F+THE+ F
Sbjct: 301 IHPTPKMLPLHPME-LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF 359

Query: 316 EEINSAFDLLIKGKCLRCVI 335
           E+IN AF LL  GK LRC++
Sbjct: 360 EKINEAFQLLEDGKALRCLL 379

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  347 bits (892), Expect = e-119
 Identities = 159/322 (49%), Positives = 220/322 (68%), Gaps = 3/322 (0%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
           + +A+FPRI GHEA G+VES+GE V    +GD V+  F  +C  C  C S K N+C    
Sbjct: 58  ESQALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLG 117

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
            +    M  DQ +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSC
Sbjct: 118 LERKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSC 176

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
           GV+ G+GAAW  A+V  GS+VVIFGLG++GL+VA+GA+L GA++IIGVD+  EK E  K 
Sbjct: 177 GVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT 236

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           FGVT+F+N  +   + + Q+I  MT GGADY FECVG   +   A   C  GWG T+ LG
Sbjct: 237 FGVTDFINPNDL-SEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLG 295

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
           V +   ++S + + +  SG+ L GSLFGG K KSD+P L+ +YM+KE+ +D+F+TH + F
Sbjct: 296 VPKAKPEVS-AHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF 354

Query: 316 EEINSAFDLLIKGKCLRCVIWM 337
           +EIN AF+L+ +GKCLRCVI M
Sbjct: 355 DEINKAFELMREGKCLRCVIHM 376

Length = 378

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  334 bits (860), Expect = e-114
 Identities = 143/315 (45%), Positives = 197/315 (62%), Gaps = 5/315 (1%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP +LGHE  G+VE+VGE V  V  GD VI  F  +C +C  C S K NLC A       
Sbjct: 55  FPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGK 114

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
               D T+R     G  ++H++  S+F+EYTV+    +VK+DP  P  +ACLL CGV+TG
Sbjct: 115 GTMPDGTTRLSG-NGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTG 173

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           +GA   TA VE G TV +FGLG +GLA  +GA+  GA RII VD+  EK E+ K+FG T 
Sbjct: 174 IGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATH 233

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
           FVN K   D  V + I+++TDGGADY FECVG   ++++A     +  G ++++GV   G
Sbjct: 234 FVNPKEVDD--VVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAG 290

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            ++S   F+ L +G++  GS FGG + +SDIP L+  YM  +L LD+ VTH +  E+IN 
Sbjct: 291 QEISTRPFQ-LVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINE 349

Query: 321 AFDLLIKGKCLRCVI 335
           AFDL+ +GK +R VI
Sbjct: 350 AFDLMHEGKSIRSVI 364

Length = 366

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  326 bits (838), Expect = e-110
 Identities = 136/317 (42%), Positives = 192/317 (60%), Gaps = 3/317 (0%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
             FP ILGHEA G+VESVGE V  V  GD VIP F+  C +C  C + + NLC       
Sbjct: 58  TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGK 117

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
              + +D TSRF   +G+ IHHF+  S+FSEYTV+D   V K+D   P  + CL+ CG S
Sbjct: 118 PQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFS 176

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TG GAA  TA V  GST  +FGLG +GL+   G +  GA+RII VD+  +KF   K  G 
Sbjct: 177 TGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGA 236

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           TE +N ++   K + +++ +MTDGG D+ FE +G    ++ A A C +G+G ++++GV  
Sbjct: 237 TECINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPP 295

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
               LS++   +L +G+   G++FGG K+K  +P L+  YM K+  LD  +TH + FE+I
Sbjct: 296 SSQNLSINPMLLL-TGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKI 354

Query: 319 NSAFDLLIKGKCLRCVI 335
           N  FDLL  GK +R V+
Sbjct: 355 NEGFDLLRSGKSIRTVL 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  321 bits (825), Expect = e-109
 Identities = 148/318 (46%), Positives = 210/318 (66%), Gaps = 3/318 (0%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           VFP ILGHE  G+VE+VGE V  V  GD VIP + A+C EC  C S K NLC A      
Sbjct: 54  VFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQG 113

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
             +  D TSRF    G+ I+H++  S+FSEYTV+    + K++P  P    CLL CGV+T
Sbjct: 114 KGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTT 172

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
           G+GA   TA VE G TV +FGLG IGL+V +GAR+  A+RII +D+   KFE+ K+ G T
Sbjct: 173 GIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGAT 232

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
           + VN  +  DK + ++I+++TDGG DY FEC+G  ++++ A  CC KGWG++I++GV   
Sbjct: 233 DCVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA 291

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
           G ++S   F+ L +G++  GS FGG+K ++++P ++++YM  E+ LD FVTH M  E+IN
Sbjct: 292 GQEISTRPFQ-LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDIN 350

Query: 320 SAFDLLIKGKCLRCVIWM 337
            AFDL+ +GK +R VI  
Sbjct: 351 EAFDLMHEGKSIRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  318 bits (818), Expect = e-108
 Identities = 133/316 (42%), Positives = 195/316 (61%), Gaps = 5/316 (1%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS-AFPFKIS 79
            P ILGHE  G+VES+G  V  +  GD VIP F   C +C  C + + NLCS +      
Sbjct: 53  LPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGR 112

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
             M  D TSRF   +G+ IHHF+  S+F+EYTV+    + K+DP  P  + CL+ CG ST
Sbjct: 113 GLMS-DGTSRFT-CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFST 170

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
           G GAA  TA V  GST  +FGLG +GL+V  G +  GA+RII VD+  +KFE  K+ G T
Sbjct: 171 GYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGAT 230

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
           E +N ++  DK + +++ +MTDGG DY FE +G A  +++A    R G G ++V+GV   
Sbjct: 231 ECINPRD-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS 289

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
           G++ +L   ++L +G+ + G++FGG K+K  +P L+  Y  K+  LD+ +TH + FEEIN
Sbjct: 290 GTEATLDPNDLL-TGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEIN 348

Query: 320 SAFDLLIKGKCLRCVI 335
             FDL+  G+ +R ++
Sbjct: 349 DGFDLMRSGESIRTIL 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  303 bits (779), Expect = e-102
 Identities = 135/316 (42%), Positives = 180/316 (56%), Gaps = 7/316 (2%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P +LGHE  GVVE VG  V GV  GD V+  ++  C  C  C   + NLC      I  
Sbjct: 53  LPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILG 111

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
               D T RF    GE +     + +F+EYTV+  A VVK+D  +P +RA LL CGV+TG
Sbjct: 112 GQLPDGTRRF-TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTG 170

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           VGA   TA V  G TV + G G +GL   +GAR+ GA+RII VD + EK E+ +RFG T 
Sbjct: 171 VGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATH 230

Query: 201 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
            VN+    +    + + D+TDG GADY FE VG A+ +++A A  RKG G  +V+G+  P
Sbjct: 231 TVNA---SEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPP 286

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
           G  +SL + E+  S K L GSL+G    + DIP LL  Y    L+LD+ VT     +EIN
Sbjct: 287 GETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEIN 346

Query: 320 SAFDLLIKGKCLRCVI 335
            AF  ++ G+  R VI
Sbjct: 347 EAFADMLAGENARGVI 362

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  227 bits (580), Expect = 6e-72
 Identities = 114/314 (36%), Positives = 163/314 (51%), Gaps = 5/314 (1%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P  LGHEA GVV  VGE V  +  GD V+  F+  C  C  C   +  LC          
Sbjct: 62  PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
                  R + LRG  I+H + VS+F+EY V+    VVK+D  VP   A L  C V TGV
Sbjct: 122 TLLSGGRRLR-LRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV 180

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
           GA   TA V  G +V + GLG +GL+   GA   GA++++ VD+  +K  + +  G T  
Sbjct: 181 GAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT 240

Query: 202 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 261
           VN+   GD +  + + ++T GG DY FE  G    ++ AY   R+G G T+  G+  P +
Sbjct: 241 VNA---GDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEA 296

Query: 262 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 321
           +LS+ +  ++   + L GS  G    + DIP  L  Y+   L +DK +TH +  +EIN  
Sbjct: 297 RLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEG 356

Query: 322 FDLLIKGKCLRCVI 335
           FD L  G+ +R VI
Sbjct: 357 FDRLAAGEAVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  219 bits (561), Expect = 5e-69
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 10/319 (3%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           +P + GHE  GVV  VG  V GV  GD V+  F+  C  C  C +   NLC      ++ 
Sbjct: 55  YPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTG 114

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
               D T RF    G+ +     + +FSEYTV+  A VVK+D  +P ++ACL+ CGV TG
Sbjct: 115 SQISDGTYRFH-ADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTG 173

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A+V  G TVV+ G+G +G+   +GA + GA ++I VD +  K E   +FG T 
Sbjct: 174 WGSAVNIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATH 233

Query: 201 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--SLVQEAYACCRKGWGKTIVLGVD 257
              S     +   Q++ ++T+G GAD     VG      + EA +  RKG G+ +V G+ 
Sbjct: 234 AFASM----EEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLG 288

Query: 258 QPG-SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
                 + ++ FE+    K L G+LFGG   ++DIP LL+ Y   +L+LD+ +T     +
Sbjct: 289 PMADVDVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLD 348

Query: 317 EINSAFDLLIKGKCLRCVI 335
           +IN  +  ++ GK +R VI
Sbjct: 349 QINEGYQDMLDGKNIRGVI 367

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  214 bits (548), Expect = 4e-67
 Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 9/317 (2%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC-SAFPFKIS 79
            P +LGHE  GVVE+VG  V G+  GD V+  F A C EC  C S     C + FP   S
Sbjct: 55  LPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFS 113

Query: 80  PWMPRDQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
              P D ++      G  +H HF   SSF+ Y V+   +VVKVD  VP      L CG+ 
Sbjct: 114 GRRP-DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQ 172

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TG GA         GS++ +FG G++GLA    A++ G T II VD++  + E+ K  G 
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T  +N K   ++ +   I ++T GG DY  +  G+ +++++A        G   ++G   
Sbjct: 233 THVINPK---EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPP 288

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
           PG++++L   ++L SGK + G + G    +  IP L++ Y   +   DK VT    FE+I
Sbjct: 289 PGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF-YPFEDI 347

Query: 319 NSAFDLLIKGKCLRCVI 335
           N A      GK ++ V+
Sbjct: 348 NQAIADSESGKVIKPVL 364

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  186 bits (475), Expect = 2e-56
 Identities = 109/316 (34%), Positives = 157/316 (49%), Gaps = 14/316 (4%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP +LGHEA GVVE+VGE V  V  GD V+ ++ A C +C  C+  +   C         
Sbjct: 54  FPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC--------- 104

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
           +   + T +     G  +   + + +F+E T++      KVDP   P  A LL CGV  G
Sbjct: 105 FDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAG 164

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           +GAA  T  V+ G +V + G G +G A   GA L GA++II VD+   K E  + FG T 
Sbjct: 165 LGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATH 224

Query: 201 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
            VNS   G   V + I  +T G GAD   + VG     ++A+   R   G  +++GV  P
Sbjct: 225 TVNSS--GTDPV-EAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTP 280

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
              L L   +V   G  L  S +G    + D P+L+  Y+   L LD FVT  +  +++ 
Sbjct: 281 DMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVE 340

Query: 320 SAFDLLIKGKCLRCVI 335
            AFD +  G  LR V+
Sbjct: 341 EAFDKMHAGDVLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  156 bits (396), Expect = 1e-45
 Identities = 72/279 (25%), Positives = 107/279 (38%), Gaps = 35/279 (12%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
               P ILGHE  GVV  VG  V GV  GD V+      C  C  CR             
Sbjct: 26  PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG------ 79

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                               I        F+EY V+   ++V +   +    A LL   +
Sbjct: 80  --------------------ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPL 119

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           +T   A  R   ++ G TV++ G G +GL  A+ A+  GA R+I  D   EK E+ K  G
Sbjct: 120 ATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELG 178

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
               ++ K   ++ + + +     GGAD   + VG    + +A    R G G+ +V+G  
Sbjct: 179 ADHVIDYK---EEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGT 234

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK 296
             G         +L     ++GS  G  +   D    L 
Sbjct: 235 -SGGPPLDDLRRLLFKELTIIGSTGGTRE---DFEEALD 269

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  156 bits (395), Expect = 1e-44
 Identities = 85/319 (26%), Positives = 130/319 (40%), Gaps = 27/319 (8%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
             ILGHE +G V  VG  V G   GD V+      C  C  CR+ + NLC    F     
Sbjct: 56  DIILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
           +          + G           F+EY  +     +   P      A  L+  ++T  
Sbjct: 115 L-------GGGIDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAY 157

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
                 A V  G TVV+ G G IGL     A+L GA+ +I VD   E+ E+ K  G  + 
Sbjct: 158 HGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADV 217

Query: 202 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
           V +    +      I+++T G GAD   E VG    + +A    R G G  +V+GV   G
Sbjct: 218 VVNP--SEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVY-GG 273

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             + L +  V+     L GSL      + D    L      +++ +K +TH +  ++   
Sbjct: 274 EDIPLPAGLVVSKELTLRGSLRPS--GREDFERALDLLASGKIDPEKLITHRLPLDDAAE 331

Query: 321 AFDLLIKGK--CLRCVIWM 337
           A++L    K   ++ V+  
Sbjct: 332 AYELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  152 bits (385), Expect = 5e-43
 Identities = 97/324 (29%), Positives = 151/324 (46%), Gaps = 15/324 (4%)

Query: 20  VFPR--ILGHEAIGVVESVGENVDGVV---EGDVVIPHFLADCTECVGCRSKKGNLC-SA 73
            FP   +LGHE  G V  VG NV+       GD V+  F+  C +C  C   K NLC   
Sbjct: 50  PFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDF 109

Query: 74  FPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
           F +        D T+R   L G  ++ + S+   +EY V+    +  +  ++    + +L
Sbjct: 110 FAYNRLKGTLYDGTTRLFRLDGGPVYMY-SMGGLAEYAVVPATALAPLPESLDYTESAVL 168

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            C   T  GA    A+V  G TV + G+G +G +  + A+  GA+ II VDV  EK    
Sbjct: 169 GCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA 228

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 252
           K  G T  VN+    D      I ++T G G D   E +G     + A    R G G+ +
Sbjct: 229 KELGATHTVNAAK-ED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAV 284

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHE 312
           V+G+   G+   +    ++  G  ++GS   G + + D+P L+      +L+ +  VTH+
Sbjct: 285 VVGLAPGGATAEIPITRLVRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHK 342

Query: 313 MKFEEINSAFDLLIKGKC-LRCVI 335
            K EEIN A++ L KG    R ++
Sbjct: 343 YKLEEINEAYENLRKGLIHGRAIV 366

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  138 bits (350), Expect = 4e-38
 Identities = 89/330 (26%), Positives = 141/330 (42%), Gaps = 46/330 (13%)

Query: 11  AGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKG 68
            G+     A  P + GHE  GVV +VG  V G   GD   V P+    C EC  CR  + 
Sbjct: 45  EGEFG---AAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIY--CGECFYCRRGRP 99

Query: 69  NLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPN 128
           NLC                       G T +       F+EY V+    V K+   +   
Sbjct: 100 NLCENL-----------------TAVGVTRN-----GGFAEYVVVPAKQVYKIPDNLSFE 137

Query: 129 RACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185
            A L   LSC V            ++ G +V++FG G IGL +A+  +L GA+R+   + 
Sbjct: 138 EAALAEPLSCAVH-----GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEP 192

Query: 186 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
             EK E+ K+ G TE V+      +   +   +    G D   E  G+   +++A    R
Sbjct: 193 NEEKLELAKKLGATETVD----PSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYAR 248

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELEL 305
           +G G  +V GV  P +++S+S FE+      ++GS F           LL+     ++++
Sbjct: 249 RG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGS-FINPYTFPRAIALLES---GKIDV 303

Query: 306 DKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
              V+H +  EE+  A + +  G  L+ V+
Sbjct: 304 KGLVSHRLPLEEVPEALEGMRSGGALKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  137 bits (348), Expect = 7e-38
 Identities = 89/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P  LGHE  G V  VG  V     GD V    +  C  C  CR  +GNLC          
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC---------- 106

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
              +Q      + G           F+EY V+    +V V   VP  +A + +  V T  
Sbjct: 107 --LNQGMPGLGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPY 154

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
            A  R   V+ G TV++ GLG +GL   + A+  GA  +I VD+  EK E+ K  G  E 
Sbjct: 155 HAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEV 213

Query: 202 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 261
           +NS    D S          GG D  F+ VG     ++A    + G G+ +V+G+ +   
Sbjct: 214 LNSL---DDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKL 269

Query: 262 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 321
            + LS          ++GS FGG     D+P +L      +L            +EI   
Sbjct: 270 TVDLSDLIARE--LRIIGS-FGGT--PEDLPEVLDLIAKGKL---DPQVETRPLDEIPEV 321

Query: 322 FDLLIKGK 329
            + L KGK
Sbjct: 322 LERLHKGK 329

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  131 bits (332), Expect = 2e-35
 Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 42/313 (13%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPF 76
           A +PRILGHE  G V  VGE V G+  GD  VV P+    C EC  CR  + N C     
Sbjct: 51  ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCE---- 104

Query: 77  KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
            +              + G  +H       F+EY V+    ++  +  +  ++A L+   
Sbjct: 105 NLQ-------------VLG--VH---RDGGFAEYIVVPADALLVPE-GLSLDQAALVEP- 144

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           ++ G  A  R A V  G TV++ G G IGL V + A+  GA R+I VD+  E+ E  +  
Sbjct: 145 LAIGAHAVRR-AGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFAREL 202

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G  + +N    GD+ V+  + ++TDG GAD   +  G  + ++EA      G G+ +++G
Sbjct: 203 GADDTINV---GDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVG 258

Query: 256 VDQPGSQLSLSSFEVLHSGKI-LMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 314
           + +         F   H  ++ ++GS       + D P ++      +++ +  +TH   
Sbjct: 259 LSKGPVTFPDPEF---HKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFP 312

Query: 315 FEEINSAFDLLIK 327
           FE++  AFDL   
Sbjct: 313 FEDVPEAFDLWEA 325

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  131 bits (332), Expect = 2e-35
 Identities = 84/324 (25%), Positives = 135/324 (41%), Gaps = 45/324 (13%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           PRILGHE  G +  VG+ V G   GD V       C EC  C     N+C          
Sbjct: 54  PRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMC---------- 103

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTV-----LDIAHVVKVDPTVPPNRACL---L 133
                     + +            F+EY       +    V+K+   V    A L   L
Sbjct: 104 ---------PNYKKFGNL---YDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPL 151

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
           +C +      A R A ++ G TV++ G G IGL  A  A+  GA ++I  D+   + E  
Sbjct: 152 ACCI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA 206

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 252
           K+ G    +++    ++ + + + ++TDG GAD      G      +A    RKG G+ +
Sbjct: 207 KKLGADYTIDA---AEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRIL 262

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS-DIPILLKRYMDKELELDKFVTH 311
             G    GS +++    ++H  +I   ++ G   A   D    L+     ++++   +TH
Sbjct: 263 FFGGLPKGSTVNI-DPNLIHYREI---TITGSYAASPEDYKEALELIASGKIDVKDLITH 318

Query: 312 EMKFEEINSAFDLLIKGKCLRCVI 335
               E+I  AF+L   GK L+ VI
Sbjct: 319 RFPLEDIEEAFELAADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  130 bits (330), Expect = 2e-35
 Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 39/310 (12%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
            P I GHE +G V  VGE V G+  GD V +   +  C EC  CRS   NLC        
Sbjct: 57  LPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLC-------- 108

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
                      + + G T         ++EY V+   +VVK+   +    A  L C   T
Sbjct: 109 ---------PNQKITGYTTD-----GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT 154

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
              A  + ANV+ G  V + G G +G    + A+  GA  +I +    EK E+ K+ G  
Sbjct: 155 TYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGAD 212

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
             +NS    D    + +       AD   + VG  + ++ +    R+G G  +++G+   
Sbjct: 213 HVINSS---DSDALEAV----KEIADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGG 263

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
           G    L +F ++     ++GSL G      D+   L      E ++   +   +  +EIN
Sbjct: 264 GPIPLLPAFLLILKEISIVGSLVGTRA---DLEEALD--FAAEGKIKPEILETIPLDEIN 318

Query: 320 SAFDLLIKGK 329
            A++ + KGK
Sbjct: 319 EAYERMEKGK 328

Length = 339

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  130 bits (329), Expect = 5e-35
 Identities = 87/329 (26%), Positives = 129/329 (39%), Gaps = 31/329 (9%)

Query: 18  RAVFPRILGHEAIGVVESVGENVD------GVVEGD-VVIPHFLADCTECVGCRSKKGNL 70
           R   P ILGHE +G V ++G  V        +  GD V        C  C  C       
Sbjct: 51  RVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTK 109

Query: 71  C-SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVDPTVPPN 128
           C +   +                L G           ++E+  L     +V+V   VP  
Sbjct: 110 CENRKKYGHEASCDDPH------LSG----------GYAEHIYLPPGTAIVRVPDNVPDE 153

Query: 129 RACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187
            A   +C ++T V AA   A  V  G TVV+ G G +GL     A+L GA R+I +D   
Sbjct: 154 VAAPANCALAT-VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSP 212

Query: 188 EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 246
           E+ E+ + FG    ++     D     I+ D+T G GAD   E  G  + V E     R+
Sbjct: 213 ERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRR 272

Query: 247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELD 306
           G G  +++G   P   + L    ++     ++G               L+R  D+     
Sbjct: 273 G-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFP-FA 330

Query: 307 KFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
           + VTH    E+IN A +L   G  L+ VI
Sbjct: 331 ELVTHRYPLEDINEALELAESGTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  125 bits (317), Expect = 2e-33
 Identities = 86/323 (26%), Positives = 130/323 (40%), Gaps = 33/323 (10%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
            A    ILGHE +G V  VG +V  +  GD V    +  C  C  CR      C    + 
Sbjct: 51  GAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWG 110

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSC 135
                         D               +EY  +  A  ++ K+   +P   A +LS 
Sbjct: 111 WKL-------GNRID------------GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSD 151

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
            + TG   A   A ++ GSTV + G G +GL    GARL GA RII VD   E+ ++ K 
Sbjct: 152 ILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE 210

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
            G T+ +N KN     + + I+++T G G D   E VG     ++A    R G G    +
Sbjct: 211 AGATDIINPKNG---DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANV 266

Query: 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 314
           GV            E             G +  ++ +P LL    + +++  K +TH   
Sbjct: 267 GVYG-KPDPLPLLGEWFGKNLTFKT---GLVPVRARMPELLDLIEEGKIDPSKLITHRFP 322

Query: 315 FEEINSAFDLLIKGK--CLRCVI 335
            ++I  A+ L       C++ VI
Sbjct: 323 LDDILKAYRLFDNKPDGCIKVVI 345

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  125 bits (316), Expect = 2e-33
 Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 33/313 (10%)

Query: 24  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 83
           I GHE  GVV +VG  V     GD V+ +    C  C  CR     LC++          
Sbjct: 57  IPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG---- 112

Query: 84  RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 143
                   +  G            +EY ++    ++ +   +      LL CG+ T    
Sbjct: 113 -------WNRDG----------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YH 154

Query: 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 203
           A R   V    TV++ G G +GL     AR  GA  +IGVD   E+ E+ K  G    +N
Sbjct: 155 ALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVIN 214

Query: 204 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 263
           S   G   V +I    +  GAD   EC G  +  + A    R  WG+ +++G    G +L
Sbjct: 215 S---GQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGE---GGEL 267

Query: 264 SLS-SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAF 322
           ++  S +++   + L+GS +  +    +    L R+   +LE+D+ VTH    ++   A+
Sbjct: 268 TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARH---KLEVDRLVTHRFGLDQAPEAY 324

Query: 323 DLLIKGKCLRCVI 335
            L  +G+  + V 
Sbjct: 325 ALFAQGESGKVVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  125 bits (317), Expect = 3e-33
 Identities = 89/317 (28%), Positives = 133/317 (41%), Gaps = 48/317 (15%)

Query: 23  RILGHEAIGVVESVGENVDGVVEGD-VVIPHFLAD--CTECV-GCRSKKGNLCSAFPFKI 78
            ILGHEA+GVVE VG  V     GD V++P    D        G  S+ G +   + F  
Sbjct: 55  MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF-- 112

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT-VLDI-AHVVKVDPTVPPNRACLLSCG 136
                    S FKD              F+EY  V D  A++  +   +   +A +L   
Sbjct: 113 ---------SNFKD------------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDM 151

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           +STG   A   AN+++G TV +FG+G +GL    GARL GA RII V     + E+ K +
Sbjct: 152 MSTGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEY 210

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G T+ V+ KN     V + I+ +T G G D      G     ++A    + G G    + 
Sbjct: 211 GATDIVDYKNG---DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVN 266

Query: 256 VDQPGSQL--SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD----KELELDKFV 309
                  L      + V    K + G L  G + +      ++R         ++  K +
Sbjct: 267 YYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLR------MERLASLIEYGRVDPSKLL 320

Query: 310 TH-EMKFEEINSAFDLL 325
           TH    F++I  A  L+
Sbjct: 321 THHFFGFDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  125 bits (317), Expect = 5e-33
 Identities = 91/358 (25%), Positives = 145/358 (40%), Gaps = 76/358 (21%)

Query: 24  ILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 82
           ILGHE +GVVE VG  V  +  GD VV+P  +A C EC  C+    + C           
Sbjct: 57  ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIA-CGECFYCKRGLYSQC----------- 104

Query: 83  PRDQTSRFKDLRGETIHHFVSVSSFS-----------EYTVLDIAHV--VKVDPTVPPNR 129
             D T+   ++     H    +  +S           EY  +  A V   K+   +   +
Sbjct: 105 --DNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEK 162

Query: 130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 189
           A  LS  + TG  AA   A V+ G TV ++G G +GL  A  A+L GA R+I +D + E+
Sbjct: 163 ALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPER 221

Query: 190 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL--------------- 233
            E+ +     E +N +      V + + ++T G G D C + VG+               
Sbjct: 222 LEMARSHLGAETINFEEV--DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALL 279

Query: 234 ------ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF----- 282
                    ++EA    RKG G   ++GV                  K  +G+       
Sbjct: 280 KLETDRPDALREAIQAVRKG-GTVSIIGVYGGTVN------------KFPIGAAMNKGLT 326

Query: 283 ---GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVI 335
              G    +  +P LL+     EL+    +TH +  E+   A+ +  K +  C++ V+
Sbjct: 327 LRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVL 384

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  124 bits (314), Expect = 6e-33
 Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 45/322 (13%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFP 75
               P +LGHE  G VE VG  VD +  GD   V P  L  C +C  C+  + +LCS + 
Sbjct: 49  AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNP--LLPCGKCEYCKKGEYSLCSNY- 105

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
                           D  G          +F+EY  +   +++K+   V    A ++  
Sbjct: 106 ----------------DYIGSRRD-----GAFAEYVSVPARNLIKIPDHVDYEEAAMIE- 143

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
             +  + A    A + +G TVV+ G G+IGL   +  ++ GA R+I VD+  EK  + + 
Sbjct: 144 PAAVALHAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE 202

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
            G  + +N K    + V     ++T+G GAD   E  G  + +++A A  R G GK +++
Sbjct: 203 LGADDTINPKEEDVEKVR----ELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLV 257

Query: 255 GVDQPGSQLSLSSFE-VLHSGKILMGS------LFGGLKAKSDIPILLKRYMDKELELDK 307
           G+      LS  +FE +L     + GS       F G + ++ + +L    +     ++ 
Sbjct: 258 GIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK----VEP 313

Query: 308 FVTHEMKFEEINSAFDLLIKGK 329
            +TH +  E+  +AF+ L   +
Sbjct: 314 LITHRLPLEDGPAAFERLADRE 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  119 bits (300), Expect = 6e-31
 Identities = 79/329 (24%), Positives = 125/329 (37%), Gaps = 48/329 (14%)

Query: 10  TAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKK 67
           T G P       P  LGHE  GVV  VG  V G   GD  VV P     C  C  C+   
Sbjct: 53  TEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTI--KCGTCGACKRGL 110

Query: 68  GNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS--FSEYTVLDIAHVVKVDPTV 125
            NLC +  F                         +      F+EY V+   HV K+   V
Sbjct: 111 YNLCDSLGF-----------------------IGLGGGGGGFAEYVVVPAYHVHKLPDNV 147

Query: 126 PPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 182
           P   A L   L+         A R +  + G T ++ G G IGL      +  GA++II 
Sbjct: 148 PLEEAALVEPLAVAWH-----AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIV 202

Query: 183 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 241
            +    + E+ +  G T  ++        V   +  +T G G D  F+C G+ + +  A 
Sbjct: 203 SEPSEARRELAEELGATIVLDPTEVD---VVAEVRKLTGGGGVDVSFDCAGVQATLDTAI 259

Query: 242 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 301
              R   G  + + +      +S +  +++   K L GS+      + D   ++      
Sbjct: 260 DALRPR-GTAVNVAI--WEKPISFNPNDLVLKEKTLTGSI---CYTREDFEEVIDLLASG 313

Query: 302 ELELDKFVTHEMKFEEI-NSAFDLLIKGK 329
           +++ +  +T  +  E+I    F+ LI  K
Sbjct: 314 KIDAEPLITSRIPLEDIVEKGFEELINDK 342

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (289), Expect = 2e-29
 Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 27/228 (11%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P + GHE  GVV  VGE+V     GD V   F+  C  C  CR+   N+C          
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC---------- 104

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV--VKVDPTVPPNRACLLSCGVST 139
               Q              F    SF+EY  +  A V  V++   V    A  L C  +T
Sbjct: 105 --EHQV----------QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFAT 152

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
              A    A V+ G  V + G G +GL+    A   GA R+I VD+  +K E+ +  G  
Sbjct: 153 AFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAV 211

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 247
             VN+     + V+  + D+T GGA    + +G+    + + A  RK 
Sbjct: 212 ATVNAS--EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR 257

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  111 bits (281), Expect = 3e-28
 Identities = 92/330 (27%), Positives = 134/330 (40%), Gaps = 59/330 (17%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNLCSAFPF 76
           P +LGHE+ G V +VG  V  +  GD V     +P     C  C  C+S + NLC    F
Sbjct: 55  PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCPDMRF 109

Query: 77  KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---L 133
             +P  P D T                      Y         K+   V      L   L
Sbjct: 110 AATP--PVDGT-------------------LCRYVNHPADFCHKLPDNVSLEEGALVEPL 148

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
           S GV      A R A V  G TV++FG G IGL  A  A+  GAT+++  D+   + E  
Sbjct: 149 SVGV-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA 203

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEA-YACCRKGWGKT 251
           K  G T  VN +       ++ I ++  G G D   EC G  S +Q A YA    G   T
Sbjct: 204 KELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGG---T 260

Query: 252 IVL-GVDQPGSQL---SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDK 307
           +VL G+ +P   L   + S  E+          + G  +  +  P  ++     ++++  
Sbjct: 261 VVLVGMGKPEVTLPLSAASLREI---------DIRGVFRYANTYPTAIELLASGKVDVKP 311

Query: 308 FVTHEMKFEEINSAFDLLIKGK--CLRCVI 335
            +TH    E+   AF+   KGK   ++ VI
Sbjct: 312 LITHRFPLEDAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  108 bits (273), Expect = 4e-27
 Identities = 78/322 (24%), Positives = 120/322 (37%), Gaps = 40/322 (12%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
               P +LGHE +G V +VG +   V  GD V+ +    C EC  C +   NLC+     
Sbjct: 63  GVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCA----- 117

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                        K               ++EY ++  +  +     + P  A  L+C  
Sbjct: 118 -------------KGRALGIFQD----GGYAEYVIVPHSRYLVDPGGLDPALAATLACSG 160

Query: 138 STGVGAAWRTANVEVGST-VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
            T   A  +     V    VVI G G +GL      +  G   II VD+   K E  K  
Sbjct: 161 LTAYSAV-KKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           G    VN  +       + II    GG D   + V  ++    A+    KG GK +++G+
Sbjct: 220 GADVVVNGSDPDAA---KRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGL 275

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD--KELELDKFVTHEMK 314
              G + +L    +      + GS  G L+        L+  +   K  +L      E  
Sbjct: 276 --FGGEATLPLPLLPLRALTIQGSYVGSLEE-------LRELVALAKAGKLKPIPLTERP 326

Query: 315 FEEINSAFDLLIKGKCL-RCVI 335
             ++N A D L  GK + R V+
Sbjct: 327 LSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  107 bits (270), Expect = 9e-27
 Identities = 91/311 (29%), Positives = 130/311 (41%), Gaps = 48/311 (15%)

Query: 23  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 82
           RILGHE +GVVE VG  V     GD V+   ++ C  C  CR    + C +       W 
Sbjct: 56  RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCES-----GGW- 109

Query: 83  PRDQTSRFKDLRGETIH----HFVSV--SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                     + G  I      +V +  +  S Y         K+   V    A +LS  
Sbjct: 110 ----------ILGNLIDGTQAEYVRIPHADNSLY---------KLPEGVDEEAAVMLSDI 150

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           + TG         V+ G TV I G G +GLA    A+L   ++II VD+   + E+ K+ 
Sbjct: 151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKL 210

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK--GWGKTI- 252
           G T  VNS         + ++++TDG G D   E VG    +   +  C++    G  I 
Sbjct: 211 GATHTVNSA---KGDAIEQVLELTDGRGVDVVIEAVG----IPATFELCQELVAPGGHIA 263

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHE 312
            +GV      L L   E L    I + +   GL   +  P+LLK     +L+  K VTH 
Sbjct: 264 NVGVHGKPVDLHL---EKLWIKNITITT---GLVDTNTTPMLLKLVSSGKLDPSKLVTHR 317

Query: 313 MKFEEINSAFD 323
            K  EI  A+D
Sbjct: 318 FKLSEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  106 bits (267), Expect = 3e-26
 Identities = 88/311 (28%), Positives = 133/311 (42%), Gaps = 42/311 (13%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  +GHE +GVVE VG  V  V  GD VI  F      C  CR+     C         
Sbjct: 53  APAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC--------- 103

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVDPTVPPNRACL------ 132
                       + G     FV      EY  + +A   +VKV P  P +   L      
Sbjct: 104 ------------VHGGFWGAFVD-GGQGEYVRVPLADGTLVKV-PGSPSDDEDLLPSLLA 149

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           LS  + TG  AA  +A V  GSTVV+ G G++GL     A+  GA RII +    ++  +
Sbjct: 150 LSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQAL 208

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 251
            + FG T+ V  +  G+++V++ + ++T G GAD   ECVG    +++A A  R G G+ 
Sbjct: 209 AREFGATDIVAER--GEEAVAR-VRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRV 264

Query: 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTH 311
             +GV  P   + L   E+      L G   G    +  +P LL   +   +   +    
Sbjct: 265 GYVGV--PHGGVELDVRELFFRNVGLAG---GPAPVRRYLPELLDDVLAGRINPGRVFDL 319

Query: 312 EMKFEEINSAF 322
            +  +E+   +
Sbjct: 320 TLPLDEVAEGY 330

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  106 bits (266), Expect = 4e-26
 Identities = 89/316 (28%), Positives = 132/316 (41%), Gaps = 33/316 (10%)

Query: 24  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS---AFPFKISP 80
           +LGHE +G V  VG  V  +  GD V+  F   C EC  CR  +   C+    F +  SP
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +   Q              +V V  F++ T+      +K+   +    A LL   + TG
Sbjct: 116 NLDGAQA------------EYVRVP-FADGTL------LKLPDGLSDEAALLLGDILPTG 156

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
              A + A V  G TV + G G +GL     A++ GA R+  VD + E+ E     G  E
Sbjct: 157 YFGA-KRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AE 214

Query: 201 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
            +N +   D    + + + T+G GAD   E VG A+ +  A+   R   G    +GV   
Sbjct: 215 PINFE---DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTA 270

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
             +      +     K L    FG    +S  P LL       L+L+  + H M  EE  
Sbjct: 271 E-EFPFPGLDAY--NKNLTLR-FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAP 326

Query: 320 SAFDLLIKGKCLRCVI 335
            A+ L  K K L+ V+
Sbjct: 327 EAYRLFDKRKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  102 bits (257), Expect = 6e-25
 Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 45/321 (14%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE  G VE VG  VDG+ EGD V+ H    C  C  CR  + N C         
Sbjct: 57  LPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCEN------- 109

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                  +RF    G           F+EY ++    +VK+   + P  A  L+    T 
Sbjct: 110 -------ARF---PGIGTD-----GGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTA 154

Query: 141 VGAAWRTANV-EVGSTVVIFG---LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
             A  +     + GSTVV+ G   LG I + +    R      +I VD   E  ++ +R 
Sbjct: 155 YHAVKKALPYLDPGSTVVVIGVGGLGHIAVQIL---RALTPATVIAVDRSEEALKLAERL 211

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G    +N        V + + ++T G GAD   + VG    +  A     KG G+ +++G
Sbjct: 212 GADHVLN----ASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVG 266

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
               G    L + +++ +   ++GSL+G     +++  ++      ++   K    +   
Sbjct: 267 Y---GGHGRLPTSDLVPTEISVIGSLWGTR---AELVEVVALAESGKV---KVEITKFPL 317

Query: 316 EEINSAFDLLIKGKCL-RCVI 335
           E+ N A D L +G+   R V+
Sbjct: 318 EDANEALDRLREGRVTGRAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  100 bits (252), Expect = 2e-24
 Identities = 66/313 (21%), Positives = 112/313 (35%), Gaps = 66/313 (21%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P   GHE  G V ++G  V G+  GD V                                
Sbjct: 52  PGGPGHEGWGRVVALGPGVRGLAVGDRVA------------------------------- 80

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP--PNRACLLSCGVST 139
                               +S  +F+EY + D  H V +   +         L C ++ 
Sbjct: 81  -------------------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN- 120

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
                +R   +  G TV + G G IGL   + A   GA R+I +D    +  + +  G T
Sbjct: 121 ----VFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGAT 176

Query: 200 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           E V   +   +++ + + ++T G GAD   E VG    +  A     +  G+ ++ G  Q
Sbjct: 177 EVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ 232

Query: 259 PG-SQLSLSSFEVLHSGKILMGSLFGGLKAK-SDIPILLKRYMDKELELDKFVTHEMKFE 316
            G   +   +      G  L+ ++    +     +   +K   D  L+L   +THE   E
Sbjct: 233 DGPRPVPFQT--WNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLE 290

Query: 317 EINSAFDLLIKGK 329
           E+  AF+   +  
Sbjct: 291 ELGDAFEAARRRP 303

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 97.3 bits (243), Expect = 2e-23
 Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 23/230 (10%)

Query: 108 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 167
           +E  V+    +V +   +PP RA L +   +T +      A   +G  V + GLG +GL 
Sbjct: 55  AERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLL 112

Query: 168 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 227
            A+ A+  GA  ++GVD  + + E+ +  G  + V +             ++   GAD  
Sbjct: 113 AAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD---------TADEIGGRGADVV 163

Query: 228 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG--KILMGSLFGGL 285
            E  G  S ++ A    R   G+ +++G       L L   E  H     I    ++G  
Sbjct: 164 IEASGSPSALETALRLLRDR-GRVVLVGWYGLKP-LLLG--EEFHFKRLPIRSSQVYGIG 219

Query: 286 KAKSDIPILLKRYMDKELEL------DKFVTHEMKFEEINSAFDLLIKGK 329
           +          R +++ L+L      +  +TH + FE+   A+ LL +  
Sbjct: 220 RYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDP 269

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 97.0 bits (242), Expect = 6e-23
 Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 47/323 (14%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
           R  +P ILGHE +G VE VGE V+    GD VI ++   C +C  C S + NLC      
Sbjct: 51  RGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC------ 104

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                           R    +       F+EY  +    +VK+   V    A L +C V
Sbjct: 105 ----------------RNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVV 148

Query: 138 STGVGAAWRTANVEVGSTVVI-FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
            T V A  + A V+ G TV++    G +G+   + A+  GA R+I V    EK +I K  
Sbjct: 149 GTAVHAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKEL 206

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           G    ++     +            GGAD   E VG  ++ +   +   KG G+ +++G 
Sbjct: 207 GADYVIDGSKFSEDVKKL-------GGADVVIELVGSPTIEESLRS-LNKG-GRLVLIGN 257

Query: 257 DQPGSQLSLSSFEVLHSGKILMG--SLFGGLKA-KSDIPILLKRYMDKELELDKFVTHEM 313
             P           L  G +++    + G + A K+D+   LK  + KE ++   +   +
Sbjct: 258 VTP-------DPAPLRPGLLILKEIRIIGSISATKADVEEALK--LVKEGKIKPVIDRVV 308

Query: 314 KFEEINSAFDLLIKGKCL-RCVI 335
             E+IN A + L  GK + R V+
Sbjct: 309 SLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 94.2 bits (235), Expect = 7e-22
 Identities = 78/307 (25%), Positives = 118/307 (38%), Gaps = 39/307 (12%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P +LGHE  GVVE+VG  V G+  G  V  +    C  C  CR+ + NLC    F  S  
Sbjct: 54  PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGS-- 111

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
                  RF  ++G           F EY V+D +  V +   +   RA  L+  ++  +
Sbjct: 112 -----AMRFPHVQG----------GFREYLVVDASQCVPLPDGLSLRRAA-LAEPLAVAL 155

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
            A  R  ++  G  V++ G G IG  V   AR  GA  I+  D+      + +  G  E 
Sbjct: 156 HAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADET 214

Query: 202 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV----LGVD 257
           VN       + +        G  D  FE  G  + +  A    R   G T+V    LG  
Sbjct: 215 VNLARDPLAAYAADK-----GDFDVVFEASGAPAALASALRVVRP--GGTVVQVGMLGGP 267

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
            P    +L + E+          L G  +   +    ++      +++   +T     EE
Sbjct: 268 VPLPLNALVAKEL---------DLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEE 318

Query: 318 INSAFDL 324
              AF L
Sbjct: 319 AAEAFAL 325

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 85/325 (26%), Positives = 134/325 (41%), Gaps = 58/325 (17%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPF 76
           +   P I GHE  GVV +VG  V G+  GD V +      C +C  CR+    LC     
Sbjct: 53  KPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN--- 109

Query: 77  KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                  +  +    D             +F+EY + D  +V  +   +   +A  L C 
Sbjct: 110 -------QKNSGYTVD------------GTFAEYAIADARYVTPIPDGLSFEQAAPLLCA 150

Query: 137 VSTGVGAAWRTANVEVGSTVVIFG----LGSIGL--AVAEGARLCGATRIIGVDVISEKF 190
             T V  A + A ++ G  VVI G    LG +G+  A A G R      +I +DV  EK 
Sbjct: 151 GVT-VYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR------VIAIDVGDEKL 203

Query: 191 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWG 249
           E+ K  G   FV+ K        + + ++T G GA         A+  ++A    R G G
Sbjct: 204 ELAKELGADAFVDFK---KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-G 259

Query: 250 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELEL---D 306
             + +G+  PG  + L  F+++  G  ++GSL G  +            + + LE     
Sbjct: 260 TLVCVGL-PPGGFIPLDPFDLVLRGITIVGSLVGTRQD-----------LQEALEFAARG 307

Query: 307 KFVTH--EMKFEEINSAFDLLIKGK 329
           K   H   +  E++N  F+ + +GK
Sbjct: 308 KVKPHIQVVPLEDLNEVFEKMEEGK 332

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 83/328 (25%), Positives = 131/328 (39%), Gaps = 58/328 (17%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNL 70
           Q R   P I GHE  G V  VGE V  V  GD V     I      C +C  CR+   ++
Sbjct: 52  QSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIV-----CGKCYQCRTGNYHV 106

Query: 71  CSAFPFKISPWMPRDQTSRF--KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPN 128
           C              Q ++    D  G           F+EY V+   ++ K D  +PP 
Sbjct: 107 C--------------QNTKILGVDTDG----------CFAEYVVVPEENLWKNDKDIPPE 142

Query: 129 RACLLSCGVSTGVGAAWRTANVE--VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186
            A      +   +G A  T       G +V+I G G IGL     A+  GA+ +I  D  
Sbjct: 143 IA-----SIQEPLGNAVHTVLAGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPN 197

Query: 187 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 246
             + E+ K+ G    +N +   ++ V ++       G D   E  G    +++       
Sbjct: 198 PYRLELAKKMGADVVINPR---EEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTP 254

Query: 247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG----SLFGGLKAKSDIPILLKRYMDKE 302
           G G+  +LG+      + L++  V+  G  + G     +F      S    LLK     +
Sbjct: 255 G-GRVSILGLPPGPVDIDLNN-LVIFKGLTVQGITGRKMFETWYQVSA---LLK---SGK 306

Query: 303 LELDKFVTHEMKFEEINSAFDLLIKGKC 330
           ++L   +TH++  E+   AF+L+  GKC
Sbjct: 307 VDLSPVITHKLPLEDFEEAFELMRSGKC 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 85/313 (27%), Positives = 131/313 (41%), Gaps = 40/313 (12%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
           R  +P ILGHE +G VE VGENV G   GD V     A    C  CRS +   C      
Sbjct: 51  RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC------ 104

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                      + +   GE +  F     F+EY  + +  +VKV P V    A ++ C  
Sbjct: 105 -----------KNRLGYGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVT 148

Query: 138 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
                   R A V+ G TV++ G  G +G+   + A+  GA ++I V     K +I  ++
Sbjct: 149 GMVYRGL-RRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY 206

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
              ++V   +   + V +I      GGAD   E VG  +L +E+      G GK I +G 
Sbjct: 207 A--DYVIVGSKFSEEVKKI------GGADIVIETVGTPTL-EESLRSLNMG-GKIIQIGN 256

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
             P    SL    ++     ++G +      K D+   LK  +  E ++   +  E+   
Sbjct: 257 VDPSPTYSLRLGYIILKDIEIIGHISAT---KRDVEEALK--LVAEGKIKPVIGAEVSLS 311

Query: 317 EINSAFDLLIKGK 329
           EI+ A + L    
Sbjct: 312 EIDKALEELKDKS 324

Length = 334

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 85.1 bits (211), Expect = 2e-20
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 164 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG- 222
           +GLA  + A+  GA R+I VD   EK E+ K  G    +N +   D+   + + ++T G 
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYR---DEDFVERVRELTGGR 58

Query: 223 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 282
           G D   +CVG  + +++A    R G    +V         +     ++L     ++GSL 
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGA--PVPFPLRDLLLKELTILGSLG 116

Query: 283 GGLK 286
           GG +
Sbjct: 117 GGRE 120

Length = 131

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 37/241 (15%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
            P +LGHE  G +  VG +V+G   GD VV     + C  C  CR    NLC        
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPH------ 108

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCG 136
                      +   G           F+EY ++    + ++   +    A L   L+  
Sbjct: 109 -----------RKGIGTQAD-----GGFAEYVLVPEESLHELPENLSLEAAALTEPLAVA 152

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII-GVDVISEKFEIGKR 195
           V     A    + +  G TVV+FG G IGL  A+ A+L GAT ++ G +    + ++ K 
Sbjct: 153 VH----AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE 208

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
            G      + N G++ +++++ ++TDG GAD   EC G    +++A    RKG G+ + +
Sbjct: 209 LGAD----AVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQV 263

Query: 255 G 255
           G
Sbjct: 264 G 264

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 87.2 bits (216), Expect = 4e-19
 Identities = 76/318 (23%), Positives = 126/318 (39%), Gaps = 46/318 (14%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ++GHE  GVVE  G+NV    +GD V    +  C  C  CRS   N C         
Sbjct: 87  FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCK-------- 138

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV---PPNRACLLSCGV 137
                     K+L       F +  +F+EY  ++  +  +++        ++A      V
Sbjct: 139 --------NLKEL------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALV 184

Query: 138 S-TGV---GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
             T V   G   R      G+ VV++G G IGLA    A+  GA+++I  ++  E+  + 
Sbjct: 185 EPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLV----QEAYACCRKGW 248
           K  G     N     D    + ++++T G GAD   E  G         +++ A      
Sbjct: 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN---- 300

Query: 249 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG--GLKAKSDIPILLKRYMDKELELD 306
           GK + +G  +  + + L   EVL   +     + G  G       P ++K     ++++ 
Sbjct: 301 GKIVYIG--RAATTVPL-HLEVLQVRR---AQIVGAQGHSGHGIFPSVIKLMASGKIDMT 354

Query: 307 KFVTHEMKFEEINSAFDL 324
           K +T     E I  A   
Sbjct: 355 KIITARFPLEGIMEAIKA 372

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 72/320 (22%), Positives = 118/320 (36%), Gaps = 58/320 (18%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKI 78
            +P + GHE +G V  VG  V+G   GD V +   +  C  C  CR    NLC       
Sbjct: 52  KYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA---- 107

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
                           G     + +   ++EY V D  + V +   +P  +A  L C   
Sbjct: 108 -------------VNTG-----YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGI 149

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           T V +A R A    G  V + G+G +G    + AR  G    + +    +K E+ ++ G 
Sbjct: 150 T-VYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGA 207

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
            E V+S    D            GGAD     V   +  + A    R+G G+ +++G+  
Sbjct: 208 DEVVDSGAELD-------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLP- 258

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLK---------AKSDIPILLKRYMDKELELDKFV 309
                S   F ++   + + GS  GG           A+  +               K +
Sbjct: 259 ESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKV---------------KPM 303

Query: 310 THEMKFEEINSAFDLLIKGK 329
                 ++ N A++ + KG 
Sbjct: 304 IETFPLDQANEAYERMEKGD 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 84.9 bits (210), Expect = 1e-18
 Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 53/331 (16%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
           Q R   P+++GHE  G V  +G  V+G+  GD V       C +C  CR  + ++C    
Sbjct: 50  QSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC---- 105

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--- 132
                             +   I    +   F+EY V+   ++ K   ++PP  A +   
Sbjct: 106 ------------------QNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEP 147

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           L   V T +      A    G +V++ G G IGL     A+  GA  +I  D    + E+
Sbjct: 148 LGNAVHTVL------AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLEL 201

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 251
            K+ G T  VN      + V + + D+TDG G D   E  G    +++       G G+ 
Sbjct: 202 AKKMGATYVVNPF---KEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRV 257

Query: 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLF-GGLKAKS------DIPILLKRYMDKELE 304
            +LG+  P  ++++       + K++   L   G+  +        +  L++      L+
Sbjct: 258 SLLGL--PPGKVTID-----FTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGK---LD 307

Query: 305 LDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
           LD  +TH+ KF++    F+L+  G+  + ++
Sbjct: 308 LDPIITHKFKFDKFEKGFELMRSGQTGKVIL 338

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 77/336 (22%), Positives = 118/336 (35%), Gaps = 69/336 (20%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFK 77
             +P + GHE +G+V +VG  V     GD V      D C  C  C+S +   C      
Sbjct: 51  TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYC------ 104

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                P+   +        TI        ++++ V+D   V K+   +    A  L C  
Sbjct: 105 -----PKGVVTYNGKYPDGTITQ----GGYADHIVVDERFVFKIPEGLDSAAAAPLLCAG 155

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS---EK 189
            T V +  +   V  G  V + G+G +G      A A GA          V   S    K
Sbjct: 156 IT-VYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGAE---------VTAFSRSPSK 205

Query: 190 FEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEAYACCR 245
            E   + G  EF+ +K+    K  +    +IID      D             + Y    
Sbjct: 206 KEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDL------------DPYLSLL 253

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELEL 305
           K  G  +++G   P   L +  F ++   K + GSL GG K              + L+ 
Sbjct: 254 KPGGTLVLVGA--PEEPLPVPPFPLIFGRKSVAGSLIGGRKE-----------TQEMLDF 300

Query: 306 D-----KFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335
                 K     +  + IN A + L KG    R V+
Sbjct: 301 AAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVL 336

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 81.0 bits (201), Expect = 3e-17
 Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 73/329 (22%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIP--HFLADCTECVGCRSKKGNLCSAFPFKIS 79
           P ++GHE +G V  VG  V G   GD V    H +  C  C  CR+ + +LC        
Sbjct: 58  PMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIV--CGHCRNCRAGRRHLC-------- 107

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                      ++ +G      V V+   +F+EY V+   +V K+   +P + A +    
Sbjct: 108 -----------RNTKG------VGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFD-- 148

Query: 137 VSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
                G A  TA   ++ VG  V+I G G IG+  A  A+  GA  ++  DV   + E+ 
Sbjct: 149 ---PFGNAVHTALSFDL-VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA 204

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 252
           ++ G T  VN      + +  ++ ++    G D   E  G  S  ++       G G+  
Sbjct: 205 RKMGATRAVNV---AKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIA 260

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM-----------DK 301
           +LG+  P   +++   +V+  G  + G ++G             R M             
Sbjct: 261 MLGI--PPGDMAIDWNKVIFKGLTIKG-IYG-------------REMFETWYKMSALLQS 304

Query: 302 ELELDKFVTHEMKFEEINSAFDLLIKGKC 330
            L+L   +TH    ++    F+ +  G+ 
Sbjct: 305 GLDLSPIITHRFPIDDFQKGFEAMRSGQS 333

Length = 341

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 67/329 (20%), Positives = 106/329 (32%), Gaps = 73/329 (22%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           +P ILG +  G V  VG  V     GD V                + G            
Sbjct: 54  YPAILGCDFAGTVVEVGSGVTRFKVGDRV----AGFVHGGNPNDPRNG------------ 97

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST- 139
                                    +F EY V D     K+   +    A  L  G+ T 
Sbjct: 98  -------------------------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTA 132

Query: 140 --------GVGAAWRTAN-VEVGSTVVIFGLGS--IGLAVAEGARLCGATRIIGVDVISE 188
                   G+       +    G  V+I+G GS  +G    + A+L G  ++I     S 
Sbjct: 133 ALALFQKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVIT--TASP 188

Query: 189 K-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 247
           K F++ K  G     +     D  V + I   T G   Y  +C+      Q       + 
Sbjct: 189 KNFDLVKSLGADAVFDYH---DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRS 245

Query: 248 WGKTIV--LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELEL 305
            G  +V  L V +          + +    +L  ++FG +    +   +  +Y+ + LE 
Sbjct: 246 GGGKLVSLLPVPEET-----EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEE 300

Query: 306 DKFVTHEMK-----FEEINSAFDLLIKGK 329
            K   H ++      E +    DLL KGK
Sbjct: 301 GKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 33/231 (14%)

Query: 22  PRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           P I GHE +G V  +GE  +  GV  GD VI   +  C  C  C   +  +C        
Sbjct: 63  PMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQK------ 116

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCG 136
                       DL G   +    ++ +  +    I H  KV   +PP  A L   L+C 
Sbjct: 117 -----------HDLYGFQNNVNGGMAEYMRFPKEAIVH--KVPDDIPPEDAILIEPLACA 163

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           +     A  R AN++    VV+ G G +GL +   ARL    ++I +D+  E+  + ++F
Sbjct: 164 LH----AVDR-ANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 246
           G    +N     +  V + I ++T G G D   E  G  S V++     RK
Sbjct: 219 GADVVLNPP---EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRK 266

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 77.0 bits (190), Expect = 6e-16
 Identities = 65/314 (20%), Positives = 106/314 (33%), Gaps = 59/314 (18%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I G EA GVV +VG  V G   GD V                               
Sbjct: 57  LPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG-------------------------- 90

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                                     ++EY V+    +V +   +    A  L     T 
Sbjct: 91  --------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTA 130

Query: 141 VGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             A +  A ++ G TV++ G  G +G A  + A+  GAT +  V   SEK E+ K  G  
Sbjct: 131 WLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLELLKELGAD 189

Query: 200 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
             +N +   ++   + + ++T G G D   + VG       + A    G G+ + +G   
Sbjct: 190 HVINYR---EEDFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALS 244

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF---VTHEMKF 315
            G  + L+   +L     L G   G    ++    L +  +   L   K    +      
Sbjct: 245 GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE--LFDLLASGKLKPVIDRVYPL 302

Query: 316 EEINSAFDLLIKGK 329
            E  +A   L+  +
Sbjct: 303 AEAPAAAAHLLLER 316

Length = 326

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 77.1 bits (190), Expect = 7e-16
 Identities = 86/318 (27%), Positives = 129/318 (40%), Gaps = 48/318 (15%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P ++GHE  G++E VG  V  +V GD V       C  C  C+  + NLC    F  +P 
Sbjct: 74  PMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP- 132

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 138
                           +H      S +   V       K+   V      +   LS GV 
Sbjct: 133 ---------------PVH-----GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH 172

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
                A R AN+   + V++ G G IGL     AR  GA RI+ VDV  E+  + K+ G 
Sbjct: 173 -----ACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGA 227

Query: 199 TEFVN-SKNCGD--KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
            E V  S N  D    V +I   M  GG D  F+CVG    +  A    R G GK  ++G
Sbjct: 228 DEIVLVSTNIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVG 285

Query: 256 VDQPGSQLSLSSF---EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHE 312
           +      + L+     EV          + G  + ++  P+ L+     ++++   +TH 
Sbjct: 286 MGHNEMTVPLTPAAAREV---------DVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHR 336

Query: 313 MKF--EEINSAFDLLIKG 328
             F  +E+  AF+   +G
Sbjct: 337 FGFSQKEVEEAFETSARG 354

Length = 364

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 76.8 bits (190), Expect = 7e-16
 Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 29/165 (17%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
            P I GHE +G VE+VG  V     GD V +P   + C EC  CRS + NLC    F   
Sbjct: 58  LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-- 115

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
                          G T+        ++EY V D      +        A  L C    
Sbjct: 116 ---------------GYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGII 155

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATR 179
           G   A + A ++ G  + ++G G+       +A  +GA +   TR
Sbjct: 156 GYR-ALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 63/263 (23%), Positives = 99/263 (37%), Gaps = 41/263 (15%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           +P  LGHE  G VE+VG  VD +  GD V    L  C  C  C     +LC+ + F    
Sbjct: 53  YPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFI--- 109

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                  SR                  +EY V+   ++  +   +P      +   ++ G
Sbjct: 110 ------GSR-------------RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVG 149

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
           + A       E G  V+I G G+IGL   + A   GA  +  +D+ SEK  + K  G  +
Sbjct: 150 LHAFHLAQGCE-GKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQ 208

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
             NS+            +M+          +    L+ E       G  +T+ L ++  G
Sbjct: 209 TFNSR------------EMSAPQIQSVLRELRFDQLILET-----AGVPQTVELAIEIAG 251

Query: 261 SQLSLSSFEVLHSGKILMGSLFG 283
            +  L+    LH    L  + FG
Sbjct: 252 PRAQLALVGTLHHDLHLTSATFG 274

Length = 347

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 83/326 (25%), Positives = 121/326 (37%), Gaps = 69/326 (21%)

Query: 24  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 83
           +LGHEA+GVVE VG+   G+  GD+V+P       +C+ CR  + + C            
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE----------- 107

Query: 84  RDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVST 139
              T  + + RG   +H F       EY V D  ++VKV P++  +   L   LS     
Sbjct: 108 ---TGEYTE-RGIKGLHGF-----MREYFVDDPEYLVKVPPSL-ADVGVLLEPLSV---- 153

Query: 140 GVGAAWRTANVEVGS--------TVVIFGLGSIGL-----AVAEGARLCGATRIIGVDVI 186
            V  A   A   V            ++ G G IGL         G  +    R    D  
Sbjct: 154 -VEKAIEQA-EAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RDPP 208

Query: 187 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 246
             K +I +  G T +VNS       V         G  D   E  G+  L  EA      
Sbjct: 209 DPKADIVEELGAT-YVNSSKTPVAEVK------LVGEFDLIIEATGVPPLAFEALPALAP 261

Query: 247 GWGKTIVLGVDQPGSQLSLSSFE-----VLHSGKILMGSLFGGLK----AKSDIPILLKR 297
             G  I+ GV   G +  +   E     VL + K L+GS+    +    A  D+     R
Sbjct: 262 N-GVVILFGVPGGGREFEVDGGELNRDLVLGN-KALVGSVNANKRHFEQAVEDLAQWKYR 319

Query: 298 YMDKELELDKFVTHEMKFEEINSAFD 323
           +      L++ +T  +  EE   A  
Sbjct: 320 WPGV---LERLITRRVPLEEFAEALT 342

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 37/233 (15%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILG +  GVVE+VG  V  V  G  V+ +    C  C  C + + NLC+ +      
Sbjct: 57  LPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY------ 110

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                       + GE +        ++EY  +   +++ +   +    A        T 
Sbjct: 111 -----------GILGEHVDGG-----YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT- 153

Query: 141 VGAAWRT----ANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
              AW      A +  G TV++ G GS +G A  + A+L GAT I       +K E  K 
Sbjct: 154 ---AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGS-EDKLERAKE 209

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 247
            G    ++ +    +   + + ++T   G D   E VG A+  +++     +G
Sbjct: 210 LGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAATW-EKSLKSLARG 258

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 64/313 (20%), Positives = 121/313 (38%), Gaps = 48/313 (15%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A +PR++GHE  GV+++VGE VD    G+ V    +  C  C  C   K N+C++    +
Sbjct: 51  AKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSL---V 107

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
              + RD                     FSEY V+   +  ++   +    A +    V 
Sbjct: 108 VLGVHRD-------------------GGFSEYAVVPAKNAHRIPDAIADQYAVM----VE 144

Query: 139 TGVGAAWRTANVEV--GSTVVIFGLGSIGLAVAEG-ARLCGATRIIGVDVISEKFEIGKR 195
               AA  T           +I+G G +GL + +    +     +I  D I E+  + K 
Sbjct: 145 PFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE 204

Query: 196 FGVTEFVNSKNCGDKSVSQII----IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 251
            G    +N+     + + + +    I  T        +     S+++EA         + 
Sbjct: 205 SGADWVINN---AQEPLGEALEEKGIKPT-----LIIDAACHPSILEEAVTLASPA-ARI 255

Query: 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTH 311
           +++G     S++         +GK L  S+F      +  P+++       ++ +K +TH
Sbjct: 256 VLMGFSSEPSEIVQQGI----TGKEL--SIFSSRLNANKFPVVIDWLSKGLIDPEKLITH 309

Query: 312 EMKFEEINSAFDL 324
              F+ +  A +L
Sbjct: 310 TFDFQHVADAIEL 322

Length = 339

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 66/323 (20%)

Query: 23  RILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           RILGHE IG+V+ VG  V  +  GD V I  F   C  C  C + +  LC          
Sbjct: 55  RILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC---------- 104

Query: 82  MPRDQTSRFKDLR--GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVS 138
                    + ++  G T+         +E  ++   + VKV   + P +A  ++C GV+
Sbjct: 105 ---------RSVKNAGYTVD-----GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVT 150

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           T    A + + ++ G  + I+G G +G LA+     +  A ++I VD+  +K  + K  G
Sbjct: 151 TY--KAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVG 207

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
               +NSK   D      II    GGA          +   +A    R G G+ + +G+ 
Sbjct: 208 ADLTINSKRVED---VAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGL- 262

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFG-----------GLKAKSDIPILLKRYMDKELELD 306
            P   + LS   ++  G  ++GSL G           G + K  +P +  R         
Sbjct: 263 -PPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV-VPKVQLR--------- 311

Query: 307 KFVTHEMKFEEINSAFDLLIKGK 329
                    E+IN  FD + +GK
Sbjct: 312 -------PLEDINDIFDEMEQGK 327

Length = 338

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 22/101 (21%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHE  G+VE VG  V G+  GD V+ + L  C +C  CR  + NLC         
Sbjct: 30  LPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLCPN------- 82

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 121
                         G  +        F+EY V+   ++V +
Sbjct: 83  ----------GKFLGVHLD-----GGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 62.6 bits (152), Expect = 5e-11
 Identities = 75/328 (22%), Positives = 129/328 (39%), Gaps = 49/328 (14%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P  LGHE  G V   G      +   V++P  +  C EC  C++ +G +C          
Sbjct: 54  PLALGHEISGRVIQAGAGAASWIGKAVIVPAVIP-CGECELCKTGRGTIC---------- 102

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
             R Q     D++G    H V  +      V+D A +      +P     +++  V+T  
Sbjct: 103 --RAQKMPGNDMQGGFASHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPY 156

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
            AA + A ++ G  V++ G G +G  + + A+  GA  ++ +D+  EK E+ K FG    
Sbjct: 157 QAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLT 214

Query: 202 VNSKNCGDKSVSQIIIDMTDGGADYC------------FECVGLASLVQEAYACCRKGWG 249
           +N K+   + V ++I         +             FEC G     + A +    G G
Sbjct: 215 LNPKDKSAREVKKLI-------KAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-G 266

Query: 250 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDI-PILLKRYMDKELELDKF 308
             +V+G     ++  LS+    H+  +      G      D  P  L   +D +++L  F
Sbjct: 267 TLVVVGYTMAKTEYRLSNLMAFHARAL------GNWGCPPDRYPAALDLVLDGKIQLGPF 320

Query: 309 V-THEMKFEEINSAFDLLIKGKCLRCVI 335
           V    +  ++I   F      K  R  I
Sbjct: 321 VERRPL--DQIEHVFAAAHHHKLKRRAI 346

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 62.3 bits (152), Expect = 7e-11
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 106 SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLG 162
            ++EY +L  A +++V   +    A L   L+ G+      A R A +  G   ++ G G
Sbjct: 117 GYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLH-----AVRRARLTPGEVALVIGCG 171

Query: 163 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 222
            IGLAV    +  G   I+  D   E+  +    G    V+       +     +    G
Sbjct: 172 PIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG 231

Query: 223 GA-DYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
                 FECVG   L+Q+       G G+ +V+GV
Sbjct: 232 PKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 30/250 (12%)

Query: 24  ILGHEAIGVVESVGENVDGVVE------GDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
           +LGHE +G V ++        +      G  V+      C  C  CR      C      
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCD----- 55

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCG 136
                     S  K         +     ++E+  L     +V V   +P   A    C 
Sbjct: 56  ----------SLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
            +T V AA   A    G  V++ G G +GL  A  A   GA R++  D   ++ E+   F
Sbjct: 106 TAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G T     +   ++        + +G G D   E  G  + V+        G G  ++ G
Sbjct: 165 GATALAEPEVLAERQGG-----LQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218

Query: 256 VDQPGSQLSL 265
              PG  ++L
Sbjct: 219 SVFPGGPVAL 228

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TG       A V+ G TV +FG G +GL  A  A L GA+R+  VD + E+ ++ +  G 
Sbjct: 164 TGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232
              ++     D    + I+ +  GG D   +CVG
Sbjct: 223 -IPIDFS---DGDPVEQILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 69/327 (21%), Positives = 125/327 (38%), Gaps = 71/327 (21%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKI 78
            +PR+ GHE +G +++VGE V     GD V +      C  C  CR              
Sbjct: 53  SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACR-------------- 98

Query: 79  SPWMPRDQTSRFKDLRGETIH----HFVSVSS---FSEYTVLDIAHVVKVDPTVPPNRAC 131
                          RG+ +H        V+    ++EY +     + ++   +    A 
Sbjct: 99  ---------------RGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAA 143

Query: 132 LLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEK 189
            L C GV+T    A R +  + G  V + G+G +G LAV + A   G  R + +   S+K
Sbjct: 144 PLLCAGVTT--FNALRNSGAKPGDLVAVQGIGGLGHLAV-QYAAKMG-FRTVAISRGSDK 199

Query: 190 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 249
            ++ ++ G   ++++     + V++ + ++  GGA         A  +           G
Sbjct: 200 ADLARKLGAHHYIDTS---KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-G 253

Query: 250 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV 309
           K ++LG    G  +++S  +++   K + G   G               +D E  L    
Sbjct: 254 KLLILGAA--GEPVAVSPLQLIMGRKSIHGWPSG-------------TALDSEDTLKFSA 298

Query: 310 TH-------EMKFEEINSAFDLLIKGK 329
            H           E+ N A+D ++ GK
Sbjct: 299 LHGVRPMVETFPLEKANEAYDRMMSGK 325

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 31/192 (16%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           P I G E  GVVE VG++V GV +GD VV+ + + D T C  C S    LC         
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGT-CDMCLSGNEMLC--------- 104

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                        R   I   VS   ++EY V+   ++ K+  ++    A  L     T 
Sbjct: 105 -------------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTA 151

Query: 141 VGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             A  +TA +  G TVV+FG  G+ G+   + A++ GA  I     +S K +  K FG  
Sbjct: 152 YHAL-KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVI----AVSRK-DWLKEFGAD 205

Query: 200 EFVNSKNCGDKS 211
           E V+     +K 
Sbjct: 206 EVVDYDEVEEKV 217

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 41/313 (13%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           +P I GHE +G+   VG+NV    EGD V +   +  C  C  C     N C    F  +
Sbjct: 60  YPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYN 119

Query: 80  PWMPRDQTSRFKD-LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR-ACLLSCGV 137
                   SR  D  R +          +S+  V+D   V+ +   +P +  A LL  G+
Sbjct: 120 --------SRSSDGTRNQ--------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEK-FEIGKR 195
           +      +     E G  + + GLG +G +AV  G       R+  +   SEK  E   R
Sbjct: 164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAF--GLRVTVISRSSEKEREAIDR 221

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
            G   F+ + +      SQ + +   G  D+  + V     +   ++  +   GK + LG
Sbjct: 222 LGADSFLVTTD------SQKMKEAV-GTMDFIIDTVSAEHALLPLFSLLKVS-GKLVALG 273

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD-IPILLKRYMDKELELDKFVTHEMK 314
           +  P   L L  F ++   K++ GS  GG+K   + +    K  +  ++EL       +K
Sbjct: 274 L--PEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL-------IK 324

Query: 315 FEEINSAFDLLIK 327
             +INSA D L K
Sbjct: 325 MSDINSAMDRLAK 337

Length = 375

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 51/214 (23%), Positives = 78/214 (36%), Gaps = 53/214 (24%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           +P + G +  GVV +VG  V G   GD V  H                            
Sbjct: 56  YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYH---------------------------- 87

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                  S  +              SF+EYTV+D   V+ +  ++    A  L C   T 
Sbjct: 88  ------ASLARG------------GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTA 129

Query: 141 VGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             A ++   +E G T++I G  G +G    + A+  G  R+I        FE  K  G  
Sbjct: 130 YQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGAD 187

Query: 200 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 232
             ++     D+ V + I ++T G G D   + VG
Sbjct: 188 HVIDYN---DEDVCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 29/185 (15%)

Query: 24  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 83
           +LGHE  G V   G +V+ +  GD+V   F   C  C  C+     +C      ++P   
Sbjct: 64  VLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVC----LNVNPARA 119

Query: 84  RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNR---------ACL 132
                 + D+ G        V   SEY ++  A  +++K      P+R           +
Sbjct: 120 GAAYG-YVDMGG-------WVGGQSEYVMVPYADFNLLKF-----PDRDQALEKIRDLTM 166

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           LS    TG   A  TA V  GSTV I G G +GLA A  A+L GA  +I  D+   +   
Sbjct: 167 LSDIFPTGYHGAV-TAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ 225

Query: 193 GKRFG 197
            + FG
Sbjct: 226 ARSFG 230

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 55/319 (17%), Positives = 95/319 (29%), Gaps = 85/319 (26%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GH+  GVV +VG  V G   GD V                               
Sbjct: 59  LPLIPGHDVAGVVVAVGPGVTGFKVGDEVF----------------------GMTP---- 92

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                               F    +++EY V+    +      +    A      +   
Sbjct: 93  --------------------FTRGGAYAEYVVVPADELALKPANLSFEEA----AALPLA 128

Query: 141 VGAAWRT----ANVEVGSTVVIFG-LGSIG-----LAVAEGARLCGATRIIGVDVISEKF 190
              AW+       ++ G TV+I G  G +G     LA A GAR+            +   
Sbjct: 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS-------AANA 181

Query: 191 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 250
           +  +  G  E ++      +  +        GG D   + VG  +L   + A  + G G+
Sbjct: 182 DFLRSLGADEVIDYTKGDFERAAAP------GGVDAVLDTVGGETL-ARSLALVKPG-GR 233

Query: 251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 310
             ++ +  P      +    + +G + +      L         L   ++   +L   V 
Sbjct: 234 --LVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAE-------LAELVEAG-KLRPVVD 283

Query: 311 HEMKFEEINSAFDLLIKGK 329
                E+   A + L  G 
Sbjct: 284 RVFPLEDAAEAHERLESGH 302

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 54.4 bits (132), Expect = 2e-08
 Identities = 51/219 (23%), Positives = 76/219 (34%), Gaps = 55/219 (25%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
           Q +   P + G E  GVVE+VGE V G   GD V           V              
Sbjct: 52  QVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRV-----------VA------------- 87

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
                                          F+E  V+  A V  +   +    A  L  
Sbjct: 88  -------------------------LTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPV 122

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
              T   A  R A ++ G TV++ G  G +GLA  + A+  GA R+I      EK  + +
Sbjct: 123 TYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALAR 181

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 232
             G    ++     D  + + +  +T G G D  ++ VG
Sbjct: 182 ALGADHVIDY---RDPDLRERVKALTGGRGVDVVYDPVG 217

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.3 bits (129), Expect = 6e-08
 Identities = 64/271 (23%), Positives = 97/271 (35%), Gaps = 49/271 (18%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I   +  G V +VGE V     GD V+P F  +                        
Sbjct: 57  DPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPN------------------------ 92

Query: 81  WM--PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GV 137
           W+  P         L G  I         +EY VL    +V+    +    A  L C G+
Sbjct: 93  WLDGPPTAEDEASALGG-PIDGV-----LAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146

Query: 138 STGVGAAWR----TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
           +     AW        ++ G TV++ G G + L   + A+  GA R+I      EK E  
Sbjct: 147 T-----AWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERA 200

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 252
           K  G    +N +   D    + ++ +T G G D+  E  G  +L Q +      G G   
Sbjct: 201 KALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGPGTLAQ-SIKAVAPG-GVIS 256

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 283
           ++G    G +  +    +L  G  L G   G
Sbjct: 257 LIGF-LSGFEAPVLLLPLLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 52.1 bits (126), Expect = 1e-07
 Identities = 52/226 (23%), Positives = 81/226 (35%), Gaps = 79/226 (34%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P +LG E  GVVE+VG  V G   GD V                       A P     
Sbjct: 54  LPFVLGVEGAGVVEAVGPGVTGFKVGDRV---------------------AYAGPP---- 88

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                                    +++EY V+  + +VK    +P         G+S  
Sbjct: 89  ------------------------GAYAEYRVVPASRLVK----LPD--------GISDE 112

Query: 141 VGAAW------------RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 187
             AA              T  V+ G TV++    G +GL + + A+  GA  +IG     
Sbjct: 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSE 171

Query: 188 EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 232
           EK E+ +  G    +N +   D+   + + ++T G G D  ++ VG
Sbjct: 172 EKAELARAAGADHVINYR---DEDFVERVREITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCS 72
             +LGHEA+G VE VG  V+ +  GD VV+P F   C  C  C+     +C 
Sbjct: 54  GLVLGHEAMGEVEEVGSAVESLKVGDRVVVP-FNVACGRCRNCKRGLTGVCL 104

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.6 bits (122), Expect = 4e-07
 Identities = 58/230 (25%), Positives = 81/230 (35%), Gaps = 76/230 (33%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILG +  GVVE+VGE V     GD V            GC                 
Sbjct: 57  LPAILGCDVAGVVEAVGEGVTRFRVGDEVY-----------GC----------------- 88

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD---IAHVVKVDPTVPPNRACLLSCGV 137
                       L+G          S +EY V+D   +A         P N +   +  +
Sbjct: 89  ------AGGLGGLQG----------SLAEYAVVDARLLALK-------PANLSMREAAAL 125

Query: 138 STGVGAAW----RTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVIS 187
                 AW      A V+ G TV+I     G+G +   LA A GAR+  AT        S
Sbjct: 126 PLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVY-AT------ASS 178

Query: 188 EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 236
           EK    +  G    +  +     +V + + + T G G D  F+ VG  +L
Sbjct: 179 EKAAFARSLGADPIIYYRE----TVVEYVAEHTGGRGFDVVFDTVGGETL 224

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 6e-07
 Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 21/185 (11%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P +LGHE IG +     +  G+ EG  V  +    C  C  C S   N C+   F  S  
Sbjct: 60  PMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGS-- 115

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
                   F  + G           F+ Y V+D A  +              +  ++  +
Sbjct: 116 -----AMYFPHVDG----------GFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAVAI 159

Query: 142 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 201
            AA +  ++  G  V + G+G IG  +    +  GA  I+  DV      + +  G  + 
Sbjct: 160 HAAHQAGDL-QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL 218

Query: 202 VNSKN 206
           VN +N
Sbjct: 219 VNPQN 223

Length = 343

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 73/310 (23%), Positives = 118/310 (38%), Gaps = 36/310 (11%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           +P + GHE +G+V  +G+NV    EGD V +   +  C  C  C     N C    F  +
Sbjct: 66  YPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN 125

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
             +  D T  +                +S+  V+D   V++    +P +    L C   T
Sbjct: 126 S-IGHDGTKNY--------------GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGIT 170

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
                      E G  + + GLG +G +AV  G        +I      E   I  R G 
Sbjct: 171 VYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI-NRLGA 229

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
             F+ S +      +        G  DY  + V     +       +   GK I LG+  
Sbjct: 230 DSFLVSTDPEKMKAAI-------GTMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGL-- 279

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD-IPILLKRYMDKELELDKFVTHEMKFEE 317
           P   L L  F ++   K++ GS  GG+K   + +    K  +  ++EL       ++ +E
Sbjct: 280 PEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIEL-------IRMDE 332

Query: 318 INSAFDLLIK 327
           IN+A + L K
Sbjct: 333 INTAMERLAK 342

Length = 360

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 42/163 (25%), Positives = 57/163 (34%), Gaps = 45/163 (27%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
              P  LG+EA GVVE+VG  V G   GD V                            +
Sbjct: 55  PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVS---------------------------V 87

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
            P     Q                   +++EY ++  A VVK+   +    A  L     
Sbjct: 88  IPAADLGQ-----------------YGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL 130

Query: 139 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 180
           T  GA    A +  G +V+I     S+GLA  + A   GAT I
Sbjct: 131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVI 173

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 102 VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVI 158
           V VS + EY + D   + K+DP+  P  A L   G+  G+ A +        + G TVV+
Sbjct: 98  VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM-PGLTAYFGLLDIGQPKAGETVVV 156

Query: 159 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQII 216
               G++G  V + A+L G  R++G+   +EK +      G    ++ K    +  +Q +
Sbjct: 157 SAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK---AEDFAQAL 212

Query: 217 IDMTDGGADYCFECVG 232
            +    G D  FE VG
Sbjct: 213 KEACPKGIDVYFENVG 228

Length = 340

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 52/218 (23%), Positives = 74/218 (33%), Gaps = 50/218 (22%)

Query: 21  FPRILGHEAIGVVESVGEN--VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           FP + GHE +G+VE   E   V   V G++ I      C  C  CR      C       
Sbjct: 50  FPGVPGHEFVGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC------- 97

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
               P        D  G          +F+EY  L + ++  V   VP  +A      V 
Sbjct: 98  ----PNRTVLGIVDRDG----------AFAEYLTLPLENLHVVPDLVPDEQA------VF 137

Query: 139 T----GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
                          +  G  V + G G +GL +A+   L G   ++ V   SEK  + +
Sbjct: 138 AEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALAR 196

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232
           R GV            +V     +   GG D   E  G
Sbjct: 197 RLGVE-----------TVLPDEAESEGGGFDVVVEATG 223

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 32/162 (19%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
            FPRI G + +G V +VGE VD    G+ V+                           + 
Sbjct: 76  SFPRIQGADIVGRVVAVGEGVDTARIGERVL---------------------------VD 108

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
           P +         D+    I        F+EYTV+   +   V+  +         C  ST
Sbjct: 109 PSIRDPPEDDPADID--YIGSERD-GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYST 165

Query: 140 GVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 180
                 R A V  G TV++ G  G +G A+ + A+  GA  I
Sbjct: 166 AENMLER-AGVGAGETVLVTGASGGVGSALVQLAKRRGAIVI 206

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 62/216 (28%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P + G +  GVVE+VGE VDG+  GD V   +L +    +G   ++G             
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRV---WLTN----LGWGRRQG------------- 97

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
                                   + +EY V+    +V +   V          G + G+
Sbjct: 98  ------------------------TAAEYVVVPADQLVPLPDGVSF------EQGAALGI 127

Query: 142 GA--AWRT----ANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
            A  A+R     A  + G TV++ G  G++G A  + AR  GA R+I     +E  E+ +
Sbjct: 128 PALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVR 186

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE 229
           + G     N +    + ++  I+  T G G D   E
Sbjct: 187 QAGADAVFNYR---AEDLADRILAATAGQGVDVIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPH 52
           P + G+E +G V  VG  V  +  GD VIP 
Sbjct: 63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPL 94

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 46/315 (14%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           +P + GHE +G V  VG +V     GD+V +   +  C EC  C+S     C+    +I 
Sbjct: 63  YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNK---RI- 118

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
            W   D  +  K  +G           F+   V+D   VVK+   + P +A  L C   T
Sbjct: 119 -WSYNDVYTDGKPTQG----------GFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVT 167

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----EKFEIGKR 195
                      + G    I GLG +G    + A+  G      V VIS    ++ E  + 
Sbjct: 168 VYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH----VTVISSSDKKREEALEH 223

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGG--ADYCFECVGLASLVQEAYACCRKGWGKTIV 253
            G  +++         VS    +M +     DY  + V +   + E Y    K  GK I+
Sbjct: 224 LGADDYL---------VSSDAAEMQEAADSLDYIIDTVPVFHPL-EPYLSLLKLDGKLIL 273

Query: 254 LGV-DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHE 312
           +GV + P   L   +  ++   K++ GS  G +K   ++   L+   +K L     +   
Sbjct: 274 MGVINTP---LQFVTPMLMLGRKVITGSFIGSMKETEEM---LEFCKEKGL---TSMIEV 324

Query: 313 MKFEEINSAFDLLIK 327
           +K + +N+AF+ L K
Sbjct: 325 VKMDYVNTAFERLEK 339

Length = 357

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 17/159 (10%)

Query: 94  RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW----RTAN 149
            G+ +     V   +EY  LD  ++V V   V    A    C V   V  A+    R A 
Sbjct: 81  VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEA---VCLVLNYV-TAYQMLHRAAK 136

Query: 150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 208
           V  G  V+I G  G +G A+ E A L GA  + G           +  G T         
Sbjct: 137 VLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALRELGATPIDYR---- 190

Query: 209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 247
            K     ++  T GG D  F+ VG  S  +   A    G
Sbjct: 191 TKDWLPAML--TPGGVDVVFDGVGGESYEESYAALAPGG 227

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 48/236 (20%), Positives = 70/236 (29%), Gaps = 70/236 (29%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
              FP I G +  G V +VG  V     GD V            G    KG         
Sbjct: 55  GRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVF-----------GRLPPKG--------- 94

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
                            G          + +EY V   + + K    V    A  L    
Sbjct: 95  ----------------GG----------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128

Query: 138 STGVGAAWRTANVEVGSTVVIFG----LGSIG--LAVAEGARLCGATRIIGVDVISEKFE 191
            T + A      V+ G  V+I G    +G+    +A A GA       + GV   +   E
Sbjct: 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA------HVTGVC-STRNAE 181

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA--DYCFECVGLASLVQEAYACCR 245
           + +  G  E ++             + +T GG   D  F+ VG +      Y    
Sbjct: 182 LVRSLGADEVIDYTTED-------FVALTAGGEKYDVIFDAVGNSPF--SLYRASL 228

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGV 183
           G TV+I GLG IG  +A  A+  G  R+IGV
Sbjct: 134 GKTVLIVGLGDIGREIARRAKAFGM-RVIGV 163

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP 51
          R   P + G+E +GVV  VG  V G++ G  V+P
Sbjct: 53 RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLP 86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.98
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.97
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
PTZ00354	334	alcohol dehydrogenase; Provisional	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.97
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.97
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.97
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.96
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.96
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.96
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.96
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.96
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.96
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.96
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.95
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.95
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.95
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.95
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.94
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.77
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.69
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.5
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.37
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.29
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.62
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.54
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.45
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.33
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.27
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.17
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.17
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.16
PLN02494	477	adenosylhomocysteinase	98.07
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.04
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.03
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.89
PRK08324	681	short chain dehydrogenase; Validated	97.79
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.76
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.69
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.66
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.61
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.51
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.42
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.42
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.38
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.37
PRK05693	274	short chain dehydrogenase; Provisional	97.29
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.28
COG4122	219	Predicted O-methyltransferase [General function pr	97.28
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.2
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.16
PRK04148	134	hypothetical protein; Provisional	97.15
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.14
TIGR00438	188	rrmJ cell division protein FtsJ.	97.11
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.08
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.08
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.07
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.06
PRK05993	277	short chain dehydrogenase; Provisional	97.05
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.02
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.01
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.98
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.93
PRK08177	225	short chain dehydrogenase; Provisional	96.91
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.87
PRK14967	223	putative methyltransferase; Provisional	96.83
PRK12742	237	oxidoreductase; Provisional	96.82
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.81
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.81
PRK00536	262	speE spermidine synthase; Provisional	96.78
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.76
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.75
PLN03209	576	translocon at the inner envelope of chloroplast su	96.75
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.74
PRK08017	256	oxidoreductase; Provisional	96.73
PRK06139	330	short chain dehydrogenase; Provisional	96.72
PRK07326	237	short chain dehydrogenase; Provisional	96.7
PRK00811	283	spermidine synthase; Provisional	96.7
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.69
PLN02476	278	O-methyltransferase	96.69
PRK06182	273	short chain dehydrogenase; Validated	96.67
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.67
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.67
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.65
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.65
PRK08265	261	short chain dehydrogenase; Provisional	96.64
PLN02366	308	spermidine synthase	96.64
PRK12939	250	short chain dehydrogenase; Provisional	96.63
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.62
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.62
PRK06949	258	short chain dehydrogenase; Provisional	96.61
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.61
PRK07109	334	short chain dehydrogenase; Provisional	96.6
PRK07806	248	short chain dehydrogenase; Provisional	96.59
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.59
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.59
PRK07060	245	short chain dehydrogenase; Provisional	96.59
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	96.56
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.55
PRK07402	196	precorrin-6B methylase; Provisional	96.55
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.54
PRK06057	255	short chain dehydrogenase; Provisional	96.53
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.52
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.49
PRK08267	260	short chain dehydrogenase; Provisional	96.48
PRK12829	264	short chain dehydrogenase; Provisional	96.45
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.44
PRK11207	197	tellurite resistance protein TehB; Provisional	96.44
PRK01581	374	speE spermidine synthase; Validated	96.41
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.41
PRK05872	296	short chain dehydrogenase; Provisional	96.38
PRK12828	239	short chain dehydrogenase; Provisional	96.36
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.36
PRK04457	262	spermidine synthase; Provisional	96.34
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.34
PRK06953	222	short chain dehydrogenase; Provisional	96.33
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.31
PRK06841	255	short chain dehydrogenase; Provisional	96.3
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.3
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.3
PRK05866	293	short chain dehydrogenase; Provisional	96.3
PRK07825	273	short chain dehydrogenase; Provisional	96.29
PRK07831	262	short chain dehydrogenase; Provisional	96.28
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.28
PRK09186	256	flagellin modification protein A; Provisional	96.27
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.27
PRK07832	272	short chain dehydrogenase; Provisional	96.27
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.25
PRK07814	263	short chain dehydrogenase; Provisional	96.22
PRK09291	257	short chain dehydrogenase; Provisional	96.22
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.21
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.19
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.19
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.18
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.17
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.17
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.16
CHL00194	317	ycf39 Ycf39; Provisional	96.16
PRK05867	253	short chain dehydrogenase; Provisional	96.15
PRK06180	277	short chain dehydrogenase; Provisional	96.14
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	96.14
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.13
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.13
PRK07904	253	short chain dehydrogenase; Provisional	96.12
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.11
PRK07677	252	short chain dehydrogenase; Provisional	96.08
PRK06196	315	oxidoreductase; Provisional	96.08
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.08
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.08
PRK08339	263	short chain dehydrogenase; Provisional	96.06
PRK07478	254	short chain dehydrogenase; Provisional	96.04
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.03
PRK07574	385	formate dehydrogenase; Provisional	96.03
PRK06484	520	short chain dehydrogenase; Validated	96.02
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.01
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.01
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.01
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.0
PLN02823	336	spermine synthase	95.99
PRK07062	265	short chain dehydrogenase; Provisional	95.96
PRK05717	255	oxidoreductase; Validated	95.96
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.95
PRK08618	325	ornithine cyclodeaminase; Validated	95.94
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.94
PRK06500	249	short chain dehydrogenase; Provisional	95.94
PRK06128	300	oxidoreductase; Provisional	95.91
PLN03075	296	nicotianamine synthase; Provisional	95.9
PLN02780	320	ketoreductase/ oxidoreductase	95.9
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.9
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.89
PLN03139	386	formate dehydrogenase; Provisional	95.89
PLN02244	340	tocopherol O-methyltransferase	95.88
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.88
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.88
PLN00203	519	glutamyl-tRNA reductase	95.88
PRK07576	264	short chain dehydrogenase; Provisional	95.86
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.84
PRK08643	256	acetoin reductase; Validated	95.83
PRK09072	263	short chain dehydrogenase; Provisional	95.82
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.81
PRK06198	260	short chain dehydrogenase; Provisional	95.8
PRK05875	276	short chain dehydrogenase; Provisional	95.8
PRK08317	241	hypothetical protein; Provisional	95.79
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.79
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.78
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.78
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.76
PRK07454	241	short chain dehydrogenase; Provisional	95.76
PRK05884	223	short chain dehydrogenase; Provisional	95.75
PRK06138	252	short chain dehydrogenase; Provisional	95.75
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.74
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.74
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.73
PRK07890	258	short chain dehydrogenase; Provisional	95.73
PRK08628	258	short chain dehydrogenase; Provisional	95.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.69
PRK07063	260	short chain dehydrogenase; Provisional	95.69
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.69
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.68
PRK05854	313	short chain dehydrogenase; Provisional	95.66
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.66
PRK06172	253	short chain dehydrogenase; Provisional	95.65
PRK06181	263	short chain dehydrogenase; Provisional	95.65
PRK07417	279	arogenate dehydrogenase; Reviewed	95.64
PRK08703	239	short chain dehydrogenase; Provisional	95.64
PRK07774	250	short chain dehydrogenase; Provisional	95.63
PRK07035	252	short chain dehydrogenase; Provisional	95.63
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.63
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.63
PRK06483	236	dihydromonapterin reductase; Provisional	95.61
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.61
PRK07024	257	short chain dehydrogenase; Provisional	95.61
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.6
PRK06194	287	hypothetical protein; Provisional	95.6
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.6
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.59
PRK12937	245	short chain dehydrogenase; Provisional	95.59
PRK06482	276	short chain dehydrogenase; Provisional	95.59
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.59
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.59
PRK06101	240	short chain dehydrogenase; Provisional	95.59
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.58
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.58
PRK06197	306	short chain dehydrogenase; Provisional	95.57
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.57
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.57
PRK09242	257	tropinone reductase; Provisional	95.56
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.55
PRK08862	227	short chain dehydrogenase; Provisional	95.55
PRK12367	245	short chain dehydrogenase; Provisional	95.54
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.54
PRK06914	280	short chain dehydrogenase; Provisional	95.54
PRK04266	226	fibrillarin; Provisional	95.53
PRK08589	272	short chain dehydrogenase; Validated	95.53
PRK08251	248	short chain dehydrogenase; Provisional	95.53
PF07021	193	MetW: Methionine biosynthesis protein MetW; InterP	95.52
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.52
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.51
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.5
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.5
PRK13243	333	glyoxylate reductase; Reviewed	95.5
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.48
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.47
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.46
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.46
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.45
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.43
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	95.42
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.42
PRK08264	238	short chain dehydrogenase; Validated	95.41
PRK06179	270	short chain dehydrogenase; Provisional	95.41
PRK08263	275	short chain dehydrogenase; Provisional	95.41
PRK06125	259	short chain dehydrogenase; Provisional	95.41
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.39
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.38
PLN02253	280	xanthoxin dehydrogenase	95.37
PRK07067	257	sorbitol dehydrogenase; Provisional	95.36
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.36
PRK05876	275	short chain dehydrogenase; Provisional	95.35
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.35
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.34
PRK07577	234	short chain dehydrogenase; Provisional	95.33
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.3
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.3
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.29
PRK07856	252	short chain dehydrogenase; Provisional	95.28
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.28
PRK08226	263	short chain dehydrogenase; Provisional	95.28
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.27
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.27
PRK07985	294	oxidoreductase; Provisional	95.26
PRK06849	389	hypothetical protein; Provisional	95.26
COG2910	211	Putative NADH-flavin reductase [General function p	95.25
PRK06701	290	short chain dehydrogenase; Provisional	95.24
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.24
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.22
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	95.21
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.2
PRK07074	257	short chain dehydrogenase; Provisional	95.2
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.18
PRK08328	231	hypothetical protein; Provisional	95.18
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.16
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.15
PRK10538	248	malonic semialdehyde reductase; Provisional	95.15
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.14
PRK06114	254	short chain dehydrogenase; Provisional	95.13
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.12
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.12
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.11
PRK06484	520	short chain dehydrogenase; Validated	95.07
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.07
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.06
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.06
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.06
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.06
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.05
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.05
PRK06398	258	aldose dehydrogenase; Validated	95.04
PRK06720	169	hypothetical protein; Provisional	95.04
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.04
PRK07340	304	ornithine cyclodeaminase; Validated	95.04
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	95.03
PLN02928	347	oxidoreductase family protein	95.01
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.0
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.0
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.97
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.97
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.95
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.94
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.93
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.89
PF10294	173	Methyltransf_16: Putative methyltransferase; Inter	94.88
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.88
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.88
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.87
KOG0725	270	consensus Reductases with broad range of substrate	94.86
PRK12743	256	oxidoreductase; Provisional	94.86
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.86
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.84
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.83
PLN02256	304	arogenate dehydrogenase	94.8
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.79
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	94.79
PRK05650	270	short chain dehydrogenase; Provisional	94.79
PRK07775	274	short chain dehydrogenase; Provisional	94.74
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.73
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.73
PRK07102	243	short chain dehydrogenase; Provisional	94.72
PRK06940	275	short chain dehydrogenase; Provisional	94.69
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.68
TIGR00452	314	methyltransferase, putative. Known examples to dat	94.63
PRK06436	303	glycerate dehydrogenase; Provisional	94.63
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.63
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.62
PRK08278	273	short chain dehydrogenase; Provisional	94.61
PRK12747	252	short chain dehydrogenase; Provisional	94.61
PLN00016	378	RNA-binding protein; Provisional	94.6
PRK06523	260	short chain dehydrogenase; Provisional	94.59
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.59
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.58
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.55
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.51
PRK08219	227	short chain dehydrogenase; Provisional	94.51
PLN02735	1102	carbamoyl-phosphate synthase	94.51
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.5
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.5
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.49
PRK10669	558	putative cation:proton antiport protein; Provision	94.49
PRK12335	287	tellurite resistance protein TehB; Provisional	94.48
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.47
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.47
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.47
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.45
PRK07791	286	short chain dehydrogenase; Provisional	94.45
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.44
PLN02490	340	MPBQ/MSBQ methyltransferase	94.44
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	94.42
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.42
PRK14030	445	glutamate dehydrogenase; Provisional	94.42
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.4
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.4
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.4
PLN02336	475	phosphoethanolamine N-methyltransferase	94.38
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.35
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.33
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.32
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.32
PRK08303	305	short chain dehydrogenase; Provisional	94.27
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	94.27
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.26
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.25
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.25
PRK12480	330	D-lactate dehydrogenase; Provisional	94.23
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.2
PRK05855	582	short chain dehydrogenase; Validated	94.2
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.14
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	94.13
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.12
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.1
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.1
PRK14902	444	16S rRNA methyltransferase B; Provisional	94.1
PRK14903	431	16S rRNA methyltransferase B; Provisional	94.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.07
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.07
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.06

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=6e-55  Score=377.36  Aligned_cols=312  Identities=45%  Similarity=0.801  Sum_probs=298.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .||.++|||.+|+|++||++|+++++||+|+..+..+||+|.+|+++.+|+|.....+...|...+|+.|+. -+|..+.
T Consensus        54 ~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~  132 (366)
T COG1062          54 GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVY  132 (366)
T ss_pred             CCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCccee
Confidence            499999999999999999999999999999999999999999999999999998877767888899999999 8999999


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                      |+++.++|+||.++++..+++++++.+++.++++.|...|.+.+..+.++++++++|.|.|.|++|++++|-|+..|+.+
T Consensus       133 h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~  212 (366)
T COG1062         133 HYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGR  212 (366)
T ss_pred             eeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCc-cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |++++.+++|++++++||+++++|..+   . ++.+.+.+++++++|++|||+|+...++.+++++.+ ||+.+.+|...
T Consensus       213 IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~  288 (366)
T COG1062         213 IIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAG  288 (366)
T ss_pred             EEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCC
Confidence            999999999999999999999999987   4 699999999999999999999999999999999999 59999999988


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .+...++++..+... .++.|+.++....+.++..+++++.+|++++.++++++++|+|+++||+.|.+++.+|.||.+
T Consensus       289 ~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         289 AGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             CCceeecChHHeecc-ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            788888888888885 999999999988899999999999999999999999999999999999999999999888764

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-54  Score=366.90  Aligned_cols=318  Identities=56%  Similarity=0.984  Sum_probs=300.4

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCcccccccCC
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~~g~~~~g~~~~~~~~~   95 (339)
                      +...||.|+|||.+|+|+++|++|+++++||+|+..+...|+.|.+|+++.+|+|......- .-++.+||+.||. -+|
T Consensus        57 ~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~g  135 (375)
T KOG0022|consen   57 PEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKG  135 (375)
T ss_pred             ccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCC
Confidence            44579999999999999999999999999999999999999999999999999999998762 3345579999999 999


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC  175 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~  175 (339)
                      .+++|+.++++|+||.+++...+.++++..+++.++++.|.++|+|.|+++.+++++|+++.|.|.|++|+++++-||+.
T Consensus       136 k~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~  215 (375)
T KOG0022|consen  136 KPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAA  215 (375)
T ss_pred             CceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+.++|+++.++++.+.++++|+...+|..+.. ..+.+.+.++|++++|+.|||+|+..++.+++.+...+||.-+.+|
T Consensus       216 GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~-~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iG  294 (375)
T KOG0022|consen  216 GASRIIGVDINPDKFEKAKEFGATEFINPKDLK-KPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIG  294 (375)
T ss_pred             CcccEEEEecCHHHHHHHHhcCcceecChhhcc-ccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEE
Confidence            999999999999999999999999999988632 4689999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      ....++.+++.+..++. +.++.|+.+|.+..+.++..+++.+.++++++..+|+|++|++++++||+.|.+++.+|.||
T Consensus       295 v~~~~~~i~~~p~~l~~-GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl  373 (375)
T KOG0022|consen  295 VAAAGQEISTRPFQLVT-GRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVL  373 (375)
T ss_pred             ecCCCcccccchhhhcc-ccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEE
Confidence            98888888888888887 88999999999999999999999999999999999999999999999999999999999888


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      ++
T Consensus       374 ~~  375 (375)
T KOG0022|consen  374 WM  375 (375)
T ss_pred             eC
Confidence            74

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.1e-53  Score=374.74  Aligned_cols=283  Identities=29%  Similarity=0.478  Sum_probs=257.6

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEee-ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ...+|+|||||.+|+|+++|++|++|++||||.+ +...+|+.|.+|++|++|+|++...   +||+.+|          
T Consensus        54 ~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G----------  120 (339)
T COG1064          54 VPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG----------  120 (339)
T ss_pred             CCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC----------
Confidence            3459999999999999999999999999999977 8889999999999999999999775   8888888          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                               +|+||+++|+++++++|+++++++||.+.|++.|+|++|.+ .+++++++|+|+|.|++|.+++|+|+++|
T Consensus       121 ---------Gyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~g  190 (339)
T COG1064         121 ---------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAMG  190 (339)
T ss_pred             ---------cceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHcC
Confidence                     99999999999999999999999999999999999998755 89999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|+++++++++++.++++|++++++.++   ++..+.+++.    +|+++|+++ +..++.+++.|+++ |+++++|.
T Consensus       191 a-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~  260 (339)
T COG1064         191 A-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGL  260 (339)
T ss_pred             C-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECC
Confidence            8 9999999999999999999999999777   6777777664    999999999 77799999999998 99999998


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ........++...+..+++++.|+..++   +.++++++++..+|++.+.  +.+.++++++++||+.|++++.. |+||
T Consensus       261 ~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi  335 (339)
T COG1064         261 PGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVI  335 (339)
T ss_pred             CCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEe
Confidence            7423335577888888999999998877   4689999999999977665  44799999999999999999877 9999


Q ss_pred             EeC
Q 019535          336 WMG  338 (339)
Q Consensus       336 ~~~  338 (339)
                      ++.
T Consensus       336 ~~~  338 (339)
T COG1064         336 DMS  338 (339)
T ss_pred             cCC
Confidence            875

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-51  Score=352.14  Aligned_cols=300  Identities=27%  Similarity=0.465  Sum_probs=263.4

Q ss_pred             CCCCCcccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcc
Q 019535           10 TAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTS   88 (339)
Q Consensus        10 ~~g~~~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~   88 (339)
                      +.|.......+.|+++|||.+|+|.++|++|+++|+||||++-|..+|+.|.+|+.|+||+|++-.|   .+.+ .+|  
T Consensus        50 ~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G--  124 (354)
T KOG0024|consen   50 THGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG--  124 (354)
T ss_pred             ccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC--
Confidence            3455555556899999999999999999999999999999999999999999999999999998886   4433 455  


Q ss_pred             cccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHH
Q 019535           89 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  168 (339)
Q Consensus        89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a  168 (339)
                                       ++++|++.++++++|||+++|++++|++. ++++++||. ++++++.|++|||+|+|++|+++
T Consensus       125 -----------------~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t  185 (354)
T KOG0024|consen  125 -----------------TLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLT  185 (354)
T ss_pred             -----------------ceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHH
Confidence                             99999999999999999999999999998 899999965 67999999999999999999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC-CccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhc
Q 019535          169 AEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       169 ~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                      ...|+++|+.+|+.++..++|++.++++|++.+.+..... .+++.+.++...++ .+|+.|||+|...+++.++..++.
T Consensus       186 ~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~  265 (354)
T KOG0024|consen  186 GLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRS  265 (354)
T ss_pred             HHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhcc
Confidence            9999999999999999999999999999999887665521 23444555555554 699999999999999999999999


Q ss_pred             CCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535          247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      + |++++.|..  .....+++.....|+++++|++-   ..+.+|..+++++.+|+++++++||+.|+++++.+||+.++
T Consensus       266 g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~g~fr---y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~  339 (354)
T KOG0024|consen  266 G-GTVVLVGMG--AEEIQFPIIDVALKEVDLRGSFR---YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQ  339 (354)
T ss_pred             C-CEEEEeccC--CCccccChhhhhhheeeeeeeee---eccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHH
Confidence            8 999888864  55677888888899999998852   22458999999999999999999999999999999999998


Q ss_pred             cCc--eeEEEEEeCC
Q 019535          327 KGK--CLRCVIWMGE  339 (339)
Q Consensus       327 ~~~--~~kvvl~~~~  339 (339)
                      .+.  .+|+++..++
T Consensus       340 ~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  340 HGEEGVIKVIITGPE  354 (354)
T ss_pred             hCcCCceEEEEeCCC
Confidence            877  4599998764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.9e-45  Score=338.64  Aligned_cols=311  Identities=36%  Similarity=0.633  Sum_probs=257.7

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++++++||||++.+..+|+.|.+|+.+.+++|.........|...+|..++. .++..+.
T Consensus        60 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~~~~~~  138 (371)
T cd08281          60 PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLR-LRGGEIN  138 (371)
T ss_pred             CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCccccc-ccCcccc
Confidence            579999999999999999999999999999988888999999999999999986532111121111100000 0000011


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                      +..+.|+|+||+.++++.++++|+++++++|+.+++++.|||+++.+.++++++++|||.|+|++|++++|+|+..|+++
T Consensus       139 ~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~  218 (371)
T cd08281         139 HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQ  218 (371)
T ss_pred             cccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence            11123599999999999999999999999999999999999998888888999999999999999999999999999966


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      |++++++++++++++++|+++++++.+   +++.+.+++++.+++|++|||+|.+..++.++++++++ |+++.+|....
T Consensus       219 Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~  294 (371)
T cd08281         219 VVAVDLNEDKLALARELGATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDP  294 (371)
T ss_pred             EEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCC
Confidence            999999999999999999999999877   78888888887668999999999877799999999997 99999997543


Q ss_pred             CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      .....++...++.|++++.+++.+.+..++++.++++++.+|++++..+++++|+++++++||+.+.++...|.||
T Consensus       295 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         295 EARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             CceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            3345667777888999999987665544567899999999999998888999999999999999999888774443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-45  Score=316.06  Aligned_cols=290  Identities=27%  Similarity=0.433  Sum_probs=252.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEE-eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|+|+|||.+|+|+++|++|++|++|||| +-+...+|..|.+|..+.+++|+...++ ..|+..||+.         
T Consensus        63 s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DGt~---------  132 (360)
T KOG0023|consen   63 SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDGTI---------  132 (360)
T ss_pred             ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCCCC---------
Confidence            5899999999999999999999999999999 6677789999999999999999943222 3677777732         


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                           ..|+||+|+++++.+++++|++++++.||.+.|+..|+|.+| ...++.+|+++.|.|+|++|.+++|+|+++|.
T Consensus       133 -----~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~  206 (360)
T KOG0023|consen  133 -----TQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM  206 (360)
T ss_pred             -----ccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc
Confidence                 245899999999999999999999999999999999999976 55788999999999997799999999999999


Q ss_pred             CEEEEEcCCh-hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~-~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|++++++. ++.+.++.|||+..++..+  ..++.+.+...+++++|-+.+.  ....++.++.+++.+ |++|++|.
T Consensus       207 -rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~  280 (360)
T KOG0023|consen  207 -RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGL  280 (360)
T ss_pred             -EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeC
Confidence             999999987 6677778899999888773  2889999988877777777665  455589999999998 99999998


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      +.  .+..+++.++..+.+.+.|+..|+   +.+.++++++..++.+..+  | +..+++++++||+.|.++... |.||
T Consensus       281 p~--~~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVv  352 (360)
T KOG0023|consen  281 PE--KPLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVV  352 (360)
T ss_pred             cC--CcccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEE
Confidence            64  367888888888899999998887   4688999999999977655  5 899999999999999999977 9999


Q ss_pred             EeC
Q 019535          336 WMG  338 (339)
Q Consensus       336 ~~~  338 (339)
                      ++.
T Consensus       353 D~s  355 (360)
T KOG0023|consen  353 DVS  355 (360)
T ss_pred             Ecc
Confidence            864

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=4.8e-44  Score=331.61  Aligned_cols=315  Identities=47%  Similarity=0.894  Sum_probs=253.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+++++|.+.......|...+|..++. .+|...
T Consensus        54 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~  132 (368)
T cd08300          54 GLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPI  132 (368)
T ss_pred             CCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCccc
Confidence            3689999999999999999999999999999988889999999999999999976431101122222200000 112222


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+..+.|+|+||+.++++.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus       133 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~  212 (368)
T cd08300         133 YHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGAS  212 (368)
T ss_pred             ccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            22334569999999999999999999999999999999999999887888899999999999999999999999999996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++.++++++|+++++++.+ ..+++.+.+.+++++++|++|||+|++..++.+++++++++|+++.+|...
T Consensus       213 ~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~  291 (368)
T cd08300         213 RIIGIDINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA  291 (368)
T ss_pred             eEEEEeCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence            7999999999999999999999998765 012577888888777999999999987779999999977339999999753


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      ......+....+.. +..+.++..+.+..++++.++++++.++++++.++++++|+|+++++||+.+.++...|++|+
T Consensus       292 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         292 AGQEISTRPFQLVT-GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             CCCccccCHHHHhh-cCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            22233344444443 456667666555556778999999999999888889999999999999999988877799885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=3.6e-44  Score=331.34  Aligned_cols=303  Identities=35%  Similarity=0.593  Sum_probs=255.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC-CCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|++|++|++||+|++.+...|+.|.+|+.+++++|...... ...++ .+|         ...
T Consensus        53 ~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~  122 (358)
T TIGR03451        53 EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TEL  122 (358)
T ss_pred             cCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------ccc
Confidence            5799999999999999999999999999999989999999999999999999753210 00000 011         000


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      ....+.|+|+||+.++++.++++|+++++++++.+++++.|+|+++.+..+++++++|||+|+|++|++++|+|+..|++
T Consensus       123 ~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~  202 (358)
T TIGR03451       123 SPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGAS  202 (358)
T ss_pred             ccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            00112359999999999999999999999999999999999998887888899999999999999999999999999996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++++++++.++++++|+++++++.+   +++.+.+++.+++ ++|++|||+|++..++.++++++++ |+++.+|..
T Consensus       203 ~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~  278 (358)
T TIGR03451       203 KIIAVDIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVP  278 (358)
T ss_pred             eEEEEcCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCC
Confidence            6999999999999999999999999877   7888889998887 8999999999877799999999997 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      .......++...++.+++++.+++.+.....+++.++++++.+|++++..+++++|+++++++|++.+++++..|++|.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       279 TPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             CCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence            4333455666677888999998865433335678899999999999888889999999999999999988877788875

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.7e-44  Score=332.99  Aligned_cols=314  Identities=51%  Similarity=0.918  Sum_probs=253.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC----CCCccccccc-
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP----RDQTSRFKDL-   93 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~----~~g~~~~~~~-   93 (339)
                      ..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.+.+++|.+...   .++.    .+|..+++.. 
T Consensus        63 ~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~---~~~~~~~~~~g~~~~~~~~  139 (381)
T PLN02740         63 RAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRV---DPFKSVMVNDGKTRFSTKG  139 (381)
T ss_pred             CCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccc---cccccccccCCCccccccc
Confidence            3679999999999999999999999999999999999999999999999999987542   1110    0010000000 


Q ss_pred             CCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535           94 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR  173 (339)
Q Consensus        94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~  173 (339)
                      .+....+....|+|+||++++.+.++++|+++++++++.+++++.|||+++.+.++++++++|||+|+|++|++++|+|+
T Consensus       140 ~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak  219 (381)
T PLN02740        140 DGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGAR  219 (381)
T ss_pred             CCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH
Confidence            00000111223599999999999999999999999999999999999998878889999999999999999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .+|+++|+++++++++.++++++|++.++++.+ ...++.+.+++++++++|++||++|.+..+..+++++++++|+++.
T Consensus       220 ~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~  298 (381)
T PLN02740        220 ARGASKIIGVDINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL  298 (381)
T ss_pred             HCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEE
Confidence            999866999999999999999999999998765 0124777888877668999999999987799999999882399999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEE
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC  333 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kv  333 (339)
                      +|.......+.+....++ ++.++.|+..+.+....++.++++++.++++++..+++++|+|+++++|++.+.++...|+
T Consensus       299 ~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~  377 (381)
T PLN02740        299 LGIHPTPKMLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRC  377 (381)
T ss_pred             EccCCCCceecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeE
Confidence            997643222344443333 5889998877665544578999999999999888889999999999999999988877899


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      +|++
T Consensus       378 ~~~~  381 (381)
T PLN02740        378 LLHL  381 (381)
T ss_pred             EEeC
Confidence            9874

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.8e-44  Score=330.88  Aligned_cols=316  Identities=47%  Similarity=0.878  Sum_probs=251.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+.+++|.+......+|+..+|.-++. .+|-.+
T Consensus        53 ~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~  131 (368)
T TIGR02818        53 GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPI  131 (368)
T ss_pred             CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcc
Confidence            3579999999999999999999999999999988888999999999999999986432111222222100000 001011


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      ++..+.|+|+||+++|++.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus       132 ~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~  211 (368)
T TIGR02818       132 YHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKAS  211 (368)
T ss_pred             cccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            11122459999999999999999999999999999999999999888888999999999999999999999999999986


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++++.++++|++++++..+ ...++.+.+++++++++|++|||+|++..+..+++++++++|+++.+|...
T Consensus       212 ~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~  290 (368)
T TIGR02818       212 RIIAIDINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAG  290 (368)
T ss_pred             eEEEEcCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccC
Confidence            7999999999999999999999988663 113466778787766899999999987779999999977239999999754


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      ......+....++. +..+.++..+....+.++.++++++.++++++.++++++|+|+++++|++.++++...|++|++
T Consensus       291 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       291 AGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             CCCcccccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            33333444444443 4456666554433345789999999999998888899999999999999999887777999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.4e-43  Score=325.15  Aligned_cols=286  Identities=28%  Similarity=0.437  Sum_probs=248.3

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++|++|++||+|+..+..+|+.|..|+.++.++|.....  .+|+..+|             
T Consensus        53 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------  117 (339)
T cd08239          53 YQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------  117 (339)
T ss_pred             CCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------
Confidence            368999999999999999999999999999999999999999999999999986653  24444444             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                            +|+||++++.+.++++|+++++++|+.+++++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+++
T Consensus       118 ------~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~  190 (339)
T cd08239         118 ------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAED  190 (339)
T ss_pred             ------cceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence                  999999999999999999999999999999999999976 5678889999999999999999999999999944


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.++++++|++.++++++   .+ .+.+.+++.+ ++|++|||+|+...++.++++++++ |+++.+|...
T Consensus       191 vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  265 (339)
T cd08239         191 VIGVDPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG  265 (339)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC
Confidence            999999999999999999999999877   55 6777788777 9999999999988678999999997 9999999753


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      . .... ....++.+++++.+++...   .+++.++++++.++++.+.++++++|+++++++||+.++++...|+||++
T Consensus       266 ~-~~~~-~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         266 E-LTIE-VSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             C-cccC-cHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            2 2222 1235677899999886543   35789999999999998888899999999999999999887656999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3.6e-43  Score=326.06  Aligned_cols=314  Identities=53%  Similarity=0.967  Sum_probs=255.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|..|+.+++++|.........|... ++..++. .+|..
T Consensus        54 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~  132 (369)
T cd08301          54 PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKP  132 (369)
T ss_pred             CCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcc
Confidence            468999999999999999999999999999999899999999999999999998754211112111 0000000 11111


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                      ..++.+.|+|+||+.+++..++++|+++++++++++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+
T Consensus       133 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~  212 (369)
T cd08301         133 IYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGA  212 (369)
T ss_pred             eeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence            12222346999999999999999999999999999999999999988888899999999999999999999999999998


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc-CCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~  256 (339)
                      ++|+++++++++.++++++|++.++++.+. ...+.+.+++++++++|++|||+|.+..+..+++++++ + |+++.+|.
T Consensus       213 ~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~  290 (369)
T cd08301         213 SRIIGVDLNPSKFEQAKKFGVTEFVNPKDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGV  290 (369)
T ss_pred             CeEEEEcCCHHHHHHHHHcCCceEEccccc-chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECc
Confidence            679999999999999999999988876541 12466777777766899999999988778899999999 4 89999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      ........++...++ +++++.++..+.+..+.+++++++++.++++++.++++++|+|+++++||+.+.+++.+|++|.
T Consensus       291 ~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  369 (369)
T cd08301         291 PHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH  369 (369)
T ss_pred             CCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence            643334455544444 5899999877666555678999999999999888888999999999999999999888898873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-43  Score=322.83  Aligned_cols=286  Identities=20%  Similarity=0.299  Sum_probs=238.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++  ++++|++||||+..+..+|+.|.+|+.+.+++|....+   +|.....            
T Consensus        57 ~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~------------  119 (343)
T PRK09880         57 IKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF------------  119 (343)
T ss_pred             ccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc------------
Confidence            468999999999999999  78899999999999999999999999999999987543   3321000            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                        ....|+|+||++++++.++++|+++++++++.. .++++||+++.+ ....++++|||+|+|++|++++|+|+++|++
T Consensus       120 --~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~  195 (343)
T PRK09880        120 --PHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFA-EPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAA  195 (343)
T ss_pred             --CCCCCceeeeEEechHHeEECCCCCCHHHHHhh-cHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence              000249999999999999999999999876644 478899997644 5566899999999999999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|++++++++++++++++|+++++++++   .++.+.. +. .+++|++|||+|.+..++.++++++++ |+++.+|...
T Consensus       196 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~  269 (343)
T PRK09880        196 EIVCADVSPRSLSLAREMGADKLVNPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG  269 (343)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence            7999999999999999999999998876   5544322 21 236999999999977799999999997 9999999753


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~  337 (339)
                        ....+++..++.|++++.++...    .+++.++++++.++++++.++++++|+++++++|++.+.++... |++|.+
T Consensus       270 --~~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        270 --APPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             --CCCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence              23456677788889999887532    35799999999999998888899999999999999999887654 999864

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1e-42  Score=323.25  Aligned_cols=314  Identities=50%  Similarity=0.931  Sum_probs=251.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|++|++|++||+|+..+..+|+.|.+|+.+.+++|...... ..|... +...++. ..|..+
T Consensus        62 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~  139 (378)
T PLN02827         62 LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPV  139 (378)
T ss_pred             CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCccc
Confidence            5789999999999999999999999999999988889999999999999999864210 001000 0000000 000000


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+.-..|+|+||+.++++.++++|+++++++++.+++++.++|+++.+..+++++++|||+|+|++|++++|+|+++|++
T Consensus       140 ~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~  219 (378)
T PLN02827        140 YHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGAS  219 (378)
T ss_pred             ccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            00001359999999999999999999999999999989999998777778899999999999999999999999999996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      .|+++++++++.++++++|+++++++++ ..+++.+.+++++++++|++||++|....+..+++.+++++|+++.+|...
T Consensus       220 ~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~  298 (378)
T PLN02827        220 QIIGVDINPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPK  298 (378)
T ss_pred             eEEEECCCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcC
Confidence            6888888999999999999999988764 013577778887766899999999988768999999999339999999754


Q ss_pred             CCCcccccH-HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      ..  ..+.. ..++.+++++.|+....+....++.++++++.+|++++.++++++|+|+++.+|++.+++++.+|+||.+
T Consensus       299 ~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~  376 (378)
T PLN02827        299 AK--PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM  376 (378)
T ss_pred             CC--ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence            32  23332 3466789999998766554455788999999999998877899999999999999999988878999987


Q ss_pred             C
Q 019535          338 G  338 (339)
Q Consensus       338 ~  338 (339)
                      .
T Consensus       377 ~  377 (378)
T PLN02827        377 P  377 (378)
T ss_pred             c
Confidence            4

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=3.9e-42  Score=314.93  Aligned_cols=292  Identities=28%  Similarity=0.402  Sum_probs=238.9

Q ss_pred             CCCc-ccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPR-ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~-i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..|. ++|||++|+|+++| .++.+++||||++.+..+|+.|.+|+.+.+++|.+..+   +|+...+    .+.     
T Consensus        53 ~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~----~~~-----  119 (350)
T COG1063          53 PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLG----GGI-----  119 (350)
T ss_pred             CCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccc---ccccccc----CCC-----
Confidence            3444 99999999999999 77789999999999999999999999999999995543   3333211    001     


Q ss_pred             ecccccccccceEEeeccceEE-cCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVK-VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                           .|+|+||+.+|.++.++ +|+++++++++ +..++++++++........++.+|+|+|+|++|++++++++..|+
T Consensus       120 -----~G~~aEyv~vp~~~~~~~~pd~~~~~~aa-l~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga  193 (350)
T COG1063         120 -----DGGFAEYVRVPADFNLAKLPDGIDEEAAA-LTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGA  193 (350)
T ss_pred             -----CCceEEEEEeccccCeecCCCCCChhhhh-hcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                 13999999999755555 58888555555 455999998864445555666699999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          178 TRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+|++++.+++|++++++ .|++.+++...   ++..+.+.+.+++ ++|++|||+|....++.++++++++ |+++.+|
T Consensus       194 ~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vG  269 (350)
T COG1063         194 SVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVG  269 (350)
T ss_pred             ceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEe
Confidence            999999999999999999 66766666555   4677888899998 9999999999998899999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc--eeEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRC  333 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kv  333 (339)
                      ....... .++...+..|++++.|+...  ..+.+++.+++++.+|++++..++++.++++++++||+.+.+..  ..|+
T Consensus       270 v~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv  346 (350)
T COG1063         270 VYGGEDI-PLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKV  346 (350)
T ss_pred             ccCCccC-ccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEE
Confidence            8754322 56677888999999998421  22467999999999999999999999999999999999998755  3499


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      ++++
T Consensus       347 ~i~~  350 (350)
T COG1063         347 VLKP  350 (350)
T ss_pred             EecC
Confidence            9864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=7.7e-42  Score=316.53  Aligned_cols=313  Identities=50%  Similarity=0.935  Sum_probs=253.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++++++||+|+..+..+|+.|.+|..+.+++|++..+. ..|+..++..++. ..|...
T Consensus        53 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~-~~~~~~  130 (365)
T cd08277          53 TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFT-CKGKKI  130 (365)
T ss_pred             CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCccccc-cCCccc
Confidence            46789999999999999999999999999999988899999999999999999875421 1222222111100 001011


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .++.+.|+|+||+.++.+.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus       131 ~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~  210 (365)
T cd08277         131 YHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS  210 (365)
T ss_pred             ccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            11223469999999999999999999999999999999999999887888899999999999999999999999999996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++++.++++|++++++..+ ...++.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|...
T Consensus       211 ~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (365)
T cd08277         211 RIIGVDINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP  289 (365)
T ss_pred             eEEEEeCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC
Confidence            7999999999999999999999988765 112356777777766899999999987778999999977239999999764


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      + ....++...+.. +.++.++..+.+..+.++.++++++.++++++.++++++|+++++++|++.+++++..|+++.
T Consensus       290 ~-~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         290 G-AELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             c-cccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            2 233455555554 788888877665545678999999999998888889999999999999999988876688873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=313.59  Aligned_cols=289  Identities=24%  Similarity=0.365  Sum_probs=243.5

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|++|+.+.+++|....+   +|...+|             
T Consensus        52 ~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------  115 (347)
T PRK10309         52 YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------  115 (347)
T ss_pred             CCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------
Confidence            468999999999999999999999999999999999999999999999999976442   3433344             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                            +|+||+.++++.++++|+++++++++.+. ++++++++ .+...++++++|||+|+|++|++++|+|+.+|++.
T Consensus       116 ------~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~  187 (347)
T PRK10309        116 ------GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS  187 (347)
T ss_pred             ------ccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence                  99999999999999999999999998875 56677886 46678889999999999999999999999999955


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-Ccc-EEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+++++++++.+.++++|+++++++++   .+ .+.+.+++.+ ++| ++|||+|....+..++++++++ |+++.+|..
T Consensus       188 v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~  262 (347)
T PRK10309        188 VTAIDINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTL  262 (347)
T ss_pred             EEEECCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccC
Confidence            889999999999999999999998776   44 5567777766 898 9999999987799999999997 999999976


Q ss_pred             CCCCcccc-cHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          258 QPGSQLSL-SSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       258 ~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      ........ .+..++.+++++.+++.+...  .+++++++++++++|++++.++++++|+|+++++|++.+.++... |+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKv  342 (347)
T PRK10309        263 HHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKV  342 (347)
T ss_pred             CCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEE
Confidence            43211111 223567789999998654321  135788999999999998888999999999999999999888765 99


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      ++++
T Consensus       343 vv~~  346 (347)
T PRK10309        343 LLQI  346 (347)
T ss_pred             EEeC
Confidence            9876

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=3.5e-42  Score=307.47  Aligned_cols=270  Identities=20%  Similarity=0.330  Sum_probs=224.8

Q ss_pred             ccCCceeEEEEEecCCCC------CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           24 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        24 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|+.|.+|+.+++++|.+..+   +|+...+           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~-----------   66 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD-----------   66 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence            589999999999999999      89999999999999999999999999999987553   3322100           


Q ss_pred             eecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                       ......|+|+||+++++. .++++|+++++++++.+++++.|+|+++. .....++++|||+|+|++|++++|+|+.+|
T Consensus        67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence             000012399999999997 79999999999999999999999999764 455668999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +++|+++++++++.++++++|++.+++..+     ..+.+.+++.+ ++|++||++|.+..++.++++++++ |+++.+|
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G  218 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG  218 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence            955999998999999999999998887644     24566677776 8999999999888899999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhC--CCCCCcccceeeechhhH
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD--KELELDKFVTHEMKFEEI  318 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~--g~l~~~~~i~~~~~l~~~  318 (339)
                      .........+++..++.|++++.++....   .++++++++++.+  +++++.++++++|+|+++
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            75433345677778888999999875332   3579999999987  467777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.7e-41  Score=314.51  Aligned_cols=296  Identities=23%  Similarity=0.294  Sum_probs=232.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCcccccccCCc
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~g~~~~g~~~~~~~~~~   96 (339)
                      .+|.++|||++|+|+++|++|++|++||||++.+...|+.|.+|+.+++++|.+..+.   ..+|+...|     ..   
T Consensus        60 ~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-----~~---  131 (393)
T TIGR02819        60 PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-----GW---  131 (393)
T ss_pred             CCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC-----CC---
Confidence            5799999999999999999999999999999999999999999999999999864210   002221000     00   


Q ss_pred             eeecccccccccceEEeecc--ceEEcCCCCCc----cccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE  170 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~  170 (339)
                             .|+|+||+++++.  .++++|++++.    .+++.+.+++.|+|+++ ...+++++++|||.|+|++|++++|
T Consensus       132 -------~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiq  203 (393)
T TIGR02819       132 -------VGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAA  203 (393)
T ss_pred             -------CCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHH
Confidence                   1499999999964  79999998754    34667777999999976 4578999999999989999999999


Q ss_pred             HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH--------------H
Q 019535          171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------S  235 (339)
Q Consensus       171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~--------------~  235 (339)
                      +|+.+|++.|+++++++++++.++++|++.+....+   .++.+.+.+++++ ++|++|||+|.+              .
T Consensus       204 lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~  280 (393)
T TIGR02819       204 SAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPAT  280 (393)
T ss_pred             HHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHH
Confidence            999999955666677888999999999975433333   4677788888877 899999999985              3


Q ss_pred             HHHHHHHHhhcCCcEEEEeccCCCCCc-----------ccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          236 LVQEAYACCRKGWGKTIVLGVDQPGSQ-----------LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       236 ~~~~~~~~l~~~~G~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      .++.++++++++ |+++.+|.......           ..+.....+.+++++.+..   ....+.+.++++++.+|+++
T Consensus       281 ~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~  356 (393)
T TIGR02819       281 VLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQ  356 (393)
T ss_pred             HHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCC
Confidence            699999999998 99999998532111           1233344455566666531   11112346799999999999


Q ss_pred             Ccccce-eeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535          305 LDKFVT-HEMKFEEINSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       305 ~~~~i~-~~~~l~~~~~A~~~~~~~~~~kvvl~~~  338 (339)
                      +..+++ ++|+|+++++||+.+.++...|++|+++
T Consensus       357 ~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       357 IAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH  391 (393)
T ss_pred             HHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence            887777 7899999999999998887779999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=8.2e-41  Score=307.93  Aligned_cols=287  Identities=24%  Similarity=0.384  Sum_probs=244.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+ +||+|++.+..+|+.|..|+.+++++|....+   .|+..+|            
T Consensus        51 ~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G------------  114 (349)
T TIGR03201        51 HALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG------------  114 (349)
T ss_pred             CCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC------------
Confidence            3679999999999999999999887 99999999999999999999999999976443   3433334            


Q ss_pred             ecccccccccceEEeeccceEEcCC------CCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDP------TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA  172 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la  172 (339)
                             +|+||+.++++.++++|+      ++++++++.+++++.|+|+++. ..+++++++|+|+|+|++|++++|+|
T Consensus       115 -------~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a  186 (349)
T TIGR03201       115 -------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTA  186 (349)
T ss_pred             -------cccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHH
Confidence                   999999999999999999      8999999999999999999764 57889999999999999999999999


Q ss_pred             HHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-Ccc----EEEEcCCCHHHHHHHHHHhhcC
Q 019535          173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKG  247 (339)
Q Consensus       173 ~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d----~v~d~~g~~~~~~~~~~~l~~~  247 (339)
                      +.+|+ +|+++++++++.++++++|+++++++.+...+++.+.+++++++ ++|    ++|||+|+....+.++++++++
T Consensus       187 ~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~  265 (349)
T TIGR03201       187 KAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG  265 (349)
T ss_pred             HHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence            99999 89999999999999999999999987651113567778888877 886    8999999988788999999997


Q ss_pred             CcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535          248 WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK  327 (339)
Q Consensus       248 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  327 (339)
                       |+++.+|....  ...+++..++.++.++.+.+...   .+++.++++++++|++++..++ ++|+|+++++||+.+.+
T Consensus       266 -G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~  338 (349)
T TIGR03201       266 -GTLVVVGYTMA--KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHH  338 (349)
T ss_pred             -CeEEEECcCCC--CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHc
Confidence             99999997642  23556667777788888875322   3578999999999999877777 47999999999999998


Q ss_pred             Ccee-EEEEEe
Q 019535          328 GKCL-RCVIWM  337 (339)
Q Consensus       328 ~~~~-kvvl~~  337 (339)
                      +... |+++++
T Consensus       339 ~~~~~k~~~~~  349 (349)
T TIGR03201       339 HKLKRRAILTP  349 (349)
T ss_pred             CCccceEEecC
Confidence            8766 888753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=6.8e-41  Score=309.27  Aligned_cols=282  Identities=24%  Similarity=0.386  Sum_probs=231.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCC-CCC---CCCCCCcccccccC
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFK-ISP---WMPRDQTSRFKDLR   94 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~-~~~---g~~~~g~~~~~~~~   94 (339)
                      .+|.++|||++|+|+++|++|++|++||+|++.+. .+|+.|.+|+.+.+++|++..+. ...   |...+         
T Consensus        65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~---------  135 (360)
T PLN02586         65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY---------  135 (360)
T ss_pred             CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCC---------
Confidence            57999999999999999999999999999986554 48999999999999999865421 000   11122         


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL  174 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~  174 (339)
                                |+|+||++++++.++++|+++++++++.+++++.|+|+++.....++++++|||.|+|++|++++|+|+.
T Consensus       136 ----------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~  205 (360)
T PLN02586        136 ----------GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKA  205 (360)
T ss_pred             ----------CccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHH
Confidence                      3999999999999999999999999999999999999987666667889999999999999999999999


Q ss_pred             cCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          175 CGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      +|+ +|++++.++++ .+.++++|++++++..+   .   +.+++.++ ++|++||++|....++.++++++++ |+++.
T Consensus       206 ~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~  276 (360)
T PLN02586        206 FGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLIT  276 (360)
T ss_pred             CCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEE
Confidence            999 78887766655 45667899999987655   2   24455443 6999999999877789999999997 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      +|...  ....+++..++.++..+.++..+.   ..++.++++++.+|++++.  + ++|+|+++++||+.+.+++.. |
T Consensus       277 vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gk  348 (360)
T PLN02586        277 LGLPE--KPLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYR  348 (360)
T ss_pred             eCCCC--CCCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEE
Confidence            98653  234566667777788877775443   3568999999999988753  4 689999999999999988865 9


Q ss_pred             EEEEe
Q 019535          333 CVIWM  337 (339)
Q Consensus       333 vvl~~  337 (339)
                      +|+.+
T Consensus       349 vvi~~  353 (360)
T PLN02586        349 FVIDV  353 (360)
T ss_pred             EEEEc
Confidence            99876

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-40  Score=308.12  Aligned_cols=282  Identities=26%  Similarity=0.404  Sum_probs=233.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCC----CCCCCCCCcccccccC
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLR   94 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~   94 (339)
                      .+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|.+|+.+++++|++..+..    ..|...+         
T Consensus        59 ~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~---------  129 (375)
T PLN02178         59 RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ---------  129 (375)
T ss_pred             CCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC---------
Confidence            579999999999999999999999999999876654 69999999999999998754210    0011112         


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHH
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGAR  173 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~  173 (339)
                                |+|+||++++++.++++|+++++++++.+++++.|+|+++..... .+++++|+|.|+|++|++++|+|+
T Consensus       130 ----------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak  199 (375)
T PLN02178        130 ----------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGK  199 (375)
T ss_pred             ----------CccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHH
Confidence                      399999999999999999999999999999999999997654432 368999999999999999999999


Q ss_pred             HcCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          174 LCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+|+ +|++++.++++ .++++++|+++++++.+   .   +.+.+.++ ++|++|||+|.+..++.++++++++ |+++
T Consensus       200 ~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv  270 (375)
T PLN02178        200 AFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLV  270 (375)
T ss_pred             HcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEE
Confidence            9999 78888876544 67888999999988654   2   34555543 6999999999987689999999997 9999


Q ss_pred             EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      .+|...  ....+++..++.+++++.++..+.   .+++.++++++.+|++++.  + ++|+|+++++||+.+.+++.. 
T Consensus       271 ~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~g  342 (375)
T PLN02178        271 ALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRY  342 (375)
T ss_pred             EEccCC--CCCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCce
Confidence            999753  234566777788899999876543   3578999999999988654  4 679999999999999988765 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+|+.+
T Consensus       343 kvvi~~  348 (375)
T PLN02178        343 RFVIDV  348 (375)
T ss_pred             EEEEEe
Confidence            999886

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4e-41  Score=304.45  Aligned_cols=266  Identities=25%  Similarity=0.341  Sum_probs=223.2

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..++|+|+|.|++|+|+++|++|++|++||||+..+.                         .+  .+            
T Consensus        54 ~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~-------------------------~~--~~------------   94 (326)
T COG0604          54 VRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG-------------------------VG--RD------------   94 (326)
T ss_pred             CCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccC-------------------------CC--CC------------
Confidence            3469999999999999999999999999999975420                         00  12            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|+||+.+|++.++++|+++|+++||+++++++|||+++....+++++++|||+|+ |++|++++|||+++|
T Consensus        95 -------G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G  167 (326)
T COG0604          95 -------GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALG  167 (326)
T ss_pred             -------CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence                   399999999999999999999999999999999999999999899999999999975 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + .++++..++++.++++++|+++++++.+   .++.+++++++++ ++|+|||++|+.. +..++++++++ |+++.+|
T Consensus       168 ~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig  241 (326)
T COG0604         168 A-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIG  241 (326)
T ss_pred             C-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEe
Confidence            8 6666666778777999999999999988   8899999999999 9999999999999 88899999998 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCC--C-CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc-Ccee
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGL--K-AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL  331 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~-~~~~  331 (339)
                      ...+.....++...++.+.++..+......  . ..+.+.++.+++.+|++++.  ++++||+++..++...... ++..
T Consensus       242 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~  319 (326)
T COG0604         242 ALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTT  319 (326)
T ss_pred             cCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCc
Confidence            875434555667777878888888765533  1 12346778999999977654  7789999995444443333 3544


Q ss_pred             -EEEEEe
Q 019535          332 -RCVIWM  337 (339)
Q Consensus       332 -kvvl~~  337 (339)
                       |+||++
T Consensus       320 GKvvl~~  326 (326)
T COG0604         320 GKVVLKV  326 (326)
T ss_pred             ceEEEeC
Confidence             999874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=9.3e-40  Score=302.41  Aligned_cols=300  Identities=27%  Similarity=0.402  Sum_probs=248.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCC------cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 019535           19 AVFPRILGHEAIGVVESVGENVDG------VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD   92 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~   92 (339)
                      ..+|.++|||++|+|+++|++|+.      |++||+|+..+..+|+.|.+|+.+++++|....+   +|...+-      
T Consensus        52 ~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~------  122 (361)
T cd08231          52 VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASC------  122 (361)
T ss_pred             CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccc------
Confidence            467899999999999999999986      9999999999999999999999999999987654   3332110      


Q ss_pred             cCCceeecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHH
Q 019535           93 LRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG  171 (339)
Q Consensus        93 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~l  171 (339)
                        +    .....|+|+||+.++++ +++++|++++.++++++++++.|||+++.+....+++++|||+|+|.+|++++++
T Consensus       123 --~----~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~l  196 (361)
T cd08231         123 --D----DPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAA  196 (361)
T ss_pred             --c----CCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence              0    00012499999999996 8999999999999999989999999988776666689999999989999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      |+.+|+++|+++++++++.++++++|++.++++++....++.+.+.+++++ ++|++|||+|+...++.++++++++ |+
T Consensus       197 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~  275 (361)
T cd08231         197 AKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GT  275 (361)
T ss_pred             HHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CE
Confidence            999999779999999999999999999988887651112233577888877 9999999999876689999999997 99


Q ss_pred             EEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC--CCCCcccceeeechhhHHHHHHHHhcC
Q 019535          251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       251 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g--~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      ++.+|.........++...++.+++++.+++...   .+++.++++++.++  ++.+.++++++|+++++++|++.++++
T Consensus       276 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~  352 (361)
T cd08231         276 YVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESG  352 (361)
T ss_pred             EEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcC
Confidence            9999975433344566666788899998876432   45788899999887  666777788999999999999999888


Q ss_pred             ceeEEEEEe
Q 019535          329 KCLRCVIWM  337 (339)
Q Consensus       329 ~~~kvvl~~  337 (339)
                      ...|++|++
T Consensus       353 ~~~k~vi~~  361 (361)
T cd08231         353 TALKVVIDP  361 (361)
T ss_pred             CceEEEeCC
Confidence            767999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=298.29  Aligned_cols=283  Identities=26%  Similarity=0.458  Sum_probs=247.5

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|.+|+.+.+++|....+   +|+. .+             
T Consensus        63 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------  126 (351)
T cd08233          63 TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------  126 (351)
T ss_pred             CCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------
Confidence            479999999999999999999999999999998889999999999999999976543   3322 12             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                            |+|++|+.++.+.++++|+++++++++.+ .++.|||+++ ...+++++++|||+|+|.+|++++|+|+.+|++
T Consensus       127 ------g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~  198 (351)
T cd08233         127 ------GGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGAS  198 (351)
T ss_pred             ------CceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                  39999999999999999999999998876 5788999987 778899999999999899999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++++++++.++++++|++.++++++   .++.+.+++++++ ++|++||++|....++.++++++++ |+++.+|..
T Consensus       199 ~v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  274 (351)
T cd08233         199 KIIVSEPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIW  274 (351)
T ss_pred             EEEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccC
Confidence            7899998999999999999999999887   7888889888877 8999999999876699999999997 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH-HHHHHHHhcCce--eEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCV  334 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~-~~A~~~~~~~~~--~kvv  334 (339)
                      .  ....+++..++.+++++.+.....   ++++++++++++++++++.++++++|+++++ ++|++.+.+++.  .|++
T Consensus       275 ~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v  349 (351)
T cd08233         275 E--KPISFNPNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKIL  349 (351)
T ss_pred             C--CCCccCHHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEE
Confidence            4  335667777888899998875432   4679999999999999877778899999996 799999988874  5888


Q ss_pred             E
Q 019535          335 I  335 (339)
Q Consensus       335 l  335 (339)
                      |
T Consensus       350 ~  350 (351)
T cd08233         350 V  350 (351)
T ss_pred             e
Confidence            7

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6e-39  Score=297.20  Aligned_cols=311  Identities=41%  Similarity=0.778  Sum_probs=258.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.+++|.....+-..|...+|+.++.- +|...
T Consensus        51 ~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~  129 (365)
T cd05279          51 TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPI  129 (365)
T ss_pred             CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCcc
Confidence            35678999999999999999999999999999988889999999999999999876542112322334333331 33334


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      +++.+.|+|++|+.++++.++++|+++++++++.+.+++.+||+++.+.+++.++++|||+|+|++|++++++|+.+|+.
T Consensus       130 ~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~  209 (365)
T cd05279         130 HHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGAS  209 (365)
T ss_pred             ccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            45555679999999999999999999999999999999999999888888999999999998899999999999999995


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCc--cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhh-cCCcEEEEec
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLG  255 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~--~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g  255 (339)
                      .|+++++++++.+.++++|++++++.++   .  ++.+.+.+++++++|++||++|....++.++++++ ++ |+++.+|
T Consensus       210 ~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g  285 (365)
T cd05279         210 RIIAVDINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVG  285 (365)
T ss_pred             eEEEEeCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEe
Confidence            6888888899999999999999988776   4  67777888775599999999997666899999999 97 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      .........++...+ .++.++.+++.+.+...+.+..+++++.++.+.+.++++++|+++++++|++.+++++..|+++
T Consensus       286 ~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~  364 (365)
T cd05279         286 VPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL  364 (365)
T ss_pred             cCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            753233455666666 5678888877666656678899999999998877667789999999999999998877778776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-39  Score=296.32  Aligned_cols=272  Identities=21%  Similarity=0.254  Sum_probs=230.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|+++++|++||+|++.+. .+|+.|.+|+.+.+++|.+..+   +|+..+|            
T Consensus        55 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G------------  119 (329)
T TIGR02822        55 RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG------------  119 (329)
T ss_pred             CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC------------
Confidence            34799999999999999999999999999987654 4799999999999999987654   4544444            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|+||+.++++.++++|+++++++++.+++++.|||+++ ..++++++++|||+|+|++|++++|+|+..|+ 
T Consensus       120 -------~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-  190 (329)
T TIGR02822       120 -------GYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-  190 (329)
T ss_pred             -------cceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-
Confidence                   999999999999999999999999999999999999987 45789999999999999999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|++++++++++++++++|++++++..+   ..         .+++|+++++.+....++.++++++++ |+++.+|...
T Consensus       191 ~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~  257 (329)
T TIGR02822       191 TVHVMTRGAAARRLALALGAASAGGAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHL  257 (329)
T ss_pred             eEEEEeCChHHHHHHHHhCCceeccccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccC
Confidence            8999999999999999999999987543   11         126899999888777899999999997 9999999743


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      .. ...++...++.+++++.+++..   .++++.++++++.+++++   +++++|+|+++++||+.+.+++.. |+||
T Consensus       258 ~~-~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       258 TD-TPPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             cc-CCCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            22 2245556667788998887533   235688899999999875   357999999999999999988876 8887

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=2.1e-38  Score=294.17  Aligned_cols=314  Identities=43%  Similarity=0.778  Sum_probs=247.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.++.|+........|...++..++. .+|....
T Consensus        59 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~  137 (373)
T cd08299          59 PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIH  137 (373)
T ss_pred             CCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccc
Confidence            578999999999999999999999999999988888999999999999999986542100121111111110 1111122


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                      ++.+.|+|+||++++++.++++|+++++++++.+++++.|||+++...++++++++|||+|+|++|++++++|+..|+++
T Consensus       138 ~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~  217 (373)
T cd08299         138 HFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASR  217 (373)
T ss_pred             cccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            22235699999999999999999999999999999999999998888889999999999998999999999999999867


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHh-hcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.+.++++|++++++..+. ..++.+.+.+++.+++|++|||+|.+..+..++..+ +++ |+++.+|...
T Consensus       218 Vi~~~~~~~~~~~a~~lGa~~~i~~~~~-~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~  295 (373)
T cd08299         218 IIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPP  295 (373)
T ss_pred             EEEEcCCHHHHHHHHHcCCceEeccccc-chhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCC
Confidence            9999999999999999999999887640 123667777776668999999999866677767655 566 9999999764


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      ......+....+ .++.++.++..+.+..++++.++++.+.++.+++.++++++|+++++.+|++.+.+++..|+++.+
T Consensus       296 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         296 SSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             CCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            322344444333 457888888776655456677888888888777777788999999999999999887767888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=8.6e-39  Score=295.19  Aligned_cols=282  Identities=26%  Similarity=0.372  Sum_probs=222.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|+.+++++|....+. ..|.. .+             
T Consensus        56 ~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~-------------  120 (355)
T cd08230          56 EDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH-------------  120 (355)
T ss_pred             CCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------
Confidence            57899999999999999999 9999999999888889999999999999999865421 11211 12             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH------hcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGA  172 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~------~~~~~~~~~VLI~G~G~iG~~a~~la  172 (339)
                            |+|+||++++++.++++|++++ +++ .+..++++++.++..      ..+++++++|||+|+|++|++++|+|
T Consensus       121 ------G~~aey~~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~a  192 (355)
T cd08230         121 ------GFMREYFVDDPEYLVKVPPSLA-DVG-VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLL  192 (355)
T ss_pred             ------ccceeEEEeccccEEECCCCCC-cce-eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHH
Confidence                  3999999999999999999998 444 344466666554322      22356899999999999999999999


Q ss_pred             HHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCc
Q 019535          173 RLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG  249 (339)
Q Consensus       173 ~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G  249 (339)
                      +++|+ +|+++++   ++++++.++++|++. +++.+   +++.+ .+  ..+++|+||||+|.+..++.++++++++ |
T Consensus       193 k~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G  263 (355)
T cd08230         193 RLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-G  263 (355)
T ss_pred             HHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-c
Confidence            99999 8999987   678999999999986 46555   44433 21  2238999999999887789999999997 9


Q ss_pred             EEEEeccCCCCCccccc----HHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCC----CCcccceeeechhhHHHH
Q 019535          250 KTIVLGVDQPGSQLSLS----SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSA  321 (339)
Q Consensus       250 ~~v~~g~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l----~~~~~i~~~~~l~~~~~A  321 (339)
                      +++.+|...+.....++    ...++.|++++.|+....   ++++.++++++.++.+    .+.++++++|+++++.+|
T Consensus       264 ~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a  340 (355)
T cd08230         264 VVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEA  340 (355)
T ss_pred             EEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHH
Confidence            99999976542334444    345677899999875433   4578889999988762    356678999999999999


Q ss_pred             HHHHhcCceeEEEEEe
Q 019535          322 FDLLIKGKCLRCVIWM  337 (339)
Q Consensus       322 ~~~~~~~~~~kvvl~~  337 (339)
                      |+.++++. .|++|.+
T Consensus       341 ~~~~~~~~-~K~v~~~  355 (355)
T cd08230         341 LTEKPDGE-IKVVIEW  355 (355)
T ss_pred             HHhcccCC-eEEEeeC
Confidence            99886543 5999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.8e-38  Score=288.77  Aligned_cols=286  Identities=23%  Similarity=0.355  Sum_probs=231.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCce
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGET   97 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~   97 (339)
                      .+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|+.+.+++|....+.  ++. ...|           
T Consensus        62 ~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~--~~~~~~~g-----------  128 (357)
T PLN02514         62 NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWS--YNDVYTDG-----------  128 (357)
T ss_pred             CCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCcccc--ccccccCC-----------
Confidence            579999999999999999999999999999865543 6999999999999999865321  000 0001           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                         ....|+|+||++++...++++|+++++++++.+++++.|||+++......+++++|+|+|+|++|++++|+|+.+|+
T Consensus       129 ---~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~  205 (357)
T PLN02514        129 ---KPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH  205 (357)
T ss_pred             ---ccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC
Confidence               00124999999999999999999999999999999999999987665666789999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.+ +++|++.+++..+   .   +.+.+.+. ++|++|||+|....++.++++++++ |+++.+|.
T Consensus       206 -~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~  276 (357)
T PLN02514        206 -HVTVISSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGV  276 (357)
T ss_pred             -eEEEEeCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECC
Confidence             788888777766554 6699988776544   2   23444433 6999999999876689999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ...  ...++...++.++.++.++..+.   ..++.++++++.+|++.  +++ ++|+|+++.+||+.++++... |+++
T Consensus       277 ~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~  348 (357)
T PLN02514        277 INT--PLQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVV  348 (357)
T ss_pred             CCC--CCcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEE
Confidence            632  34566667778899999986544   35789999999999764  445 689999999999999998876 9999


Q ss_pred             EeC
Q 019535          336 WMG  338 (339)
Q Consensus       336 ~~~  338 (339)
                      +++
T Consensus       349 ~~~  351 (357)
T PLN02514        349 DVA  351 (357)
T ss_pred             Ecc
Confidence            875

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1e-38  Score=264.30  Aligned_cols=263  Identities=22%  Similarity=0.291  Sum_probs=227.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..++|++||-|.+|+|+++|++|+++++||||+....                                           
T Consensus        61 ~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~-------------------------------------------   97 (336)
T KOG1197|consen   61 PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP-------------------------------------------   97 (336)
T ss_pred             CCCCCcCCCcccceEEEEecCCccccccccEEEEecc-------------------------------------------
Confidence            4578999999999999999999999999999963211                                           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~~~G  176 (339)
                            .|.|+|+..+|...++++|+.+++++||++...+.|||..+.+..++++|++||++. +|++|+++.|++|..|
T Consensus        98 ------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~  171 (336)
T KOG1197|consen   98 ------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVG  171 (336)
T ss_pred             ------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcC
Confidence                  139999999999999999999999999999999999999899999999999999996 4999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + .+|++.+++++++.+++.|+.+.|+++.   +|+.++++++++| |+|+++|.+|... +...+.+|++. |.+|.+|
T Consensus       172 a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG  245 (336)
T KOG1197|consen  172 A-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFG  245 (336)
T ss_pred             c-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEec
Confidence            9 9999999999999999999999999999   9999999999988 9999999999988 99999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeee-cCCCCCCCcH----HHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSL-FGGLKAKSDI----PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~----~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ...+ ..-++++..+..+.+++.... ++-...+.+|    .+++.++.+|.+++.  |.++|||+++.+|+..+++...
T Consensus       246 ~asg-l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrkt  322 (336)
T KOG1197|consen  246 NASG-LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKT  322 (336)
T ss_pred             cccC-CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhc
Confidence            8643 334455555666666665443 3333333333    467778888977665  8999999999999999999887


Q ss_pred             e-EEEEEeC
Q 019535          331 L-RCVIWMG  338 (339)
Q Consensus       331 ~-kvvl~~~  338 (339)
                      . |+++.+.
T Consensus       323 vGkvlLlp~  331 (336)
T KOG1197|consen  323 VGKVLLLPG  331 (336)
T ss_pred             cceEEEeCC
Confidence            6 9998764

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2.5e-37  Score=286.42  Aligned_cols=312  Identities=33%  Similarity=0.570  Sum_probs=247.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce-
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET-   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~-   97 (339)
                      ..+|.++|||++|+|+++|++++.|++||+|++.+. .|+.|.+|+.+.+++|.........|...+|.....+..|-. 
T Consensus        53 ~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (365)
T cd08278          53 TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPV  131 (365)
T ss_pred             CCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCccc
Confidence            357889999999999999999999999999998764 899999999999999975432111121111100000000000 


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                      -.++++.|+|++|+.++++.++++|+++++++++.+++++.||+.++.+...++++++|||+|+|.+|++++|+|+.+|+
T Consensus       132 ~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~  211 (365)
T cd08278         132 HGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGC  211 (365)
T ss_pred             ccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence            00123346999999999999999999999999999999999999988888889999999999889999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +.++++++++++.+.++++|++.++++++   .++.+.+.+++++++|+++||+|.+..+..++++++++ |+++.+|..
T Consensus       212 ~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~  287 (365)
T cd08278         212 TTIIAVDIVDSRLELAKELGATHVINPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAP  287 (365)
T ss_pred             CeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcC
Confidence            77999999999999999999999998877   67888888887339999999999876689999999997 999999875


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      .......+++..++.++.++.++........+.+.++++++.++.+.+..++ ..|+++++++|++.++++...|++|.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         288 PPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             CCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence            3223345666666677899888765433334557889999999988553444 68999999999999988877788873

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=7.8e-37  Score=281.80  Aligned_cols=293  Identities=27%  Similarity=0.360  Sum_probs=238.7

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++++++++||+|+..+..+|+.|..|..++++.|........++...+             
T Consensus        51 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------  117 (351)
T cd08285          51 ERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------  117 (351)
T ss_pred             CCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------
Confidence            3568999999999999999999999999999988778999999999999999975421100111122             


Q ss_pred             ecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           99 HHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                            |+|+||+.++.+  .++++|+++++++++.++.++.||+++ .+..+++++++|||+|+|++|++++|+|+.+|
T Consensus       118 ------g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G  190 (351)
T cd08285         118 ------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRG  190 (351)
T ss_pred             ------cceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                  399999999974  899999999999999998899999997 47788999999999988999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ++.|+++++++++.+.++++|+++++++++   .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|
T Consensus       191 ~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g  266 (351)
T cd08285         191 AGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVN  266 (351)
T ss_pred             CCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEec
Confidence            966899999999999999999999998877   6788888888776 8999999999877789999999997 9999998


Q ss_pred             cCCCCCcccccH--HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCccc-ceeeechhhHHHHHHHHhcCce--
Q 019535          256 VDQPGSQLSLSS--FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKC--  330 (339)
Q Consensus       256 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-i~~~~~l~~~~~A~~~~~~~~~--  330 (339)
                      .........++.  .....+..++.+...  ....+++.++++++.+|++.+..+ +.++++++++++|++.+.+++.  
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~  344 (351)
T cd08285         267 YYGEDDYLPIPREEWGVGMGHKTINGGLC--PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDL  344 (351)
T ss_pred             ccCCCceeecChhhhhhhccccEEEEeec--CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCe
Confidence            764322233332  222234555554321  112467899999999999887443 4456999999999999988863  


Q ss_pred             eEEEEEe
Q 019535          331 LRCVIWM  337 (339)
Q Consensus       331 ~kvvl~~  337 (339)
                      .|++|++
T Consensus       345 ~k~~~~~  351 (351)
T cd08285         345 IKPVIIF  351 (351)
T ss_pred             EEEEEeC
Confidence            5999874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-36  Score=278.09  Aligned_cols=284  Identities=19%  Similarity=0.395  Sum_probs=235.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ++|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..+++++|.+..+   +++..+|             
T Consensus        52 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  115 (339)
T PRK10083         52 KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------  115 (339)
T ss_pred             CCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------
Confidence            579999999999999999999999999999999999999999999999999975542   2322233             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH-cCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~-~G~~  178 (339)
                            +|+||+.++.+.++++|++++++.++ +..++.++++ +....+++++++|+|+|+|++|++++|+|+. +|++
T Consensus       116 ------~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~  187 (339)
T PRK10083        116 ------GFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVK  187 (339)
T ss_pred             ------cceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCC
Confidence                  99999999999999999999998876 4457888886 5677889999999999999999999999996 5996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .++++++++++.+.++++|++.++++++   .++.+.+..  .+ ++|++||++|.+..+..++++++++ |+++.+|..
T Consensus       188 ~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  261 (339)
T PRK10083        188 AVIVADRIDERLALAKESGADWVINNAQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFS  261 (339)
T ss_pred             EEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccC
Confidence            6888888899999999999999998876   566666643  23 5789999999876799999999997 999999875


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc-e-eEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVI  335 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl  335 (339)
                      ..  ...+....+..+++++.+...    ..+.++++++++.++++.+..+++++|+++++++|++.+.++. . .|+++
T Consensus       262 ~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv  335 (339)
T PRK10083        262 SE--PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLL  335 (339)
T ss_pred             CC--CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEE
Confidence            32  233344445567777776542    2457899999999998876555779999999999999998653 3 49999


Q ss_pred             EeCC
Q 019535          336 WMGE  339 (339)
Q Consensus       336 ~~~~  339 (339)
                      +++|
T Consensus       336 ~~~~  339 (339)
T PRK10083        336 TFAE  339 (339)
T ss_pred             ecCC
Confidence            9875

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.8e-36  Score=276.17  Aligned_cols=279  Identities=23%  Similarity=0.384  Sum_probs=238.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|+.++++.|....+   .|+..+|            
T Consensus        53 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g------------  117 (333)
T cd08296          53 SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG------------  117 (333)
T ss_pred             CCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC------------
Confidence            5688999999999999999999999999998744 56899999999999999987653   4443334            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             ++++|+.++.+.++++|+++++++++.+++++.|||+++.. .++.++++|||+|+|++|++++++|+.+|+ 
T Consensus       118 -------~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-  188 (333)
T cd08296         118 -------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-  188 (333)
T ss_pred             -------cceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence                   99999999999999999999999999999999999998754 589999999999999999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++.+.++++|+++++++.+   .++.+.+.++  +++|++||+.|.+..++.++++++++ |+++.+|...
T Consensus       189 ~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  262 (333)
T cd08296         189 RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG  262 (333)
T ss_pred             eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC
Confidence            8999999999999999999999998877   6677777665  36999999998666699999999997 9999999764


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                        ...+++...++.+++++.+...+.   ..++..+++++.++++..  ++ ++|+++++.+|++.+++++.. |+|++
T Consensus       263 --~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         263 --EPVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             --CCCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence              334566666778899999876332   356788888888886653  35 689999999999999988875 98874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=7.2e-37  Score=280.61  Aligned_cols=272  Identities=22%  Similarity=0.233  Sum_probs=211.4

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|.+  +|++||||++.+..+|+ |..|  ...++|....+   +|...+|            
T Consensus        56 ~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G------------  115 (341)
T cd08237          56 KKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG------------  115 (341)
T ss_pred             CCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC------------
Confidence            368999999999999998864  79999999988877777 4455  45678875543   3333344            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCCEEEEEccCHHHHHHHHHHHH-c
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-C  175 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VLI~G~G~iG~~a~~la~~-~  175 (339)
                             +|+||+++|++.++++|+++++++|+++. +++++|+++..  .+.++++++|||+|+|++|++++|+++. .
T Consensus       116 -------~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~  187 (341)
T cd08237         116 -------FMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIY  187 (341)
T ss_pred             -------ceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhc
Confidence                   99999999999999999999999887665 88999997654  2456889999999999999999999986 6


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCC---HHHHHHHHHHhhcCCcEE
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~  251 (339)
                      |..+|+++++++++++++++.++...++       ++       ... ++|+|||++|+   +..++.++++++++ |++
T Consensus       188 g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~i  252 (341)
T cd08237         188 PESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTI  252 (341)
T ss_pred             CCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEE
Confidence            6558999999999999998766543221       11       123 69999999994   45689999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC---CCCCcccceeeechh---hHHHHHHHH
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFE---EINSAFDLL  325 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g---~l~~~~~i~~~~~l~---~~~~A~~~~  325 (339)
                      +.+|...  ....+++..++.|++++.++....   .++++++++++.++   +..+.++++++|+++   ++.+|++..
T Consensus       253 v~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~  327 (341)
T cd08237         253 GLMGVSE--YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESD  327 (341)
T ss_pred             EEEeecC--CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHH
Confidence            9999753  234566677788899999875432   35789999999998   346778899999986   455555555


Q ss_pred             hcCceeEEEEEeC
Q 019535          326 IKGKCLRCVIWMG  338 (339)
Q Consensus       326 ~~~~~~kvvl~~~  338 (339)
                      .++...|+||+++
T Consensus       328 ~~~~~gKvvi~~~  340 (341)
T cd08237         328 LTNSWGKTVMEWE  340 (341)
T ss_pred             hhcCcceEEEEee
Confidence            4443459999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.4e-36  Score=281.30  Aligned_cols=279  Identities=19%  Similarity=0.207  Sum_probs=223.8

Q ss_pred             CCCcccCCceeEEEEEecCCCC-CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|+++|||++|+|+++|++|+ +|++||||++.+...|+.|..|..              +|+..+|            
T Consensus        61 ~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G------------  114 (410)
T cd08238          61 KEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG------------  114 (410)
T ss_pred             CCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC------------
Confidence            4799999999999999999998 699999999988888998887721              2222334            


Q ss_pred             ecccccccccceEEeecc----ceEEcCCCCCccccccccchhh---hhhHHH--------HHhcCCCCCCEEEEEcc-C
Q 019535           99 HHFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVS---TGVGAA--------WRTANVEVGSTVVIFGL-G  162 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l~~~~~---ta~~al--------~~~~~~~~~~~VLI~G~-G  162 (339)
                             +|+||++++++    .++++|+++++++++++. ++.   +++.++        .+.++++++++|+|+|+ |
T Consensus       115 -------~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G  186 (410)
T cd08238         115 -------GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAG  186 (410)
T ss_pred             -------cceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCC
Confidence                   99999999987    589999999999988652 221   233322        24567899999999975 9


Q ss_pred             HHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhc--------CCc-eEEeCCCCCCccHHHHHHHhcCC-CccEEEEc
Q 019535          163 SIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFEC  230 (339)
Q Consensus       163 ~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~--------ga~-~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~  230 (339)
                      ++|++++|+|+.+|  +.+|+++++++++++.++++        |++ .++++.+  ..++.+.+++++++ ++|++||+
T Consensus       187 ~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~  264 (410)
T cd08238         187 PMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVF  264 (410)
T ss_pred             HHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEc
Confidence            99999999999975  45799999999999999987        665 5676543  14678888888888 99999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCC-CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccc
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQP-GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV  309 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i  309 (339)
                      +|.+..++.++++++++ |+++.++.... .....+++..++.+++++.++..+.   +++++++++++.+|++++..++
T Consensus       265 ~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~i  340 (410)
T cd08238         265 VPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMV  340 (410)
T ss_pred             CCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcE
Confidence            99888899999999997 98887754321 1234566777888899999876432   3578999999999999998899


Q ss_pred             eeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535          310 THEMKFEEINSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       310 ~~~~~l~~~~~A~~~~~~~~~~kvvl~~~  338 (339)
                      +++|+|+++++|++.+..+...|+||.++
T Consensus       341 t~~~~l~~~~~A~~~~~~~~~gKvvl~~~  369 (410)
T cd08238         341 THIGGLNAAAETTLNLPGIPGGKKLIYTQ  369 (410)
T ss_pred             EEEecHHHHHHHHHHhhccCCceEEEECC
Confidence            99999999999999998333449999864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1e-35  Score=273.08  Aligned_cols=283  Identities=28%  Similarity=0.457  Sum_probs=242.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|+++|+++..|++||+|+..+...|+.|..|+.+.+++|....+   .|+..+|           
T Consensus        54 ~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-----------  119 (340)
T cd05284          54 PYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-----------  119 (340)
T ss_pred             cCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-----------
Confidence            44678999999999999999999999999999998888999999999999999998775   5554445           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                              +|++|+.++++.++++|+++++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+|
T Consensus       120 --------~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g  191 (340)
T cd05284         120 --------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALT  191 (340)
T ss_pred             --------cceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhC
Confidence                    999999999999999999999999999999999999987765 46788999999999889999999999999


Q ss_pred             -CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          177 -ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       177 -~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                       . +|+++++++++.+.++++|+++++++++   . +.+++.+++.+ ++|+++|++|+....+.++++++++ |+++.+
T Consensus       192 ~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~  265 (340)
T cd05284         192 PA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIV  265 (340)
T ss_pred             CC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEE
Confidence             6 8999998999999999999999998877   5 77888888877 8999999999866689999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      |....   ..++....+.+++++.+....   ..+.+..+++++.++.+.+   ..+.|+++++++|++.++++... |+
T Consensus       266 g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkv  336 (340)
T cd05284         266 GYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRA  336 (340)
T ss_pred             cCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceE
Confidence            86532   333444445678888876533   2456888999999998764   23789999999999999988766 88


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      ++.+
T Consensus       337 v~~~  340 (340)
T cd05284         337 VLVP  340 (340)
T ss_pred             EecC
Confidence            8753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.1e-35  Score=273.44  Aligned_cols=311  Identities=43%  Similarity=0.721  Sum_probs=248.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.|++||+|+..+..+|++|.+|+++..+.|...... -.|...++.-++. ..|...
T Consensus        51 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~  128 (363)
T cd08279          51 APLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFT-ADGEPV  128 (363)
T ss_pred             CCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCccccc-ccCccc
Confidence            35678999999999999999999999999999999999999999999999999754210 0000000000000 000000


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      ...++.|+|++|+.++++.++++|+++++++++.+++++.|||.++.+..++.++++|||+|+|.+|++++++|+..|++
T Consensus       129 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~  208 (363)
T cd08279         129 GAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGAS  208 (363)
T ss_pred             cccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            01123459999999999999999999999999999999999999888888999999999998899999999999999995


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++++++++.+.++++|++++++.+.   .++...+.+++.+ ++|++||++++...+..++++++++ |+++.+|..
T Consensus       209 ~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~  284 (363)
T cd08279         209 RIIAVDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMG  284 (363)
T ss_pred             cEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecC
Confidence            5999999999999999999999998877   6788888888766 8999999999776689999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      .......+....+..++..+.++.++....++.++++++++.++.+.+..++.++|+++++.+|++.+.+++..|.||
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         285 PPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             CCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            422344566666666677777776554444567889999999998876555678999999999999998887766554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.6e-35  Score=272.44  Aligned_cols=287  Identities=30%  Similarity=0.438  Sum_probs=244.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ++|.++|||++|+|+++|++++++++||+|+..+...|+.|.+|..+.++.|....+.  .|...+|             
T Consensus        53 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------  117 (345)
T cd08286          53 TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG-------------  117 (345)
T ss_pred             CCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC-------------
Confidence            4588999999999999999999999999999998889999999999999999866542  2323334             


Q ss_pred             cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535          100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                            +|++|+.++.+  .++++|++++..+++.++++++|||.++....++.++++|||.|+|++|.+++|+|+.+|+
T Consensus       118 ------~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~  191 (345)
T cd08286         118 ------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSP  191 (345)
T ss_pred             ------eeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                  99999999987  8999999999999999999999999977778889999999999889999999999999994


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+|+++++++++.+.++++|++.++++++   .++.+.+.+++.+ ++|++|||++....++.++++++++ |+++.+|.
T Consensus       192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~  267 (345)
T cd08286         192 SKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGV  267 (345)
T ss_pred             CeEEEEcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecc
Confidence            38999988888999999999999999877   6777888888777 8999999999877789999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC---ceeEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---KCLRC  333 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~---~~~kv  333 (339)
                      ..  ....+++..++.+++++.+....    .+.+..++++++++.+.+.++++++|+++++++|++.+.+.   ...|+
T Consensus       268 ~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~  341 (345)
T cd08286         268 HG--KPVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKV  341 (345)
T ss_pred             cC--CCCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEE
Confidence            53  23455666667788888765322    14578889999999887766677999999999999999876   34599


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      +|++
T Consensus       342 ~~~~  345 (345)
T cd08286         342 IIDF  345 (345)
T ss_pred             EEeC
Confidence            9975

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.2e-35  Score=275.23  Aligned_cols=303  Identities=28%  Similarity=0.400  Sum_probs=241.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCcccccccCC
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRG   95 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~   95 (339)
                      ++|.++|||++|+|+++|++++++++||+|+..+..+||.|++|+.+.+++|++....- .   +|....|  .+    |
T Consensus        53 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~  126 (386)
T cd08283          53 KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG--IF----G  126 (386)
T ss_pred             CCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc--cc----c
Confidence            56899999999999999999999999999999888899999999999999998654210 0   0000000  00    0


Q ss_pred             ceeecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535           96 ETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR  173 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~  173 (339)
                      .+-......|+|++|++++++  .++++|+++++++++.++++++|||+++ +.+++.++++|||+|+|.+|.+++++|+
T Consensus       127 ~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~  205 (386)
T cd08283         127 YSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAK  205 (386)
T ss_pred             cccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHH
Confidence            000000013599999999988  8999999999999999999999999987 7788999999999988999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCc-cHHHHHHHhcCC-CccEEEEcCCCH-----------------
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA-----------------  234 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-~~~~~l~~~~~g-~~d~v~d~~g~~-----------------  234 (339)
                      ..|+++|+++++++++.+.+++++...++++..   . ++.+.+.+++.+ ++|++||++|+.                 
T Consensus       206 ~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~  282 (386)
T cd08283         206 LLGAERVIAIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLE  282 (386)
T ss_pred             HcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccc
Confidence            999856999999999999999984446777665   4 478888888877 899999999752                 


Q ss_pred             ----HHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccce
Q 019535          235 ----SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT  310 (339)
Q Consensus       235 ----~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~  310 (339)
                          ..++.++++++++ |+++.+|..... ...++...++.+++++.+....   ..+.+.++++++.++++.+..+++
T Consensus       283 ~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~  357 (386)
T cd08283         283 TDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIIT  357 (386)
T ss_pred             cCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceE
Confidence                3588999999997 999999875432 3344554567788888876422   245688899999999887766677


Q ss_pred             eeechhhHHHHHHHHhcCc-e-eEEEEEe
Q 019535          311 HEMKFEEINSAFDLLIKGK-C-LRCVIWM  337 (339)
Q Consensus       311 ~~~~l~~~~~A~~~~~~~~-~-~kvvl~~  337 (339)
                      ++|+++++.+|++.+.++. . .|++|++
T Consensus       358 ~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         358 HRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             EEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            8999999999999998876 3 4999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.9e-35  Score=272.82  Aligned_cols=289  Identities=23%  Similarity=0.357  Sum_probs=236.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|+.|..+++++|.....   .|+..+|            
T Consensus        85 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g------------  149 (384)
T cd08265          85 TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG------------  149 (384)
T ss_pred             cCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC------------
Confidence            4578999999999999999999999999999999999999999999999999986553   4443344            


Q ss_pred             ecccccccccceEEeeccceEEcCCCC-------CccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAE  170 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~  170 (339)
                             +|++|+.++++.++++|+++       +.+ +++++.++++||+++... .+++++++|||+|+|++|+++++
T Consensus       150 -------~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~  221 (384)
T cd08265         150 -------AFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA  221 (384)
T ss_pred             -------cceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH
Confidence                   99999999999999999864       444 555666899999987665 68999999999988999999999


Q ss_pred             HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcCC
Q 019535          171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGW  248 (339)
Q Consensus       171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~  248 (339)
                      +|+.+|+.+|+++++++++.+.++++|+++++++++....++.+.+.+++.+ ++|+++|++|++ ..+..++++++++ 
T Consensus       222 lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-  300 (384)
T cd08265         222 LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-  300 (384)
T ss_pred             HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-
Confidence            9999998679999988889999999999999887751113678888888887 999999999973 4588999999997 


Q ss_pred             cEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          249 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       249 G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      |+++.+|....  ...+....+..+..++.+.....  ....+.++++++.++.+.+..+++++|+++++.+|++.+.++
T Consensus       301 G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~  376 (384)
T cd08265         301 GKIVYIGRAAT--TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER  376 (384)
T ss_pred             CEEEEECCCCC--CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence            99999986532  23444455556677777664211  234688999999999887655577899999999999997666


Q ss_pred             ceeEEEE
Q 019535          329 KCLRCVI  335 (339)
Q Consensus       329 ~~~kvvl  335 (339)
                      ...|+++
T Consensus       377 ~~~kvvv  383 (384)
T cd08265         377 TDGKITI  383 (384)
T ss_pred             CCceEEe
Confidence            5447775

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.8e-35  Score=269.26  Aligned_cols=284  Identities=27%  Similarity=0.426  Sum_probs=236.5

Q ss_pred             CCCcccCCceeEEEEEecCCCC--CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           20 VFPRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ++|.++|||++|+|+++|++|+  +|++||+|+..+..+|+.|..|+.+..+.|....   .+|+...            
T Consensus        61 ~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~------------  125 (350)
T cd08256          61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQNN------------  125 (350)
T ss_pred             CCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeeccC------------
Confidence            5788999999999999999999  8999999999999999999999999999997543   2444210            


Q ss_pred             eecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                           ..|+|++|+.++++ .++++|+++++++++.+ .++.|+|+++ +..++.++++|||.|+|.+|++++++|+++|
T Consensus       126 -----~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G  198 (350)
T cd08256         126 -----VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN  198 (350)
T ss_pred             -----CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                 12499999999988 67899999999999988 7999999986 7788999999999778999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ++.++++++++++.+.++++|++++++.+.   .++.+++.+++++ ++|++||++|+...+..++++++++ |+++.+|
T Consensus       199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g  274 (350)
T cd08256         199 PKKLIVLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFS  274 (350)
T ss_pred             CcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence            867888888899999999999998988776   6788888888877 8999999999765688999999997 9999998


Q ss_pred             cCCCCCcccccHHHH-hhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          256 VDQPGSQLSLSSFEV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      .....  ..+....+ ..+++++.++....    ..+.++++++.++.+.+..++.++|+++++.+|++.++++... |+
T Consensus       275 ~~~~~--~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kv  348 (350)
T cd08256         275 VFGDP--VTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKV  348 (350)
T ss_pred             cCCCC--CccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEE
Confidence            65322  22333333 24567777664332    3688899999999887655567999999999999999887755 77


Q ss_pred             EE
Q 019535          334 VI  335 (339)
Q Consensus       334 vl  335 (339)
                      ++
T Consensus       349 v~  350 (350)
T cd08256         349 VL  350 (350)
T ss_pred             eC
Confidence            64

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.3e-35  Score=269.08  Aligned_cols=290  Identities=30%  Similarity=0.439  Sum_probs=237.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++++++++||+|+..+..+||.|.+|..+..+.|+........+..               
T Consensus        52 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  116 (347)
T cd05278          52 AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR---------------  116 (347)
T ss_pred             CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC---------------
Confidence            46689999999999999999999999999999989999999999999999999764421001111               


Q ss_pred             ecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           99 HHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                          +.|+|++|++++++  +++++|+++++++++.+++++.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|
T Consensus       117 ----~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g  191 (347)
T cd05278         117 ----IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLG  191 (347)
T ss_pred             ----CCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                12499999999987  9999999999999999999999999986 6788999999999888999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..+++++++++++.+.++++|++.++++++   .++.+.+++++.+ ++|++||++++...+..++++++++ |+++.+|
T Consensus       192 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g  267 (347)
T cd05278         192 AARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVG  267 (347)
T ss_pred             CCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEc
Confidence            657888888888889999999999998887   6788888888776 9999999999865689999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce-e-EE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-L-RC  333 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kv  333 (339)
                      ........... ...+.+++++.+....   ..+.++++++++.++.+.+..++...|+++++++|++.+..+.. . |+
T Consensus       268 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  343 (347)
T cd05278         268 VYGKPDPLPLL-GEWFGKNLTFKTGLVP---VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKV  343 (347)
T ss_pred             CCCCCcccCcc-chhhhceeEEEeeccC---chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEE
Confidence            65322111111 1223557776665322   24578889999999988765556688999999999999887765 4 88


Q ss_pred             EEE
Q 019535          334 VIW  336 (339)
Q Consensus       334 vl~  336 (339)
                      +++
T Consensus       344 vv~  346 (347)
T cd05278         344 VIR  346 (347)
T ss_pred             Eec
Confidence            875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=266.39  Aligned_cols=282  Identities=29%  Similarity=0.489  Sum_probs=236.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|+|++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+.+++|.+..+   .+. ...             
T Consensus        53 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------  116 (343)
T cd05285          53 KEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRF---AATPPVD-------------  116 (343)
T ss_pred             CCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccc---cccccCC-------------
Confidence            468899999999999999999999999999988899999999999999999986542   111 112             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                            |+|++|++++++.++++|+++++++++.+ .++.+|++++ +.++++++++|||.|+|.+|++++|+|+.+|++
T Consensus       117 ------g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~  188 (343)
T cd05285         117 ------GTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGAT  188 (343)
T ss_pred             ------CceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                  39999999999999999999999999877 4889999975 788999999999998899999999999999994


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccH---HHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSV---SQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~---~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .|+++.+++++.++++++|++.++++++   .++   .+.+.+.+.+ ++|++|||+|+...++..+++++++ |+++.+
T Consensus       189 ~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~  264 (343)
T cd05285         189 KVVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLV  264 (343)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEE
Confidence            4899988899999999999999998876   443   7778887777 8999999999875689999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc--eeE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLR  332 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~--~~k  332 (339)
                      |....  ...+++..+..+++++.+....    .+.+..+++++.++.+.+.+.+.++|+++++.+|++.+.++.  ..|
T Consensus       265 g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k  338 (343)
T cd05285         265 GMGKP--EVTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIK  338 (343)
T ss_pred             ccCCC--CCccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeE
Confidence            86432  2344455566677887765422    256888999999998765555678999999999999998875  359


Q ss_pred             EEE
Q 019535          333 CVI  335 (339)
Q Consensus       333 vvl  335 (339)
                      ++|
T Consensus       339 ~~~  341 (343)
T cd05285         339 VVI  341 (343)
T ss_pred             EEE
Confidence            987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=8.6e-35  Score=272.13  Aligned_cols=284  Identities=19%  Similarity=0.246  Sum_probs=235.0

Q ss_pred             cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535           23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  102 (339)
Q Consensus        23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  102 (339)
                      .++|||++|+|+++|++++.+++||+|+..+...|+.|..|+.+..++|....+   +|+...                 
T Consensus        83 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~-----------------  142 (393)
T cd08246          83 HIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN-----------------  142 (393)
T ss_pred             cccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC-----------------
Confidence            589999999999999999999999999999999999999999999999986654   554311                 


Q ss_pred             ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh--cCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                       .|+|++|+.++...++++|+++++++++.+++++.|||+++...  ++++++++|+|+|+ |++|++++++|+.+|+ +
T Consensus       143 -~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~  220 (393)
T cd08246         143 -YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N  220 (393)
T ss_pred             -CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence             13999999999999999999999999999999999999987654  67889999999997 9999999999999999 7


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCC-------------------CccHHHHHHHhcCC--CccEEEEcCCCHHHHH
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQ  238 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-------------------~~~~~~~l~~~~~g--~~d~v~d~~g~~~~~~  238 (339)
                      ++++++++++.+.++++|+++++++++..                   ...+.+.+.+++++  ++|++|||+|+.. ++
T Consensus       221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~  299 (393)
T cd08246         221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FP  299 (393)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HH
Confidence            88888899999999999999999875410                   01245677777765  7999999999855 88


Q ss_pred             HHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          239 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       239 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      .++++++++ |+++.+|.... ....++...+..++.++.++....   .+.+.+++++++++.+.+  .++++|+++++
T Consensus       300 ~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~  372 (393)
T cd08246         300 TSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDET  372 (393)
T ss_pred             HHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHH
Confidence            999999997 99999986532 223445556667788887765433   246888999999997763  36789999999


Q ss_pred             HHHHHHHhcC-cee-EEEEE
Q 019535          319 NSAFDLLIKG-KCL-RCVIW  336 (339)
Q Consensus       319 ~~A~~~~~~~-~~~-kvvl~  336 (339)
                      ++|++.+.++ ... |+++-
T Consensus       373 ~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         373 PDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HHHHHHHHhCccccceEEEe
Confidence            9999999887 555 77763

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-34  Score=268.39  Aligned_cols=310  Identities=30%  Similarity=0.471  Sum_probs=246.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCC---cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCcccccccCC
Q 019535           20 VFPRILGHEAIGVVESVGENVDG---VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRG   95 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~   95 (339)
                      .+|.++|||++|+|+++|+++++   |++||+|+..+..+|+.|.+|..+++++|+...++...+ -.++|....-+..+
T Consensus        52 ~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (367)
T cd08263          52 PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDG  131 (367)
T ss_pred             CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCC
Confidence            67889999999999999999988   999999999888899999999999999998765310000 01111000000000


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC  175 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~  175 (339)
                       +-++-...|++++|+.++.+.++++|+++++.+++.+++++.|||+++.+...+.++++|||+|+|.+|++++++|+.+
T Consensus       132 -~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~  210 (367)
T cd08263         132 -GPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAF  210 (367)
T ss_pred             -CccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHc
Confidence             0000012359999999999999999999999999999999999999888888888999999998899999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |++++++++.++++.+.++++|++.+++.+.   .++.+++.+.+++ ++|++||++++....+.++++++++ |+++.+
T Consensus       211 G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~  286 (367)
T cd08263         211 GASPIIAVDVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVV  286 (367)
T ss_pred             CCCeEEEEeCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEE
Confidence            9944999988999999999999999999877   6788888888776 9999999999874589999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      +.........++...++.+++++.++....  .++.++++++++.++.+.+..++++.++++++.+|++.++++... |+
T Consensus       287 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~  364 (367)
T cd08263         287 GLAPGGATAEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRA  364 (367)
T ss_pred             ccCCCCCccccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCcccee
Confidence            865332234455566656788877753211  135688899999999887655567899999999999999888765 88


Q ss_pred             EEE
Q 019535          334 VIW  336 (339)
Q Consensus       334 vl~  336 (339)
                      ||.
T Consensus       365 ~~~  367 (367)
T cd08263         365 IVE  367 (367)
T ss_pred             eeC
Confidence            863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-34  Score=263.57  Aligned_cols=288  Identities=27%  Similarity=0.401  Sum_probs=241.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|+|++|.|+++|++++.|++||+|+..+..+|++|.+|..+..++|.+..+   .|+..+|             
T Consensus        53 ~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  116 (345)
T cd08260          53 TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------  116 (345)
T ss_pred             CCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------
Confidence            568899999999999999999999999999887778999999999999999987642   3333333             


Q ss_pred             cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535          100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                            +|++|+++++.  +++++|+++++++++.+++++.|||+++.+..++.++++|+|+|+|.+|++++++|+..|+
T Consensus       117 ------~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~  190 (345)
T cd08260         117 ------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA  190 (345)
T ss_pred             ------cceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                  99999999975  8999999999999999999999999988778889999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++.+++++.+.++++|++.+++.++  ..++.+.+.++..+++|++|||+|+.......+++++++ |+++.+|..
T Consensus       191 -~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~  266 (345)
T cd08260         191 -RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLT  266 (345)
T ss_pred             -eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCc
Confidence             8999999999999999999988888653  235667777776558999999999766688999999997 999999875


Q ss_pred             CCCCc-ccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          258 QPGSQ-LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ..... ..++...+..+++++.+....   ..+.++.+++++.++++.+..++.+.++++++++|++.++++... |+|+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~  343 (345)
T cd08260         267 LGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI  343 (345)
T ss_pred             CCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence            43221 345555566778888876532   245788899999999887655567899999999999999887766 7775


Q ss_pred             E
Q 019535          336 W  336 (339)
Q Consensus       336 ~  336 (339)
                      +
T Consensus       344 ~  344 (345)
T cd08260         344 T  344 (345)
T ss_pred             c
Confidence            3

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=6e-34  Score=263.82  Aligned_cols=286  Identities=27%  Similarity=0.455  Sum_probs=230.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|..|+.+.+++|+...+   ++...               
T Consensus        72 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~---------------  133 (364)
T PLN02702         72 KEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPP---------------  133 (364)
T ss_pred             CCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCC---------------
Confidence            368899999999999999999999999999999999999999999999999975332   22110               


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                         ..|+|++|+.++.+.++++|++++++++++.. ++.++++++ ...++.++++|||+|+|++|++++++|+.+|++.
T Consensus       134 ---~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~  208 (364)
T PLN02702        134 ---VHGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR  208 (364)
T ss_pred             ---CCCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence               02399999999999999999999999887632 455677765 7788999999999998999999999999999966


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh---cCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~---~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++++++++++.+.++++|++.++++.. ...++.+.+.++   .++++|++||++|++..+..++++++++ |+++.+|.
T Consensus       209 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~  286 (364)
T PLN02702        209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM  286 (364)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcc
Confidence            888888888999999999988776532 114566666554   2338999999999776799999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeech--hhHHHHHHHHhcCcee-EE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-kv  333 (339)
                      ...  ...+....+..+++++.+++..    ...+..++++++++++.+.++++++|++  +++++|++.+.++... |+
T Consensus       287 ~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kv  360 (364)
T PLN02702        287 GHN--EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV  360 (364)
T ss_pred             CCC--CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEE
Confidence            532  2334555667778888876432    2468889999999988766667788655  8999999998877655 98


Q ss_pred             EEE
Q 019535          334 VIW  336 (339)
Q Consensus       334 vl~  336 (339)
                      ++.
T Consensus       361 v~~  363 (364)
T PLN02702        361 MFN  363 (364)
T ss_pred             EEe
Confidence            885

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=6.2e-35  Score=264.13  Aligned_cols=251  Identities=18%  Similarity=0.207  Sum_probs=196.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|+++ +|++||||+..    |..|..|.               .|  .+              
T Consensus        57 ~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~---------------~~--~~--------------  100 (308)
T TIGR01202        57 GYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDV---------------RG--LF--------------  100 (308)
T ss_pred             CCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccc---------------cc--cC--------------
Confidence            679999999999999999998 69999999863    22333321               11  11              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                           |+|+||++++++.++++|++++++. ++++ ++.|||+++.. . ..+++++||+|+|++|++++|+|+++|++.
T Consensus       101 -----G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~  171 (308)
T TIGR01202       101 -----GGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSP  171 (308)
T ss_pred             -----CcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence                 3999999999999999999999864 5555 57899997754 3 336889999999999999999999999955


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      |++++.++++++.++.+   .++|+.+   .         .+.++|++|||+|+...++.++++++++ |+++.+|....
T Consensus       172 v~~~~~~~~rl~~a~~~---~~i~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~  235 (308)
T TIGR01202       172 PAVWETNPRRRDGATGY---EVLDPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE  235 (308)
T ss_pred             EEEeCCCHHHHHhhhhc---cccChhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC
Confidence            77777777776655543   4454432   1         1238999999999987789999999997 99999997532


Q ss_pred             CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce-eEEEEE
Q 019535          260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW  336 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~  336 (339)
                        ...+++..++.|++++.++...   .+++++++++++.+|++++.++++++|+|+++++||+.+.++.. .|++|+
T Consensus       236 --~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       236 --PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             --CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence              3455556677788888876432   24579999999999999988889999999999999998776554 499874

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.1e-34  Score=262.94  Aligned_cols=285  Identities=26%  Similarity=0.362  Sum_probs=238.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+..+...|+.|.+|.++.+++|....+   .|....             
T Consensus        64 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------  127 (350)
T cd08240          64 VKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------  127 (350)
T ss_pred             CCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------
Confidence            3567899999999999999999999999999999999999999999999999976532   232222             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                            |++++|+.++.+.++++|+++++.+++.+.+++.|||+++.+...+.++++|||+|+|++|++++|+|+.+|++
T Consensus       128 ------g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~  201 (350)
T cd08240         128 ------GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPA  201 (350)
T ss_pred             ------CcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence                  39999999999999999999999999999999999999887766667899999998899999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++.+.++++|++.+++.++   .++.+.+.+..++++|++||++|.+..+..++++|+++ |+++.+|...
T Consensus       202 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~  277 (350)
T cd08240         202 NIIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFG  277 (350)
T ss_pred             eEEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCC
Confidence            7889988999999999999988888776   66777777776558999999999766799999999997 9999998754


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      ...  ..+......++.++.+.....   .+++.+++++++++.+.+.  ....|+++++++|++.+.++... |++++
T Consensus       278 ~~~--~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         278 GEA--TLPLPLLPLRALTIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             CCC--cccHHHHhhcCcEEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            322  233333445788887765433   2568889999999977643  45789999999999999887765 88875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-33  Score=259.33  Aligned_cols=283  Identities=30%  Similarity=0.538  Sum_probs=236.7

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|+.++.|+|.....   .++...              
T Consensus        52 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------  114 (337)
T cd08261          52 SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRD--------------  114 (337)
T ss_pred             CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCC--------------
Confidence            458899999999999999999999999999988888999999999999999953321   222212              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                           |+|++|+.++++ ++++|+++++++++++ ..+.++++++ +..++.++++|||+|+|.+|.+++|+|+.+|+ +
T Consensus       115 -----g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~  185 (337)
T cd08261         115 -----GGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-R  185 (337)
T ss_pred             -----CcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-e
Confidence                 399999999999 9999999999999877 4788888866 77889999999999889999999999999999 8


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++.+++++.++++++|+++++++.+   .++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|...
T Consensus       186 v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~  261 (337)
T cd08261         186 VIVVDIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK  261 (337)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC
Confidence            999988999999999999999999887   6788888888877 8999999998876689999999997 9999998653


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc-ee-EEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-CL-RCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-kvvl~  336 (339)
                        ....++...+..+++++.+..   ....+.++.+++++.++.+.+.+.+..+++++++.+|++.+.+++ .. |+|++
T Consensus       262 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~  336 (337)
T cd08261         262 --GPVTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE  336 (337)
T ss_pred             --CCCccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence              223444455666778777653   223456888999999998876334668999999999999998873 54 99986


Q ss_pred             e
Q 019535          337 M  337 (339)
Q Consensus       337 ~  337 (339)
                      +
T Consensus       337 ~  337 (337)
T cd08261         337 F  337 (337)
T ss_pred             C
Confidence            4

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=8.7e-34  Score=259.89  Aligned_cols=284  Identities=31%  Similarity=0.482  Sum_probs=242.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +.++|.++|+|++|+|+++|++++.+++||+|+..+..+|+.|.+|+.++.++|....+   .|+..+|           
T Consensus        53 ~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-----------  118 (338)
T cd08254          53 LTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-----------  118 (338)
T ss_pred             cCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-----------
Confidence            34568899999999999999999999999999999999999999999999999966543   4444444           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|++|+.++.+.++++|+++++++++.++.++.|||+++.....+.++++|||.|+|.+|++++++|+..|+
T Consensus       119 --------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~  190 (338)
T cd08254         119 --------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA  190 (338)
T ss_pred             --------cceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence                    999999999999999999999999999999999999988888889999999999889999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++++++..+   ....+.+ +...+ ++|+++||++.....+.++++++++ |+++.+|.
T Consensus       191 -~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~  264 (338)
T cd08254         191 -AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGL  264 (338)
T ss_pred             -EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECC
Confidence             8999999999999999999988888776   5666666 55555 9999999999877799999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ..  ....++...+..++.++.++...   ..+.+..++++++++.+.+.   .+.++++++.++++.+.++... |+++
T Consensus       265 ~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~  336 (338)
T cd08254         265 GR--DKLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVL  336 (338)
T ss_pred             CC--CCCccCHHHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEE
Confidence            53  22345556677788888876432   24568889999999987754   4789999999999999888766 9888


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      ++
T Consensus       337 ~~  338 (338)
T cd08254         337 VP  338 (338)
T ss_pred             eC
Confidence            64

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=8.2e-34  Score=260.90  Aligned_cols=289  Identities=28%  Similarity=0.401  Sum_probs=237.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..++.+.|++...   +|...-              
T Consensus        52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------  114 (344)
T cd08284          52 TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS--------------  114 (344)
T ss_pred             CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc--------------
Confidence            457899999999999999999999999999988889999999999999999987543   221100              


Q ss_pred             cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535          100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                       ....|+|++|+.++++  .++++|+++++++++.++++++|||+++.. .++.++++|||+|+|.+|++++++|+.+|+
T Consensus       115 -~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~  192 (344)
T cd08284         115 -PNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGA  192 (344)
T ss_pred             -CCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence             0012499999999865  999999999999999999999999998754 788899999999889999999999999997


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+|+++++++++.+.++++|+. +++.+.   .++...+.+++.+ ++|++||++++...+..++++++++ |+++.+|.
T Consensus       193 ~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~  267 (344)
T cd08284         193 ARVFAVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGV  267 (344)
T ss_pred             ceEEEEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECc
Confidence            5789998888899999999975 466665   5778888888876 9999999999877799999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW  336 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~  336 (339)
                      ... ..........+.+++++.+..   ....+.+..+++++.++.+.+..+++++++++++.+|++.+.++...|+|+.
T Consensus       268 ~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         268 HTA-EEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             CCC-CCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            542 223344455566788876542   2235678999999999988765556789999999999998877655788874

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=8.8e-34  Score=260.84  Aligned_cols=286  Identities=28%  Similarity=0.419  Sum_probs=236.5

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+..+.|....+   .|...+|             
T Consensus        52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  115 (345)
T cd08287          52 RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------  115 (345)
T ss_pred             CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------
Confidence            348899999999999999999999999999876677899999999999999986543   3433444             


Q ss_pred             cccccccccceEEeecc--ceEEcCCCCCccccc-----cccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA  172 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa-----~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la  172 (339)
                            +|++|+.++.+  .++++|++++++.+.     .+.+.+.||++++ ..+++.++++|+|.|+|++|++++|+|
T Consensus       116 ------~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~la  188 (345)
T cd08287         116 ------GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAA  188 (345)
T ss_pred             ------ceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence                  99999999975  999999999983222     1225788899876 467889999999998899999999999


Q ss_pred             HHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       173 ~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      +..|++.++++++++++.+.++++|++.++++..   .++.+.+.+.+.+ ++|+++|++|++..++.++++++++ |++
T Consensus       189 k~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~  264 (345)
T cd08287         189 KRLGAERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRV  264 (345)
T ss_pred             HHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEE
Confidence            9999966889988888889999999999999887   6788888888877 9999999999877799999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      +.+|....  ...+++...+.+++++.+....   ..+.+.++++++.++.+.+..+++++++++++++|++.+.+....
T Consensus       265 v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~  339 (345)
T cd08287         265 GYVGVPHG--GVELDVRELFFRNVGLAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI  339 (345)
T ss_pred             EEecccCC--CCccCHHHHHhcceEEEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce
Confidence            99986542  3345554556778888775322   235688999999999887765567999999999999998877667


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |++|++
T Consensus       340 k~~~~~  345 (345)
T cd08287         340 KVLLRP  345 (345)
T ss_pred             EEEeCC
Confidence            999863

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=263.51  Aligned_cols=260  Identities=20%  Similarity=0.268  Sum_probs=214.9

Q ss_pred             CCCcccCC--ceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           20 VFPRILGH--EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        20 ~~P~i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..|.++|+  |++|+|..+|+++++|++||+|+..                                             
T Consensus        71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------  105 (348)
T PLN03154         71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI---------------------------------------------  105 (348)
T ss_pred             CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence            46899998  8899999999999999999999421                                             


Q ss_pred             eecccccccccceEEeeccc--eEE--cCCCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHH
Q 019535           98 IHHFVSVSSFSEYTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG  171 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~l  171 (339)
                             |+|+||++++...  +.+  +|++++++ +++.+++++.|||+++.+..+++++++|||+|+ |++|++++|+
T Consensus       106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql  178 (348)
T PLN03154        106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL  178 (348)
T ss_pred             -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence                   2899999998753  544  59999986 688899999999999888889999999999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      |+.+|+ +|+++++++++.++++ ++|+++++++++  ..++.+.+++.+++++|++|||+|+.. ++.++++++++ |+
T Consensus       179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~  253 (348)
T PLN03154        179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GR  253 (348)
T ss_pred             HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CE
Confidence            999999 8999999999999987 799999999864  136777888877568999999999865 89999999997 99


Q ss_pred             EEEeccCCCCCc----ccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535          251 TIVLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL  324 (339)
Q Consensus       251 ~v~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~  324 (339)
                      ++.+|.......    ..++...++.+++++.++....+.  ..+.+.++++++.+|++++.  ++.+|+|+++++|++.
T Consensus       254 iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~  331 (348)
T PLN03154        254 IAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVG  331 (348)
T ss_pred             EEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHH
Confidence            999997532211    012455677789999887644321  12357789999999988653  6678999999999999


Q ss_pred             HhcCcee-EEEEEeC
Q 019535          325 LIKGKCL-RCVIWMG  338 (339)
Q Consensus       325 ~~~~~~~-kvvl~~~  338 (339)
                      +++++.. |+||++.
T Consensus       332 l~~g~~~GKvVl~~~  346 (348)
T PLN03154        332 LFSGKNVGKQVIRVA  346 (348)
T ss_pred             HHcCCCCceEEEEec
Confidence            9998876 9999875

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=8.7e-34  Score=260.65  Aligned_cols=285  Identities=28%  Similarity=0.427  Sum_probs=239.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|+|++|+|+++|++++.|++||+|+..++..|+.|+.|..++.++|....+   .|....|             
T Consensus        52 ~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  115 (343)
T cd08235          52 KPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------  115 (343)
T ss_pred             CCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------
Confidence            458899999999999999999999999999999999999999999999999976543   3333333             


Q ss_pred             cccccccccceEEeeccc-----eEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAH-----VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL  174 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~  174 (339)
                            +|++|+.++++.     ++++|+++++++++.+ +++.+||+++. ..++.++++|||+|+|.+|++++|+|+.
T Consensus       116 ------~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~  187 (343)
T cd08235         116 ------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKA  187 (343)
T ss_pred             ------cceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence                  999999999998     9999999999998876 68899999774 4589999999999889999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .|.+.|+++++++++.+.++++|.++++++++   .++.+.+.+.+.+ ++|++|||+++.......+++++++ |+++.
T Consensus       188 ~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~  263 (343)
T cd08235         188 SGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILF  263 (343)
T ss_pred             cCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence            99933899988999999998899999998887   7888888888877 8999999999876689999999997 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      ++.........++...+..+++.+.++...   ..+.++.+++++.++.+.+...+..+|+++++.+|++.+.++. . |
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k  339 (343)
T cd08235         264 FGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLK  339 (343)
T ss_pred             EeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEE
Confidence            986543333444555566677877765432   2356888999999998865444668899999999999998888 6 8


Q ss_pred             EEEE
Q 019535          333 CVIW  336 (339)
Q Consensus       333 vvl~  336 (339)
                      +|+.
T Consensus       340 ~vi~  343 (343)
T cd08235         340 IVIT  343 (343)
T ss_pred             EEeC
Confidence            8863

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.2e-33  Score=259.47  Aligned_cols=285  Identities=24%  Similarity=0.381  Sum_probs=233.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..+.+++|....+   .++..+|             
T Consensus        56 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  119 (341)
T PRK05396         56 PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------  119 (341)
T ss_pred             CCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------
Confidence            578899999999999999999999999999988889999999999999999976432   3333334             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                            +|++|+.++.+.++++|+++++++++.+ .++.++++++..  ...++++|+|.|+|++|++++|+|+.+|+++
T Consensus       120 ------~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~  190 (341)
T PRK05396        120 ------AFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH  190 (341)
T ss_pred             ------cceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence                  9999999999999999999999888755 466667665432  3458999999988999999999999999966


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.++++++|+++++++++   .++.+.+.+++.+ ++|++|||.|+...++.++++++++ |+++.+|...
T Consensus       191 v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  266 (341)
T PRK05396        191 VVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPP  266 (341)
T ss_pred             EEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence            888888889999999999999998877   6788888888876 9999999999877789999999997 9999998754


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~  338 (339)
                      .  ...++...+..++.++.++...  ...+.+..+++++.++ +.+.+++.++++++++.+|++.+.++...|++++++
T Consensus       267 ~--~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        267 G--DMAIDWNKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             C--CCcccHHHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            2  2333456666778888776422  1234566788888888 545455779999999999999988776449998764

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.4e-33  Score=260.70  Aligned_cols=294  Identities=24%  Similarity=0.320  Sum_probs=234.5

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCcccccccCCc
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~   96 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|..|+.+++++|.......   .+|+..     ..     
T Consensus        52 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----  121 (375)
T cd08282          52 EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD-----MG-----  121 (375)
T ss_pred             CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc-----cC-----
Confidence            46899999999999999999999999999999899999999999999999997532100   011100     00     


Q ss_pred             eeecccccccccceEEeecc--ceEEcCCCCCcc---ccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG  171 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~l  171 (339)
                           ...|+|+||+.++.+  .++++|++++++   .++.++++++|||+++ ..+++.++++|||.|+|++|++++|+
T Consensus       122 -----~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~  195 (375)
T cd08282         122 -----PYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYS  195 (375)
T ss_pred             -----CCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHH
Confidence                 001399999999976  899999999998   5677888999999987 77889999999999889999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH-----------HHHHH
Q 019535          172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEA  240 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~-----------~~~~~  240 (339)
                      |+++|+++|+++++++++.+.++++|+ ..+++++   .++.+.+.+++.+++|++|||+|...           .+..+
T Consensus       196 a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~  271 (375)
T cd08282         196 AILRGASRVYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQL  271 (375)
T ss_pred             HHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHH
Confidence            999997678889989999999999998 4566666   67788888876668999999998762           48899


Q ss_pred             HHHhhcCCcEEEEeccCCCCC-----------cccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccc
Q 019535          241 YACCRKGWGKTIVLGVDQPGS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV  309 (339)
Q Consensus       241 ~~~l~~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i  309 (339)
                      +++++++ |+++.+|......           ...+++..+..++..+.+...   ..++.+.++++++.++++.+..++
T Consensus       272 ~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~  347 (375)
T cd08282         272 IRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVV  347 (375)
T ss_pred             HHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcE
Confidence            9999997 9999887643111           123455556666776665432   124568889999999988765557


Q ss_pred             eeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          310 THEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       310 ~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      +++|+++++++|++.+.++...|+|+.+
T Consensus       348 ~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         348 SHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             EEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence            8999999999999999888833998753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.5e-33  Score=264.05  Aligned_cols=284  Identities=21%  Similarity=0.236  Sum_probs=234.7

Q ss_pred             ccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCceeeccc
Q 019535           24 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFV  102 (339)
Q Consensus        24 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~  102 (339)
                      ++|||++|+|+++|++++.+++||+|+..+...|++|++|+.+++++|.....   .|+. .+                 
T Consensus        80 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~-----------------  139 (398)
T TIGR01751        80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF-----------------  139 (398)
T ss_pred             ecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC-----------------
Confidence            89999999999999999999999999999999999999999999999965432   3322 22                 


Q ss_pred             ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                        |+|+||+.++...++++|+++++++++.+.+++.|||+++..  ..++.++++|+|+|+ |++|++++++|+.+|+ +
T Consensus       140 --g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~  216 (398)
T TIGR01751       140 --GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N  216 (398)
T ss_pred             --ccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence              399999999999999999999999999999999999998755  467889999999997 9999999999999999 7


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCC-------------------CccHHHHHHHhcCC-CccEEEEcCCCHHHHHH
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQE  239 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-------------------~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~  239 (339)
                      ++++++++++.+.++++|++.++|+++..                   ...+.+.+.+++.+ ++|++|||+|... +..
T Consensus       217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~  295 (398)
T TIGR01751       217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPT  295 (398)
T ss_pred             EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHH
Confidence            88888888999999999999999865410                   01244567777776 8999999999755 889


Q ss_pred             HHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHH
Q 019535          240 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN  319 (339)
Q Consensus       240 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~  319 (339)
                      ++++++++ |+++.+|.... ....++...+..++.++.++....   ..++++++++++++.+..  .+++++++++++
T Consensus       296 ~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~  368 (398)
T TIGR01751       296 SVFVCRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIG  368 (398)
T ss_pred             HHHhhccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHH
Confidence            99999997 99999987532 223445555666677777765433   245788999999997763  367999999999


Q ss_pred             HHHHHHhcCcee-EEEEEeC
Q 019535          320 SAFDLLIKGKCL-RCVIWMG  338 (339)
Q Consensus       320 ~A~~~~~~~~~~-kvvl~~~  338 (339)
                      ++++.+.++... |+|+.+.
T Consensus       369 ~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       369 QAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             HHHHHHHcCCCCceEEEEeC
Confidence            999999888765 9988764

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-33  Score=255.30  Aligned_cols=269  Identities=24%  Similarity=0.371  Sum_probs=224.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~   98 (339)
                      ++|.++|||++|+|+++|++   +++||+|...+..+|+.|.+|..+.+++|.....   .++ ..+|            
T Consensus        49 ~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------  110 (319)
T cd08242          49 PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG------------  110 (319)
T ss_pred             CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC------------
Confidence            36889999999999999988   6899999999999999999999999999976542   333 1233            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|++|++++.+.++++|++++.++++.+ .++.+++. +.+..+++++++|||+|+|.+|++++|+|+.+|+ 
T Consensus       111 -------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-  180 (319)
T cd08242         111 -------AFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-  180 (319)
T ss_pred             -------ceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence                   9999999999999999999999888864 35566666 5577889999999999989999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|++++.++++.++++++|++.++++++   .         +.+ ++|++|||+|+...++.++++++++ |+++..+..
T Consensus       181 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~  247 (319)
T cd08242         181 DVVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTY  247 (319)
T ss_pred             eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccc
Confidence            7999999999999999999988776644   1         234 8999999999876689999999997 999987654


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .  ....++...+..++.++.+...+      .++++++++.++++++.++++++|+++++++|++.++++...|++|++
T Consensus       248 ~--~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~  319 (319)
T cd08242         248 A--GPASFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP  319 (319)
T ss_pred             C--CCCccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence            3  23445566677788888876532      378899999999887666678999999999999999877656998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3e-33  Score=256.74  Aligned_cols=285  Identities=26%  Similarity=0.402  Sum_probs=229.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++|+.|++||+|+..+..+|++|.+|..|+.+.|....+   ++...    +++        
T Consensus        52 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~----~~~--------  116 (339)
T cd08232          52 REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAM----RFP--------  116 (339)
T ss_pred             cCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccc---eeecc----ccC--------
Confidence            568899999999999999999999999999999889999999999999999986542   22110    000        


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                        ...|+|++|++++.+.++++|+++++++|+. ..+++|+|+++.+...+ ++++|||.|+|.+|++++|+|+.+|+++
T Consensus       117 --~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~  192 (339)
T cd08232         117 --HVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAE  192 (339)
T ss_pred             --CCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence              0123999999999999999999999999876 56888999987665555 8999999988999999999999999867


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc-CC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~-~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+++++++++.+.++++|+++++++++   .++    .++. .+ ++|++||++++...++..+++|+++ |+++.+|..
T Consensus       193 v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~  264 (339)
T cd08232         193 IVATDLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGML  264 (339)
T ss_pred             EEEECCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecC
Confidence            899988888888889999989988765   332    2222 23 6999999999766689999999997 999999864


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      .  .....++..++.+++++.+...    ..+.++++++++.++.+.+...+.++|+++++++|++.+.++... |+|++
T Consensus       265 ~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  338 (339)
T cd08232         265 G--GPVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS  338 (339)
T ss_pred             C--CCccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEe
Confidence            3  2233344445667788776642    234688899999999887666677899999999999999877655 99886


Q ss_pred             e
Q 019535          337 M  337 (339)
Q Consensus       337 ~  337 (339)
                      +
T Consensus       339 ~  339 (339)
T cd08232         339 F  339 (339)
T ss_pred             C
Confidence            4

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.5e-33  Score=258.57  Aligned_cols=285  Identities=23%  Similarity=0.376  Sum_probs=232.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEe-eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      .++|.++|||++|+|+++|++++.|++||+|+ .....+|++|.+|..+.+++|...... +.|+...+           
T Consensus        51 ~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------  118 (337)
T cd05283          51 TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKYPDG-----------  118 (337)
T ss_pred             CCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhc-ccccccCC-----------
Confidence            45799999999999999999999999999997 445568999999999999999875431 11111001           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                         ....|+|+||+.++.+.++++|+++++++++.+.+.+.|||+++.. .++.++++++|.|+|.+|++++++|+.+|+
T Consensus       119 ---~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~  194 (337)
T cd05283         119 ---TITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA  194 (337)
T ss_pred             ---CcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence               1112499999999999999999999999999999999999997644 568999999998889999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+.+++++++.++++++|++.+++.+.   .+...   . ..+++|++|||++.....+.++++++++ |+++.+|..
T Consensus       195 -~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~  265 (337)
T cd05283         195 -EVTAFSRSPSKKEDALKLGADEFIATKD---PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAP  265 (337)
T ss_pred             -eEEEEcCCHHHHHHHHHcCCcEEecCcc---hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEecc
Confidence             8999999999999999999988887665   33322   1 2348999999999876588999999997 999999875


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      ..  ...+++..++.++.++.+.....   .++++.+++++.++++.+  .+ ++|+++++++||+.++++... |+|++
T Consensus       266 ~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         266 EE--PLPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             CC--CCccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            32  22456666677899999876543   357888999999997754  34 789999999999999988876 88874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=4.1e-33  Score=255.93  Aligned_cols=285  Identities=25%  Similarity=0.437  Sum_probs=234.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ++|.++|||++|+|+++|++++.|++||+|+..++..|+.|..|..+..++|...++   +|+...              
T Consensus        54 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------  116 (340)
T TIGR00692        54 KPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD--------------  116 (340)
T ss_pred             CCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcce---EeecCC--------------
Confidence            468899999999999999999999999999998999999999999999999987653   333223              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                           |+|++|++++++.++++|++++.+++ +++.++.+|++++  .....++++|+|.|+|.+|.+++|+|+.+|.+.
T Consensus       117 -----g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~  188 (340)
T TIGR00692       117 -----GCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP  188 (340)
T ss_pred             -----CcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                 39999999999999999999998655 4667889998865  345678999999888999999999999999944


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++.+++++.+.++++|++.++++..   .++.+.+.+++++ ++|++|||+++...+...+++++++ |+++.+|...
T Consensus       189 v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~  264 (340)
T TIGR00692       189 VIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPP  264 (340)
T ss_pred             EEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCC
Confidence            888888888999999999988888876   6788888888776 9999999999877789999999997 9999998753


Q ss_pred             CCCcccccHH-HHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      ..  ..++.. .+..+++++.+...  ....+.+.++++++.++++.+.+++.+.++++++.++++.+.++...|+|+.+
T Consensus       265 ~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       265 GK--VTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             CC--cccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            22  222233 45566777766541  12234578899999999887655577999999999999999877655888864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.4e-33  Score=255.80  Aligned_cols=258  Identities=16%  Similarity=0.181  Sum_probs=212.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCC-cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|+++++ |++||+|+..+.                             .+            
T Consensus        58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-----------------------------~~------------   96 (324)
T cd08291          58 KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-----------------------------SY------------   96 (324)
T ss_pred             CCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-----------------------------CC------------
Confidence            457899999999999999999996 999999975321                             01            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-c-cCHHHHHHHHHHHHc
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLC  175 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~-G-~G~iG~~a~~la~~~  175 (339)
                             |+|+||+.++++.++++|+++++++++.+++.+.|||. +.+.... .+++++|+ | +|++|++++|+|+.+
T Consensus        97 -------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~  167 (324)
T cd08291          97 -------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKAD  167 (324)
T ss_pred             -------CcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence                   38999999999999999999999999988888999975 4555555 56667776 4 599999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++++++++.++++++|+++++++++   .++.+.+++++.+ ++|++||++|+.. ....+++++++ |+++.+
T Consensus       168 G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~  241 (324)
T cd08291         168 GI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVY  241 (324)
T ss_pred             CC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEE
Confidence            99 8999999999999999999999999887   7888999998887 9999999999887 67789999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      |.........++...++.+++++.++....+..   .+++.++++++. +.+  +++++++|+++++.+|++.+.++...
T Consensus       242 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~  318 (324)
T cd08291         242 GYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMST  318 (324)
T ss_pred             EecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCC
Confidence            875332222245556677899998887544321   235777888887 644  45688999999999999999887665


Q ss_pred             -EEEE
Q 019535          332 -RCVI  335 (339)
Q Consensus       332 -kvvl  335 (339)
                       |++|
T Consensus       319 Gkvv~  323 (324)
T cd08291         319 GKKLL  323 (324)
T ss_pred             CeEEe
Confidence             9886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=6.6e-33  Score=254.31  Aligned_cols=282  Identities=27%  Similarity=0.424  Sum_probs=232.4

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .|.++|||++|+|+++|++++.|++||+|+..+ ..+|+.|..|..+..++|.....   .|+..+|             
T Consensus        53 ~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  116 (338)
T PRK09422         53 TGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------  116 (338)
T ss_pred             CCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------
Confidence            478999999999999999999999999998655 45899999999999999976653   4444444             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~  178 (339)
                            +|+||+.++.+.++++|+++++++++.+++++.|||+++ +.++++++++|||+|+|++|++++++|+.. |+ 
T Consensus       117 ------~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-  188 (338)
T PRK09422        117 ------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-  188 (338)
T ss_pred             ------cceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-
Confidence                  999999999999999999999999999999999999986 778899999999999999999999999984 99 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++++++.+.++++|++.+++++.  ..++.+.+++.++ ++|++|.+.++...++.++++++.+ |+++.+|...
T Consensus       189 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~  264 (338)
T PRK09422        189 KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP  264 (338)
T ss_pred             eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC
Confidence            8999999999999999999988888743  1356667777665 6886655555566699999999997 9999998653


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~  337 (339)
                        ....++...+..+..++.++....   .++++.+++++.++.+..  .+ ..++++++++|++.+.++... |+++.+
T Consensus       265 --~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        265 --ESMDLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             --CCceecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence              233445555666778887654322   356888999999997753  35 468999999999999888766 998876


Q ss_pred             C
Q 019535          338 G  338 (339)
Q Consensus       338 ~  338 (339)
                      .
T Consensus       337 ~  337 (338)
T PRK09422        337 T  337 (338)
T ss_pred             C
Confidence            4

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=256.31  Aligned_cols=281  Identities=28%  Similarity=0.426  Sum_probs=231.7

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..++|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..+.+++|.....   +|...+|           
T Consensus        51 ~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-----------  116 (334)
T PRK13771         51 RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-----------  116 (334)
T ss_pred             CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-----------
Confidence            34678899999999999999999889999999988888999999999999999987653   4433334           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                              +|++|+.++.+.++++|+++++.+++.+++++.+||+++... ++.++++|||+|+ |.+|++++++|+..|
T Consensus       117 --------~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g  187 (334)
T PRK13771        117 --------FFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALG  187 (334)
T ss_pred             --------eeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcC
Confidence                    999999999999999999999999999999999999987665 8899999999987 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|+++++++++.+.++++ ++++++.+     ++.+.++++  +++|++|||+|+.. ...++++++++ |+++.+|.
T Consensus       188 ~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~  256 (334)
T PRK13771        188 A-KVIAVTSSESKAKIVSKY-ADYVIVGS-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGN  256 (334)
T ss_pred             C-EEEEEeCCHHHHHHHHHH-HHHhcCch-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEec
Confidence            9 899999899999998888 66666543     344555554  37999999999876 88999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ......+.......+.+++++.+...   ..+++++++++++.++.+..  .+++.|+++++++|++.++++... |+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  331 (334)
T PRK13771        257 VDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILV  331 (334)
T ss_pred             cCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEE
Confidence            54322222334344567888887632   23467889999999997753  467899999999999999887665 9888


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      ++
T Consensus       332 ~~  333 (334)
T PRK13771        332 KP  333 (334)
T ss_pred             ec
Confidence            75

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.2e-33  Score=253.72  Aligned_cols=284  Identities=22%  Similarity=0.344  Sum_probs=239.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++.|++||+|+..+..+|+.|.+|..+.+++|....+   .|+...|             
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------  119 (342)
T cd08266          56 PLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------  119 (342)
T ss_pred             CCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccc---cccccCc-------------
Confidence            568899999999999999999999999999999999999999999999999987653   4443333             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                            ++++|+.++.+.++++|+++++++++.+++++.+|++++.+..++.++++++|+|+ +.+|++++++++..|+ 
T Consensus       120 ------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-  192 (342)
T cd08266         120 ------GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-  192 (342)
T ss_pred             ------ceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence                  89999999999999999999999999999999999998888888999999999987 6999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+.+++++++.+.++.++...+++..+   .+..+.+.+.+.+ ++|++++++|... ++.++++++++ |+++.++..
T Consensus       193 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~  267 (342)
T cd08266         193 TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGAT  267 (342)
T ss_pred             EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecC
Confidence            8999999988888888888877777665   6677777777766 8999999999866 88999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      ... ....+....+.+++++.+.....   ...+.++++++.++.+.+  ++++.|+++++++|++.+.++... |++++
T Consensus       268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         268 TGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             CCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            432 23344445566788887765332   346788899999987653  467899999999999999877665 88876


Q ss_pred             e
Q 019535          337 M  337 (339)
Q Consensus       337 ~  337 (339)
                      +
T Consensus       342 ~  342 (342)
T cd08266         342 P  342 (342)
T ss_pred             C
Confidence            3

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.5e-33  Score=236.48  Aligned_cols=275  Identities=23%  Similarity=0.305  Sum_probs=223.9

Q ss_pred             CCCCcCC-----CCCcccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCC
Q 019535            5 KPSNKTA-----GKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS   79 (339)
Q Consensus         5 ~~~~~~~-----g~~~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~   79 (339)
                      -|-||.+     |. |+.++.+|.|-|+|++|+|++||+++++|++||+|+....                         
T Consensus        57 aPINPsDIN~IQGv-YpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a-------------------------  110 (354)
T KOG0025|consen   57 APINPSDINQIQGV-YPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA-------------------------  110 (354)
T ss_pred             cCCChHHhhhhccc-cCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC-------------------------
Confidence            3566665     76 7789999999999999999999999999999999976432                         


Q ss_pred             CCCCCCCcccccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           80 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        80 ~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                                             +.|+|++|.+.+++.+++++..++++.||.+.++-+|||.+|.+..++.+|++|+-.
T Consensus       111 -----------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQN  167 (354)
T KOG0025|consen  111 -----------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQN  167 (354)
T ss_pred             -----------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeec
Confidence                                   134999999999999999999999999999999999999999999999999988777


Q ss_pred             cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCC
Q 019535          160 GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL  233 (339)
Q Consensus       160 G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~  233 (339)
                      |+ +.+|++.+|+|+++|. +.+.++|+....+.+    +.+||++|+..+++...   +..+..... .+.+.|||+|+
T Consensus       168 ganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~---~~~k~~~~~~~prLalNcVGG  243 (354)
T KOG0025|consen  168 GANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR---KMKKFKGDNPRPRLALNCVGG  243 (354)
T ss_pred             CcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch---hhhhhhccCCCceEEEeccCc
Confidence            87 8999999999999999 888888887665555    56899999976652211   112222233 88999999999


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCC--------cHHHHHHHHhCCCCCC
Q 019535          234 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS--------DIPILLKRYMDKELEL  305 (339)
Q Consensus       234 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~l~~g~l~~  305 (339)
                      .+ ..+..+.|.++ |+++.||.+ ..++..++...+++|++.++|+++..|....        .+.++.+++..|++..
T Consensus       244 ks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~  320 (354)
T KOG0025|consen  244 KS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKA  320 (354)
T ss_pred             hh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecc
Confidence            99 77888999998 999999986 4678888999999999999999988776322        3567889999998865


Q ss_pred             cccceeeechhhHHHHHHHHhcCce--eEEEEEe
Q 019535          306 DKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWM  337 (339)
Q Consensus       306 ~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~  337 (339)
                      +.  ....+|++-..|++...+.-.  .|-++.+
T Consensus       321 ~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  321 PN--CEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             cc--ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            53  367788888888886554432  2555554

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-32  Score=252.86  Aligned_cols=274  Identities=22%  Similarity=0.314  Sum_probs=219.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCC-cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|+|++|+|+++|++++. |++||+|+..+...|+.|++|..++.+             ...             
T Consensus        62 ~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~~~-------------  115 (341)
T cd08262          62 GADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------EAP-------------  115 (341)
T ss_pred             CCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------CCC-------------
Confidence            46889999999999999999987 999999999999999999999321110             012             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                            |+|+||++++.+.++++|+++++++++ +++++++||++ ....+++++++|||+|+|.+|.+++|+|+.+|++
T Consensus       116 ------g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~  187 (341)
T cd08262         116 ------GGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG  187 (341)
T ss_pred             ------CceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                  389999999999999999999999887 56689999997 5778899999999998899999999999999996


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHH---HHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~---~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .+++++.++++.+.++++|++++++++.   .+..+   .+.+.+.+ ++|++||++|+...+..++++++++ |+++.+
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~  263 (341)
T cd08262         188 PIVASDFSPERRALALAMGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVV  263 (341)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEE
Confidence            6888888899999999999988998765   32221   34445555 8999999999865588999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      |......  .+.......++.++.+....   ..+++.++++++.++.+.+.++++++|+++++++|++.+.++... |+
T Consensus       264 g~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kv  338 (341)
T cd08262         264 GVCMESD--NIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKI  338 (341)
T ss_pred             CCCCCCC--ccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEE
Confidence            8653222  12222224456776654321   234688899999999888766667999999999999999888765 88


Q ss_pred             EEE
Q 019535          334 VIW  336 (339)
Q Consensus       334 vl~  336 (339)
                      |++
T Consensus       339 vv~  341 (341)
T cd08262         339 LVD  341 (341)
T ss_pred             EeC
Confidence            863

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.8e-32  Score=251.78  Aligned_cols=283  Identities=29%  Similarity=0.453  Sum_probs=241.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+ ...|+.|.+|..++.++|.+..+   .|+...|            
T Consensus        55 ~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------  119 (341)
T cd08297          55 KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG------------  119 (341)
T ss_pred             CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC------------
Confidence            4577899999999999999999999999998765 46899999999999999988754   5554444            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                             ++++|+.++.+.++++|+++++++++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+
T Consensus       120 -------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~  191 (341)
T cd08297         120 -------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL  191 (341)
T ss_pred             -------cceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence                   89999999999999999999999999999999999998655 58899999999987 6799999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++.+++++.+.++++|++.++++++   .++.+.+.+++++ ++|++||+.++...+..++++++.+ |+++.+|.
T Consensus       192 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~  266 (341)
T cd08297         192 -RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGL  266 (341)
T ss_pred             -eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecC
Confidence             8999999999999999999999998877   6788888888876 9999999888777799999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      .. .....++...+..++.++.+.....   .++++.+++++.++.+.+  .+ +.|++++++++++.+.++... |+++
T Consensus       267 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  339 (341)
T cd08297         267 PP-GGFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVV  339 (341)
T ss_pred             CC-CCCCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEE
Confidence            53 2333556666667888888754321   357888999999998754  34 679999999999999887766 9988


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      ++
T Consensus       340 ~~  341 (341)
T cd08297         340 DF  341 (341)
T ss_pred             eC
Confidence            75

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.2e-32  Score=253.02  Aligned_cols=284  Identities=27%  Similarity=0.429  Sum_probs=229.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.+++|...++   .|....              
T Consensus        56 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------  118 (341)
T cd05281          56 KPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTD--------------  118 (341)
T ss_pred             CCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCC--------------
Confidence            467899999999999999999999999999988888999999999999999965432   332222              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                           |+|++|++++.+.++++|++++++.+ +++.++.++++++.  ....++++|||.|+|.+|++++|+|+.+|..+
T Consensus       119 -----g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~  190 (341)
T cd05281         119 -----GCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL  190 (341)
T ss_pred             -----CcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                 38999999999999999999998555 55567888888654  34578999999988999999999999999856


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.+.++++|++++++.+.   .++. .+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|...
T Consensus       191 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  265 (341)
T cd05281         191 VIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP  265 (341)
T ss_pred             EEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence            888888888999999999988888766   5677 78888877 9999999999877789999999997 9999998653


Q ss_pred             CCCcccccHH-HHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .  ...+++. ....++..+.+...  ....+.+.++++++.++.+.+..++.++++++++++|++.+.++...|+++++
T Consensus       266 ~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~  341 (341)
T cd05281         266 G--PVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP  341 (341)
T ss_pred             C--CcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence            2  2222222 24556777776542  12235678899999999887666677889999999999999888833998863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.8e-32  Score=251.99  Aligned_cols=287  Identities=27%  Similarity=0.473  Sum_probs=235.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|+|++|+|+++|++++.|++||+|+..+...|+.|.+|..++++.|+....   +|....              
T Consensus        51 ~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------  113 (343)
T cd08236          51 HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRD--------------  113 (343)
T ss_pred             CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccC--------------
Confidence            467899999999999999999999999999998888999999999999999976532   333223              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                           |+|++|+.++++.++++|+++++++++++ .+++|||+++. ...+.++++|||+|+|.+|.+++|+|+.+|++.
T Consensus       114 -----g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~  186 (343)
T cd08236         114 -----GAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKR  186 (343)
T ss_pred             -----CcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence                 39999999999999999999999999887 58899999874 778999999999988999999999999999944


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.+.++++|+..++++++   .. .+++.+...+ ++|++|||+|....+..++++++++ |+++.+|...
T Consensus       187 v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  261 (343)
T cd08236         187 VIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPY  261 (343)
T ss_pred             EEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccC
Confidence            999998899999999999989998876   55 7777777777 8999999998876689999999997 9999998654


Q ss_pred             CCCcc-cccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc-Ccee-EE
Q 019535          259 PGSQL-SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL-RC  333 (339)
Q Consensus       259 ~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~-~~~~-kv  333 (339)
                      ....+ ......++.++.++.++......  .++.++++++++.++.+.+.+++.+++++++++++++.+++ +... |+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  341 (343)
T cd08236         262 GDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKV  341 (343)
T ss_pred             CCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEE
Confidence            22111 22334455778888877653221  14567889999999987644446689999999999999988 5444 77


Q ss_pred             EE
Q 019535          334 VI  335 (339)
Q Consensus       334 vl  335 (339)
                      |+
T Consensus       342 v~  343 (343)
T cd08236         342 LL  343 (343)
T ss_pred             eC
Confidence            64

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.6e-32  Score=252.88  Aligned_cols=274  Identities=23%  Similarity=0.306  Sum_probs=222.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|+++|+++++|++||+|+..+.+.|+.|..|..     |.   +   +|...+|           
T Consensus        74 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~~~g-----------  131 (350)
T cd08274          74 TLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSERDG-----------  131 (350)
T ss_pred             CCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCCCCc-----------
Confidence            346899999999999999999999999999999988888888876531     21   0   2222223           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                              +|++|+.++.+.++++|+++++++++.+++++.|||+++ +..+++++++|||+|+ |++|++++++|+.+|
T Consensus       132 --------~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g  202 (350)
T cd08274         132 --------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRG  202 (350)
T ss_pred             --------cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence                    999999999999999999999999999999999999976 7788999999999997 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + ++++++++. +.+.++++|++.+++...   ....+  ...+.+ ++|++||++|+.. ++.++++++.+ |+++.+|
T Consensus       203 ~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g  273 (350)
T cd08274         203 A-IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAG  273 (350)
T ss_pred             C-EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEec
Confidence            9 788888655 788888999876665444   33333  455555 9999999999865 89999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      ... .....++...++.+++++.++....   .+.+.++++++.++++.+  +++++|+++++.+|++.+.++... |++
T Consensus       274 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  347 (350)
T cd08274         274 AIA-GPVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLV  347 (350)
T ss_pred             ccC-CccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEE
Confidence            652 2224566666677888988876432   356888999999997653  366899999999999999877665 888


Q ss_pred             EEe
Q 019535          335 IWM  337 (339)
Q Consensus       335 l~~  337 (339)
                      +.+
T Consensus       348 i~~  350 (350)
T cd08274         348 LVP  350 (350)
T ss_pred             EeC
Confidence            763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=4.2e-32  Score=248.54  Aligned_cols=281  Identities=28%  Similarity=0.481  Sum_probs=232.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|+|++|+|+++|++++.+++||+|+..+...|+.|++|..++.++|.+...   .|...+|             
T Consensus        51 ~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------  114 (334)
T cd08234          51 APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------  114 (334)
T ss_pred             CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------
Confidence            378899999999999999999999999999998888999999999999999977642   3333334             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                            +|++|+.++.+.++++|+++++.+++.+ +++.++++++ +.+++.++++|||+|+|.+|.+++++|+..|+++
T Consensus       115 ------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~  186 (334)
T cd08234         115 ------GFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASR  186 (334)
T ss_pred             ------cceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                  9999999999999999999999998876 6888999877 7789999999999988999999999999999944


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.+.++++|++.+++..+   .+....  +.+.+ ++|++|||++.......++++++++ |+++.+|...
T Consensus       187 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~  260 (334)
T cd08234         187 VTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYA  260 (334)
T ss_pred             EEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCC
Confidence            888998999999999999888888766   454444  34444 8999999998777789999999997 9999998754


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ......+....++.+++++.+....    .+.+++++++++++++.+...++++++++++++|++.+.+ ... |+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         261 PDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             CCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            3233445555555567887776432    2458889999999988765556789999999999999988 444 8776

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.6e-32  Score=251.10  Aligned_cols=261  Identities=20%  Similarity=0.223  Sum_probs=204.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++|++|++||+|+...                                             
T Consensus        66 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------  100 (345)
T cd08293          66 APWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN---------------------------------------------  100 (345)
T ss_pred             CCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC---------------------------------------------
Confidence            35789999999999999999999999999996310                                             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccc----cccccchhhhhhHHHHHhcCCCCC--CEEEEEcc-CHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEG  171 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~al~~~~~~~~~--~~VLI~G~-G~iG~~a~~l  171 (339)
                            +.|+||++++++.++++|+++++.+    ++.+++++.|||+++.+.++++++  ++|||+|+ |++|++++|+
T Consensus       101 ------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiql  174 (345)
T cd08293         101 ------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQI  174 (345)
T ss_pred             ------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHH
Confidence                  1799999999999999999865443    445677899999988788888876  99999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      |+++|+++|+++++++++.+++++ +|+++++++.+   .++.+.+++++++++|++||++|+.. +..++++++++ |+
T Consensus       175 Ak~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~  249 (345)
T cd08293         175 GRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SH  249 (345)
T ss_pred             HHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CE
Confidence            999998569999999999999876 99999999887   78888888887669999999999987 79999999997 99


Q ss_pred             EEEeccCCCC-C--c--cccc--HHHH-hhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHH
Q 019535          251 TIVLGVDQPG-S--Q--LSLS--SFEV-LHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINS  320 (339)
Q Consensus       251 ~v~~g~~~~~-~--~--~~~~--~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~  320 (339)
                      ++.+|..... .  .  ..+.  ...+ ..+++++.++......  ..+.++++++++.++++.+.  +...++++++.+
T Consensus       250 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~  327 (345)
T cd08293         250 IILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGE  327 (345)
T ss_pred             EEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHH
Confidence            9999853211 0  0  1111  1111 2234444333221111  11236678889999988754  335579999999


Q ss_pred             HHHHHhcCcee-EEEEEe
Q 019535          321 AFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       321 A~~~~~~~~~~-kvvl~~  337 (339)
                      |++.+.+++.. |+|+++
T Consensus       328 A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         328 AFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHhcCCCCCeEEEEC
Confidence            99999888765 999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.5e-32  Score=250.72  Aligned_cols=255  Identities=21%  Similarity=0.257  Sum_probs=206.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|.|++|+|+++|+   .|++||+|+..                                               
T Consensus        56 ~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-----------------------------------------------   85 (325)
T TIGR02825        56 EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-----------------------------------------------   85 (325)
T ss_pred             CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----------------------------------------------
Confidence            4578999999999999874   69999999531                                               


Q ss_pred             cccccccccceEEeeccceEEc----CCCCCcccc-ccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~  173 (339)
                           ++|++|++++.+++.++    |++++++++ +++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+
T Consensus        86 -----~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk  160 (325)
T TIGR02825        86 -----PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK  160 (325)
T ss_pred             -----cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence                 16899999999988888    899999987 6788999999999888899999999999986 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      ..|+ +|+++++++++.++++++|+++++++++  ...+.+.++...++++|++||++|+.. ++.++++++++ |+++.
T Consensus       161 ~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~  235 (325)
T TIGR02825       161 LKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAI  235 (325)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEE
Confidence            9999 8999999999999999999999999876  124556666655448999999999876 79999999997 99999


Q ss_pred             eccCCCC---Cccc--ccHHHHhhcCCeEEeeecCCCC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHH
Q 019535          254 LGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLL  325 (339)
Q Consensus       254 ~g~~~~~---~~~~--~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~  325 (339)
                      +|.....   ....  .....+..+++++.++....+.   ..+.+.++++++.+|++.+.  +..+|+++++.+|++.+
T Consensus       236 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~  313 (325)
T TIGR02825       236 CGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGM  313 (325)
T ss_pred             ecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHH
Confidence            9864321   1111  1233456668888776543221   12357889999999988765  44678999999999999


Q ss_pred             hcCcee-EEEEE
Q 019535          326 IKGKCL-RCVIW  336 (339)
Q Consensus       326 ~~~~~~-kvvl~  336 (339)
                      ++++.. |+|++
T Consensus       314 ~~~~~~gkvVv~  325 (325)
T TIGR02825       314 LKGENLGKTIVK  325 (325)
T ss_pred             hcCCCCCeEEeC
Confidence            888766 88864

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-32  Score=248.23  Aligned_cols=268  Identities=26%  Similarity=0.354  Sum_probs=221.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.|++||+|+..+...|+.|..|..+.+++|....+   +|+...|             
T Consensus        53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------  116 (325)
T cd08264          53 PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------  116 (325)
T ss_pred             CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------
Confidence            468899999999999999999999999999988888999999999999999987543   4443334             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                            +|++|+.++++.++++|+++++++++.+++++.|||+++.. ++++++++|+|+|+ |++|++++++|+.+|+ 
T Consensus       117 ------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-  188 (325)
T cd08264         117 ------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-  188 (325)
T ss_pred             ------ceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence                  89999999999999999999999999999999999998654 88999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+++++    .+.++++|++++++.++     ..+.+++++ +++|+++|++|+.. +..++++++++ |+++.+|...
T Consensus       189 ~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~  256 (325)
T cd08264         189 EVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT  256 (325)
T ss_pred             eEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC
Confidence            7888763    36677899888887543     245566666 68999999999854 89999999997 9999998642


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                       .....++...+..++.++.+...+.   ++.+.++++++...  ++  .++++|+++++++|++.+.++...
T Consensus       257 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~--~~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         257 -GGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDL--KV--KVWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             -CCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcC--Cc--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence             2234566666777788887764332   35688888888543  32  356899999999999998876554

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=7.9e-32  Score=245.55  Aligned_cols=258  Identities=20%  Similarity=0.244  Sum_probs=217.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      +.+|.++|||++|+|+++|++++.+++||+|+..+.                              .             
T Consensus        56 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------------------------------~-------------   92 (324)
T cd08292          56 PELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV------------------------------H-------------   92 (324)
T ss_pred             CCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC------------------------------C-------------
Confidence            356899999999999999999999999999965321                              1             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|+.+++..++++|+++++++++.+++.+.|||+++ ..+++.++++|||+|+ |.+|++++|+|+.+|+
T Consensus        93 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~  165 (324)
T cd08292          93 ------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI  165 (324)
T ss_pred             ------CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence                  3899999999999999999999999999998899999976 5578999999999986 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +++++..++++.+.++++|++++++.++   .++.+.+.+++.+ ++|++|||+|+.. ...++++++++ |+++.+|.
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~  239 (324)
T cd08292         166 -NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGS  239 (324)
T ss_pred             -eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEec
Confidence             8899988888888888899989988877   7788889999888 9999999999876 78999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCC-------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK  329 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~  329 (339)
                      .. .....+++...+.++.++.++....+.       ..+.+.++++++.++.+.+.  +.++|+++++.+|++.+.++.
T Consensus       240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~  316 (324)
T cd08292         240 MS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPG  316 (324)
T ss_pred             CC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCC
Confidence            52 233455655566789999887654321       12357889999999988754  468899999999999988766


Q ss_pred             ee-EEEE
Q 019535          330 CL-RCVI  335 (339)
Q Consensus       330 ~~-kvvl  335 (339)
                      .. |+++
T Consensus       317 ~~~kvvv  323 (324)
T cd08292         317 RAGKVLL  323 (324)
T ss_pred             CCceEEe
Confidence            55 8776

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.1e-31  Score=245.27  Aligned_cols=278  Identities=26%  Similarity=0.426  Sum_probs=228.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|+++++|++||+|++.+. .+|++|++|+++.+++|++..+   +++...|           
T Consensus        51 ~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-----------  116 (330)
T cd08245          51 SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-----------  116 (330)
T ss_pred             CCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-----------
Confidence            357889999999999999999999999999987665 6899999999999999998653   4432233           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|++|+.++.+.++++|+++++++++.+++.+.|||+++.. .++.++++|||+|+|.+|++++++|+.+|+
T Consensus       117 --------~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~  187 (330)
T cd08245         117 --------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF  187 (330)
T ss_pred             --------ccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence                    89999999999999999999999999999999999998754 789999999999888899999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|++.+++...   ......    ..+++|++||+++.......++++++++ |+++.++..
T Consensus       188 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~  258 (330)
T cd08245         188 -ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLP  258 (330)
T ss_pred             -EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCC
Confidence             8999999999999999899888887655   333222    2237999999988777789999999997 999999864


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ... ........+..++.++.+...+.   ...++.+++++.++.+.+   ..+.++++++++|++.+.++... |+++
T Consensus       259 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         259 ESP-PFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CCC-ccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            322 22233445667788887775432   246788889999997764   23789999999999999887765 7664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-31  Score=243.83  Aligned_cols=279  Identities=31%  Similarity=0.480  Sum_probs=228.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ...|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+.+.+++|.+..   .+|....|            
T Consensus        52 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------  116 (332)
T cd08259          52 GKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG------------  116 (332)
T ss_pred             CCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC------------
Confidence            356789999999999999999999999999999888899999999999999998753   24443334            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                             +|++|++++...++++|+++++++++.+++++.|||+++.. ..+.+++++||+|+ |.+|++++++++..|.
T Consensus       117 -------~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~  188 (332)
T cd08259         117 -------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA  188 (332)
T ss_pred             -------eeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence                   99999999999999999999999999999999999998766 88999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|...+++..     ++.+.+.+..  ++|++|+++|... ...++++++++ |+++.++..
T Consensus       189 -~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~  258 (332)
T cd08259         189 -RVIAVTRSPEKLKILKELGADYVIDGS-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNV  258 (332)
T ss_pred             -eEEEEeCCHHHHHHHHHcCCcEEEecH-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCC
Confidence             899999888888888888887776532     2455555543  6999999999877 88999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      .... ..+.......++.++.++..   ....+++++++++.++.+.+  +++++|+++++++|++.+.++... |++++
T Consensus       259 ~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         259 TPDP-APLRPGLLILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CCCC-cCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            3221 11233333345777666531   22456788999999997653  467899999999999999888766 88763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.4e-31  Score=244.55  Aligned_cols=255  Identities=20%  Similarity=0.225  Sum_probs=207.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ++|.++|+|++|+|++   .++.|++||+|+..                                               
T Consensus        58 ~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~-----------------------------------------------   87 (329)
T cd08294          58 EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS-----------------------------------------------   87 (329)
T ss_pred             CCCcEecceEEEEEec---CCCCCCCCCEEEee-----------------------------------------------
Confidence            5789999999999995   44679999999531                                               


Q ss_pred             cccccccccceEEeecc---ceEEcCCCCC--c---cccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIA---HVVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAE  170 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~---~~~~lp~~~~--~---~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~  170 (339)
                           ++|++|++++.+   .++++|++++  +   ..+++++++++|||+++.+..+++++++|||+|+ |++|++++|
T Consensus        88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq  162 (329)
T cd08294          88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ  162 (329)
T ss_pred             -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence                 178999999999   9999999998  2   2234678899999999888899999999999985 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      +|+.+|+ +|+++++++++.++++++|+++++++++   .++.+.+++++++++|++||++|+.. ++.++++++++ |+
T Consensus       163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~  236 (329)
T cd08294         163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GR  236 (329)
T ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CE
Confidence            9999999 8999999999999999999999999887   78888888877668999999999865 89999999997 99


Q ss_pred             EEEeccCCCCC---c--ccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHH
Q 019535          251 TIVLGVDQPGS---Q--LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD  323 (339)
Q Consensus       251 ~v~~g~~~~~~---~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~  323 (339)
                      ++.+|......   .  .......+..+++++.++....+.  ..+.++++++++.++++.+.  ...+|+++++.+|++
T Consensus       237 iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~  314 (329)
T cd08294         237 VAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFI  314 (329)
T ss_pred             EEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHH
Confidence            99998532111   1  122234556678888876543321  12236678899999988765  335699999999999


Q ss_pred             HHhcCcee-EEEEEe
Q 019535          324 LLIKGKCL-RCVIWM  337 (339)
Q Consensus       324 ~~~~~~~~-kvvl~~  337 (339)
                      .+.++... |+++++
T Consensus       315 ~~~~~~~~gkvvv~~  329 (329)
T cd08294         315 GMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHcCCCCCeEEEeC
Confidence            99888766 998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.7e-31  Score=244.96  Aligned_cols=259  Identities=19%  Similarity=0.227  Sum_probs=208.9

Q ss_pred             CCCcccCCce--eEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           20 VFPRILGHEA--IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        20 ~~P~i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..|+++|+++  .|.+..+|+.+++|++||+|..                            +                 
T Consensus        66 ~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~----------------------------~-----------------  100 (338)
T cd08295          66 LPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG----------------------------F-----------------  100 (338)
T ss_pred             CCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe----------------------------c-----------------
Confidence            5688999865  4555568888889999999942                            1                 


Q ss_pred             eecccccccccceEEeec-cceEEcC-CCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535           98 IHHFVSVSSFSEYTVLDI-AHVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~  173 (339)
                             |+|+||+++++ +.++++| ++++++ +++.+++++.|||+++.+..+++++++|||+|+ |++|++++|+|+
T Consensus       101 -------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk  173 (338)
T cd08295         101 -------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK  173 (338)
T ss_pred             -------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence                   28999999999 7999995 678887 788899999999998888889999999999987 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+|+ +|+++++++++.+++++ +|+++++++.+  ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++
T Consensus       174 ~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv  248 (338)
T cd08295         174 LKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIA  248 (338)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEE
Confidence            9999 89999999999999988 99999998654  136777787776559999999999855 89999999997 9999


Q ss_pred             EeccCCCCCc----ccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535          253 VLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       253 ~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      .+|.......    ...+...+..+++++.++.......  .+.+.++++++.+|++++.  +...|+++++.+|++.++
T Consensus       249 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~  326 (338)
T cd08295         249 ACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLF  326 (338)
T ss_pred             EecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHh
Confidence            9986432111    1123455666788888765433221  2346788999999987754  446699999999999998


Q ss_pred             cCcee-EEEEEe
Q 019535          327 KGKCL-RCVIWM  337 (339)
Q Consensus       327 ~~~~~-kvvl~~  337 (339)
                      ++... |+|+++
T Consensus       327 ~~~~~GkvVl~~  338 (338)
T cd08295         327 TGSNIGKQVVKV  338 (338)
T ss_pred             cCCCCceEEEEC
Confidence            88766 999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.1e-31  Score=241.51  Aligned_cols=272  Identities=24%  Similarity=0.329  Sum_probs=223.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++++++++||+|+..+ ..+|+.|..|..+.+++|....+   +|+..+|           
T Consensus        56 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-----------  121 (329)
T cd08298          56 PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-----------  121 (329)
T ss_pred             CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-----------
Confidence            35688999999999999999999999999997654 36899999999999999987654   4544344           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|++|+.++.+.++++|+++++.+++.+++++.|||+++ +.++++++++|||+|+|++|++++++++..|.
T Consensus       122 --------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~  192 (329)
T cd08298         122 --------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA  192 (329)
T ss_pred             --------ceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence                    899999999999999999999999999999999999987 88999999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|++.+++.+.   .         ..+++|+++++.+....++.++++++++ |+++.+|..
T Consensus       193 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~  258 (329)
T cd08298         193 -EVFAFTRSGEHQELARELGADWAGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIH  258 (329)
T ss_pred             -eEEEEcCChHHHHHHHHhCCcEEeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCC
Confidence             8999999999999999999988777654   1         1237999999877767799999999997 999998853


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      . .....+++.. +.++..+.++...   ..+.+.+++++++++.+.+  . .++|+++++++|++.++++... |+++
T Consensus       259 ~-~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         259 M-SDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             C-CCCCccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            2 1112233333 3346666655322   2346788899999997764  2 4889999999999999887765 7663

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9e-31  Score=236.85  Aligned_cols=249  Identities=27%  Similarity=0.436  Sum_probs=211.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .+|.++|+|++|+|+++|++++.|++||+|+..+. .+|+.|++|..+.++.|.....   +|....|            
T Consensus        54 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------  118 (306)
T cd08258          54 ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG------------  118 (306)
T ss_pred             CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC------------
Confidence            46889999999999999999999999999987764 6899999999999999976432   3433334            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|++|++++.+.++++|+++++++++ ++.++.++|+++....++.++++|||.|+|.+|++++|+|+.+|+ 
T Consensus       119 -------~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-  189 (306)
T cd08258         119 -------GFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-  189 (306)
T ss_pred             -------ceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence                   99999999999999999999999887 666889999998888889999999998889999999999999999 


Q ss_pred             EEEEEc--CChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          179 RIIGVD--VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       179 ~Vi~~~--~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +|+++.  +++++.+.++++|++++ ++..   .++.+.+.+++.+ ++|++||++|+...+...+++++++ |+++.+|
T Consensus       190 ~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g  264 (306)
T cd08258         190 TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG  264 (306)
T ss_pred             EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence            787763  34557778888999877 7766   7888888888776 9999999998776689999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK  301 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g  301 (339)
                      ... .....++...++.+++++.|++++.   +++++++++++++|
T Consensus       265 ~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         265 IFG-PLAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG  306 (306)
T ss_pred             ccC-CCCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence            864 2345667777888999999998655   46799999998765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.98  E-value=4.8e-30  Score=233.77  Aligned_cols=263  Identities=19%  Similarity=0.227  Sum_probs=218.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|+++|++++.+++||+|+....                            ...            
T Consensus        56 ~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------------------------~~~------------   95 (324)
T cd08244          56 PPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG----------------------------RAG------------   95 (324)
T ss_pred             CCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC----------------------------CCC------------
Confidence            3466889999999999999999999999999975321                            011            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|++|+.++.+.++++|+++++++++.+++++.||| ++.+.++++++++|+|+|+ |.+|.+++++|+.+|
T Consensus        96 -------g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g  167 (324)
T cd08244          96 -------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAG  167 (324)
T ss_pred             -------ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC
Confidence                   3899999999999999999999999999999999995 4677888999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+++++++++.+.++++|++.+++..+   .++.+.+.+.+++ ++|+++|++|+.. .+.++++++.+ |+++.+|
T Consensus       168 ~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g  241 (324)
T cd08244         168 A-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYG  241 (324)
T ss_pred             C-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEe
Confidence            9 8999999999999999999988888877   6788888888877 8999999999887 78999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      ..... ...++...++.+++++.+........   .+.+.++++++.++.+..  ++++.|+++++++|++.+.++... 
T Consensus       242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~  318 (324)
T cd08244         242 WASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVG  318 (324)
T ss_pred             cCCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCc
Confidence            75432 23455455667888888775433211   234667888898887653  366899999999999999887766 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+++.+
T Consensus       319 kvv~~~  324 (324)
T cd08244         319 KVLLLP  324 (324)
T ss_pred             eEEEeC
Confidence            888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.97  E-value=5.4e-30  Score=233.32  Aligned_cols=260  Identities=20%  Similarity=0.260  Sum_probs=218.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+..+.                              .             
T Consensus        54 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------------------~-------------   90 (323)
T cd05282          54 PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG------------------------------E-------------   90 (323)
T ss_pred             CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC------------------------------C-------------
Confidence            356889999999999999999999999999975320                              1             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+ |.+|++++++|+.+|+
T Consensus        91 ------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~  164 (323)
T cd05282          91 ------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF  164 (323)
T ss_pred             ------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence                  389999999999999999999999999999999999998888888899999999987 8999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +++++.+++++.+.++++|++.++++.+   .++.+.+.+.+.+ ++|++|||+|+.. ....+++++++ |+++.+|.
T Consensus       165 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~  238 (323)
T cd05282         165 -KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGL  238 (323)
T ss_pred             -eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEcc
Confidence             8999998999999999999999998876   6788888888887 9999999999977 67889999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK  329 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~  329 (339)
                      .... ...++...+..++.++.+.....+..       .+.+.++++++.++++.+.  +++.|+++++++|++.+.++.
T Consensus       239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~  315 (323)
T cd05282         239 LSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPG  315 (323)
T ss_pred             CCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCC
Confidence            5432 34455555555789988876554321       1246778889989977643  568899999999999998876


Q ss_pred             ee-EEEEE
Q 019535          330 CL-RCVIW  336 (339)
Q Consensus       330 ~~-kvvl~  336 (339)
                      .. |++++
T Consensus       316 ~~~kvv~~  323 (323)
T cd05282         316 RGGKVLLT  323 (323)
T ss_pred             CCceEeeC
Confidence            65 88763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.3e-29  Score=230.28  Aligned_cols=278  Identities=23%  Similarity=0.332  Sum_probs=227.0

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|+++++|++||+|+...+..|+.+.+|      +|....   .+|...+|             
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~~---~~~~~~~g-------------  113 (336)
T cd08276          56 KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEAS---ALGGPIDG-------------  113 (336)
T ss_pred             CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccc------cccccc---ccccccCc-------------
Confidence            47889999999999999999999999999988776666554443      332211   13333333             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                            +|++|+.++.+.++++|+++++.+++.+++++.+||+++.+...++++++|+|+|+|++|+++++++++.|+ +
T Consensus       114 ------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~  186 (336)
T cd08276         114 ------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R  186 (336)
T ss_pred             ------eeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence                  899999999999999999999999999999999999988888889999999999889999999999999999 8


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++++++++.+.++++|++.+++...  ..++.+.+.+++.+ ++|++||+++... ...++++++++ |+++.+|...
T Consensus       187 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~  262 (336)
T cd08276         187 VIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLS  262 (336)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCC
Confidence            999999999999998899888887653  13577788888887 9999999998665 88999999997 9999998653


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      .. ........++.+++++.+...+.   .+.+.++++++.++.+.+.  .++.+++++++++++.+.++... |++++
T Consensus       263 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         263 GF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             CC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            22 22345566678899998876543   3568888999988866543  55889999999999999877665 88875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=232.38  Aligned_cols=263  Identities=22%  Similarity=0.289  Sum_probs=215.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+...                              .+             
T Consensus        56 ~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~------------------------------~~-------------   92 (334)
T PTZ00354         56 PGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL------------------------------PG-------------   92 (334)
T ss_pred             CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC-------------
Confidence            34567999999999999999999999999996421                              11             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|++++.+.++++|+++++.+++.+++++.|||+++.+...+.++++|||+|+ |++|++++++|+.+|+
T Consensus        93 ------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~  166 (334)
T PTZ00354         93 ------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA  166 (334)
T ss_pred             ------CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence                  289999999999999999999999999999999999998888788999999999986 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc-HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~-~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       +++.+.+++++.+.++++|++++++...   .+ +.+.+.+.+.+ ++|++||++++.. +..++++++++ |+++.++
T Consensus       167 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~  240 (334)
T PTZ00354        167 -ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYG  240 (334)
T ss_pred             -EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEe
Confidence             7777888999999999999988888765   44 77888888876 9999999998765 88999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCC--C-----CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA--K-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      ...+.....++...++.+..++.++.......  +     +.++++++++.++.+.+  ++.+.+++++++++++.+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~  318 (334)
T PTZ00354        241 FMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQN  318 (334)
T ss_pred             cCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhC
Confidence            65322211156666666677888775443211  0     12366788888887654  366889999999999999877


Q ss_pred             cee-EEEEEeC
Q 019535          329 KCL-RCVIWMG  338 (339)
Q Consensus       329 ~~~-kvvl~~~  338 (339)
                      ... |+++++.
T Consensus       319 ~~~~kvvv~~~  329 (334)
T PTZ00354        319 KNIGKVVLTVN  329 (334)
T ss_pred             CCCceEEEecC
Confidence            655 9998765

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.3e-29  Score=228.04  Aligned_cols=258  Identities=24%  Similarity=0.357  Sum_probs=210.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+...                                              
T Consensus        50 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------------------------   83 (312)
T cd08269          50 AEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS----------------------------------------------   83 (312)
T ss_pred             CCCcccceeeEEEEEEECCCCcCCCCCCEEEEec----------------------------------------------
Confidence            3588999999999999999999999999997532                                              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                          .|+|++|+.++++.++++|+++  ..++....+++++++++. ..+++++++|||+|+|.+|.+++++|+.+|+++
T Consensus        84 ----~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~  156 (312)
T cd08269          84 ----GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARR  156 (312)
T ss_pred             ----CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                1389999999999999999998  233322368889998765 788999999999988999999999999999933


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++.+++++.+.++++|++++++.+.   .++.+.+.+++.+ ++|++|||+|.......++++++++ |+++.+|...
T Consensus       157 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~  232 (312)
T cd08269         157 VIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ  232 (312)
T ss_pred             EEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence            999999898999889999988888766   6788888888877 9999999998877789999999997 9999998653


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCC-CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce--eEEEE
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVI  335 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl  335 (339)
                       .....+++..+..++.++.++..... ...+.+++++++++++.+.+..++.++|+++++++|++.+.++..  +|+++
T Consensus       233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         233 -DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             -CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence             23344555566677888776643322 123568889999999988765445688999999999999988854  48876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.97  E-value=1.3e-29  Score=232.81  Aligned_cols=260  Identities=22%  Similarity=0.272  Sum_probs=213.4

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      +|.++|||++|+|+++|++++.|++||+|+....                             .                
T Consensus        63 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-----------------------------~----------------   97 (341)
T cd08290          63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP-----------------------------G----------------   97 (341)
T ss_pred             CCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC-----------------------------C----------------
Confidence            6889999999999999999999999999975321                             0                


Q ss_pred             ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                         .|+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.++++|||+|+ |++|++++|+|++.|+ +
T Consensus        98 ---~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~  173 (341)
T cd08290          98 ---LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K  173 (341)
T ss_pred             ---CccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence               1389999999999999999999999999999999999998877788899999999986 9999999999999999 7


Q ss_pred             EEEEcCCh----hHHHHHHhcCCceEEeCCCCCCc---cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          180 IIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       180 Vi~~~~~~----~~~~~~~~~ga~~vi~~~~~~~~---~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      ++++++++    ++.+.++++|++++++++.   .   ++.+.+..+..+++|++|||+|+.. +..++++++++ |+++
T Consensus       174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v  248 (341)
T cd08290         174 TINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMV  248 (341)
T ss_pred             EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEE
Confidence            88887765    6688888899999998776   4   6777777776558999999999877 77899999997 9999


Q ss_pred             EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeee---chhhHHHHH
Q 019535          253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAF  322 (339)
Q Consensus       253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~~A~  322 (339)
                      .+|.... ....++...++.++.++.+........       ...+..+++++.++.+.+.  ...++   +++++++|+
T Consensus       249 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~  325 (341)
T cd08290         249 TYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDAL  325 (341)
T ss_pred             EEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHH
Confidence            9986432 233455556677899998876443210       1146778889999987654  33566   999999999


Q ss_pred             HHHhcCcee-EEEEEe
Q 019535          323 DLLIKGKCL-RCVIWM  337 (339)
Q Consensus       323 ~~~~~~~~~-kvvl~~  337 (339)
                      +.+.++... |+|+++
T Consensus       326 ~~~~~~~~~~k~v~~~  341 (341)
T cd08290         326 ANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHhhcCCCCeEEEeC
Confidence            999887766 998875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.97  E-value=1.9e-29  Score=231.19  Aligned_cols=259  Identities=17%  Similarity=0.175  Sum_probs=204.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.|++||+|+....                           +...             
T Consensus        56 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~-------------   95 (336)
T TIGR02817        56 AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD---------------------------IDRP-------------   95 (336)
T ss_pred             CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------------CCCC-------------
Confidence            357889999999999999999999999999964210                           0111             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCEEEEEcc-CHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGA  172 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VLI~G~-G~iG~~a~~la  172 (339)
                            |+|++|++++++.++++|+++++++++.+++++.|||+++....++.+     +++|||+|+ |++|++++|+|
T Consensus        96 ------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~a  169 (336)
T TIGR02817        96 ------GSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLA  169 (336)
T ss_pred             ------CcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence                  389999999999999999999999999999999999998878888876     999999986 99999999999


Q ss_pred             HHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          173 RLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       173 ~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      +.+ |+ +|+++++++++.+.++++|+++++++..    ++.+.+++..++++|+++|++++.......+++++++ |++
T Consensus       170 k~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~  243 (336)
T TIGR02817       170 RQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRF  243 (336)
T ss_pred             HHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEE
Confidence            998 99 8999999999999999999999988543    5677777754448999999987766689999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecC--CCCC-------CCcHHHHHHHHhCCCCCCcccceeee---chhhHH
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG--GLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEIN  319 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~  319 (339)
                      +.++..     ..++...+..+++++.+..+.  ....       ...+.++++++.++.+.+.  +++.+   ++++++
T Consensus       244 v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~  316 (336)
T TIGR02817       244 ALIDDP-----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLK  316 (336)
T ss_pred             EEEccc-----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHH
Confidence            988532     133444455555666653322  1100       1236778899999977543  33445   478999


Q ss_pred             HHHHHHhcCcee-EEEEE
Q 019535          320 SAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       320 ~A~~~~~~~~~~-kvvl~  336 (339)
                      +|++.++++... |+++.
T Consensus       317 ~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       317 RAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHcCCccceEEEe
Confidence            999999888765 87764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.5e-29  Score=224.16  Aligned_cols=244  Identities=31%  Similarity=0.450  Sum_probs=201.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|+.|+.    .|+....   .+....|           
T Consensus        26 ~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~g-----------   87 (271)
T cd05188          26 PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGI---LGEGLDG-----------   87 (271)
T ss_pred             CCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCE---eccccCC-----------
Confidence            346789999999999999999999999999999999999999999997    6654442   3333333           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.++++|||+|+|++|++++++++..|.
T Consensus        88 --------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~  159 (271)
T cd05188          88 --------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA  159 (271)
T ss_pred             --------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                    999999999999999999999999999999999999988777777899999999986699999999999998


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|+..+++..+   .+..+.+. ...+ ++|++|++++.....+.++++++++ |+++.++.
T Consensus       160 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~  233 (271)
T cd05188         160 -RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGG  233 (271)
T ss_pred             -eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEcc
Confidence             9999999999999999999888888776   56666666 5555 8999999999855589999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHH
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR  297 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  297 (339)
                      ...... .......+.+++++.++.....   +++++++++
T Consensus       234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  270 (271)
T cd05188         234 TSGGPP-LDDLRRLLFKELTIIGSTGGTR---EDFEEALDL  270 (271)
T ss_pred             CCCCCC-cccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence            643322 2223456778999988865432   456666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=2.9e-29  Score=213.99  Aligned_cols=259  Identities=21%  Similarity=0.235  Sum_probs=212.9

Q ss_pred             CCcccCCceeEEEEEec--CCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           21 FPRILGHEAIGVVESVG--ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      -|+-+|-..+|.++...  |+...|++||.|+..                                              
T Consensus        67 ~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----------------------------------------------  100 (340)
T COG2130          67 PPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----------------------------------------------  100 (340)
T ss_pred             CCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------------------------------
Confidence            46667776666665543  456789999999642                                              


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccc--cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                            .+|+||..++.+.+.|+.+..-+..  ...+.++..|||.+|++..+++.|++|+|-|+ |++|..+.|+||..
T Consensus       101 ------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlk  174 (340)
T COG2130         101 ------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK  174 (340)
T ss_pred             ------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhh
Confidence                  1899999999999999986533222  23477799999999999999999999999986 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|++++.+++|.+++++ +|.+.++|++.   +++.+.+++.+..++|+.||++|++. ++..+..|+.. +|++.+
T Consensus       175 G~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~C  248 (340)
T COG2130         175 GC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVC  248 (340)
T ss_pred             CC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeee
Confidence            99 99999999999999988 99999999999   89999999999899999999999998 99999999997 999999


Q ss_pred             ccCCC--C---CcccccHHHHhhcCCeEEeeecC-CCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535          255 GVDQP--G---SQLSLSSFEVLHSGKILMGSLFG-GLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       255 g~~~~--~---~~~~~~~~~~~~~~~~i~~~~~~-~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      |....  .   ....-.+..++.+.+++.|+... .+..  .+-++++.+++++|+|+.+.  +-+-+|+++++||.-+-
T Consensus       249 G~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl  326 (340)
T COG2130         249 GAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLL  326 (340)
T ss_pred             eehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHh
Confidence            95321  1   11223344567778999998762 2221  13467889999999998874  44557999999999999


Q ss_pred             cCcee-EEEEEeCC
Q 019535          327 KGKCL-RCVIWMGE  339 (339)
Q Consensus       327 ~~~~~-kvvl~~~~  339 (339)
                      ++++. |+|+++.+
T Consensus       327 ~G~N~GK~vvKv~~  340 (340)
T COG2130         327 SGKNFGKLVVKVAD  340 (340)
T ss_pred             cCCccceEEEEecC
Confidence            99988 99999864

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=5.7e-30  Score=231.92  Aligned_cols=227  Identities=22%  Similarity=0.332  Sum_probs=176.8

Q ss_pred             ccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhc------CCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535          105 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus       105 g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~------~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                      |+|+||+++|+..++++|+++++++||++|+++.|||.++....      +++++++|||+|+ |++|++++|+|+..++
T Consensus       104 g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~  183 (347)
T KOG1198|consen  104 GGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA  183 (347)
T ss_pred             CceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC
Confidence            49999999999999999999999999999999999999999999      8999999999976 8999999999999995


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       ..++++.++++.++++++|+++++|+++   .++.+++++.++++||+||||+|++. ......++... |+...++..
T Consensus       184 -~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~  257 (347)
T KOG1198|consen  184 -IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLV  257 (347)
T ss_pred             -cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEec
Confidence             4555556899999999999999999999   99999999998449999999999986 67777777775 765555432


Q ss_pred             CCC-Cccccc-----HHHHhhcCCeEEeee---cCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          258 QPG-SQLSLS-----SFEVLHSGKILMGSL---FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       258 ~~~-~~~~~~-----~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      .+. ......     ...+......+.+..   .......+.+..+.++++++++++  .+.+.||++++.+|++.++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~~  335 (347)
T KOG1198|consen  258 GDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEKS  335 (347)
T ss_pred             cccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhhc
Confidence            211 011111     000000011111111   111223456888999999996554  488999999999999999987


Q ss_pred             cee-EEEEEeCC
Q 019535          329 KCL-RCVIWMGE  339 (339)
Q Consensus       329 ~~~-kvvl~~~~  339 (339)
                      +.. |+++.+.+
T Consensus       336 ~~~GK~vl~~~~  347 (347)
T KOG1198|consen  336 HATGKVVLEKDV  347 (347)
T ss_pred             CCcceEEEEecC
Confidence            766 99998753

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.97  E-value=3.2e-29  Score=228.82  Aligned_cols=263  Identities=17%  Similarity=0.251  Sum_probs=209.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+.+|++++.+++||+|+...                             ..              
T Consensus        55 ~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-----------------------------~~--------------   91 (327)
T PRK10754         55 PSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQ-----------------------------SA--------------   91 (327)
T ss_pred             CCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECC-----------------------------CC--------------
Confidence            34688999999999999999999999999996311                             00              


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                           .|+|++|+.++.+.++++|+++++++++.+++++.|||.++.....+.++++|+|+|+ |.+|++++++|+.+|+
T Consensus        92 -----~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~  166 (327)
T PRK10754         92 -----LGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA  166 (327)
T ss_pred             -----CcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC
Confidence                 1389999999999999999999999999888899999998878788999999999975 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.++++++|++.+++.+.   .++.+.+++++.+ ++|++|||+++.. ....+++++++ |+++.+|.
T Consensus       167 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~  240 (327)
T PRK10754        167 -KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGN  240 (327)
T ss_pred             -EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEcc
Confidence             8999999999999999999988888776   7788888998887 9999999999865 88899999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEE--eeecCCCCCCC----cHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          257 DQPGSQLSLSSFEVLHSGKILM--GSLFGGLKAKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~----~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ... ....++...+..++....  ....+.....+    .+..+++++.++++.+..++.++|+++++.++++.++++..
T Consensus       241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~  319 (327)
T PRK10754        241 ASG-PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRAT  319 (327)
T ss_pred             CCC-CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCC
Confidence            532 112233333333222111  11101111111    24567889999988765555689999999999999988776


Q ss_pred             e-EEEEE
Q 019535          331 L-RCVIW  336 (339)
Q Consensus       331 ~-kvvl~  336 (339)
                      . |+||.
T Consensus       320 ~~~~~~~  326 (327)
T PRK10754        320 QGSSLLI  326 (327)
T ss_pred             cceEEEe
Confidence            5 99985

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.5e-28  Score=222.06  Aligned_cols=250  Identities=20%  Similarity=0.258  Sum_probs=203.4

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      .|.++|||++|+|+++|++++.|++||+|+...                              ..               
T Consensus        51 ~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------------------------~~---------------   85 (305)
T cd08270          51 DGAVPGWDAAGVVERAAADGSGPAVGARVVGLG------------------------------AM---------------   85 (305)
T ss_pred             CCCcccceeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC---------------
Confidence            478899999999999999999999999996421                              11               


Q ss_pred             ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                          |+|++|+.++.+.++++|+++++++++.+++.+.|||+++...... ++++|+|+|+ |++|++++++|+..|+ +
T Consensus        86 ----g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~  159 (305)
T cd08270          86 ----GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-H  159 (305)
T ss_pred             ----cceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-E
Confidence                3899999999999999999999999999999999999987665545 5999999987 9999999999999999 8


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      |+.+++++++.+.++++|++.++....           ++..+++|+++|++|+.. ...++++++.+ |+++.+|... 
T Consensus       160 v~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-  225 (305)
T cd08270         160 VVAVVGSPARAEGLRELGAAEVVVGGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-  225 (305)
T ss_pred             EEEEeCCHHHHHHHHHcCCcEEEeccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-
Confidence            999999999999999999876654322           122247999999999875 89999999997 9999998754 


Q ss_pred             CCcccccHHHHhh--cCCeEEeeecCC-CCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          260 GSQLSLSSFEVLH--SGKILMGSLFGG-LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       260 ~~~~~~~~~~~~~--~~~~i~~~~~~~-~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      .....++...+..  ++.++.+..+.. ....+.+..+++++.++++.+.  +.++++++++++|++.+.++... |+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi  303 (305)
T cd08270         226 GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVL  303 (305)
T ss_pred             CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEE
Confidence            2333445555444  588888776543 1112457788999999988754  56899999999999999887766 9888


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      .+
T Consensus       304 ~~  305 (305)
T cd08270         304 DV  305 (305)
T ss_pred             eC
Confidence            64

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.3e-28  Score=221.99  Aligned_cols=261  Identities=24%  Similarity=0.337  Sum_probs=205.7

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ...|.++|||++|+|+++|+  ..+++||+|+....                        .++...+             
T Consensus        54 ~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~------------------------~~~~~~~-------------   94 (320)
T cd08243          54 VKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMG------------------------GMGRTFD-------------   94 (320)
T ss_pred             CCCCccccceeEEEEEEecC--CCCCCCCEEEEecC------------------------CCCCCCC-------------
Confidence            35678999999999999995  57999999975421                        0111112             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|+.+++..++++|+++++++++.+++++.|||+++.+..++.++++|||+|+ |++|++++|+|+.+|+
T Consensus        95 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~  168 (320)
T cd08243          95 ------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA  168 (320)
T ss_pred             ------cccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC
Confidence                  389999999999999999999999999999999999998888888999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|++++++. .   .++.+.+.++ ++++|+++|++++.. ++.++++++++ |+++.+|..
T Consensus       169 -~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~  240 (320)
T cd08243         169 -TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLL  240 (320)
T ss_pred             -EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccC
Confidence             89999999999999999999888754 3   4677777777 449999999999865 89999999997 999999864


Q ss_pred             CCCCcc-cccHHHH--hhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          258 QPGSQL-SLSSFEV--LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       258 ~~~~~~-~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      ...... .......  ..+++++.+....... .+.+.++++++.++.+.+.  ..+.|+++++++|++.+.++... |+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kv  317 (320)
T cd08243         241 GGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKV  317 (320)
T ss_pred             CCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcE
Confidence            322111 1112222  2456666655432211 2347788899999977643  56889999999999999877665 77


Q ss_pred             EE
Q 019535          334 VI  335 (339)
Q Consensus       334 vl  335 (339)
                      ++
T Consensus       318 vv  319 (320)
T cd08243         318 VV  319 (320)
T ss_pred             Ee
Confidence            65

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=2.7e-28  Score=217.54  Aligned_cols=247  Identities=27%  Similarity=0.415  Sum_probs=197.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      -++|.++|||++|+|+++|+++++|++||+|+..                                              
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------   51 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------   51 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence            3699999999999999999999999999999642                                              


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                            +.|++|+.++.+.++++|+++++++++.+ +++.|||+++ ...++++++++||+|+|.+|++++++|+.+|++
T Consensus        52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~  123 (277)
T cd08255          52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR  123 (277)
T ss_pred             ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                  16899999999999999999999998888 7899999976 578899999999998899999999999999994


Q ss_pred             EEEEEcCChhHHHHHHhcC-CceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          179 RIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|+++++++++.+.++++| ++.+++...           ..+.+ ++|++||+++........+++++++ |+++.+|.
T Consensus       124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~  191 (277)
T cd08255         124 EVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW  191 (277)
T ss_pred             cEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEec
Confidence            3999999999999989998 555543321           12234 8999999998777789999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCC---------CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK  327 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  327 (339)
                      ....  .......+..+..++.+......         ...+.++++++++.++.+..  .+.+.|+++++++|++.+.+
T Consensus       192 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~  267 (277)
T cd08255         192 YGLK--PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFE  267 (277)
T ss_pred             cCCC--ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHc
Confidence            5432  11122334445667766543321         11256889999999997554  35688999999999999987


Q ss_pred             C--ceeEEEE
Q 019535          328 G--KCLRCVI  335 (339)
Q Consensus       328 ~--~~~kvvl  335 (339)
                      +  ...|+++
T Consensus       268 ~~~~~~k~~~  277 (277)
T cd08255         268 DPPECLKVVL  277 (277)
T ss_pred             CCccceeeeC
Confidence            7  3448764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.97  E-value=7.9e-28  Score=219.47  Aligned_cols=263  Identities=18%  Similarity=0.227  Sum_probs=199.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|  +++|++||+|+..+.                        .+|...+|             
T Consensus        56 ~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~------------------------~~~~~~~g-------------   96 (326)
T cd08289          56 RYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSY------------------------DLGVSHHG-------------   96 (326)
T ss_pred             CCCcCcccceeEEEEEcC--CCCCCCCCEEEEccc------------------------ccCCCCCC-------------
Confidence            568999999999999964  568999999976431                        02222233             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhc--CC-CCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA--NV-EVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~--~~-~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                            +|++|+.++++.++++|+++++++++.+++++.||+.++....  .+ ..+++|||+|+ |.+|++++|+|+.+
T Consensus        97 ------~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (326)
T cd08289          97 ------GYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL  170 (326)
T ss_pred             ------cceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence                  9999999999999999999999999999999999998765432  23 34689999987 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+ +|+++++++++.+.++++|++++++.++   . ..+.+.++.++++|++||++|+.. ...++++++++ |+++.+|
T Consensus       171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g  243 (326)
T cd08289         171 GY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSG  243 (326)
T ss_pred             CC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEe
Confidence            99 8999999999999999999988888765   3 345566664348999999999865 89999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCC---CcccceeeechhhHHHHHHHHhcCcee-
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE---LDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~---~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      ... ....+++...++.+++++.+....... ......+++.+.. .+.   ....+.++|+++++++|++.+.++... 
T Consensus       244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g  320 (326)
T cd08289         244 LTG-GGEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTG  320 (326)
T ss_pred             ecC-CCCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccc
Confidence            753 223344455566778988887432110 1122233333322 121   112347999999999999999888776 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+++++
T Consensus       321 kvvv~~  326 (326)
T cd08289         321 RTVVKL  326 (326)
T ss_pred             eEEEeC
Confidence            888763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.97  E-value=4.3e-28  Score=221.54  Aligned_cols=258  Identities=24%  Similarity=0.287  Sum_probs=208.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+...                                             
T Consensus        58 ~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------------------------   92 (329)
T cd08250          58 VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS---------------------------------------------   92 (329)
T ss_pred             CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------------------------------
Confidence            46788999999999999999999999999996421                                             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                           .|+|++|+.++.+.++++|++  +.+++.+++++.|||+++.+..++.++++|+|+|+ |.+|++++++|+..|+
T Consensus        93 -----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~  165 (329)
T cd08250          93 -----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC  165 (329)
T ss_pred             -----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence                 138999999999999999997  35677788899999998888788999999999986 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|++.+++.++   .++.+.+.+..++++|++||++|+.. +..++++++++ |+++.+|..
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~  239 (329)
T cd08250         166 -HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFI  239 (329)
T ss_pred             -eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecc
Confidence             8999999999999999999988888776   56667776665458999999999755 89999999997 999999865


Q ss_pred             CCCC---------cccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535          258 QPGS---------QLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       258 ~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      ....         ...+. ...+.++.++.+.......  ..+.+.++++++.++.+.+.....+.++++++++|++.+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~  318 (329)
T cd08250         240 SGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLY  318 (329)
T ss_pred             cCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHH
Confidence            3211         01222 2345678888877543221  1234677889998997766433446799999999999998


Q ss_pred             cCcee-EEEE
Q 019535          327 KGKCL-RCVI  335 (339)
Q Consensus       327 ~~~~~-kvvl  335 (339)
                      ++... |+++
T Consensus       319 ~~~~~~kvvv  328 (329)
T cd08250         319 SGKNIGKVVV  328 (329)
T ss_pred             cCCCCceEEe
Confidence            87665 8776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=1.2e-27  Score=216.68  Aligned_cols=260  Identities=22%  Similarity=0.304  Sum_probs=213.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++++++||+|+...                              ..              
T Consensus        53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~------------------------------~~--------------   88 (320)
T cd05286          53 PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG------------------------------PP--------------   88 (320)
T ss_pred             CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec------------------------------CC--------------
Confidence            4678999999999999999999999999996421                              01              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|++|+.++.+.++++|++++..+++.+++.+.++++++.+..++.++++|||+|+ |++|++++++++.+|+ 
T Consensus        89 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-  162 (320)
T cd05286          89 -----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-  162 (320)
T ss_pred             -----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999999999999998888888999999999995 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++++++++.+.++++|++++++..+   .++.+.+.+++.+ ++|++|+|+++.. ...++++++++ |+++.+|..
T Consensus       163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~  237 (320)
T cd05286         163 TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNA  237 (320)
T ss_pred             EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecC
Confidence            8999999999999999999988888776   6788888888877 9999999999865 88999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCC-----CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      ... ...++...+..+++++.+.........     +.+.++++++.++.+.+.  .++.|+++++++|++.+.++... 
T Consensus       238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~  314 (320)
T cd05286         238 SGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTG  314 (320)
T ss_pred             CCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCc
Confidence            322 223444444467888876543322111     224567888888877654  56889999999999999887766 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+++.+
T Consensus       315 ~vv~~~  320 (320)
T cd05286         315 KLLLIP  320 (320)
T ss_pred             eEEEeC
Confidence            888753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.96  E-value=8.9e-28  Score=218.91  Aligned_cols=261  Identities=20%  Similarity=0.213  Sum_probs=199.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++  +++.+++||+|+..+.                        .+|+..+|             
T Consensus        56 ~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~------------------------~~g~~~~g-------------   96 (325)
T cd05280          56 NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY------------------------DLGMNTDG-------------   96 (325)
T ss_pred             CCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc------------------------ccCCCCCc-------------
Confidence            46889999999999999  4668999999975421                        03333333             


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC--CC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN--VE-VGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~--~~-~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                            +|++|+.++++.++++|+++++++++.+++.+.|||.++.....  +. .+++|||+|+ |.+|++++++|+.+
T Consensus        97 ------~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (325)
T cd05280          97 ------GFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKL  170 (325)
T ss_pred             ------eeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence                  89999999999999999999999999999999999998755433  34 3579999987 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++++++++.+.++++|++++++.++   .  ...+.+...+ ++|++||++++.. +..++++++++ |+++.+
T Consensus       171 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~  242 (325)
T cd05280         171 GY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASC  242 (325)
T ss_pred             CC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEE
Confidence            99 7999999999999999999998887654   2  2223333344 8999999999865 99999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      |..... ...++...++.+++++.+........   .+.++.+.+++..+..   ..+..+|+++++++|++.+.++...
T Consensus       243 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~  318 (325)
T cd05280         243 GNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHR  318 (325)
T ss_pred             ecCCCC-ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcc
Confidence            875322 22444445556788888765443221   0123344444555522   2356899999999999999888766


Q ss_pred             -EEEEEe
Q 019535          332 -RCVIWM  337 (339)
Q Consensus       332 -kvvl~~  337 (339)
                       |+++++
T Consensus       319 gk~vv~~  325 (325)
T cd05280         319 GRTVVKI  325 (325)
T ss_pred             eEEEEeC
Confidence             988864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.96  E-value=8.4e-28  Score=220.60  Aligned_cols=261  Identities=23%  Similarity=0.314  Sum_probs=204.9

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++.+++||+|+..+...|+                      +...+              
T Consensus        53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~----------------------~~~~~--------------   96 (339)
T cd08249          53 SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP----------------------NDPRN--------------   96 (339)
T ss_pred             CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC----------------------CCCCC--------------
Confidence            468899999999999999999999999999865432221                      00112              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCC----------CCCCEEEEEcc-CHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAV  168 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~----------~~~~~VLI~G~-G~iG~~a  168 (339)
                           |+|++|++++.+.++++|+++++++++.+++++.|||+++.+..++          .++++|||+|+ |.+|+++
T Consensus        97 -----g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~  171 (339)
T cd08249          97 -----GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA  171 (339)
T ss_pred             -----CcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence                 3899999999999999999999999999999999999987666544          68999999997 8999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc--
Q 019535          169 AEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK--  246 (339)
Q Consensus       169 ~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~--  246 (339)
                      +++|+.+|+ +|+++. ++++.+.++++|++++++..+   .++.+.+++++++++|++||++|++..+..+++++++  
T Consensus       172 ~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~  246 (339)
T cd08249         172 IQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSG  246 (339)
T ss_pred             HHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccC
Confidence            999999999 888887 568888999999999999877   7788888877766999999999985559999999999  


Q ss_pred             CCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC---------CCCCCcHHHHHHHHhCCCCCCcccceeeec--h
Q 019535          247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG---------LKAKSDIPILLKRYMDKELELDKFVTHEMK--F  315 (339)
Q Consensus       247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~--l  315 (339)
                      + |+++.+|......  .+      ..+.++.......         ......+..+++++.++++.+.  ....++  +
T Consensus       247 ~-g~~v~~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~  315 (339)
T cd08249         247 G-GKLVSLLPVPEET--EP------RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGL  315 (339)
T ss_pred             C-CEEEEecCCCccc--cC------CCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcH
Confidence            9 9999998653221  00      1122222211111         1112346678889999988765  235567  9


Q ss_pred             hhHHHHHHHHhcCc-ee-EEEEEe
Q 019535          316 EEINSAFDLLIKGK-CL-RCVIWM  337 (339)
Q Consensus       316 ~~~~~A~~~~~~~~-~~-kvvl~~  337 (339)
                      +++++|++.+.++. .. |+|+++
T Consensus       316 ~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         316 EGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHCCCccceEEEEeC
Confidence            99999999998887 65 999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.96  E-value=3.3e-27  Score=215.11  Aligned_cols=261  Identities=20%  Similarity=0.220  Sum_probs=201.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|++  +++..|++||+|+....                        ..|...+|            
T Consensus        54 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~------------------------~~~~~~~g------------   95 (323)
T TIGR02823        54 RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGY------------------------GLGVSHDG------------   95 (323)
T ss_pred             CCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccC------------------------CCCCCCCc------------
Confidence            35689999999999998  56778999999975421                        02222223            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh--cCCCCCC-EEEEEcc-CHHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARL  174 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~~~-~VLI~G~-G~iG~~a~~la~~  174 (339)
                             ++++|+.++.+.++++|+++++++++.+++.+.+|+.++...  .++.+++ +|||+|+ |.+|++++++|+.
T Consensus        96 -------~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~  168 (323)
T TIGR02823        96 -------GYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK  168 (323)
T ss_pred             -------cceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHH
Confidence                   999999999999999999999999999999999998876433  3478888 9999997 9999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +|+ ++++++.++++.+.++++|++.+++.++   .+.  .++.+..+++|+++||+|+.. +..++++++++ |+++.+
T Consensus       169 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~  240 (323)
T TIGR02823       169 LGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAAC  240 (323)
T ss_pred             cCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEE
Confidence            999 7888888888889999999988887654   222  444554447999999999876 88999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      |... ......+...++.++.++.+........   .+.+..+.+++..+.+..  + .+.|+++++++|++.+.++...
T Consensus       241 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~  316 (323)
T TIGR02823       241 GLAG-GPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHR  316 (323)
T ss_pred             cccC-CCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCcc
Confidence            9753 2233444455657788888865332111   112455666666776543  3 4689999999999999888766


Q ss_pred             -EEEEE
Q 019535          332 -RCVIW  336 (339)
Q Consensus       332 -kvvl~  336 (339)
                       |++++
T Consensus       317 ~k~vv~  322 (323)
T TIGR02823       317 GRTVVD  322 (323)
T ss_pred             ceEEEe
Confidence             88875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=3.7e-27  Score=212.23  Aligned_cols=260  Identities=23%  Similarity=0.315  Sum_probs=206.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      +.+|.++|||++|+|+++|++++++++||+|+.....                            .+             
T Consensus        35 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------------------------~~-------------   73 (303)
T cd08251          35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------------------------SM-------------   73 (303)
T ss_pred             CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------------------------CC-------------
Confidence            4678899999999999999999999999999753210                            11             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|++++++.++++|+++++++++.+++++.|||+++ +..+++++++++|+|+ |.+|++++|+++.+|+
T Consensus        74 ------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~  146 (303)
T cd08251          74 ------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA  146 (303)
T ss_pred             ------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Confidence                  3899999999999999999999999999999999999976 5788999999999965 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++.+++...   .++.+.+.+++.+ ++|+++|++++.. ....+++++++ |+++.+|.
T Consensus       147 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~  220 (303)
T cd08251         147 -EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAM  220 (303)
T ss_pred             -EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHHhccC-cEEEEEec
Confidence             8999999999999999999999998877   6788888888887 9999999998655 88999999997 99999976


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ........+....+ .++..+....+....      ..+.+.++++++.++.+.+  +.++.|++++++++++.+.++..
T Consensus       221 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~  297 (303)
T cd08251         221 TALKSAPSVDLSVL-SNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDREN  297 (303)
T ss_pred             cCCCccCccChhHh-hcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCC
Confidence            43222222333332 224444332211110      1123667888888887654  35688999999999999987766


Q ss_pred             e-EEEE
Q 019535          331 L-RCVI  335 (339)
Q Consensus       331 ~-kvvl  335 (339)
                      . |+++
T Consensus       298 ~~~iv~  303 (303)
T cd08251         298 IGKVVV  303 (303)
T ss_pred             cceEeC
Confidence            5 7663

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.96  E-value=4.4e-27  Score=215.43  Aligned_cols=261  Identities=20%  Similarity=0.173  Sum_probs=207.3

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ++|.++|||++|+|+++|+++..|++||+|.....                           +..+              
T Consensus        58 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------------------------~~~~--------------   96 (336)
T cd08252          58 GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD---------------------------ITRP--------------   96 (336)
T ss_pred             CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC---------------------------CCCC--------------
Confidence            46789999999999999999999999999964210                           0112              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCEEEEEcc-CHHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VLI~G~-G~iG~~a~~la~  173 (339)
                           |+|++|+.++.+.++++|+++++++++.+++++.|||+++.+..++.+     +++|+|+|+ |.+|++++++|+
T Consensus        97 -----g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~  171 (336)
T cd08252          97 -----GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAK  171 (336)
T ss_pred             -----ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHH
Confidence                 389999999999999999999999999999999999998878888877     999999985 999999999999


Q ss_pred             HcC-CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          174 LCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       174 ~~G-~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+| + +|+++++++++.+.++++|++++++...    ++.+.+.....+++|++||+++....+..++++++.+ |+++
T Consensus       172 ~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v  245 (336)
T cd08252         172 QLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHIC  245 (336)
T ss_pred             HcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEE
Confidence            999 7 8999999999999999999988887653    4556665443348999999999766699999999997 9999


Q ss_pred             EeccCCCCCcccccHHHHhhcCCeEEeeecCCCC--C-------CCcHHHHHHHHhCCCCCCccc-ceeeechhhHHHHH
Q 019535          253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK--A-------KSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAF  322 (339)
Q Consensus       253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~-------~~~~~~~~~~l~~g~l~~~~~-i~~~~~l~~~~~A~  322 (339)
                      .+|...    ..++...+..++.++.+..+....  .       .+.+.++++++.++.+.+... ..+.++++++++|+
T Consensus       246 ~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~  321 (336)
T cd08252         246 LIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAH  321 (336)
T ss_pred             EecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHH
Confidence            998642    233444444567887765433210  1       123677889999997764311 12457999999999


Q ss_pred             HHHhcCcee-EEEEE
Q 019535          323 DLLIKGKCL-RCVIW  336 (339)
Q Consensus       323 ~~~~~~~~~-kvvl~  336 (339)
                      +.+.++... |++++
T Consensus       322 ~~~~~~~~~~~vv~~  336 (336)
T cd08252         322 ALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHcCCccceEEeC
Confidence            999888766 88763

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.96  E-value=7.3e-27  Score=211.86  Aligned_cols=259  Identities=21%  Similarity=0.293  Sum_probs=213.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.+++||+|+...                              .+             
T Consensus        55 ~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~------------------------------~~-------------   91 (323)
T cd05276          55 PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL------------------------------AG-------------   91 (323)
T ss_pred             CCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec------------------------------CC-------------
Confidence            35688999999999999999999999999996431                              11             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+
T Consensus        92 ------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~  165 (323)
T cd05276          92 ------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA  165 (323)
T ss_pred             ------CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC
Confidence                  289999999999999999999999999999999999998888788999999999986 8999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++.+++++.+.++++|++.+++...   .++.+.+.+.+.+ ++|++|+++|+.. ....++++.++ |+++.+|.
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~  239 (323)
T cd05276         166 -RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGL  239 (323)
T ss_pred             -EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEec
Confidence             8999999889999998899888888776   6777888887766 8999999999877 88899999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCC-------CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK  329 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~  329 (339)
                      .... ...++...++.+++++.+.........       ..+.++++++.++++.+  +.++.|+++++++|++.+.++.
T Consensus       240 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~  316 (323)
T cd05276         240 LGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNE  316 (323)
T ss_pred             CCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCC
Confidence            5322 234455555567888888765442111       12456778888887653  3668999999999999998776


Q ss_pred             ee-EEEE
Q 019535          330 CL-RCVI  335 (339)
Q Consensus       330 ~~-kvvl  335 (339)
                      .. |+++
T Consensus       317 ~~~kvv~  323 (323)
T cd05276         317 HIGKIVL  323 (323)
T ss_pred             CcceEeC
Confidence            55 7653

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=4e-27  Score=210.08  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=205.9

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      .|.++|||++|+|+++|++++.|++||+|+...                                               
T Consensus        23 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------------------------------   55 (288)
T smart00829       23 GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------------------------------   55 (288)
T ss_pred             CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------------------------------
Confidence            468999999999999999999999999996431                                               


Q ss_pred             ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                         .|+|++|+.++.+.++++|+++++++++.+++++.|+|.++.+...+.++++|+|+|+ |.+|++++++++..|+ +
T Consensus        56 ---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~  131 (288)
T smart00829       56 ---PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-E  131 (288)
T ss_pred             ---CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-E
Confidence               1389999999999999999999999999999999999998878888999999999985 9999999999999999 8


Q ss_pred             EEEEcCChhHHHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          180 IIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |+++++++++.+.++++|+  +.++++..   .++.+.+.+.+.+ ++|+++|++++.. ...++++++++ |+++.+|.
T Consensus       132 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~  206 (288)
T smart00829      132 VFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGEF-LDASLRCLAPG-GRFVEIGK  206 (288)
T ss_pred             EEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHHHHhccCC-cEEEEEcC
Confidence            9999999999999999998  77888776   6778888888777 8999999999654 88999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCC-----CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      ........++... +.+++++.+..+....     ..+.+.++++++.++++.+.  ..+.|++++++++++.+..+...
T Consensus       207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  283 (288)
T smart00829      207 RDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHI  283 (288)
T ss_pred             cCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCc
Confidence            4321122233333 3456666654322110     11235678888888876543  45789999999999999887654


Q ss_pred             -EEE
Q 019535          332 -RCV  334 (339)
Q Consensus       332 -kvv  334 (339)
                       |++
T Consensus       284 ~~iv  287 (288)
T smart00829      284 GKVV  287 (288)
T ss_pred             ceEe
Confidence             665

Enoylreductase in Polyketide synthases.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.96  E-value=5.6e-27  Score=214.12  Aligned_cols=253  Identities=21%  Similarity=0.251  Sum_probs=203.2

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      .+.++|+|++|+|+++|++  ++++||+|+..                                                
T Consensus        64 ~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------------------------------------------------   93 (329)
T cd05288          64 LGEPMRGGGVGEVVESRSP--DFKVGDLVSGF------------------------------------------------   93 (329)
T ss_pred             CCCcccCceEEEEEecCCC--CCCCCCEEecc------------------------------------------------
Confidence            4668999999999999964  79999999531                                                


Q ss_pred             ccccccccceEEeec-cceEEcCCCCC--cccccc-ccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535          101 FVSVSSFSEYTVLDI-AHVVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                          ++|++|+.++. +.++++|++++  +.+++. +++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..
T Consensus        94 ----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~  169 (329)
T cd05288          94 ----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLL  169 (329)
T ss_pred             ----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHc
Confidence                17999999999 99999999995  445555 88899999998878788899999999985 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++++++++.+.+++ +|+++++++++   .++.+.+.+++.+++|++|||+|+.. ++.++++++++ |+++.+
T Consensus       170 G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~  243 (329)
T cd05288         170 GA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALC  243 (329)
T ss_pred             CC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEE
Confidence            99 89999999999999988 99989998877   67788888877558999999999865 99999999997 999999


Q ss_pred             ccCCCCCcc----cccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          255 GVDQPGSQL----SLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       255 g~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      |........    .++....+.++.++.+........  .+.+.++++++.++.+.+..  ...++++++.++++.+.++
T Consensus       244 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~  321 (329)
T cd05288         244 GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTG  321 (329)
T ss_pred             eeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcC
Confidence            865322211    123444566788888765433211  13467788999999877653  3568999999999999877


Q ss_pred             cee-EEEE
Q 019535          329 KCL-RCVI  335 (339)
Q Consensus       329 ~~~-kvvl  335 (339)
                      ... |+++
T Consensus       322 ~~~gkvvv  329 (329)
T cd05288         322 KNTGKLVV  329 (329)
T ss_pred             CCccceeC
Confidence            655 7663

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.96  E-value=1.7e-26  Score=209.83  Aligned_cols=265  Identities=24%  Similarity=0.341  Sum_probs=213.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++.|++||+|+..+..                        .+ ...             
T Consensus        55 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~------------------------~~-~~~-------------   96 (325)
T cd08253          55 PPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG------------------------WG-RRQ-------------   96 (325)
T ss_pred             CCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc------------------------cC-CCC-------------
Confidence            4578899999999999999999999999999764310                        00 011             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++++|+|+ |.+|++++++++..|+
T Consensus        97 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~  170 (325)
T cd08253          97 ------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA  170 (325)
T ss_pred             ------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence                  389999999999999999999999999999999999998888788999999999986 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++.+++...   .++.+.+.+++.+ ++|+++++++... ....+++++.+ |+++.++.
T Consensus       171 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~  244 (325)
T cd08253         171 -RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGS  244 (325)
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEee
Confidence             8999999999999998899988888776   6777888887776 9999999999876 78889999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      ..  ....+++..++.++.++.+........   .+.+..+.+++.++.+.+  +.++.|++++++++++.+.++... |
T Consensus       245 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~k  320 (325)
T cd08253         245 GG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGK  320 (325)
T ss_pred             cC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcce
Confidence            53  223344444556677776654322110   112445666777776543  356889999999999999887666 8


Q ss_pred             EEEEe
Q 019535          333 CVIWM  337 (339)
Q Consensus       333 vvl~~  337 (339)
                      +++++
T Consensus       321 vv~~~  325 (325)
T cd08253         321 VVLDP  325 (325)
T ss_pred             EEEeC
Confidence            88753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.96  E-value=1e-26  Score=211.40  Aligned_cols=260  Identities=20%  Similarity=0.254  Sum_probs=213.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++.+++||+|+...                              .+              
T Consensus        56 ~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~------------------------------~~--------------   91 (325)
T TIGR02824        56 GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV------------------------------AG--------------   91 (325)
T ss_pred             CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc------------------------------CC--------------
Confidence            4578999999999999999999999999996421                              11              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|++|+.++.+.++++|+++++.+++.+++++.|+|+++.+...+.++++++|+|+ |++|++++++++..|+ 
T Consensus        92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-  165 (325)
T TIGR02824        92 -----GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-  165 (325)
T ss_pred             -----CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence                 289999999999999999999999999999999999998888889999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++.+++++.+.++.+|++.+++...   .++.+.+.+...+ ++|++++++++.. +..++++++++ |+++.+|..
T Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~  240 (325)
T TIGR02824       166 RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQ  240 (325)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecC
Confidence            8999998998888888899888887766   6677788887776 8999999999865 88999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ..... .+++..++.+++++.+........       ...+.++++++.++.+.+  +.++.++++++.++++.+.++..
T Consensus       241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~  317 (325)
T TIGR02824       241 GGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDH  317 (325)
T ss_pred             CCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCC
Confidence            32222 455555657899998876444211       112456778888887653  35688999999999999887766


Q ss_pred             e-EEEEEe
Q 019535          331 L-RCVIWM  337 (339)
Q Consensus       331 ~-kvvl~~  337 (339)
                      . |+++++
T Consensus       318 ~~~~v~~~  325 (325)
T TIGR02824       318 IGKIVLTV  325 (325)
T ss_pred             cceEEEeC
Confidence            5 888753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2.4e-26  Score=209.12  Aligned_cols=264  Identities=25%  Similarity=0.320  Sum_probs=211.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++.|++||+|+..+.                         .++..+              
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~~~--------------   96 (328)
T cd08268          56 PLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA-------------------------ADLGQY--------------   96 (328)
T ss_pred             CCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccc-------------------------cccCCC--------------
Confidence            45889999999999999999999999999976432                         111112              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |.+++|+.++.+.++++|+++++++++.+++++.++|.++.....+.++++++|+|+ |.+|++++++++..|+ 
T Consensus        97 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-  170 (328)
T cd08268          97 -----GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-  170 (328)
T ss_pred             -----ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999999999999998888888999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +++.+++++++.+.++++|...+++.+.   ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|..
T Consensus       171 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~  245 (328)
T cd08268         171 TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGAL  245 (328)
T ss_pred             EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeC
Confidence            8999998999999998899888888776   6777778887776 8999999999865 88999999997 999999865


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCC-CCC----cHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLK-AKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~----~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      .. ....++....+.+++++.+....... ..+    .+..+.+++.++.+.+.  .+..|+++++.++++.+.++... 
T Consensus       246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  322 (328)
T cd08268         246 SG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIG  322 (328)
T ss_pred             CC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCc
Confidence            32 22234444456778888776543211 111    23445556667765543  56889999999999999877665 


Q ss_pred             EEEEE
Q 019535          332 RCVIW  336 (339)
Q Consensus       332 kvvl~  336 (339)
                      |++++
T Consensus       323 ~vv~~  327 (328)
T cd08268         323 KIVVT  327 (328)
T ss_pred             eEEEe
Confidence            88875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=1.2e-26  Score=207.19  Aligned_cols=257  Identities=22%  Similarity=0.258  Sum_probs=207.6

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++.+++||+|+...                               .              
T Consensus        26 ~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------------------~--------------   60 (293)
T cd05195          26 GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------------------P--------------   60 (293)
T ss_pred             CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------------------c--------------
Confidence            4688999999999999999999999999996531                               1              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|++|+.++.+.++++|+++++.+++.+++++.|++.++.+...++++++|+|+|+ |.+|++++++++..|+ 
T Consensus        61 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~-  134 (293)
T cd05195          61 -----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-  134 (293)
T ss_pred             -----CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999999999999998888888999999999975 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcC--CceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          179 RIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~g--a~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +++++++++++.+.++.+|  ++.+++...   .++.+.+.+.+.+ ++|++++++++.. ++.++++++++ |+++.+|
T Consensus       135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g  209 (293)
T cd05195         135 EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGEL-LRASWRCLAPF-GRFVEIG  209 (293)
T ss_pred             EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCchH-HHHHHHhcccC-ceEEEee
Confidence            8999998889999998887  677888766   6788888888877 9999999999885 99999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK  329 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~  329 (339)
                      .........+.... +.++.++....+....      ..+.+.++++++.++++.  ++.+..++++++.++++.+.++.
T Consensus       210 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~  286 (293)
T cd05195         210 KRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGK  286 (293)
T ss_pred             ccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCC
Confidence            65322111222222 3345666554322211      112467788888888765  34567899999999999998876


Q ss_pred             ee-EEEE
Q 019535          330 CL-RCVI  335 (339)
Q Consensus       330 ~~-kvvl  335 (339)
                      .. |+++
T Consensus       287 ~~~~ivv  293 (293)
T cd05195         287 HIGKVVL  293 (293)
T ss_pred             CCceecC
Confidence            65 7653

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=8.8e-28  Score=232.44  Aligned_cols=271  Identities=20%  Similarity=0.202  Sum_probs=224.4

Q ss_pred             CCCCCCCcCCCCCcccCC-CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCC
Q 019535            2 DIEKPSNKTAGKPIQCRA-VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP   80 (339)
Q Consensus         2 ~~~~~~~~~~g~~~~~~~-~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~   80 (339)
                      |||..|.+..-+..+-+. ..-.++|-||+|+          .+-|.||                              +
T Consensus      1460 DiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv------------------------------M 1499 (2376)
T KOG1202|consen 1460 DIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV------------------------------M 1499 (2376)
T ss_pred             HHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE------------------------------E
Confidence            788888777766554433 3446899999996          3459999                              4


Q ss_pred             CCCCCCcccccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-
Q 019535           81 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-  159 (339)
Q Consensus        81 g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~-  159 (339)
                      |+..-.                   ++++.+.++.+++|.+|++..+++|+..||.++|||+||+.+...++|++|||+ 
T Consensus      1500 ~mvpAk-------------------sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHa 1560 (2376)
T KOG1202|consen 1500 GMVPAK-------------------SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHA 1560 (2376)
T ss_pred             Eeeehh-------------------hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEec
Confidence            444434                   789999999999999999999999999999999999999999999999999999 


Q ss_pred             ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH
Q 019535          160 GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA  234 (339)
Q Consensus       160 G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~  234 (339)
                      |+|++|++|+.+|.++|+ +|+.++.++++++++.+    +...++-|.++   .++..-++..|+| |+|+|++....+
T Consensus      1561 GsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLaeE 1636 (2376)
T KOG1202|consen 1561 GSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAEE 1636 (2376)
T ss_pred             CCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhHH
Confidence            569999999999999999 99999999999999865    34566777777   7888899999999 999999999988


Q ss_pred             HHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCC--CCcccce
Q 019535          235 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKEL--ELDKFVT  310 (339)
Q Consensus       235 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l--~~~~~i~  310 (339)
                      . ++..++||+.. ||+..+|...-.+..++.. ..+.||.+++|..+...-.  .+++.++..++++|.-  -.+++.+
T Consensus      1637 k-LQASiRCLa~~-GRFLEIGKfDLSqNspLGM-avfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~t 1713 (2376)
T KOG1202|consen 1637 K-LQASIRCLALH-GRFLEIGKFDLSQNSPLGM-AVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPT 1713 (2376)
T ss_pred             H-HHHHHHHHHhc-CeeeeecceecccCCcchh-hhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccc
Confidence            8 99999999996 9999999765444444443 3456799999987655432  2356777777776522  3567778


Q ss_pred             eeechhhHHHHHHHHhcCcee-EEEEEeC
Q 019535          311 HEMKFEEINSAFDLLIKGKCL-RCVIWMG  338 (339)
Q Consensus       311 ~~~~l~~~~~A~~~~~~~~~~-kvvl~~~  338 (339)
                      ++|+-.++++||++|.+++.+ |+|+++.
T Consensus      1714 tvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1714 TVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred             ccccHHHHHHHHHHHhccCccceEEEEEc
Confidence            999999999999999999988 9999863

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.95  E-value=1.9e-26  Score=212.41  Aligned_cols=259  Identities=22%  Similarity=0.282  Sum_probs=196.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|+++++|++||+|+..+..                           ...             
T Consensus        71 ~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~---------------------------~~~-------------  110 (350)
T cd08248          71 IEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP---------------------------WSQ-------------  110 (350)
T ss_pred             CCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC---------------------------CCC-------------
Confidence            4678999999999999999999999999999754310                           011             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC----CCEEEEEcc-CHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~----~~~VLI~G~-G~iG~~a~~la~  173 (339)
                            |+|++|+.++++.++++|+++++++++.+++++.|||+++.+...+.+    +++|+|+|+ |++|++++++|+
T Consensus       111 ------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~  184 (350)
T cd08248         111 ------GTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLK  184 (350)
T ss_pred             ------ccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHH
Confidence                  389999999999999999999999999999999999998877777654    999999986 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .+|+ +|+++.++ ++.+.++++|++++++..+   .++.+.+...  +++|++||++|... ...++++++++ |+++.
T Consensus       185 ~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~  255 (350)
T cd08248         185 AWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVT  255 (350)
T ss_pred             HCCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEE
Confidence            9999 78888754 6777888899988888766   4555544432  38999999999885 89999999997 99999


Q ss_pred             eccCCCCCc--cccc------HHHHhhc-------CCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          254 LGVDQPGSQ--LSLS------SFEVLHS-------GKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       254 ~g~~~~~~~--~~~~------~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      +|.......  ..+.      ...+...       ...+....  .....+.+.++++++.++.+.+  .+++.|+++++
T Consensus       256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~  331 (350)
T cd08248         256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEV  331 (350)
T ss_pred             ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHH
Confidence            985421110  0110      0011110       11010000  0112345888999999997653  36789999999


Q ss_pred             HHHHHHHhcCcee-EEEEE
Q 019535          319 NSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       319 ~~A~~~~~~~~~~-kvvl~  336 (339)
                      .+|++.+.++... |++++
T Consensus       332 ~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         332 PEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHhcCCCceEEEeC
Confidence            9999999877655 77763

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=5.2e-26  Score=206.88  Aligned_cols=259  Identities=22%  Similarity=0.264  Sum_probs=208.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~   97 (339)
                      ...|.++|||++|+|+++|++++.|++||+|+....                          |+. .             
T Consensus        55 ~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------------~~~~~-------------   95 (326)
T cd08272          55 PPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG--------------------------GLGGL-------------   95 (326)
T ss_pred             CCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC--------------------------CcCCC-------------
Confidence            346889999999999999999999999999975321                          100 1             


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                            .|+|++|+.++.+.++++|+++++..++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++..|
T Consensus        96 ------~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g  169 (326)
T cd08272          96 ------QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAG  169 (326)
T ss_pred             ------CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcC
Confidence                  1389999999999999999999999999999999999998888889999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+.++++ ++.+.++++|++.+++...   . +.+.+.+++.+ ++|.++|++++.. ...++++++++ |+++.++
T Consensus       170 ~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~  241 (326)
T cd08272         170 A-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSIL  241 (326)
T ss_pred             C-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEe
Confidence            9 89999887 8888898899988888766   5 77888888877 8999999999865 88899999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCC--C--C----CCCcHHHHHHHHhCCCCCCcccce-eeechhhHHHHHHHHh
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGG--L--K----AKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLI  326 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~----~~~~~~~~~~~l~~g~l~~~~~i~-~~~~l~~~~~A~~~~~  326 (339)
                      ...   ..  .+.....+++++.+.....  .  .    ..+.+..+++++.++.+..  +++ +.|++++++++++.+.
T Consensus       242 ~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~  314 (326)
T cd08272         242 GGA---TH--DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLE  314 (326)
T ss_pred             cCC---cc--chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHH
Confidence            652   11  2222335677777654321  1  0    1234667888888886653  334 8899999999999998


Q ss_pred             cCcee-EEEEEe
Q 019535          327 KGKCL-RCVIWM  337 (339)
Q Consensus       327 ~~~~~-kvvl~~  337 (339)
                      ++... |+++++
T Consensus       315 ~~~~~~~vv~~~  326 (326)
T cd08272         315 SGSARGKIVIDV  326 (326)
T ss_pred             cCCcccEEEEEC
Confidence            77655 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.95  E-value=1.6e-25  Score=204.00  Aligned_cols=261  Identities=16%  Similarity=0.179  Sum_probs=200.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|++  ++++++++||+|+....              +          .+....              
T Consensus        56 ~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~--------------~----------~~~~~~--------------   95 (324)
T cd08288          56 TFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGW--------------G----------VGERHW--------------   95 (324)
T ss_pred             CCCCccccceEEEEEe--CCCCCCCCCCEEEECCc--------------c----------CCCCCC--------------
Confidence            4688999999999999  77788999999975321              0          110112              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--HhcCCC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~~~~~~-~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                           |+|++|+.++.+.++++|+++++++++.+++++++++.++.  +..+.. .+++|||+|+ |++|++++|+|+.+
T Consensus        96 -----g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~  170 (324)
T cd08288          96 -----GGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARL  170 (324)
T ss_pred             -----CcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHC
Confidence                 38999999999999999999999999999999999987643  123444 5689999987 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+ +|++++.++++.+.++++|+++++++++   .  ...+..+..+++|.+||++++.. ...++..++.+ |+++.+|
T Consensus       171 G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G  242 (324)
T cd08288         171 GY-EVVASTGRPEEADYLRSLGASEIIDRAE---L--SEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACG  242 (324)
T ss_pred             CC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---h--hHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEE
Confidence            99 8999988999999999999999988765   2  22455555557899999999855 77888889997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      .... .....++..++.++.++.+........   .+.+..+.+++.++.+.+   +.+.++++++++|++.+.+++.. 
T Consensus       243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~  318 (324)
T cd08288         243 LAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRG  318 (324)
T ss_pred             ecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccC
Confidence            7532 222344445556789988865332211   123556677777886643   35899999999999999888776 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+++.+
T Consensus       319 ~vvv~~  324 (324)
T cd08288         319 RVVVDV  324 (324)
T ss_pred             eEEEeC
Confidence            888763

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.95  E-value=1.5e-25  Score=206.83  Aligned_cols=264  Identities=18%  Similarity=0.196  Sum_probs=194.3

Q ss_pred             CCcccCCceeEEEEEecCCCC-CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           21 FPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .|.++|||++|+|+++|++++ .|++||+|+......|                       +  .               
T Consensus        58 ~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~-----------------------~--~---------------   97 (352)
T cd08247          58 KEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPY-----------------------G--G---------------   97 (352)
T ss_pred             CCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCC-----------------------C--C---------------
Confidence            488999999999999999998 8999999975432100                       0  1               


Q ss_pred             cccccccccceEEeecc----ceEEcCCCCCccccccccchhhhhhHHHHHhc-CCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~-~~~~~~~VLI~G~-G~iG~~a~~la~  173 (339)
                          .|+|++|++++..    .++++|+++++++++.+++++.|||+++.+.. +++++++|+|+|+ |.+|++++++|+
T Consensus        98 ----~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~  173 (352)
T cd08247          98 ----QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK  173 (352)
T ss_pred             ----CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence                1389999999987    79999999999999999999999999887766 7999999999987 799999999999


Q ss_pred             HcCC-CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc---HHHHHHHh-cCC-CccEEEEcCCCHHHHHHHHHHhh--
Q 019535          174 LCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS---VSQIIIDM-TDG-GADYCFECVGLASLVQEAYACCR--  245 (339)
Q Consensus       174 ~~G~-~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~---~~~~l~~~-~~g-~~d~v~d~~g~~~~~~~~~~~l~--  245 (339)
                      .+|. +.++++. ++++.+.++++|++.+++.++   .+   +...+.+. +++ ++|++|||+|+......++++++  
T Consensus       174 ~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~  249 (352)
T cd08247         174 NHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPK  249 (352)
T ss_pred             hcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCcc
Confidence            9854 3567766 455566788899988988766   34   44444444 424 99999999998665889999999  


Q ss_pred             -cCCcEEEEeccCCCCC--ccc--------ccHHHHh----hcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccce
Q 019535          246 -KGWGKTIVLGVDQPGS--QLS--------LSSFEVL----HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT  310 (339)
Q Consensus       246 -~~~G~~v~~g~~~~~~--~~~--------~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~  310 (339)
                       ++ |+++.++......  ...        .....+.    .+...+.....  ....+.+.++++++.++.+.+  +++
T Consensus       250 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~--~~~  324 (352)
T cd08247         250 SKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL--DPNADWIEKCAELIADGKVKP--PID  324 (352)
T ss_pred             CCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe--cCCHHHHHHHHHHHhCCCeEe--eec
Confidence             97 9999875322110  000        0111111    11222221110  111234777889998987653  356


Q ss_pred             eeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535          311 HEMKFEEINSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       311 ~~~~l~~~~~A~~~~~~~~~~-kvvl~~  337 (339)
                      ++++++++++|++.++++... |+++++
T Consensus       325 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         325 SVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             cEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            899999999999999887765 888753

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=9.7e-26  Score=205.21  Aligned_cols=257  Identities=25%  Similarity=0.349  Sum_probs=202.7

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      +|.++|||++|+|+.+|++++.+++||+|+....                           +...               
T Consensus        56 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~---------------------------~~~~---------------   93 (325)
T cd08271          56 YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS---------------------------LARG---------------   93 (325)
T ss_pred             CCcccccceEEEEEEeCCCCCcCCCCCEEEeccC---------------------------CCCC---------------
Confidence            4789999999999999999999999999975421                           0112               


Q ss_pred             ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535          101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR  179 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~  179 (339)
                          |+|++|+.++.+.++++|++++..+++.+++++.+|++++.+..++.++++|+|+|+ |.+|++++++++..|+ +
T Consensus        94 ----~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~  168 (325)
T cd08271          94 ----GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R  168 (325)
T ss_pred             ----ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence                289999999999999999999999999999999999998888888999999999997 7999999999999999 7


Q ss_pred             EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++. ++++.+.++.+|++.+++...   ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.++...
T Consensus       169 v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~  242 (325)
T cd08271         169 VITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRP  242 (325)
T ss_pred             EEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCC
Confidence            88877 677888888899988888776   6677888888777 8999999999877 66789999997 9999997543


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCC----------CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGL----------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      ...    ... .+.+++.+....+...          ..++.+.++++++.++.+.+.  ..+.|+++++.++++.+.++
T Consensus       243 ~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~  315 (325)
T cd08271         243 DAS----PDP-PFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDR  315 (325)
T ss_pred             CCc----chh-HHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcC
Confidence            211    111 1223334333221111          111235678888888876543  45889999999999999877


Q ss_pred             cee-EEEEEe
Q 019535          329 KCL-RCVIWM  337 (339)
Q Consensus       329 ~~~-kvvl~~  337 (339)
                      ... |+++++
T Consensus       316 ~~~~kiv~~~  325 (325)
T cd08271         316 HTRGKIVVTI  325 (325)
T ss_pred             CccceEEEEC
Confidence            665 888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.95  E-value=3e-25  Score=201.40  Aligned_cols=258  Identities=24%  Similarity=0.389  Sum_probs=211.2

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|||++|+|+.+|++++.+++||+|+..+.                              .              
T Consensus        56 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~------------------------------~--------------   91 (323)
T cd08241          56 PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG------------------------------Q--------------   91 (323)
T ss_pred             CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC------------------------------C--------------
Confidence            34778999999999999999999999999975320                              1              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |++++|+.++.+.++++|+++++.+++.+.+++.+|+.++.+...+.++++|+|+|+ |.+|++++++++..|+ 
T Consensus        92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-  165 (323)
T cd08241          92 -----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-  165 (323)
T ss_pred             -----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-
Confidence                 289999999999999999999999988888899999998777788999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|++++.++++.+.++++|+..+++...   .++.+.+.+.+.+ ++|.+++++|+.. +..++++++++ |+++.+|..
T Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~  240 (323)
T cd08241         166 RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFA  240 (323)
T ss_pred             EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccC
Confidence            8999999999999998899888888776   6788888888877 8999999999855 88999999997 999999864


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCC------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      .... ..+.....+.+++++.+........      .+.+.++++++.++.+.+  +.++.|+++++.++++.+.++...
T Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  317 (323)
T cd08241         241 SGEI-PQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKAT  317 (323)
T ss_pred             CCCc-CcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCC
Confidence            3211 1133334556788888875443221      134677888898887643  366889999999999988877655


Q ss_pred             -EEEE
Q 019535          332 -RCVI  335 (339)
Q Consensus       332 -kvvl  335 (339)
                       |+++
T Consensus       318 ~~vvv  322 (323)
T cd08241         318 GKVVL  322 (323)
T ss_pred             CcEEe
Confidence             7775

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=6.6e-26  Score=207.15  Aligned_cols=255  Identities=25%  Similarity=0.310  Sum_probs=196.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+.+|++++.|++||+|.....                              .              
T Consensus        56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~------------------------------~--------------   91 (331)
T cd08273          56 PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR------------------------------V--------------   91 (331)
T ss_pred             CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC------------------------------C--------------
Confidence            57889999999999999999999999999965321                              1              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++|+|+|+ |.+|++++++|+..|+ 
T Consensus        92 -----g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-  165 (331)
T cd08273          92 -----GGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-  165 (331)
T ss_pred             -----cceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence                 289999999999999999999999999999999999998877788999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+.++. +++.+.++++|+.. ++...   .++.+.  +...+++|++|+|+++.. ...++++++.+ |+++.+|...
T Consensus       166 ~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~  236 (331)
T cd08273         166 EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNS  236 (331)
T ss_pred             EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCC
Confidence            8999987 88888888899754 44443   344333  333348999999999888 88999999997 9999998653


Q ss_pred             CCCcccccH--------------HHHhhcCCeEEeeecCCC----CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHH
Q 019535          259 PGSQLSLSS--------------FEVLHSGKILMGSLFGGL----KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS  320 (339)
Q Consensus       259 ~~~~~~~~~--------------~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~  320 (339)
                      ......+.+              .....++.++.+......    ...+.+.++++++.++.+.+  .+.++++++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~  314 (331)
T cd08273         237 SLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAE  314 (331)
T ss_pred             CCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHH
Confidence            222211111              011122233322221100    01235778889999997754  3668899999999


Q ss_pred             HHHHHhcCcee-EEEE
Q 019535          321 AFDLLIKGKCL-RCVI  335 (339)
Q Consensus       321 A~~~~~~~~~~-kvvl  335 (339)
                      +++.+.++... |+|+
T Consensus       315 a~~~~~~~~~~gkvv~  330 (331)
T cd08273         315 AHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHcCCCcceEEe
Confidence            99998877665 7765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=6.1e-25  Score=200.97  Aligned_cols=261  Identities=21%  Similarity=0.320  Sum_probs=206.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      +.+|.++|||++|+|+.+|++++++++||+|+....                              +             
T Consensus        54 ~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~------------------------------~-------------   90 (337)
T cd08275          54 PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR------------------------------F-------------   90 (337)
T ss_pred             CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC------------------------------C-------------
Confidence            356889999999999999999999999999975321                              1             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc-C
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-G  176 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~-G  176 (339)
                            |+|++|+.++.+.++++|+++++++++.+++++.++|+++....+++++++|+|+|+ |.+|++++++|+.. +
T Consensus        91 ------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~  164 (337)
T cd08275          91 ------GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN  164 (337)
T ss_pred             ------CeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccC
Confidence                  289999999999999999999999999999999999998888888999999999987 99999999999999 4


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      . .++... .+++.++++.+|++.+++...   .++.+.+.+.+.+++|+++||+|+.. ...++++++++ |+++.+|.
T Consensus       165 ~-~~~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~  237 (337)
T cd08275         165 V-TVVGTA-SASKHEALKENGVTHVIDYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGA  237 (337)
T ss_pred             c-EEEEeC-CHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEee
Confidence            3 333332 355778888899888888776   67888888877558999999999876 88999999997 99999986


Q ss_pred             CCCCC--c-------------ccccHHHHhhcCCeEEeeecCCCCCC-----CcHHHHHHHHhCCCCCCcccceeeechh
Q 019535          257 DQPGS--Q-------------LSLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFE  316 (339)
Q Consensus       257 ~~~~~--~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~  316 (339)
                      .....  .             ..+....++.++.++.+.........     ..+.++++++.++.+.+.  .++.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  315 (337)
T cd08275         238 ANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFE  315 (337)
T ss_pred             cCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHH
Confidence            43211  1             11222345677888887764322111     135678888888876543  56889999


Q ss_pred             hHHHHHHHHhcCcee-EEEEEe
Q 019535          317 EINSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       317 ~~~~A~~~~~~~~~~-kvvl~~  337 (339)
                      +++++++.+.++... |+++++
T Consensus       316 ~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         316 EVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHcCCCcceEEEeC
Confidence            999999999887665 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.94  E-value=3.6e-25  Score=199.75  Aligned_cols=250  Identities=21%  Similarity=0.297  Sum_probs=199.1

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+.+|+++..+++||+|+..+..                           ...            
T Consensus        56 ~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~---------------------------~~~------------   96 (309)
T cd05289          56 PLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF---------------------------TRG------------   96 (309)
T ss_pred             CCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC---------------------------CCC------------
Confidence            34568999999999999999999999999999754310                           011            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|++|+.++.+.++++|+++++..++.+++.+.++++++.....+.++++|+|+|+ |.+|++++++++..|
T Consensus        97 -------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g  169 (309)
T cd05289          97 -------GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARG  169 (309)
T ss_pred             -------CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence                   389999999999999999999999999999999999998877777899999999987 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|++++.++ +.+.++++|..++++...   .++.+    .+.+ ++|++|+++++.. ...++++++++ |+++.+|
T Consensus       170 ~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g  238 (309)
T cd05289         170 A-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIA  238 (309)
T ss_pred             C-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEc
Confidence            9 888888766 788888899888887665   34333    3344 8999999999885 89999999997 9999998


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      .....  ..    ....++.++........  .+.+..+++++.++.+.  .++++.|++++++++++.+.++... |++
T Consensus       239 ~~~~~--~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         239 GPPPA--EQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             CCCcc--hh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            64321  11    22344566555443221  35688899999888654  3467899999999999998877655 665

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=5.9e-25  Score=199.53  Aligned_cols=255  Identities=23%  Similarity=0.277  Sum_probs=192.7

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++++++++||+|+.....                           ...              
T Consensus        57 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------------------------~~~--------------   95 (319)
T cd08267          57 PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP---------------------------KGG--------------   95 (319)
T ss_pred             CCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC---------------------------CCC--------------
Confidence            467899999999999999999999999999754320                           011              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++|+|+|+ |++|++++++|+..|+ 
T Consensus        96 -----g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-  169 (319)
T cd08267          96 -----GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-  169 (319)
T ss_pred             -----ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999999999999998877777999999999997 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|++++++ ++.+.++++|+.++++...   .++.   ...+.+ ++|++++|+++. ......+..++++ |+++.+|.
T Consensus       170 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~  241 (319)
T cd08267         170 HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGG  241 (319)
T ss_pred             EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEecc
Confidence            89988865 8888888999888887665   3333   344455 899999999853 2233444459997 99999986


Q ss_pred             CCCCCcccc---cHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          257 DQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       257 ~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      .........   ....... ...+.......  ..+.+.++++++.++.+.+  +++++|+++++++|++.+.++... |
T Consensus       242 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~  316 (319)
T cd08267         242 GPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGK  316 (319)
T ss_pred             ccccccccccccchhhccc-cceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCc
Confidence            532221111   1111111 12222221111  1456888999999887653  467899999999999999877655 6


Q ss_pred             EE
Q 019535          333 CV  334 (339)
Q Consensus       333 vv  334 (339)
                      ++
T Consensus       317 vv  318 (319)
T cd08267         317 VV  318 (319)
T ss_pred             Ee
Confidence            65

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=1.2e-23  Score=179.07  Aligned_cols=250  Identities=20%  Similarity=0.234  Sum_probs=198.0

Q ss_pred             ceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccccccc
Q 019535           28 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF  107 (339)
Q Consensus        28 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~  107 (339)
                      ..+|+|++.+  -+++++||.|+...                                                    +|
T Consensus        78 ~GV~kVi~S~--~~~~~~GD~v~g~~----------------------------------------------------gW  103 (343)
T KOG1196|consen   78 FGVAKVIDSG--HPNYKKGDLVWGIV----------------------------------------------------GW  103 (343)
T ss_pred             CceEEEEecC--CCCCCcCceEEEec----------------------------------------------------cc
Confidence            7889999964  46899999995422                                                    79


Q ss_pred             cceEEeecc--ceEEcCC--CCCccc-cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEE
Q 019535          108 SEYTVLDIA--HVVKVDP--TVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRII  181 (339)
Q Consensus       108 ~~~~~~~~~--~~~~lp~--~~~~~~-aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi  181 (339)
                      .||.+++..  ..++++.  ++++.- ..++.++..|||....+....+.+++|+|-|| |++|+++.|+|+.+|+ +|+
T Consensus       104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VV  182 (343)
T KOG1196|consen  104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVV  182 (343)
T ss_pred             eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEE
Confidence            999999764  4555554  344333 23477899999999999999999999999987 9999999999999999 999


Q ss_pred             EEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC--
Q 019535          182 GVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ--  258 (339)
Q Consensus       182 ~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~--  258 (339)
                      +.+.++++.+.++. +|.+..+|+.+  ..+..+.+++....++|+-||.+|+.. ++..+..|+.. ||++.+|...  
T Consensus       183 GsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqY  258 (343)
T KOG1196|consen  183 GSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQY  258 (343)
T ss_pred             EecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhc
Confidence            99999999999865 79999999998  238888998887779999999999999 99999999996 9999999643  


Q ss_pred             --CCCcccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          259 --PGSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       259 --~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                        ..++.--++..++.|++.+.|+......+  .+-+..+..++++|+|....-+  .-+|+..++|+.-|.++.+. |.
T Consensus       259 N~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKq  336 (343)
T KOG1196|consen  259 NLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQ  336 (343)
T ss_pred             cccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccce
Confidence              11111223345667888888875433221  1234678888999999776433  33699999999999999887 99


Q ss_pred             EEEeC
Q 019535          334 VIWMG  338 (339)
Q Consensus       334 vl~~~  338 (339)
                      ++++.
T Consensus       337 iv~va  341 (343)
T KOG1196|consen  337 LVKVA  341 (343)
T ss_pred             EEEee
Confidence            98874

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.77  E-value=8.4e-18  Score=132.52  Aligned_cols=128  Identities=28%  Similarity=0.491  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHH
Q 019535          163 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY  241 (339)
Q Consensus       163 ~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~  241 (339)
                      ++|++++|+|+..|+ +|+++++++++++.++++|+++++++++   .++.+++++++++ ++|+||||+|+...++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            589999999999997 9999999999999999999999999998   7899999999998 9999999999888899999


Q ss_pred             HHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHh
Q 019535          242 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM  299 (339)
Q Consensus       242 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~  299 (339)
                      ++++++ |+++.+|... .....++...++.+++++.+++.+.   .++++++++++.
T Consensus        77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la  129 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA  129 (130)
T ss_dssp             HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred             HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence            999997 9999999875 5678889999999999999997655   467888888765

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.69  E-value=3.2e-17  Score=125.02  Aligned_cols=84  Identities=37%  Similarity=0.549  Sum_probs=74.4

Q ss_pred             ccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535           16 QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        16 ~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~   95 (339)
                      .....+|.++|||++|+|+++|+++++|++||+|+..+...|+.|.+|..+.+++|.....   +|+..+|         
T Consensus        26 ~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~---~g~~~~G---------   93 (109)
T PF08240_consen   26 PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEV---LGLGLDG---------   93 (109)
T ss_dssp             SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEE---TTTSSTC---------
T ss_pred             ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCE---eEcCCCC---------
Confidence            4566899999999999999999999999999999998888899999999999999987764   6766666         


Q ss_pred             ceeecccccccccceEEeeccceEEc
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKV  121 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~l  121 (339)
                                +|+||+++++++++|+
T Consensus        94 ----------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   94 ----------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             ----------SSBSEEEEEGGGEEEE
T ss_pred             ----------cccCeEEEehHHEEEC
Confidence                      9999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.50  E-value=1.1e-12  Score=121.22  Aligned_cols=176  Identities=14%  Similarity=0.167  Sum_probs=137.7

Q ss_pred             hHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh
Q 019535          141 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       141 ~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.++.+..++ .+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.+.+.++.+|+..+ +        ..+.+   
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v---  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV---  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence            4445554443 579999999999999999999999999 89999999999999999998432 1        11222   


Q ss_pred             cCCCccEEEEcCCCHHHHHHH-HHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHH--HHHH
Q 019535          220 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK  296 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~  296 (339)
                        .++|+||+|+|....+... ++.++++ |+++.+|..    ...++...+..+++++.+++....  ..++.  ..+.
T Consensus       256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~  326 (413)
T cd00401         256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII  326 (413)
T ss_pred             --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence              2589999999998878765 9999997 999999854    245777778888898888754321  11345  6899


Q ss_pred             HHhCCCC-CCcccceee-----echh-hHHHHHHHHhcCce--eEEEEEeC
Q 019535          297 RYMDKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKC--LRCVIWMG  338 (339)
Q Consensus       297 ~l~~g~l-~~~~~i~~~-----~~l~-~~~~A~~~~~~~~~--~kvvl~~~  338 (339)
                      ++.+|++ ++...++|.     ++++ ++.+++..+.++..  .|+++.+.
T Consensus       327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            9999998 888888999     9999 99999999987654  37777653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.37  E-value=1.3e-11  Score=116.93  Aligned_cols=155  Identities=20%  Similarity=0.260  Sum_probs=114.5

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCC----------CccHHHHHHH
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~----------~~~~~~~l~~  218 (339)
                      ..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+..          ..++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4579999999999999999999999999 89999999999999999999854 5543300          0133333333


Q ss_pred             h-cC--CCccEEEEcCCC-----HHH-HHHHHHHhhcCCcEEEEeccCCCCC-cccccHHHHhh-cCCeEEeeecCCCCC
Q 019535          219 M-TD--GGADYCFECVGL-----ASL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLH-SGKILMGSLFGGLKA  287 (339)
Q Consensus       219 ~-~~--g~~d~v~d~~g~-----~~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~  287 (339)
                      . .+  +++|++|+|++.     +.. .+.+++.++++ |++++++...++. ..+.+...++. +++++.+...  ++ 
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P-  316 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP-  316 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence            3 33  379999999986     334 49999999998 9999999754332 34444455665 7899888752  22 


Q ss_pred             CCcHH-HHHHHHhCCCCCCcccce
Q 019535          288 KSDIP-ILLKRYMDKELELDKFVT  310 (339)
Q Consensus       288 ~~~~~-~~~~~l~~g~l~~~~~i~  310 (339)
                       ..+. ...+++.++.+++..+++
T Consensus       317 -~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 -SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             -hhHHHHHHHHHHhCCccHHHHhc
Confidence             2444 589999999887766665

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.29  E-value=1.3e-12  Score=102.34  Aligned_cols=120  Identities=21%  Similarity=0.321  Sum_probs=77.7

Q ss_pred             cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC--CHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhc
Q 019535          196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  273 (339)
Q Consensus       196 ~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  273 (339)
                      |||++++|+++   .++      ...+++|+|||++|  ....+..++++| ++ |+++.++.       .........+
T Consensus         1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence            68999999987   665      22349999999999  666447777888 97 99999973       1111111122


Q ss_pred             CCeEEeeecCC-CC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          274 GKILMGSLFGG-LK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       274 ~~~i~~~~~~~-~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ...+....+.. .+   ..+.++++.+++.+|++++.  +.++||++++.+|++.+++++.. |+||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            23333332221 11   23458999999999987765  88999999999999999999887 9986

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.62  E-value=2.2e-07  Score=82.58  Aligned_cols=163  Identities=21%  Similarity=0.328  Sum_probs=100.2

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++.    +...+ ....   .++.+ + .+..
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~---~d~~~-l-~~~~  144 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRL---GEIEA-L-PVAD  144 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEE---cchhh-C-CCCC
Confidence            35688999999999987 88888888887753 799999999998888763    33222 1111   12211 1 1223


Q ss_pred             CCccEEEE-cC-----CCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHH
Q 019535          222 GGADYCFE-CV-----GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL  295 (339)
Q Consensus       222 g~~d~v~d-~~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  295 (339)
                      +.||+|+. ++     .....++++.+.|+++ |+++..+..... ...    ....+...+.+......   ....++.
T Consensus       145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~~----~~~~~~~~~~~~~~~~~---~~~~e~~  215 (272)
T PRK11873        145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-ELP----EEIRNDAELYAGCVAGA---LQEEEYL  215 (272)
T ss_pred             CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CCC----HHHHHhHHHHhccccCC---CCHHHHH
Confidence            37999984 32     3345699999999998 999998764322 111    11111222221111111   2345566


Q ss_pred             HHHhC-CCCCCcccceeeechhhHHHHHHHH
Q 019535          296 KRYMD-KELELDKFVTHEMKFEEINSAFDLL  325 (339)
Q Consensus       296 ~~l~~-g~l~~~~~i~~~~~l~~~~~A~~~~  325 (339)
                      +++++ |...........++++++.++++.+
T Consensus       216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~  246 (272)
T PRK11873        216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW  246 (272)
T ss_pred             HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence            66655 4433433345668889999999888

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.54  E-value=8.5e-07  Score=84.24  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=81.6

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCC----------CCCccHHHHHHHh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKN----------CGDKSVSQIIIDM  219 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~----------~~~~~~~~~l~~~  219 (339)
                      .++.+|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+          .-.+++.+..+++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            357899999999999999999999999 89999999999999999998653 22211          0012333333333


Q ss_pred             cC---CCccEEEEcC---CCHH---HHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          220 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       220 ~~---g~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      ..   .++|++|+|+   |.+.   ..++.++.++++ +.+|+++...++
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG  289 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG  289 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence            32   2799999999   5433   578889999998 999999876654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.45  E-value=1.7e-08  Score=94.85  Aligned_cols=161  Identities=17%  Similarity=0.185  Sum_probs=106.1

Q ss_pred             cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535           23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  102 (339)
Q Consensus        23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  102 (339)
                      ..-|.|+++.+.+|++++++     +|+.-+.. ||.|..|    ++.|.....   .|...++                
T Consensus        88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------  138 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------  138 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH----------------
Confidence            45788999999999998876     55555666 9999999    555654443   4444444                


Q ss_pred             ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHH---HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~a---l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                         .|++++.+++ .+.. .-.++       ..+.+.++.|   ..+..+...+.+|+|+|+|.+|..+++.++..|+.+
T Consensus       139 ---lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       139 ---LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             ---HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence               8999988876 3332 00111       1122222222   223334457899999999999999999999999668


Q ss_pred             EEEEcCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535          180 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       180 Vi~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      |+++.++.++.+ +++.+|.. .++.     .++.+.+.     ++|+||+|++.+.
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~  252 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPH  252 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCC
Confidence            999999887754 55667753 2221     12222221     5899999998754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.33  E-value=1.1e-05  Score=72.40  Aligned_cols=96  Identities=21%  Similarity=0.317  Sum_probs=76.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+++|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++.+|+..+ ..     .++.+.+     ..+|+||+|+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l-----~~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV-----GKIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh-----CCCCEEEECC
Confidence            58999999999999999999999999 99999999888888888886532 11     1222222     2589999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      +.....+..++.++++ +.+++++..+++
T Consensus       219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg  246 (296)
T PRK08306        219 PALVLTKEVLSKMPPE-ALIIDLASKPGG  246 (296)
T ss_pred             ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence            8776567888899997 999999876544

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.27  E-value=1.7e-05  Score=74.10  Aligned_cols=103  Identities=21%  Similarity=0.233  Sum_probs=77.8

Q ss_pred             hhHHHHHhcCCC-CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHH
Q 019535          140 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       140 a~~al~~~~~~~-~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +|.++....++. .+++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +.        ++.+.+  
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal--  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA--  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence            344444443544 79999999999999999999999999 899999988877666666654 22        122222  


Q ss_pred             hcCCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccCC
Q 019535          219 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  258 (339)
                         .++|++|+++|....+. ..+..++++ +.++..|...
T Consensus       266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence               25899999999887665 688889997 8888888654

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.23  E-value=3.9e-05  Score=67.30  Aligned_cols=131  Identities=21%  Similarity=0.213  Sum_probs=83.6

Q ss_pred             cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      +|.+|.. +...++.+++.+++..+. .+.... ....+..  .+.++.+||.+|+|. |..++.++ ..|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~-~~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLDVGCGS-GILAIAAA-KLGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEEEC
Confidence            4555644 667889999988877654 221111 1111211  256789999999986 87777654 467757999999


Q ss_pred             ChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535          186 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       186 ~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++...+.+++.    +....+....   .+          ..||+|+......   ..++.+.+.|+++ |.+++.|..
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~~~~---~~----------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~  215 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVYLPQ---GD----------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL  215 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEcc---CC----------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence            99988877653    2211111111   00          0589998655433   2366788899998 999988754

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.17  E-value=6e-06  Score=74.72  Aligned_cols=108  Identities=20%  Similarity=0.248  Sum_probs=79.1

Q ss_pred             ceEEcCCCCCccccccccchhhhhhHHHHHhcCC---CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH-HH
Q 019535          117 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-EI  192 (339)
Q Consensus       117 ~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~---~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~  192 (339)
                      ..+++|+.++.+.++... +.+++++++......   .++.+|+|+|+|.+|+.+++.++..|..+|+++++++++. ++
T Consensus       140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            667888999888887766 677777764332221   3689999999999999999999988876899999988765 56


Q ss_pred             HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHH
Q 019535          193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL  236 (339)
Q Consensus       193 ~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~  236 (339)
                      ++++|+. +++.     +++.+.+.     .+|+||.|++.+..
T Consensus       219 a~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence            6778863 3322     12222221     48999999998774

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.17  E-value=6.4e-08  Score=91.27  Aligned_cols=161  Identities=18%  Similarity=0.168  Sum_probs=98.3

Q ss_pred             cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535           23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  102 (339)
Q Consensus        23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  102 (339)
                      ..-|||+++.+.+|++++++.-+|..-     . ||.|..    -++.|.....   .|...++                
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQvk~----a~~~a~~~g~---~g~~l~~----------------  140 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQVKD----AYALAQEAGT---VGTILNR----------------  140 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChH-----H-HHHHHH----HHHHHHHcCC---chHHHHH----------------
Confidence            457999999999999998775555533     2 444442    1222222221   2211222                


Q ss_pred             ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC---CCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535          103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATR  179 (339)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~---~~~~~~VLI~G~G~iG~~a~~la~~~G~~~  179 (339)
                         .|++.+.++        +.+..+.+.. ..+.+.+++++.....   ...+.+|+|+|+|.+|.++++.++..|+++
T Consensus       141 ---lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~  208 (423)
T PRK00045        141 ---LFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRK  208 (423)
T ss_pred             ---HHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCe
Confidence               566554443        3333222222 2255666665433222   256789999999999999999999999878


Q ss_pred             EEEEcCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535          180 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       180 Vi~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      |+++.+++++.+ +++.+|.. +++..     ++.+.+     .++|+||+|++.+.
T Consensus       209 V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l-----~~aDvVI~aT~s~~  254 (423)
T PRK00045        209 ITVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL-----AEADIVISSTGAPH  254 (423)
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh-----ccCCEEEECCCCCC
Confidence            999999887755 56667753 33221     222222     25899999998754

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.16  E-value=3.4e-05  Score=71.59  Aligned_cols=100  Identities=23%  Similarity=0.281  Sum_probs=76.3

Q ss_pred             HHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          142 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       142 ~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .++.+..+ ...+++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.        +..+.+    
T Consensus       183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~--------~leeal----  248 (406)
T TIGR00936       183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM--------TMEEAA----  248 (406)
T ss_pred             HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC--------CHHHHH----
Confidence            33444434 3579999999999999999999999999 899999888877666666752 22        122222    


Q ss_pred             CCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccC
Q 019535          221 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~  257 (339)
                       .+.|++|+++|....+. ..+..++++ +.++.+|..
T Consensus       249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~  284 (406)
T TIGR00936       249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF  284 (406)
T ss_pred             -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence             24799999999988776 488899997 888888765

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.07  E-value=5.2e-05  Score=71.12  Aligned_cols=101  Identities=18%  Similarity=0.231  Sum_probs=77.8

Q ss_pred             hHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh
Q 019535          141 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       141 ~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. +        ++.+.+.  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~--  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS--  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh--
Confidence            3445454444 568999999999999999999999999 8999998887766666667642 2        1222222  


Q ss_pred             cCCCccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~  257 (339)
                         ..|++|.+.|+... ....++.|+++ +.++.+|..
T Consensus       309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence               37999999998764 48899999997 999999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.04  E-value=4.5e-05  Score=68.04  Aligned_cols=96  Identities=19%  Similarity=0.256  Sum_probs=71.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+++++|+|.|.+|+++++.++.+|+ +|++..+++++.+.+..+|... +..     .++.+.+     ..+|+||+++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDiVint~  217 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLEEKV-----AEIDIVINTI  217 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHh-----ccCCEEEECC
Confidence            47899999999999999999999999 9999999888777776666432 211     1222222     2589999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      +....-...++.++++ ..++.++..+++
T Consensus       218 P~~ii~~~~l~~~k~~-aliIDlas~Pg~  245 (287)
T TIGR02853       218 PALVLTADVLSKLPKH-AVIIDLASKPGG  245 (287)
T ss_pred             ChHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence            8665345677788886 888888875433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.03  E-value=4.1e-05  Score=63.96  Aligned_cols=115  Identities=17%  Similarity=0.210  Sum_probs=83.3

Q ss_pred             ccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEEeC
Q 019535          129 RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNS  204 (339)
Q Consensus       129 ~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~  204 (339)
                      ..-.+.-+...|.  +.+.+.++++++||-+|+|. |..++-+|+..|  +|+.+.+.++-.+.+    +.+|...|...
T Consensus        51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~  125 (209)
T COG2518          51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVR  125 (209)
T ss_pred             CCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence            3334444555554  56888999999999999874 999999999998  799999988755554    45776443322


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          205 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..   +.    .+-+... +||.|+-+.+.+..-+.+++.|+++ |+++..-.
T Consensus       126 ~g---DG----~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG  170 (209)
T COG2518         126 HG---DG----SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG  170 (209)
T ss_pred             EC---Cc----ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence            22   11    1233344 8999998888777668899999998 99988644

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.89  E-value=0.0001  Score=68.27  Aligned_cols=100  Identities=23%  Similarity=0.231  Sum_probs=70.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+      .+.+.+.. ..+|++|+|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l-~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAV-KRADLLIGA  237 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHH-ccCCEEEEc
Confidence            35679999999999999999999999 89999998888777654 55432222221      11222222 258999999


Q ss_pred             CC---C--HH-HHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          231 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       231 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      ++   .  +. ..+..++.++++ +.+++++...++
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG  272 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG  272 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC
Confidence            73   2  21 246788889997 999999876544

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.79  E-value=0.00029  Score=70.90  Aligned_cols=137  Identities=19%  Similarity=0.252  Sum_probs=86.3

Q ss_pred             cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 019535          106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  184 (339)
Q Consensus       106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~  184 (339)
                      ++++|..+++..++.+ +.++.+++..-..+          ..+...++++||+|+ |.+|+.+++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5667777777777766 55665655421100          112235789999986 9999999999999999 899999


Q ss_pred             CChhHHHHHHh-cCC-----ceEEeCCCCCCccHHHHHHHhc--CCCccEEEEcCCC-----------------------
Q 019535          185 VISEKFEIGKR-FGV-----TEFVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL-----------------------  233 (339)
Q Consensus       185 ~~~~~~~~~~~-~ga-----~~vi~~~~~~~~~~~~~l~~~~--~g~~d~v~d~~g~-----------------------  233 (339)
                      +++++.+.+.. ++.     ....|..+  ...+.+.+.+..  .+++|++|+++|.                       
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            98877655433 332     11234333  122323333322  2479999999982                       


Q ss_pred             --HHHHHHHHHHhhc---CCcEEEEeccC
Q 019535          234 --ASLVQEAYACCRK---GWGKTIVLGVD  257 (339)
Q Consensus       234 --~~~~~~~~~~l~~---~~G~~v~~g~~  257 (339)
                        ...++.+++.+..   + |+++.++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence              1224455666655   5 789998864

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.76  E-value=0.00025  Score=63.56  Aligned_cols=97  Identities=20%  Similarity=0.249  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~-~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++.    +.. .+.....    +    ......++|
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f  226 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA  226 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence            45789999999986 777776665 5766999999999888777652    221 1111111    1    111223479


Q ss_pred             cEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+|+......   ..++.+.+.|+++ |.++..|..
T Consensus       227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            9999654333   3467788999998 999888754

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=0.00021  Score=56.35  Aligned_cols=75  Identities=24%  Similarity=0.284  Sum_probs=55.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      -.+.+++|+|+|++|++++..+...|+++|+.+.|+.++.+.+ +.++..  .++..++     +.+.+.     .+|+|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Div   79 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIV   79 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeE
Confidence            3588999999999999999999999998899999998887666 445322  3444443     222222     48999


Q ss_pred             EEcCCCHH
Q 019535          228 FECVGLAS  235 (339)
Q Consensus       228 ~d~~g~~~  235 (339)
                      |+|++.+.
T Consensus        80 I~aT~~~~   87 (135)
T PF01488_consen   80 INATPSGM   87 (135)
T ss_dssp             EE-SSTTS
T ss_pred             EEecCCCC
Confidence            99988753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.69  E-value=0.00074  Score=55.28  Aligned_cols=104  Identities=20%  Similarity=0.307  Sum_probs=73.2

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..+++++++.++-+|+|. |..++++++..-..+|++++++++..+..+    +||.+.+.-...    +..+.+..+. 
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~-  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP-  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence            456789999988889863 788888886555559999999999887764    478764432222    2222232221 


Q ss_pred             CCccEEEEcCCC--HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          222 GGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 g~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       .+|.+|---|.  ...++.+|+.|+++ |++|.-...
T Consensus       102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait  137 (187)
T COG2242         102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT  137 (187)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence             59999954443  45689999999998 999887654

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.66  E-value=3.9e-05  Score=75.40  Aligned_cols=80  Identities=19%  Similarity=0.271  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhHHHHHHhcCCceEEeCCCC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC  207 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~---------------------~~~~~~~~~~ga~~vi~~~~~  207 (339)
                      ....+++|+|+|+|++|+++++.++..|+ +|++++..                     ..+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            36789999999999999999999999999 78888742                     34566778899876665432 


Q ss_pred             CCccH-HHHHHHhcCCCccEEEEcCCCHH
Q 019535          208 GDKSV-SQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       208 ~~~~~-~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                       ..+. .+.+    ..++|+||+++|...
T Consensus       211 -~~~~~~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 -GEDITLEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             -CCcCCHHHH----HhhCCEEEEeeCCCC
Confidence             0111 1222    126999999999754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.61  E-value=0.0004  Score=65.42  Aligned_cols=91  Identities=21%  Similarity=0.252  Sum_probs=71.0

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. .        ++.+.++     ..|+|+.+
T Consensus       252 LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~-----~ADIVI~a  316 (476)
T PTZ00075        252 IAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE-----TADIFVTA  316 (476)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh-----cCCEEEEC
Confidence            468999999999999999999999999 8999988777665554556532 1        2222221     48999999


Q ss_pred             CCCHHHHH-HHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLVQ-EAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~  257 (339)
                      .|....+. ..++.|+++ +.++.+|..
T Consensus       317 tGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             CCcccccCHHHHhccCCC-cEEEEcCCC
Confidence            99877664 899999997 999999865

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.51  E-value=0.0072  Score=54.02  Aligned_cols=138  Identities=9%  Similarity=0.062  Sum_probs=85.6

Q ss_pred             cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCC---CCCCEEEEEcc-CHHHHHHHHHHH-HcCCCEE
Q 019535          106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI  180 (339)
Q Consensus       106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~---~~~~~VLI~G~-G~iG~~a~~la~-~~G~~~V  180 (339)
                      .|-+|.++..+.... | ......+.+-| -+.|.|. +.+...-   -..+.|+|.++ +-+++.++.+++ ..+.-++
T Consensus        90 ~YN~Y~r~~~d~~y~-~-~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYD-P-EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccC-c-chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            566676665543321 1 11122233334 5667765 3333322   22356777776 788888888877 4444489


Q ss_pred             EEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          181 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       181 i~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +++. |+.+.++.+.+|. +.|+.|++         +..+.....-+++|..|+..+...+-+.+.+..-..+.+|..
T Consensus       166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t  233 (314)
T PF11017_consen  166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT  233 (314)
T ss_pred             EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence            9988 5677779999994 68888876         223322345677899999998888888887752345666654

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.42  E-value=0.0028  Score=57.45  Aligned_cols=103  Identities=21%  Similarity=0.285  Sum_probs=72.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +.+.+.++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+....    .+..+.+..
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc
Confidence            4456678899999999998 49999999998864 26999999988766654    35654432222    222221111


Q ss_pred             hcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          219 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                        .+.+|+|+.+.+.........+.|+++ |+++..
T Consensus       147 --~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 --FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             --cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence              136999999888766567888999997 998774

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.42  E-value=0.0015  Score=60.93  Aligned_cols=110  Identities=17%  Similarity=0.251  Sum_probs=75.9

Q ss_pred             hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHH
Q 019535          136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQI  215 (339)
Q Consensus       136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~  215 (339)
                      +-...+..+.+..+++++++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-++...   .++.  
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~--  223 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR--  223 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh--
Confidence            334444556677788999999999986 47788888888898 9999999999999887643211111111   2221  


Q ss_pred             HHHhcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          216 IIDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        ++ .+.+|.|+.     .++.   ...++.+.+.|+++ |.+++...
T Consensus       224 --~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        224 --DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             --hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence              11 347999874     3343   34578899999998 99988643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.0035  Score=54.12  Aligned_cols=104  Identities=21%  Similarity=0.201  Sum_probs=66.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCceEEeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      ++++|||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.+   +..+.+..+-...+.+.+.+++..  -+++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999987 8999999999999999 999999988776555 222   222333221101122222222221  1368


Q ss_pred             cEEEEcCCCH-----------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |.++.+.+..                       ...+..++.+..+ |+++.++..
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            9999888642                       1144556667776 899998864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.38  E-value=0.0011  Score=56.55  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=59.2

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC----ceEEeCCCCCCccHHHHHHHhcCC--Cc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--GA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga----~~vi~~~~~~~~~~~~~l~~~~~g--~~  224 (339)
                      ++.++|.|+ +++|.++++.....|+ +|+.+.|+.++++.+. +++.    ...+|..+  ...+.+.+..+...  .+
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCcc
Confidence            467889998 8999999999999999 9999999999988874 4662    34555555  23444455555444  69


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+.++..|-
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999998875

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.37  E-value=0.0038  Score=52.61  Aligned_cols=102  Identities=20%  Similarity=0.405  Sum_probs=70.1

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcC-CceEEeCCCCCCccHHHHHHHh
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~~g-a~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ...++.++++||.+|+|. |.+++.+++..+. .+|++++.+++..+.++    .++ ...+....    .+..+.+...
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence            456788999999999987 8888899887642 38999999998887664    355 23222111    2222323222


Q ss_pred             cCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEe
Q 019535          220 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       220 ~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~  254 (339)
                       .+.+|.||...+.   ...++.+.+.|+++ |+++..
T Consensus       109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence             2379999985543   34578888999997 998853

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0039  Score=55.24  Aligned_cols=77  Identities=21%  Similarity=0.346  Sum_probs=54.1

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcC--CCccEEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~v~d  229 (339)
                      .++||.|+ |.+|...++.+...|+ +|++++++.++.+.+...+...+ .|..+  .+.+.+.+.....  +++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            46899987 8999999999999999 99999998877776665554332 45444  1233333333322  37999999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9873

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.28  E-value=0.0022  Score=53.09  Aligned_cols=90  Identities=30%  Similarity=0.353  Sum_probs=62.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+.....+..    .     .++.+.+.+     .|+|+.+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~----~-----~~l~ell~~-----aDiv~~~   98 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE----Y-----VSLDELLAQ-----ADIVSLH   98 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE----E-----SSHHHHHHH------SEEEE-
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce----e-----eehhhhcch-----hhhhhhh
Confidence            358999999999999999999999999 999999988776644444431    1     234443433     6899887


Q ss_pred             CCCH-----HHHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLA-----SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~-----~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+..     ..-...+..|+++ ..+|.++.
T Consensus        99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hccccccceeeeeeeeeccccc-eEEEeccc
Confidence            7632     1234667788886 77777653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.28  E-value=0.0045  Score=52.56  Aligned_cols=111  Identities=18%  Similarity=0.194  Sum_probs=78.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +...++.+...+||-+|++ +|..++.+|..+. -.+++.+++++++.+.+++    .|....+..-.  ..+..+.+.+
T Consensus        51 L~~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~  127 (219)
T COG4122          51 LRLLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSR  127 (219)
T ss_pred             HHHHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHh
Confidence            3445566788899999864 5888889998886 3389999999999888865    56544222111  0366666666


Q ss_pred             hcCCCccEEE-EcCC--CHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          219 MTDGGADYCF-ECVG--LASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       219 ~~~g~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      ...+.||+|| |+.-  .+..++.+++.|+++ |.++.=....
T Consensus       128 ~~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~  169 (219)
T COG4122         128 LLDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF  169 (219)
T ss_pred             ccCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence            4445999998 7664  456699999999997 8777655443

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.20  E-value=0.0036  Score=53.09  Aligned_cols=101  Identities=14%  Similarity=0.167  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~  215 (339)
                      +.+.+.++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+..   .++..+.      .+.
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~  136 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG  136 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence            45667788899999999874 778888888764 2289999999887766643    4432   2332221      111


Q ss_pred             HHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          216 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.  ..+.||.|+-+.......+.+.+.|+++ |+++..
T Consensus       137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            11  1137999997666555567888999998 998764

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.16  E-value=0.00096  Score=56.58  Aligned_cols=107  Identities=20%  Similarity=0.259  Sum_probs=71.6

Q ss_pred             hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHH----hcCCceE--EeCCCCC
Q 019535          136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTEF--VNSKNCG  208 (339)
Q Consensus       136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~  208 (339)
                      +...|.  +.+.+.++++++||.+|+|. |..++-+++..|.. +|+.+++.++-.+.++    .++...+  +..+.  
T Consensus        58 P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg--  132 (209)
T PF01135_consen   58 PSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG--  132 (209)
T ss_dssp             HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G--
T ss_pred             HHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch--
Confidence            444443  56778899999999999874 88999999988753 6999998887665554    3565432  22221  


Q ss_pred             CccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          209 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       209 ~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                          .   .-+... +||.|+-+.+-+..-...++.|+++ |++|..-
T Consensus       133 ----~---~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi  172 (209)
T PF01135_consen  133 ----S---EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPI  172 (209)
T ss_dssp             ----G---GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEE
T ss_pred             ----h---hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEE
Confidence                1   111223 8999998887777567899999998 9998853

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK04148 hypothetical protein; Provisional

Probab=97.15  E-value=0.0026  Score=49.58  Aligned_cols=88  Identities=19%  Similarity=0.277  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ...++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+...+.+.--  ..+.  .+.    +++|+|+
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y----~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY----KNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH----hcCCEEE
Confidence            33456789999998 78755656667899 9999999999999888887654443211  1111  111    2689999


Q ss_pred             EcCCCHHHHHHHHHHhhc
Q 019535          229 ECVGLASLVQEAYACCRK  246 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~  246 (339)
                      .+-..++...-.+++...
T Consensus        83 sirpp~el~~~~~~la~~  100 (134)
T PRK04148         83 SIRPPRDLQPFILELAKK  100 (134)
T ss_pred             EeCCCHHHHHHHHHHHHH
Confidence            888888855555555544

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.14  E-value=0.0071  Score=50.45  Aligned_cols=79  Identities=23%  Similarity=0.257  Sum_probs=59.1

Q ss_pred             CCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC-ceEEeCCCCCCcc---HHHHHHHhcCCCc
Q 019535          152 VGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNCGDKS---VSQIIIDMTDGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga-~~vi~~~~~~~~~---~~~~l~~~~~g~~  224 (339)
                      ....|||.|+  |+||.+.+.=....|+ +|+++.++-+....+. ++|- ..-+|..+  +++   +..+++....|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~--~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK--PEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC--hHHHHHHHHHHhhCCCCce
Confidence            4568999975  8999999988889999 9999999988887775 6673 33455544  233   3345556666799


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+.++.+|.
T Consensus        83 d~L~NNAG~   91 (289)
T KOG1209|consen   83 DLLYNNAGQ   91 (289)
T ss_pred             EEEEcCCCC
Confidence            999997775

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.11  E-value=0.0088  Score=49.93  Aligned_cols=99  Identities=19%  Similarity=0.174  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCC-Cc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-GA  224 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g-~~  224 (339)
                      ..++++++||.+|+|+-+ .+..+++.. +..+|++++.++.+    +..+...+ .+..+   .+..+.+.+...+ ++
T Consensus        28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence            446889999999987644 444444443 43489999998754    11233322 23333   3445556655555 89


Q ss_pred             cEEEE-cC----CC------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          225 DYCFE-CV----GL------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       225 d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+|+. ..    |.            ...++.+.++|+++ |+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99994 32    21            34578899999997 9998864

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.08  E-value=0.006  Score=56.28  Aligned_cols=96  Identities=17%  Similarity=0.159  Sum_probs=69.2

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---C-ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---a-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .+|||+|+|.+|+.+++.+.+.+-.+|+..++++++.+.+....   . ...+|..+  .+.+.+.+    . ++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li----~-~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALI----K-DFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHH----h-cCCEEEE
Confidence            46999999999999999988888449999999999988886653   2 24455544  12222222    2 3599999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |.+.....+.+-.|+..+ -.++.+...
T Consensus        75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~  101 (389)
T COG1748          75 AAPPFVDLTILKACIKTG-VDYVDTSYY  101 (389)
T ss_pred             eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence            999888666666667665 677777654

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.08  E-value=0.0026  Score=48.00  Aligned_cols=94  Identities=23%  Similarity=0.304  Sum_probs=62.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      ++.+||-+|+|. |..++.+++. .++ +|++++.+++..+.+++.    +. +++- ...   .++ . ......++||
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~---~d~-~-~~~~~~~~~D   72 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQ---GDA-E-FDPDFLEPFD   72 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEE---SCC-H-GGTTTSSCEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEE---Ccc-c-cCcccCCCCC
Confidence            578999999874 8888888884 577 999999999988887652    21 2221 111   233 1 1111122799


Q ss_pred             EEEEcC-CC---H------HHHHHHHHHhhcCCcEEEEe
Q 019535          226 YCFECV-GL---A------SLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       226 ~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +|+... ..   .      ..++.+.+.|+++ |+++.-
T Consensus        73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            999766 21   1      2378899999997 988753

...

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.07  E-value=0.019  Score=47.39  Aligned_cols=93  Identities=18%  Similarity=0.247  Sum_probs=64.0

Q ss_pred             EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC-
Q 019535          156 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL-  233 (339)
Q Consensus       156 VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~-  233 (339)
                      |+|.|+ |.+|...++.+...|. +|+++++++++.+.  ..+.. ++..+-   .+. +.+.+... ++|+||.++|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence            789997 9999999999999998 99999999988776  33333 333333   233 33333332 69999999984 


Q ss_pred             ---HHHHHHHHHHhhcC-CcEEEEeccC
Q 019535          234 ---ASLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       234 ---~~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                         ....+..++.+... -.+++.++..
T Consensus        72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred             cccccccccccccccccccccceeeecc
Confidence               33366666666553 1377777654

...

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.06  E-value=0.0042  Score=55.49  Aligned_cols=96  Identities=23%  Similarity=0.363  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ..++++||-+|+|. |.+++..++ +|+++|++++.++...+.++.    .|. ..+.-...   .+.       ..+.|
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~  226 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKF  226 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-E
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccC
Confidence            56789999998752 444443333 499899999999887666644    332 22211111   111       11479


Q ss_pred             cEEEEcCCCHHH---HHHHHHHhhcCCcEEEEeccCC
Q 019535          225 DYCFECVGLASL---VQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       225 d~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+|+-.+-....   .....+.++++ |.+++.|...
T Consensus       227 dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  227 DLVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             CEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            999966655442   44556678897 9999999863

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0055  Score=54.46  Aligned_cols=78  Identities=18%  Similarity=0.285  Sum_probs=55.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHH---HhcCCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIII---DMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~---~~~~g~~d~  226 (339)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|..+  .+.+.+.+.   +...+.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence            3568999987 9999999999888999 99999999888877766554332 34443  122222222   223357999


Q ss_pred             EEEcCC
Q 019535          227 CFECVG  232 (339)
Q Consensus       227 v~d~~g  232 (339)
                      +|+++|
T Consensus        80 li~~Ag   85 (277)
T PRK05993         80 LFNNGA   85 (277)
T ss_pred             EEECCC
Confidence            999876

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.02  E-value=0.011  Score=45.21  Aligned_cols=102  Identities=22%  Similarity=0.318  Sum_probs=67.9

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHH
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~  218 (339)
                      .....+.++.+||-+|+|. |..+..+++..+..+|++++.++...+.+++    ++..  .++..+.   ..   .+..
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~---~~~~   84 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PE---ALED   84 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---cc---cChh
Confidence            3445667788999999876 8888888888754489999999888777643    3432  2222211   11   0111


Q ss_pred             hcCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       ..+.+|+|+...+.   ...++.+.+.|+++ |+++.-.
T Consensus        85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence             11379999965432   33588999999997 9987653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.01  E-value=0.012  Score=50.28  Aligned_cols=101  Identities=18%  Similarity=0.274  Sum_probs=70.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l  216 (339)
                      +...+.++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    .|..  .++..+.   .   +  
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~---~--  138 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---T---L--  138 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---c---c--
Confidence            55667889999999999874 7788888887753 289999999988777654    3432  2232221   0   0  


Q ss_pred             HHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .+.. +.||+|+-........+..++.|+++ |+++..-
T Consensus       139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~~  176 (212)
T PRK13942        139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIPV  176 (212)
T ss_pred             -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEEE
Confidence             1112 37999986555555577889999998 9988753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.98  E-value=0.0046  Score=51.29  Aligned_cols=78  Identities=21%  Similarity=0.282  Sum_probs=57.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---CceEEeCCCCCCccHHHHHHHh-cCC--Cc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---VTEFVNSKNCGDKSVSQIIIDM-TDG--GA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---a~~vi~~~~~~~~~~~~~l~~~-~~g--~~  224 (339)
                      .|.+|||.|+ +++|+..++-...+|- +||...|+.++++.+++.-   ...+.|..+   .+-.+++.++ .+.  ..
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence            4679999965 7999999999999998 9999999999999887632   245666665   4433333332 223  57


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      +++++++|-
T Consensus        80 NvliNNAGI   88 (245)
T COG3967          80 NVLINNAGI   88 (245)
T ss_pred             heeeecccc
Confidence            999998884

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.93  E-value=0.0073  Score=52.84  Aligned_cols=79  Identities=24%  Similarity=0.315  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-eE--EeCCCCCCccHHHHHHH-hc
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EF--VNSKNCGDKSVSQIIID-MT  220 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~-~v--i~~~~~~~~~~~~~l~~-~~  220 (339)
                      ..+.++||.|+ ++||...+..+...|. +++.+.|+.++++.+.+ +    |.. .+  +|..+   .+-.+.+.. +.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~   79 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK   79 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence            45789999998 8999999999999999 99999999999887743 2    321 23  33333   333444433 32


Q ss_pred             -CC-CccEEEEcCCC
Q 019535          221 -DG-GADYCFECVGL  233 (339)
Q Consensus       221 -~g-~~d~v~d~~g~  233 (339)
                       .+ .+|+.++++|-
T Consensus        80 ~~~~~IdvLVNNAG~   94 (265)
T COG0300          80 ERGGPIDVLVNNAGF   94 (265)
T ss_pred             hcCCcccEEEECCCc
Confidence             22 79999999985

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0068  Score=51.98  Aligned_cols=77  Identities=14%  Similarity=0.193  Sum_probs=51.9

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE--EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+++++...+  .|..+  .+.+.+.+..+..+++|++|.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~   78 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN   78 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence            46899987 9999999988888999 99999998877666655442222  33333  1223333333333389999988


Q ss_pred             CCC
Q 019535          231 VGL  233 (339)
Q Consensus       231 ~g~  233 (339)
                      +|.
T Consensus        79 ag~   81 (225)
T PRK08177         79 AGI   81 (225)
T ss_pred             Ccc
Confidence            754

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.87  E-value=0.011  Score=52.18  Aligned_cols=108  Identities=20%  Similarity=0.335  Sum_probs=76.5

Q ss_pred             hhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccH
Q 019535          140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSV  212 (339)
Q Consensus       140 a~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~  212 (339)
                      .+..+.+.+++++|.+||-+|+|- |.+++..|+..|+ +|++++-|++..+.+++    .|..   .+.-      .++
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l------~d~  131 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL------QDY  131 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe------ccc
Confidence            344467888999999999999875 7788888889999 99999999998877754    4533   1211      111


Q ss_pred             HHHHHHhcCCCccEEE-----EcCCC---HHHHHHHHHHhhcCCcEEEEeccCCCCC
Q 019535          213 SQIIIDMTDGGADYCF-----ECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGS  261 (339)
Q Consensus       213 ~~~l~~~~~g~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~  261 (339)
                      .    ... +.||-|+     +.+|.   +.-++.+.+.|+++ |++++.......+
T Consensus       132 r----d~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~~  182 (283)
T COG2230         132 R----DFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPDQ  182 (283)
T ss_pred             c----ccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCCc
Confidence            1    111 1377764     35554   34488999999998 9999988765443

>PRK14967 putative methyltransferase; Provisional

Probab=96.83  E-value=0.088  Score=45.18  Aligned_cols=98  Identities=18%  Similarity=0.202  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhc
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ....++++++||..|+|. |..++.+++. +..+|++++.+++..+.+++    .+.. .+++      .++.+.+   .
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~~---~   98 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARAV---E   98 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhhc---c
Confidence            344577889999999986 8888888775 55589999999988776644    3432 2222      2232211   1


Q ss_pred             CCCccEEEEcCCC---------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          221 DGGADYCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g~~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+.||+|+...+-                           ...++.+.+.|+++ |+++.+-
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            2379999864210                           11245678899997 9988763

>PRK12742 oxidoreductase; Provisional

Probab=96.82  E-value=0.037  Score=47.62  Aligned_cols=101  Identities=23%  Similarity=0.286  Sum_probs=61.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH-HhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .++++||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+  ...+.+.+.+  .+++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence            3678999987 8999999999999999 7877654 44444433 34554322 23322  1222233322  1369999


Q ss_pred             EEcCCCHH-------------------------HHHHHHHHhhcCCcEEEEeccCC
Q 019535          228 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       228 ~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+++|...                         ....++..+... |+++.++...
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~  134 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN  134 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence            99886410                         013444556665 8999887643

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.81  E-value=0.015  Score=48.55  Aligned_cols=97  Identities=19%  Similarity=0.232  Sum_probs=62.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      +.++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+... +....   .+..+ +..  .+.||
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~-~~~--~~~fD  114 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE-FGQ--EEKFD  114 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh-CCC--CCCcc
Confidence            44588999998863 6666666665543399999999887777653    44432 22222   22222 111  23899


Q ss_pred             EEEEc-CCC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          226 YCFEC-VGL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       226 ~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +|+-. ... ...++.+.+.|+++ |+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            99953 322 35578899999998 9998884

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.81  E-value=0.024  Score=48.95  Aligned_cols=109  Identities=20%  Similarity=0.341  Sum_probs=76.0

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +....+..+|++||-+|+| +|-.++.+++..|-.+|++++.+++.++.+++    .|... +..-.   .+ ++.+ ..
T Consensus        43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~d-Ae~L-Pf  115 (238)
T COG2226          43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GD-AENL-PF  115 (238)
T ss_pred             HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ec-hhhC-CC
Confidence            4555666789999999876 48999999999986699999999999888865    22221 11111   11 1111 12


Q ss_pred             cCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          220 TDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       220 ~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      -+..||++.-+.|      -..+++++.+.|.|+ |+++.+......
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~  161 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD  161 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence            2237899876554      255699999999998 999999876543

>PRK00536 speE spermidine synthase; Provisional

Probab=96.78  E-value=0.0063  Score=53.30  Aligned_cols=100  Identities=12%  Similarity=-0.043  Sum_probs=68.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ...++|||+|+|- |.++-.++|.- . +|+.++.+++-.+.+++ +.. ...++...   -.+...+.+...+.||+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence            4568999998764 55666777775 3 89999999988888887 321 11122222   2222234443334799998


Q ss_pred             -EcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          229 -ECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       229 -d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       |+...+.-.+.+.++|+++ |.++.-+..
T Consensus       145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~s  173 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKED-GVFISVAKH  173 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCC-cEEEECCCC
Confidence             7677776688999999998 998887643

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.76  E-value=0.034  Score=49.15  Aligned_cols=109  Identities=23%  Similarity=0.300  Sum_probs=71.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---E--EeCCCCCCccHHHHHHHh--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---F--VNSKNCGDKSVSQIIIDM--  219 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---v--i~~~~~~~~~~~~~l~~~--  219 (339)
                      .++.|+|.|+ ++||.+++.-.-..|+ +++.+.+..++++.+    ++.+...   +  +|..+  .++..+.+.+.  
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~   87 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR   87 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence            5788999998 7999999888888999 788888888777666    3344322   2  23333  23333333222  


Q ss_pred             cCCCccEEEEcCCC-------------------------HHHHHHHHHHhhcCC-cEEEEeccCCCCCcc
Q 019535          220 TDGGADYCFECVGL-------------------------ASLVQEAYACCRKGW-GKTIVLGVDQPGSQL  263 (339)
Q Consensus       220 ~~g~~d~v~d~~g~-------------------------~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~  263 (339)
                      .-|++|+.++.+|-                         -...+.++..|...+ |++|.++...+-...
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL  157 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence            12489999998775                         123566777777755 899999876544333

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.75  E-value=0.0093  Score=56.06  Aligned_cols=76  Identities=16%  Similarity=0.115  Sum_probs=54.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      -.+.+|||+|+|.+|.+++..+...|+++++++.++.++.+.+ ..++...++..         +.+.+.. ..+|+||+
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---------~~l~~~l-~~aDiVI~  248 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---------SELPQLI-KKADIIIA  248 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---------HHHHHHh-ccCCEEEE
Confidence            3578999999999999999999999987899999998775554 44542222221         1122211 24899999


Q ss_pred             cCCCHHH
Q 019535          230 CVGLASL  236 (339)
Q Consensus       230 ~~g~~~~  236 (339)
                      |++.+..
T Consensus       249 aT~a~~~  255 (414)
T PRK13940        249 AVNVLEY  255 (414)
T ss_pred             CcCCCCe
Confidence            9998763

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.75  E-value=0.033  Score=54.10  Aligned_cols=105  Identities=13%  Similarity=0.132  Sum_probs=66.6

Q ss_pred             HhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---------cCC-----ceE--EeCCCCC
Q 019535          146 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGV-----TEF--VNSKNCG  208 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---------~ga-----~~v--i~~~~~~  208 (339)
                      ...+.+.+.+|||.|+ |.+|..+++.+...|+ +|++++++.++.+.+.+         .|.     ..+  .|..+  
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD--  149 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK--  149 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence            3456678899999987 9999999999988999 89999998877654321         121     112  22222  


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHH---------------HHHHHHHHhhcC-CcEEEEeccCC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVDQ  258 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~  258 (339)
                          .+.+.+.. +++|+||+++|...               ....+++.+... .++||.++...
T Consensus       150 ----~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        150 ----PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             ----HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence                12333332 36899999987531               123334444332 26899887653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.74  E-value=0.018  Score=46.99  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=63.5

Q ss_pred             cccccchhhhhhHHHHHhcCCCCCCEEEEEccCH-HHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC
Q 019535          130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG  208 (339)
Q Consensus       130 aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~-iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~  208 (339)
                      ....||....+...+.+...--.+.+|||+|+|. +|..++..+...|+ +|+++.++.                     
T Consensus        21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------   78 (168)
T cd01080          21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------   78 (168)
T ss_pred             CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence            3455654444444333333335789999999986 59989999999999 788777542                     


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +++.+.+.     .+|+||.+++.+..+..  +.+.++ -.+++++..
T Consensus        79 -~~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p  118 (168)
T cd01080          79 -KNLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN  118 (168)
T ss_pred             -hhHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence             12223332     37999999998763333  346665 677777764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08017 oxidoreductase; Provisional

Probab=96.73  E-value=0.0067  Score=52.99  Aligned_cols=77  Identities=23%  Similarity=0.325  Sum_probs=54.4

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccH---HHHHHHhcCCCccEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSV---SQIIIDMTDGGADYCF  228 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~---~~~l~~~~~g~~d~v~  228 (339)
                      +++||.|+ |.+|..+++.+...|+ +|+++.++.++.+.+++.++..+ .|..+  ...+   .+.+.+...+.+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence            57999987 9999999999999999 89999999888877777775433 34333  1222   2233333334789999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      .+.|.
T Consensus        80 ~~ag~   84 (256)
T PRK08017         80 NNAGF   84 (256)
T ss_pred             ECCCC
Confidence            88763

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.01  Score=54.35  Aligned_cols=79  Identities=25%  Similarity=0.311  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHh--cC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDM--TD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~--~~  221 (339)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  .+.+.+.+.+.  ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 8999999999999999 899999988776543    3345432   234333  12222222221  12


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.032  Score=48.06  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---CceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFV--NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g---a~~vi--~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.   ..+.+  |..+  ...+.+.+.+...  +
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            3578999987 9999999988888899 899999888765544 3332   11222  3222  1233333333321  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|++.|.
T Consensus        82 ~~d~vi~~ag~   92 (237)
T PRK07326         82 GLDVLIANAGV   92 (237)
T ss_pred             CCCEEEECCCC
Confidence            79999998764

>PRK00811 spermidine synthase; Provisional

Probab=96.70  E-value=0.013  Score=52.22  Aligned_cols=98  Identities=12%  Similarity=0.153  Sum_probs=64.6

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C-----C---ceEEeCCCCCCccHHHHHHHhcC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V---TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-g-----a---~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..+++||++|+|. |..+..+++..+.++|++++.+++-.+.+++. .     .   .++ ....   .+..+.+.. ..
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv-~v~~---~Da~~~l~~-~~  148 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRV-ELVI---GDGIKFVAE-TE  148 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCce-EEEE---CchHHHHhh-CC
Confidence            3567999998864 77777777776766999999999988888763 1     1   111 1111   344444443 33


Q ss_pred             CCccEEEE-cCCC---------HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCFE-CVGL---------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~d-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.+|+||- +...         ...++.+.+.|+++ |.++...
T Consensus       149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        149 NSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             CcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            48999984 3211         23357888999998 9988754

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.69  E-value=0.025  Score=45.57  Aligned_cols=97  Identities=21%  Similarity=0.305  Sum_probs=60.3

Q ss_pred             HHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +.+..+ .-.|++++|.|-|.+|.-.++.++.+|+ +|++++.+|-+.-.+.--|.. +.        .+.+.+     .
T Consensus        13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~a~-----~   77 (162)
T PF00670_consen   13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEEAL-----R   77 (162)
T ss_dssp             HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHHHT-----T
T ss_pred             HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHHHH-----h
Confidence            444444 3468889999999999999999999999 999999998766555555543 22        222222     2


Q ss_pred             CccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVGLASL-VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..|++|.++|.... ..+-++.|+++ -.+...|.
T Consensus        78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh  111 (162)
T PF00670_consen   78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGH  111 (162)
T ss_dssp             T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSS
T ss_pred             hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCc
Confidence            47999999998763 45778889885 44444444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02476 O-methyltransferase

Probab=96.69  E-value=0.017  Score=51.11  Aligned_cols=107  Identities=17%  Similarity=0.190  Sum_probs=71.4

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +....+....++||-+|++ +|..++.+|+.++. .+|+.++.+++..+.+++    .|..+-+....   .+..+.+.+
T Consensus       110 L~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~  185 (278)
T PLN02476        110 LAMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS  185 (278)
T ss_pred             HHHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence            4445566778999999974 47777888887642 279999999988777754    56543233222   455555554


Q ss_pred             hc----CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MT----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~----~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.    .+.||.|| |+--.  ...++.+++.++++ |.++.=.
T Consensus       186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN  228 (278)
T PLN02476        186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN  228 (278)
T ss_pred             HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence            42    23799998 55432  44588999999997 8876543

>PRK06182 short chain dehydrogenase; Validated

Probab=96.67  E-value=0.011  Score=52.27  Aligned_cols=78  Identities=19%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhc--CCCccEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~--~g~~d~v~  228 (339)
                      +.+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+...+... ..|..+  .+.+.+.+.+..  .+++|++|
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence            568999987 8999999999888999 9999999888776665545432 244444  233333333322  23799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      ++.|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            98874

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.67  E-value=0.0053  Score=52.46  Aligned_cols=101  Identities=18%  Similarity=0.210  Sum_probs=67.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l  216 (339)
                      +.+.+.++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    +|.+.  ++..+      ..+..
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~~  141 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQGW  141 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccCC
Confidence            55667789999999999874 7777788887653 269999999887776643    44332  22211      11111


Q ss_pred             HHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          217 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .  ..+.||+|+-........+.+.+.|+++ |+++..
T Consensus       142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             c--ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            0  1137999985544445467888999998 998775

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.67  E-value=0.018  Score=49.98  Aligned_cols=79  Identities=19%  Similarity=0.186  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC--Cc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VT-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g--a~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.  .. .+  .|..+  ...+...+.+..  .+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG   80 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            3568999987 9999999988888899 8999999887655442 222  11 12  22222  222333333221  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|++|.+.|.
T Consensus        81 ~~d~vi~~ag~   91 (251)
T PRK07231         81 SVDILVNNAGT   91 (251)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.65  E-value=0.019  Score=49.75  Aligned_cols=107  Identities=15%  Similarity=0.193  Sum_probs=69.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +....+..+.++||-+|+| +|..++.+++.++ ..+|+.++.+++..+.+++    .|...-+....   .+..+.+.+
T Consensus        60 L~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~  135 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQ  135 (234)
T ss_pred             HHHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHH
Confidence            3344566778899999975 4777777777763 3399999999988777754    45332222222   344555544


Q ss_pred             hc----CCCccEEE-EcC--CCHHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MT----DGGADYCF-ECV--GLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~----~g~~d~v~-d~~--g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.    .+.||+|| |+.  .-...++.+++.++++ |.++.-.
T Consensus       136 l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        136 LLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             HHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence            42    23799998 443  2244578889999997 8776543

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.65  E-value=0.015  Score=51.76  Aligned_cols=128  Identities=21%  Similarity=0.278  Sum_probs=73.7

Q ss_pred             cceEEcCCCCCccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535          116 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  194 (339)
Q Consensus       116 ~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  194 (339)
                      ...+++.+.+-+.    ......|++. +.-+ .-++++.+||-+|+|. |.+++.. ..+|+++|++++.++-..+.++
T Consensus       130 ~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~DiDp~AV~aa~  202 (300)
T COG2264         130 ELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVDIDPQAVEAAR  202 (300)
T ss_pred             ceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEecCCHHHHHHHH
Confidence            4556666655432    2333344443 2222 1256899999999753 5544433 3458879999999987666554


Q ss_pred             h----cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535          195 R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       195 ~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .    .+.........   ...   .....++.+|+|+-.+=..   ...+.....++++ |++++.|..
T Consensus       203 eNa~~N~v~~~~~~~~---~~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl  265 (300)
T COG2264         203 ENARLNGVELLVQAKG---FLL---LEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL  265 (300)
T ss_pred             HHHHHcCCchhhhccc---ccc---hhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence            3    34332111110   111   1112224899999655322   2366778899997 999999976

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.033  Score=48.96  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++.. .+  .|..+  .+++.+.+....  -+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999987 8999999999999999 999999987765544 344421 12  33333  122333333221  1378


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|++.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998874

>PLN02366 spermidine synthase

Probab=96.64  E-value=0.017  Score=52.11  Aligned_cols=101  Identities=17%  Similarity=0.173  Sum_probs=65.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC------ceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV------TEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga------~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      ...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++ ..      +.-+....   .+..+.+++..++.
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~~~~~  165 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhccCCC
Confidence            5578999998765 66677778776666899999998877777663 11      10011111   34444454433348


Q ss_pred             ccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          224 ADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|+|| |+..         +...++.+.++|+++ |.++.-+.
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~  207 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE  207 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence            99998 4432         123477889999998 99876543

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.044  Score=47.49  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+    ++.+.. .+  .|..+  .+.+.+.+.+...  
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 899998887755433    223322 22  23333  1222222222211  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.++|.
T Consensus        83 ~~id~vi~~ag~   94 (250)
T PRK12939         83 GGLDGLVNNAGI   94 (250)
T ss_pred             CCCCEEEECCCC
Confidence            379999999875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.62  E-value=0.045  Score=44.49  Aligned_cols=88  Identities=24%  Similarity=0.229  Sum_probs=59.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+.. .       .+..+.+..     .|+||-|+...
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~s~~e~~~~-----~dvvi~~v~~~   68 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-A-------DSPAEAAEQ-----ADVVILCVPDD   68 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-E-------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-h-------hhhhhHhhc-----ccceEeecccc
Confidence            68899999999999999999999 9999999999998888777432 2       233333333     58999999886


Q ss_pred             HHHHHHHH------HhhcCCcEEEEeccC
Q 019535          235 SLVQEAYA------CCRKGWGKTIVLGVD  257 (339)
Q Consensus       235 ~~~~~~~~------~l~~~~G~~v~~g~~  257 (339)
                      ...+..+.      .+.++ ..++.++..
T Consensus        69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~   96 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPG-KIIIDMSTI   96 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred             hhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence            65655544      34454 566666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.62  E-value=0.02  Score=49.25  Aligned_cols=104  Identities=21%  Similarity=0.264  Sum_probs=75.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +...+++.+|.+|+-.|.|+ |.+++-||++.|. .+|+..+..++..+.+++    +|....+....   .|..+    
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~----  157 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVRE----  157 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccccc----
Confidence            44568899999999998874 8889999998875 589999998888777643    44333222222   33322    


Q ss_pred             hcCC-CccEEE-EcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          219 MTDG-GADYCF-ECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       219 ~~~g-~~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ...+ .+|.+| |.-.-...++.+.+.|.++ |.++.+..
T Consensus       158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             cccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            2223 799997 6655667799999999998 99999854

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.014  Score=50.99  Aligned_cols=79  Identities=16%  Similarity=0.263  Sum_probs=52.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cC-CceEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG-VTEFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~g-a~~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+++.+++++.+.+..    .+ ...++  |..+  .+++.+.+.+..  .
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhc
Confidence            4689999987 9999999999999999 89999998877655432    12 11222  3222  223333333321  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        85 ~~~d~li~~ag~   96 (258)
T PRK06949         85 GTIDILVNNSGV   96 (258)
T ss_pred             CCCCEEEECCCC
Confidence            378999998873

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.61  E-value=0.0052  Score=54.44  Aligned_cols=100  Identities=19%  Similarity=0.306  Sum_probs=63.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +.+.+++++|++||-+|+| -|..+..+|+..|+ +|+++..+++..+++++    .|..   .+..      .++.   
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~------~D~~---  122 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL------QDYR---  122 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE------S-GG---
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------eecc---
Confidence            5677899999999999987 47778888888899 99999999998887753    4521   2221      1221   


Q ss_pred             HHhcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          217 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       217 ~~~~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       ++ .+.||.|+.     .+|.   +..++.+.+.|+|+ |++++-...
T Consensus       123 -~~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i~  168 (273)
T PF02353_consen  123 -DL-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTIT  168 (273)
T ss_dssp             -G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEEE
T ss_pred             -cc-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEecc
Confidence             11 127899864     4443   34588999999998 999876543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.068  Score=48.96  Aligned_cols=79  Identities=19%  Similarity=0.141  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.+++|.|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  .+.+.+.+....  -
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4578999987 8999999999989999 899999987765543    2345332   234333  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.041  Score=47.75  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=61.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++.++.+ +.+.+    +..+.. ..  .|..+  .+++.+.+.+... 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence            3578999987 8999999998888999 8888887643 22222    222322 12  23333  2223333333222 


Q ss_pred             -CCccEEEEcCCCH-------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 -g~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +++|+++.+.+..                   ..++.+.+.+... |+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence             3689999877542                   2345555555665 88888865

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.59  E-value=0.012  Score=56.76  Aligned_cols=73  Identities=23%  Similarity=0.254  Sum_probs=53.6

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.++++|+|+|.|..|++++++++..|+ +|++.+..+.+.+.++++|+.. +....     ..+.+.     .+|+|+.
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~-----~~D~VV~   76 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA-----DYALVVT   76 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh-----cCCEEEE
Confidence            5578899999999999999999999999 8999997766666677777643 22111     112221     3799998


Q ss_pred             cCCCH
Q 019535          230 CVGLA  234 (339)
Q Consensus       230 ~~g~~  234 (339)
                      +.|-+
T Consensus        77 SpGi~   81 (488)
T PRK03369         77 SPGFR   81 (488)
T ss_pred             CCCCC
Confidence            88764

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.59  E-value=0.027  Score=41.98  Aligned_cols=89  Identities=21%  Similarity=0.296  Sum_probs=59.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|||+|+|.+|..-++.+...|+ +|++++...   +..+  +..... .+     .+.    +. -.++++||-+.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~-----~~~----~~-l~~~~lV~~at   68 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RR-----EFE----ED-LDGADLVFAAT   68 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ES-----S-G----GG-CTTESEEEE-S
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hh-----hHH----HH-HhhheEEEecC
Confidence            47899999999999999999999999 999998765   2222  211222 11     221    11 12689999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +.+..-+...+..+.. |.++.....+
T Consensus        69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p   94 (103)
T PF13241_consen   69 DDPELNEAIYADARAR-GILVNVVDDP   94 (103)
T ss_dssp             S-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred             CCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence            9988666777777765 8888886643

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.021  Score=49.46  Aligned_cols=77  Identities=19%  Similarity=0.306  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCce-EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+... ..|..+   .+..+.+.+. .+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence            4578999987 8999999999999999 89999988777655533 34432 234333   2222222222 23799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      ++.|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            98874

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=96.56  E-value=0.0061  Score=51.56  Aligned_cols=103  Identities=17%  Similarity=0.245  Sum_probs=68.2

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.....+||-+|++ +|..++.+|+.+.  . +|+.++.+++..+.+++    .|...-+....   .+..+.+.++.
T Consensus        40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~  114 (205)
T PF01596_consen   40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELA  114 (205)
T ss_dssp             HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHH
T ss_pred             HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHH
Confidence            3445567899999975 4888999998874  4 99999999998877754    45322122222   34555555543


Q ss_pred             C----CCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535          221 D----GGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~----g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .    +.||.|| |+.-.  ...++.++++++++ |.++.=.
T Consensus       115 ~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN  155 (205)
T PF01596_consen  115 NDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN  155 (205)
T ss_dssp             HTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred             hccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence            2    3699998 76643  23377889999996 7666544

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.55  E-value=0.015  Score=51.32  Aligned_cols=99  Identities=17%  Similarity=0.159  Sum_probs=72.2

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC-
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV-  231 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~-  231 (339)
                      ..+|.|+|+|.+|.-++.+|.-+|+ +|...+.+.+|+..+..+-..++-.... .+.++.+.+.     ++|++|.++ 
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~s-t~~~iee~v~-----~aDlvIgaVL  240 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYS-TPSNIEEAVK-----KADLVIGAVL  240 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEc-CHHHHHHHhh-----hccEEEEEEE
Confidence            4578899999999999999999999 9999999999998887643333221111 1244444443     479998755 


Q ss_pred             -CC----HHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          232 -GL----ASLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       232 -g~----~~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                       ++    ....++.++.|.++ +.+|++....+
T Consensus       241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG  272 (371)
T COG0686         241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG  272 (371)
T ss_pred             ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence             22    23477889999998 99999987654

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.55  E-value=0.066  Score=44.95  Aligned_cols=104  Identities=20%  Similarity=0.342  Sum_probs=64.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~  217 (339)
                      +...+++.++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    ++...  ++.      .+..+.+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~------~d~~~~~~  104 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE------GSAPECLA  104 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE------CchHHHHh
Confidence            44556778889999998753 5566666665532399999999988777653    45432  222      22222222


Q ss_pred             HhcCCCccEE-EEcCCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYC-FECVGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v-~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+. ..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus       105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            221 234554 443322 35588999999997 99888753

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.54  E-value=0.0098  Score=48.70  Aligned_cols=105  Identities=19%  Similarity=0.167  Sum_probs=67.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC-CCCC-------------CccHHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCG-------------DKSVSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~-~~~~-------------~~~~~~~l~  217 (339)
                      ++.+|+|+|+|.+|+.|+++++.+|+ +++..+..+++.+..+..++..+... .+..             +......+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34789999999999999999999999 89999999988888888776544331 1100             011222222


Q ss_pred             HhcCCCccEEEEcC--CC---H-HHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          218 DMTDGGADYCFECV--GL---A-SLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       218 ~~~~g~~d~v~d~~--g~---~-~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      +... .+|++|.+.  .+   + ...++.++.|.++ ..+++++...+
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g  143 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG  143 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence            2211 378888532  12   1 2256778888886 88888876543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.016  Score=50.73  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=52.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      .+++|||+|+ |.+|...++.+...|+ +|+.+++++.+.+.. ..++.. ...|..+  .+.+.+.+.+..  .+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4689999987 9999999999999999 899999887765544 334432 2234433  122222333221  137899


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998863

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.52  E-value=0.025  Score=51.20  Aligned_cols=91  Identities=25%  Similarity=0.416  Sum_probs=61.6

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      .+|.|+|+|.+|...++.++..|. .+|+++++++++.+.+++.|......      .+..+.+     ...|+||.|++
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence            579999999999999998888884 37999999988888888777532111      1222212     25899999998


Q ss_pred             CHHH---HHHHHHHhhcCCcEEEEecc
Q 019535          233 LASL---VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~~~---~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ....   ++.....++++ ..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            7542   23333455664 56666654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.49  E-value=0.037  Score=46.81  Aligned_cols=35  Identities=31%  Similarity=0.322  Sum_probs=31.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|..+++.+...|..++..++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999999889998876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.053  Score=47.50  Aligned_cols=77  Identities=19%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC-C-c--eEEeCCCCCCccHHHHHHHhc---CCCc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-V-T--EFVNSKNCGDKSVSQIIIDMT---DGGA  224 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~g-a-~--~vi~~~~~~~~~~~~~l~~~~---~g~~  224 (339)
                      .++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.. .+ . .  ...|..+  ...+.+.+....   .+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            47899987 8999999998888999 89999988877665533 22 1 1  1234443  122333333321   3479


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+++.++|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.017  Score=50.65  Aligned_cols=83  Identities=23%  Similarity=0.258  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc----eEEeCCCCCCccHHHHHHHhc--
Q 019535          149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT----EFVNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~----~vi~~~~~~~~~~~~~l~~~~--  220 (339)
                      +.-++.++||.|+ |.+|..+++.+...|+ +|+.+.++++..+.+.+ ....    ...|..+  .+.+.+.+.+..  
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   83 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVER   83 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            3446789999987 9999999999999999 89999988776655433 2211    2233333  122222222221  


Q ss_pred             CCCccEEEEcCCCH
Q 019535          221 DGGADYCFECVGLA  234 (339)
Q Consensus       221 ~g~~d~v~d~~g~~  234 (339)
                      -+++|+||.+.|..
T Consensus        84 ~~~~d~vi~~ag~~   97 (264)
T PRK12829         84 FGGLDVLVNNAGIA   97 (264)
T ss_pred             hCCCCEEEECCCCC
Confidence            13799999988753

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.44  E-value=0.033  Score=49.73  Aligned_cols=43  Identities=28%  Similarity=0.234  Sum_probs=37.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  194 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  194 (339)
                      .+.+|+|+|+|++|++++..+...|+++|++++++.++.+.+.
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            4678999999999999999999999989999999988766653

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.44  E-value=0.015  Score=48.91  Aligned_cols=101  Identities=16%  Similarity=0.253  Sum_probs=63.9

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhc
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .+.....++.+||.+|+|. |..+..+++. |. +|++++.+++..+.+++.    +...+ +...   .++.+.  .+ 
T Consensus        23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~-   92 (197)
T PRK11207         23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF-   92 (197)
T ss_pred             HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-
Confidence            3444556778999999874 7777788765 77 999999999877776542    22211 1111   122110  11 


Q ss_pred             CCCccEEEEcCC----C----HHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DGGADYCFECVG----L----ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+.||+|+....    .    ...++.+.+.|+++ |.++.+..
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~  135 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA  135 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence            237999986432    1    24477888899998 99665543

>PRK01581 speE spermidine synthase; Validated

Probab=96.41  E-value=0.064  Score=49.12  Aligned_cols=100  Identities=15%  Similarity=0.113  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-----------CceEEeCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----------VTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-----------a~~vi~~~~~~~~~~~~~l~~  218 (339)
                      .....+|||+|+| .|.++..+++..+.++|++++.+++-.+.++++.           ..++ ...-   .+..+.+.+
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~  222 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS  222 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence            3456799999976 4667777777666669999999999898888521           1111 1111   344444443


Q ss_pred             hcCCCccEEE-EcCCC----------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          219 MTDGGADYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       219 ~~~g~~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       ..+.||+|| |....          ...++.+.+.|+++ |.++.-..
T Consensus       223 -~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        223 -PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             -cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence             334899998 53221          22477889999998 99887753

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.41  E-value=0.084  Score=44.53  Aligned_cols=81  Identities=26%  Similarity=0.348  Sum_probs=56.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.+++ +|+. .++..+            +.....|+++-|
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~~~~Dv~vp~   92 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYSVDADVFAPC   92 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hccccCCEEEec
Confidence            56789999999999999999999999 89999988887766644 4643 333221            111158899876


Q ss_pred             CCCHHHHHHHHHHhhc
Q 019535          231 VGLASLVQEAYACCRK  246 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~  246 (339)
                      ..........++.+..
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            6554445555566654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.022  Score=51.22  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=53.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC--c-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--T-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga--~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++.  . ..  .|..+  .+.+.+.+.+..  .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            4679999987 8999999999999999 899999988776554 33442  1 11  34433  122323333322  14


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.057  Score=46.38  Aligned_cols=79  Identities=18%  Similarity=0.156  Sum_probs=49.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-H---HhcCCce-EEeCCCCCCccHHHHHHHhcC--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-G---KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~---~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      ++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. +   +..+... ..|..+  .+++.+.+.+...  ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            3679999987 9999999998888899 89999987655322 2   2223322 133332  1222222222221  37


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|++.+.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            8999998763

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.36  E-value=0.17  Score=36.81  Aligned_cols=85  Identities=26%  Similarity=0.289  Sum_probs=55.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC---CCEEEEE-cCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG---ATRIIGV-DVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G---~~~Vi~~-~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +|.|+|+|.+|.+.++-....|   . +|+.+ .+++++.+.+ ++++.. +..      .+..+.+++     .|+||-
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~~-----advvil   67 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQE-----ADVVIL   67 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHHH-----TSEEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhcc-----CCEEEE
Confidence            5778899999999999988888   6 78844 8999888776 446643 221      133444443     699999


Q ss_pred             cCCCHHHHHHHHHH---hhcCCcEEEEe
Q 019535          230 CVGLASLVQEAYAC---CRKGWGKTIVL  254 (339)
Q Consensus       230 ~~g~~~~~~~~~~~---l~~~~G~~v~~  254 (339)
                      |+.... +...++.   ..++ ..++.+
T Consensus        68 av~p~~-~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred             EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence            998766 4434333   4443 455444

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK04457 spermidine synthase; Provisional

Probab=96.34  E-value=0.057  Score=47.61  Aligned_cols=95  Identities=13%  Similarity=0.148  Sum_probs=66.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC----c--eEEeCCCCCCccHHHHHHHhcCCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga----~--~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      ..+++||++|+|. |..+..+++.....++++++.+++-.+.+++. +.    .  .++.      .+..+.+... .+.
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence            4567899999874 77888888877544899999999998888763 31    1  2222      3444444432 347


Q ss_pred             ccEEE-EcCCC---------HHHHHHHHHHhhcCCcEEEEe
Q 019535          224 ADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       224 ~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +|+|| |....         ...++.+.+.|+++ |.++.-
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            99997 54322         35588999999998 998773

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.34  E-value=0.041  Score=47.91  Aligned_cols=103  Identities=16%  Similarity=0.217  Sum_probs=69.5

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      ....+....++||-+|.+ +|..++.+|+.++  . +++.++.+++..+.+++    .|...-++...   .+..+.+.+
T Consensus        72 ~~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~  146 (247)
T PLN02589         72 NMLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQ  146 (247)
T ss_pred             HHHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHH
Confidence            334455567899999974 5888888888773  4 89999999988777644    46333233333   455565655


Q ss_pred             hc-----CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEE
Q 019535          219 MT-----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       219 ~~-----~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~  253 (339)
                      +.     .+.||+|| |+--.  ...++.++++++++ |.++.
T Consensus       147 l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        147 MIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             HHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence            43     24899998 65532  34478889999997 77654

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.033  Score=47.60  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=52.5

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+.. ...|..+  .+.+.+.+.+...+++|++|.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence            46899986 8999999988888899 899999988877777665543 2334443  12233322233223799999987


Q ss_pred             CC
Q 019535          232 GL  233 (339)
Q Consensus       232 g~  233 (339)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            64

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.31  E-value=0.072  Score=45.86  Aligned_cols=92  Identities=23%  Similarity=0.237  Sum_probs=60.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCC--EEEEEcCC----hhH--------HHHHHhcCCceEEeCCCCCCccHHHHH
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~--~Vi~~~~~----~~~--------~~~~~~~ga~~vi~~~~~~~~~~~~~l  216 (339)
                      -.+.+++|+|+|..|..++..+...|++  +++.++++    .++        .++++.++... .   +   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence            3568999999999999999999999997  89999987    343        22334433211 0   1   1333333


Q ss_pred             HHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .     .+|++|++++.....+..++.+.++ ..+..+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence            2     3899999997433234667777775 6555544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.023  Score=49.63  Aligned_cols=79  Identities=23%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc----eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT----EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~----~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.++++++..+...++...    ...|..+  .+.+.+.+.+...  +++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999987 8999999998888999 899999887655544443211    1233332  1223232322221  378


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|.++|.
T Consensus        91 d~vi~~ag~   99 (255)
T PRK06841         91 DILVNSAGV   99 (255)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.30  E-value=0.061  Score=51.39  Aligned_cols=78  Identities=26%  Similarity=0.394  Sum_probs=50.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHH-HHhcCCc-eEEeCCCCCCccHHHHHHH-hc--CCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEI-GKRFGVT-EFVNSKNCGDKSVSQIIID-MT--DGG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~-~~~~ga~-~vi~~~~~~~~~~~~~l~~-~~--~g~  223 (339)
                      ++.++||.|+ |.+|...++.+...|+ +|+.+++++  ++.+. .++++.. ..+|..+   .+-.+.+.+ ..  .++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCCC
Confidence            4688999987 9999999999999999 888887643  22222 2345543 2345444   332333322 21  137


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|++.|.
T Consensus       285 id~vi~~AG~  294 (450)
T PRK08261        285 LDIVVHNAGI  294 (450)
T ss_pred             CCEEEECCCc
Confidence            9999999883

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.30  E-value=0.011  Score=51.31  Aligned_cols=106  Identities=18%  Similarity=0.259  Sum_probs=67.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc-eE-EeCCCCCCccHHH-H
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQ-I  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~-~v-i~~~~~~~~~~~~-~  215 (339)
                      +...+++.+|++|+-.|.|. |.++..+++..|. .+|+..+.++++.+.+++    .|.. .+ +...+     +.+ .
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D-----v~~~g  105 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD-----VCEEG  105 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG-
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc-----eeccc
Confidence            55678999999999998764 7788888888763 389999999988877743    4543 22 22222     211 1


Q ss_pred             HHHhcCCCccEEE-EcCCCHHHHHHHHHHh-hcCCcEEEEecc
Q 019535          216 IIDMTDGGADYCF-ECVGLASLVQEAYACC-RKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~~g~~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~  256 (339)
                      ..+-....+|.|| |--.-...+..+.+.| +++ |+++.+..
T Consensus       106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            1111123689997 6555555699999999 887 99988853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.031  Score=50.20  Aligned_cols=78  Identities=22%  Similarity=0.298  Sum_probs=51.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      +.++||.|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.. ..  .|..+  .+.+.+.+.+..  .+
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRIG  116 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            578999987 8999999998888999 99999998876554422    2322 22  23322  122323333221  23


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|++|+++|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.028  Score=49.63  Aligned_cols=78  Identities=24%  Similarity=0.272  Sum_probs=52.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC-Cc-eEEeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g-a~-~vi~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      +.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +.++ .. ...|..+  .+.+.+.+.....  +++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            568999987 8999999998888999 899999888776554 3344 22 1234333  2233333333221  47999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|++.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9998874

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.037  Score=48.57  Aligned_cols=81  Identities=23%  Similarity=0.322  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcc-C-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCceE----EeCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~-G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~~v----i~~~~~~~~~~~~~l~~  218 (339)
                      +..++++||.|+ | ++|.++++.+...|+ +|+++++++++.+...+     ++...+    .|..+  .+.+.+.+.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence            345789999986 6 799999999999999 89998887766544322     343222    23333  1222222222


Q ss_pred             hc--CCCccEEEEcCCC
Q 019535          219 MT--DGGADYCFECVGL  233 (339)
Q Consensus       219 ~~--~g~~d~v~d~~g~  233 (339)
                      ..  .+++|++|++.|.
T Consensus        91 ~~~~~g~id~li~~ag~  107 (262)
T PRK07831         91 AVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1478999999984

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.28  E-value=0.049  Score=50.97  Aligned_cols=91  Identities=23%  Similarity=0.308  Sum_probs=60.1

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh--cC--Cc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          156 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~--~g--a~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      |+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+  .+  .. ..+|..+      .+.+.++.. +.|+|++
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence            68999999999999998877643 79999999998777653  22  11 2344333      223455433 4699999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+|.......+..|+..+ -.+++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             CCccchhHHHHHHHHHhC-CCeecc
Confidence            999876566777777776 777774

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09186 flagellin modification protein A; Provisional

Probab=96.27  E-value=0.074  Score=46.33  Aligned_cols=78  Identities=21%  Similarity=0.320  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc----CCc---e-EEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVT---E-FVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~----ga~---~-vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++||.|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++    +..   . ..|..+  .+.+.+.+.+...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 899999887765543 222    221   1 224333  2233333333222


Q ss_pred             --CCccEEEEcCC
Q 019535          222 --GGADYCFECVG  232 (339)
Q Consensus       222 --g~~d~v~d~~g  232 (339)
                        +++|++|++.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence              36899999875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.27  E-value=0.029  Score=49.29  Aligned_cols=79  Identities=22%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      ++.++||.|+ +.+|...++.+...|+ +|+.+++++++.+.+.+ ++.. .+  .|..+  ..++.+.+.+..  .+.+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence            4678999987 8999999999999999 89999998877666543 3321 12  23333  122333333322  2379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        82 d~li~~ag~   90 (263)
T PRK06200         82 DCFVGNAGI   90 (263)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.076  Score=46.92  Aligned_cols=76  Identities=20%  Similarity=0.280  Sum_probs=48.7

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc----eEEeCCCCCCccHHHHHHHhc--CCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT----EFVNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~----~vi~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      +++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+    +..+..    ...|..+  .+.+.+.+.+..  .++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence            6899987 8999999998888999 899988877654433    223332    1244443  122222222221  136


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|++.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.25  E-value=0.028  Score=45.13  Aligned_cols=96  Identities=22%  Similarity=0.219  Sum_probs=60.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce-EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ..+.+++|+|+|.+|...++.+...|..+|+++++++++.+.+ +.++... ....     .+..+.     -+.+|+|+
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi   86 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII   86 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence            4568899999999999999988888643899999888776554 4455321 0111     111111     13689999


Q ss_pred             EcCCCHHH----HHHHHHHhhcCCcEEEEeccC
Q 019535          229 ECVGLASL----VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       229 d~~g~~~~----~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .|++....    .......++++ ..++.++..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~  118 (155)
T cd01065          87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN  118 (155)
T ss_pred             eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence            99886541    11222345665 666666543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.031  Score=49.12  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=51.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHH-HHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVS-QIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~-~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+    .+.. .+  .|..+   .+.. +.+.+..  
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~   84 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH---PEATAGLAGQAVEA   84 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC---HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 99999998776554422    2321 22  33333   3322 2222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|++|+++|.
T Consensus        85 ~~~id~vi~~Ag~   97 (263)
T PRK07814         85 FGRLDIVVNNVGG   97 (263)
T ss_pred             cCCCCEEEECCCC
Confidence            1379999998873

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.038  Score=48.22  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=49.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-e--EEeCCCCCCccHHHHHHHhcCCCc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--FVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~--vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+++++++++.+.++.    .+.. .  ..|..+   .   +.+.....+++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcCCC
Confidence            457999987 8999999999999999 89999988766554432    2321 1  223333   1   23333333479


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++|++.|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.21  E-value=0.049  Score=44.01  Aligned_cols=88  Identities=18%  Similarity=0.134  Sum_probs=56.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|+|+|+|.+|.--++.+...|+ +|.+++  ++..+.+++++... +..+.+...+         -.++|+||-++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~~~~~d---------l~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKTFSNDD---------IKDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecccChhc---------CCCceEEEECC
Confidence            57889999999999988888888999 888874  44444444554222 2222211111         12689999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEe
Q 019535          232 GLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +... .+.....++.. +.++..
T Consensus        79 ~d~e-~N~~i~~~a~~-~~~vn~   99 (157)
T PRK06719         79 NQHA-VNMMVKQAAHD-FQWVNV   99 (157)
T ss_pred             CCHH-HHHHHHHHHHH-CCcEEE
Confidence            9988 66666656554 434443

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.19  E-value=0.022  Score=48.16  Aligned_cols=92  Identities=16%  Similarity=-0.005  Sum_probs=56.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|||+|+|.+|...++.+...|+ +|+++.+... ....+...+... +....     +.+.  .  -.++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~--l~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--D--IVDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--h--cCCceEEEEc
Confidence            46799999999999999988888998 8888875432 112221222111 11121     1110  0  1268999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++.+. .+..+...+.. +.++....
T Consensus        78 T~d~e-lN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         78 TNDPR-VNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence            99988 55555544454 56665544

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.19  E-value=0.039  Score=46.70  Aligned_cols=93  Identities=17%  Similarity=0.173  Sum_probs=61.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|||+|+|.+|..-++.+...|+ +|++++.... ....+.+.|.-..+. .+     +....  +  .++++||-+
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~d--l--~~~~lVi~a   76 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDADI--L--EGAFLVIAA   76 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHHH--h--CCcEEEEEC
Confidence            46799999999999999999999999 8888876543 233333334222222 22     11111  1  268999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++.+..-.......... |..+....
T Consensus        77 t~d~~ln~~i~~~a~~~-~ilvn~~d  101 (205)
T TIGR01470        77 TDDEELNRRVAHAARAR-GVPVNVVD  101 (205)
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence            99987555666666665 77776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.18  E-value=0.15  Score=41.19  Aligned_cols=80  Identities=26%  Similarity=0.283  Sum_probs=49.0

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC--hhHHHHH----HhcCCc-eEEeCCCCCCccHHHHHHHhc--CCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~--~~~~~~~----~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      +++||.|+ +++|...++.+...|..+|+.+.++  .++.+.+    +..+.. .++..+-...+++.+.+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36899987 8999999988888877688888887  3433332    334432 223222111233333344333  238


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.17  E-value=0.05  Score=47.21  Aligned_cols=78  Identities=23%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      ++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    +..+.. .  ..|..+  ...+.+.+.....  
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 899999887655443    223432 1  223222  1222232333222  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        81 ~~id~vi~~ag   91 (253)
T PRK08217         81 GQLNGLINNAG   91 (253)
T ss_pred             CCCCEEEECCC
Confidence            36899999887

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.17  E-value=0.058  Score=48.07  Aligned_cols=43  Identities=23%  Similarity=0.220  Sum_probs=37.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  194 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  194 (339)
                      .+.+++|+|+|+.+++++.-+...|+++++++.++.++.+.+.
T Consensus       126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            4678999999999999998888899989999999988766653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.16  E-value=0.034  Score=48.83  Aligned_cols=78  Identities=17%  Similarity=0.178  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+++++|.|+ |.+|...++.+...|+ +|+.++++.++.+.+++ .+.. ..  .|..+  .....+.+.+...  +.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999987 8999999999989999 89999988777666544 2321 11  23332  1223333333222  378


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++|++.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.16  E-value=0.093  Score=47.61  Aligned_cols=94  Identities=11%  Similarity=0.097  Sum_probs=60.7

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE-eCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|||.|+ |-+|...++.+...|. +|.+++++.++...+...++..+. |..+   .   +.+.+... ++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence            6999987 9999999999888999 899999887666555555654332 2222   1   22333222 5899999875


Q ss_pred             CH------------HHHHHHHHHhhcCCc--EEEEeccC
Q 019535          233 LA------------SLVQEAYACCRKGWG--KTIVLGVD  257 (339)
Q Consensus       233 ~~------------~~~~~~~~~l~~~~G--~~v~~g~~  257 (339)
                      ..            .....+++.+... |  ++|.++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~  111 (317)
T CHL00194         74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL  111 (317)
T ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence            31            1123455555553 4  78877753

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.035  Score=48.46  Aligned_cols=79  Identities=22%  Similarity=0.220  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+..    .+..   ...|..+  .+.+.+.+.+..  -
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999999999999 89999988776554422    2321   1233333  122333333222  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++++.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            479999998774

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.03  Score=49.70  Aligned_cols=78  Identities=18%  Similarity=0.222  Sum_probs=51.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-e--EEeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-E--FVNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a~-~--vi~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.... .. .  ..|..+  .+.+.+.+.....  +++|
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCCC
Confidence            567999987 9999999999888999 8999999888776655432 11 1  223333  1222222232221  3689


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      +++++.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=96.14  E-value=0.073  Score=49.17  Aligned_cols=60  Identities=20%  Similarity=0.203  Sum_probs=44.9

Q ss_pred             CccccccccchhhhhhHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      ...+|....+.+.+- . +.+..+. -.|.+|.|.|-|.+|+.+++.+...|+ +|++++.++.
T Consensus       181 ~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         181 GRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             CCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            345566555544444 2 3344444 489999999999999999999999999 8999987776

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.13  E-value=0.02  Score=50.98  Aligned_cols=96  Identities=17%  Similarity=0.091  Sum_probs=61.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ..+.+++|+|+|++|++++..+...|+.+|+++.++.++.+.+.+ ++....+.. .   .+..+.     -..+|+||+
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~-----~~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEE-----LADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhc-----cccCCEEEE
Confidence            356789999999999999999999996699999999887765543 332110111 1   011111     125899999


Q ss_pred             cCCCHHH-----HHHHHHHhhcCCcEEEEecc
Q 019535          230 CVGLASL-----VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       230 ~~g~~~~-----~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |++....     .......+.+. ..++++-.
T Consensus       192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            9875320     11234566775 67777654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.13  E-value=0.025  Score=50.22  Aligned_cols=44  Identities=34%  Similarity=0.341  Sum_probs=39.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      .+++++|+|+|+.+++++.-+...|+++|+++.|+.++.+.+.+
T Consensus       125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            47899999999999999999999998799999999988777654

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.053  Score=47.48  Aligned_cols=81  Identities=23%  Similarity=0.293  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhH-HHH----HHhcCC--ceE--EeCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FEI----GKRFGV--TEF--VNSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~-G~~~Vi~~~~~~~~-~~~----~~~~ga--~~v--i~~~~~~~~~~~~~l~~  218 (339)
                      +..+.++||.|+ |++|...++-+... |+ +|+.+++++++ .+.    ++..+.  .++  .|..+  ..++.+.+++
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~   81 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA   81 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence            556789999987 89999999877666 47 89999887764 332    233332  122  33332  1233333333


Q ss_pred             hcC-CCccEEEEcCCC
Q 019535          219 MTD-GGADYCFECVGL  233 (339)
Q Consensus       219 ~~~-g~~d~v~d~~g~  233 (339)
                      ... +++|+++.+.|.
T Consensus        82 ~~~~g~id~li~~ag~   97 (253)
T PRK07904         82 AFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHhcCCCCEEEEeeec
Confidence            332 489999987754

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.11  E-value=0.047  Score=50.82  Aligned_cols=95  Identities=17%  Similarity=0.169  Sum_probs=64.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.++||+|+|-+|..++..+...|..+|+...|+.++.+. ++++|+. ++..+     ++.+.+.     .+|+||.+
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l~-----~~DvViss  245 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEALA-----EADVVISS  245 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhhh-----hCCEEEEe
Confidence            57889999999999999999999998899999999887654 5678843 33222     2333332     48999999


Q ss_pred             CCCHHH---HHHHHHHhhcCCc-EEEEeccC
Q 019535          231 VGLASL---VQEAYACCRKGWG-KTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~---~~~~~~~l~~~~G-~~v~~g~~  257 (339)
                      ++.+..   -......+..... -+++++.+
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            887542   2233334444312 35556543

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.036  Score=48.34  Aligned_cols=78  Identities=23%  Similarity=0.261  Sum_probs=50.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFV--NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi--~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.+    .+. ...+  |..+  .+.+.+.+.+...  +
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            467899987 8999999999999999 89999988766554432    222 1222  3322  2233333333221  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|+++++.|.
T Consensus        78 ~id~lI~~ag~   88 (252)
T PRK07677         78 RIDALINNAAG   88 (252)
T ss_pred             CccEEEECCCC
Confidence            68999998863

>PRK06196 oxidoreductase; Provisional

Probab=96.08  E-value=0.043  Score=49.73  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC-Cc-eEEeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VT-EFVNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g-a~-~vi~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+++++++++.+.+. ++. .. ...|..+  .+.+.+.+.+...  +++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence            3578999987 8999999998888999 8999999877655432 222 21 1233333  1223333333322  3799


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|+++|.
T Consensus       102 ~li~nAg~  109 (315)
T PRK06196        102 ILINNAGV  109 (315)
T ss_pred             EEEECCCC
Confidence            99998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.08  E-value=0.052  Score=47.08  Aligned_cols=79  Identities=16%  Similarity=0.275  Sum_probs=50.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      .++++||.|+ |.+|...++.+...|+ +|+.+++++.  ..+.+++.+.. .+  .|..+  .+.+.+.+++...  ++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence            4688999987 8999999999989999 8999987652  12333444422 22  23333  2333333333221  36


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+++++.|.
T Consensus        81 ~d~li~~ag~   90 (248)
T TIGR01832        81 IDILVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            9999998864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.08  E-value=0.31  Score=42.58  Aligned_cols=101  Identities=14%  Similarity=0.216  Sum_probs=64.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +.+.....++.+||-+|+|. |..+..+++ .|. ++++++.+++..+.+++... ..++..+-   ..+     ....+
T Consensus        34 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~  102 (251)
T PRK10258         34 LLAMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATA  102 (251)
T ss_pred             HHHhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCC
Confidence            33444445678899999875 666655554 577 99999999999888876542 22222111   110     11223


Q ss_pred             CccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVG------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .||+|+....      -...+.++.+.|+++ |.++....
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            7999986432      234588899999997 99887643

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.053  Score=47.78  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-e--EEeCCCCCCccHHHHHHHhc-C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-E--FVNSKNCGDKSVSQIIIDMT-D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~-~--vi~~~~~~~~~~~~~l~~~~-~  221 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +.. .  ..|..+  .+++.+.+.+.. -
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence            4678999987 8999999999999999 89999988776554432 1    321 1  233333  223333333322 1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            479999998874

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.046  Score=47.68  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.    ..+.. ..+  |..+  .+...+.+.+...  
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF   81 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            3578999987 8999999999889999 8999998877665442    23322 222  3332  1222222332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        82 ~~id~li~~ag~   93 (254)
T PRK07478         82 GGLDIAFNNAGT   93 (254)
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.03  E-value=0.067  Score=45.75  Aligned_cols=95  Identities=18%  Similarity=0.238  Sum_probs=63.1

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce--EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      -++.+||-+|+|+ |+++..+| ..|+ .|++++.+++..+.++.-....  -+++..    ...+.+... ++.||+|+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~  129 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT  129 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence            3788999999863 55555554 4578 9999999999998887532211  144543    333333332 14899997


Q ss_pred             E-----cCCCHH-HHHHHHHHhhcCCcEEEEe
Q 019535          229 E-----CVGLAS-LVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       229 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~  254 (339)
                      .     -+..+. .+..+.+.++|+ |.+...
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S  160 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLS  160 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence            4     455543 478899999997 876655

>PRK07574 formate dehydrogenase; Provisional

Probab=96.03  E-value=0.072  Score=49.56  Aligned_cols=89  Identities=21%  Similarity=0.219  Sum_probs=55.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+..+.+|+...        .++.+.+.     ..|+|+-+.
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~l  256 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS-----VCDVVTIHC  256 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh-----cCCEEEEcC
Confidence            46789999999999999999999999 99999987533333334443211        12222221     257777666


Q ss_pred             CCHHHH-----HHHHHHhhcCCcEEEEec
Q 019535          232 GLASLV-----QEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~~~-----~~~~~~l~~~~G~~v~~g  255 (339)
                      +.....     ...+..|+++ ..+|.++
T Consensus       257 Plt~~T~~li~~~~l~~mk~g-a~lIN~a  284 (385)
T PRK07574        257 PLHPETEHLFDADVLSRMKRG-SYLVNTA  284 (385)
T ss_pred             CCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence            532212     2345566665 5555554

>PRK06484 short chain dehydrogenase; Validated

Probab=96.02  E-value=0.11  Score=50.55  Aligned_cols=102  Identities=23%  Similarity=0.255  Sum_probs=67.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++..   ...|..+  .+.+.+.+.+...  +.+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            5788999987 8999999999999999 99999998877766543 4432   1234333  2233333333322  379


Q ss_pred             cEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |++|+++|..                          ...+.++..+..+ |+++.++..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~  402 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI  402 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            9999988741                          0134445566665 899988754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.01  E-value=0.043  Score=48.61  Aligned_cols=78  Identities=18%  Similarity=0.219  Sum_probs=49.2

Q ss_pred             CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|++   ++|.+.++.+...|+ +|+.+.++.+..+.+    +++|....  .|..+  .+.+.+.+.+... 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence            46789999874   899999999999999 888888764322222    23453322  23333  2233333333322 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +.+|++++++|
T Consensus        83 ~g~iD~lVnnAG   94 (271)
T PRK06505         83 WGKLDFVVHAIG   94 (271)
T ss_pred             hCCCCEEEECCc
Confidence             47999999887

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.01  E-value=0.23  Score=43.81  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=59.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------H----HHHHHhcCC-ceEEeCCCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGV-TEFVNSKNC  207 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~----~~~~~~~ga-~~vi~~~~~  207 (339)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+.-                   |    .+.++++.. ..+...++.
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            4578999999999999999999999888888876521                   1    111122221 122222220


Q ss_pred             CCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          208 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       208 ~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .   ..+.+.++....+|+||||++....-..+.+.+....-.++..+..
T Consensus       109 i---~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 I---TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             c---ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence            0   1122333333379999999998654444455544431345555443

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.01  E-value=0.038  Score=47.81  Aligned_cols=120  Identities=23%  Similarity=0.417  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l  216 (339)
                      +.+....+++.+||-+|+|. |..+..+++..+. .+|++++.+++.++.+++    .+..  ..+..+.   +++    
T Consensus        39 ~~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l----  110 (233)
T PF01209_consen   39 LIKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL----  110 (233)
T ss_dssp             HHHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB-----
T ss_pred             HHhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh----
Confidence            34445678899999998763 7788888888763 289999999999888864    2321  1222221   121    


Q ss_pred             HHhcCCCccEEEEcCCC------HHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhc
Q 019535          217 IDMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  273 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  273 (339)
                       ...++.||+|.-+.|-      ...++++.+.|+|+ |+++.+....+....-.....++.+
T Consensus       111 -p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~~~~~~~~~~~y~~  171 (233)
T PF01209_consen  111 -PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPRNPLLRALYKFYFK  171 (233)
T ss_dssp             --S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-SSHHHHHHHHH---
T ss_pred             -cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCCCchhhceeeeeec
Confidence             1112369999865542      44589999999998 9999888764433322233344443

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.00  E-value=0.031  Score=49.90  Aligned_cols=76  Identities=13%  Similarity=0.025  Sum_probs=51.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .+.+++|+|+|+.|++++.-+..+|+++|+++.|++++.+.+. .++.. .+....      ..+.+... ...+|+||+
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~-~~~~DiVIn  196 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAI-EKAAEVLVS  196 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhc-ccCCCEEEE
Confidence            5778999999999999999999999988999999988776653 34321 111111      00111111 125899999


Q ss_pred             cCCCH
Q 019535          230 CVGLA  234 (339)
Q Consensus       230 ~~g~~  234 (339)
                      |++..
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            98753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02823 spermine synthase

Probab=95.99  E-value=0.079  Score=48.37  Aligned_cols=101  Identities=18%  Similarity=0.126  Sum_probs=62.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-eEEeCCCC--CCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-EFVNSKNC--GDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a~-~vi~~~~~--~~~~~~~~l~~~~~g~~d~v  227 (339)
                      ..++|||+|+|. |..+..+++..+.++|++++.+++-.+.++++- .. ..++....  ...|-.+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899998763 566667777666668999999999988887632 10 00100000  01334444533 33489999


Q ss_pred             E-EcCC----C-------HHHHH-HHHHHhhcCCcEEEEec
Q 019535          228 F-ECVG----L-------ASLVQ-EAYACCRKGWGKTIVLG  255 (339)
Q Consensus       228 ~-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~g  255 (339)
                      | |+..    +       .+-++ .+.+.|+++ |.++.-.
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~  220 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA  220 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence            8 6432    1       12255 788899998 9887653

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.046  Score=48.02  Aligned_cols=79  Identities=23%  Similarity=0.283  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----c-CCc---eEEeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----F-GVT---EFVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~-ga~---~vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ +.+|.+.++.+...|+ +|+.+++++++.+.+.+     . +..   ...|..+  .+.+.+.+.+.. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 89999998876554321     1 111   1224333  122323333322 


Q ss_pred             -CCCccEEEEcCCC
Q 019535          221 -DGGADYCFECVGL  233 (339)
Q Consensus       221 -~g~~d~v~d~~g~  233 (339)
                       -+++|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence             1379999999874

>PRK05717 oxidoreductase; Validated

Probab=95.96  E-value=0.053  Score=47.36  Aligned_cols=79  Identities=18%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.++.. .  ..|..+  ...+.+.+.+...  +++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            3678999987 9999999999988999 899988776554443 334422 1  233333  1223222333322  368


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.95  E-value=0.11  Score=45.64  Aligned_cols=100  Identities=19%  Similarity=0.164  Sum_probs=67.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +.....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++..      +..    .+...
T Consensus        23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~   91 (258)
T PRK01683         23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPP   91 (258)
T ss_pred             HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCC
Confidence            34455667889999999863 7777888877743499999999998888866422 122221      211    11222


Q ss_pred             -CccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          223 -GADYCFECVG------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       223 -~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .+|+|+....      ....++.+.+.|+++ |.++...
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence             7999975332      234588899999998 9988753

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.95  E-value=0.071  Score=46.59  Aligned_cols=79  Identities=22%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+... .  .|..+  ...+.+.+....  .
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3678999987 9999999999999999 899999887654433    3344332 1  22222  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.+.|.
T Consensus        83 ~~~d~vi~~ag~   94 (262)
T PRK13394         83 GSVDILVSNAGI   94 (262)
T ss_pred             CCCCEEEECCcc
Confidence            368999998874

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.94  E-value=0.14  Score=46.73  Aligned_cols=94  Identities=18%  Similarity=0.101  Sum_probs=63.6

Q ss_pred             CCCCEEEEEccCHHHHHHHHH-HHHcCCCEEEEEcCChhHHHHHH-h----cCCceEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEG-ARLCGATRIIGVDVISEKFEIGK-R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~l-a~~~G~~~Vi~~~~~~~~~~~~~-~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ....+++|+|+|..|...+.. +...++++|.++++++++.+.+. +    ++.. +...     .++.+.+     ...
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~a  193 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EEA  193 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hcC
Confidence            456789999999999877654 45668889999999988765543 2    2432 2112     2333333     248


Q ss_pred             cEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          225 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       225 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+|+.|+++...+ .. +.++++ -+++.+|...
T Consensus       194 DiVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        194 DIIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             CEEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence            9999999877633 34 788886 7777888654

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.94  E-value=0.11  Score=45.67  Aligned_cols=97  Identities=23%  Similarity=0.145  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc-C
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-D  221 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~-~  221 (339)
                      +.......++.+||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+...+.       .+..    ++. .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence            45556677889999999874 77777787775 55 899999999988888776543221       1221    122 2


Q ss_pred             CCccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEe
Q 019535          222 GGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       222 g~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.||+|+...     .. ...++.+.+.|+++ |.++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            3799998533     22 44578889999998 998765

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.056  Score=46.84  Aligned_cols=79  Identities=22%  Similarity=0.240  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      ++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++.. ..  .|..+  ..+..+.+....  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            3678999987 9999999999999999 899999887665444 345532 12  23222  122222222221  2378


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|++.|.
T Consensus        82 d~vi~~ag~   90 (249)
T PRK06500         82 DAVFINAGV   90 (249)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06128 oxidoreductase; Provisional

Probab=95.91  E-value=0.14  Score=46.04  Aligned_cols=102  Identities=23%  Similarity=0.171  Sum_probs=60.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--H----HHHHhcCCce-E--EeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F----EIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~----~~~~~~ga~~-v--i~~~~~~~~~~~~~l~~~~-  220 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+.+.++.+.  .    +.++..|... +  .|..+  .+.+.+.+.+.. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  130 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK  130 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999988999 88777654321  1    2233344322 2  23332  122223333222 


Q ss_pred             -CCCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          221 -DGGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 -~g~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       -+++|++|+++|..                          ...+.+++.+..+ |+++.++..
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~  193 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI  193 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence             13799999988731                          1233444555665 898888653

>PLN03075 nicotianamine synthase; Provisional

Probab=95.90  E-value=0.071  Score=47.54  Aligned_cols=98  Identities=13%  Similarity=0.119  Sum_probs=65.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcC-----CceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~g-----a~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      .+++|+-+|+|+.+..++.+++.+.. .+++.++.+++..+.+++.-     ...-+....   .+..+...  ..+.||
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~FD  197 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEYD  197 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCcC
Confidence            77899999999989988888866532 27999999999888887632     112122222   23322110  124799


Q ss_pred             EEEEcC-------CCHHHHHHHHHHhhcCCcEEEEec
Q 019535          226 YCFECV-------GLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       226 ~v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +||-.+       .....++...+.|+++ |.++.=.
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            998544       2345588999999997 8766543

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.90  E-value=0.05  Score=49.53  Aligned_cols=80  Identities=18%  Similarity=0.170  Sum_probs=53.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cC-Cc---eEEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT---EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~g-a~---~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.+++|.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+     .+ ..   ..+|..+ ...+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            4789999987 8999999988888899 89999999887665422     22 11   1234332 11233445555555


Q ss_pred             C-CccEEEEcCCC
Q 019535          222 G-GADYCFECVGL  233 (339)
Q Consensus       222 g-~~d~v~d~~g~  233 (339)
                      + .+|++++++|.
T Consensus       130 ~~didilVnnAG~  142 (320)
T PLN02780        130 GLDVGVLINNVGV  142 (320)
T ss_pred             CCCccEEEEecCc
Confidence            5 67799988763

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.90  E-value=0.12  Score=40.94  Aligned_cols=32  Identities=28%  Similarity=0.453  Sum_probs=28.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +|+|+|+|++|...++.+...|.+++..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48999999999999999999999888888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.89  E-value=0.06  Score=47.19  Aligned_cols=76  Identities=20%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceE--EeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      ++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..+.  .|..+  .+.+.+.+.+...  +++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence            5899987 8999999999888999 8999998877654432    2232222  23322  1233333333222  3799


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|++.|.
T Consensus        79 ~li~naG~   86 (259)
T PRK08340         79 ALVWNAGN   86 (259)
T ss_pred             EEEECCCC
Confidence            99998874

>PLN03139 formate dehydrogenase; Provisional

Probab=95.89  E-value=0.092  Score=48.85  Aligned_cols=89  Identities=19%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+..+..|+..+        .++.+.+.     ..|+|+-+.
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~sDvV~l~l  263 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP-----KCDVVVINT  263 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh-----hCCEEEEeC
Confidence            57899999999999999999999999 89999876544443344443211        12222221     256776655


Q ss_pred             CCHHHH-----HHHHHHhhcCCcEEEEec
Q 019535          232 GLASLV-----QEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~~~-----~~~~~~l~~~~G~~v~~g  255 (339)
                      +.....     ...+..|+++ ..+|.++
T Consensus       264 Plt~~T~~li~~~~l~~mk~g-a~lIN~a  291 (386)
T PLN03139        264 PLTEKTRGMFNKERIAKMKKG-VLIVNNA  291 (386)
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence            532211     2345566664 5555554

>PLN02244 tocopherol O-methyltransferase

Probab=95.88  E-value=0.056  Score=49.64  Aligned_cols=95  Identities=21%  Similarity=0.273  Sum_probs=63.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc---eEEeCCCCCCccHHHHHHHhcCCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~---~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +++++||-+|+|. |..+..+++..|+ +|++++.++...+.+++.    |..   .++..+.   .++     .+..+.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence            6788999999874 6777888888888 999999999877766542    321   1221111   110     112247


Q ss_pred             ccEEEEcCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          224 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ||+|+....     . ...++++.+.|+++ |++++...
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            999985322     1 34578999999998 99988653

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.88  E-value=0.093  Score=46.60  Aligned_cols=99  Identities=13%  Similarity=0.161  Sum_probs=66.1

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCce-EE-eCCC-CCCccHHHHHHHhcCCCccEEE-
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE-FV-NSKN-CGDKSVSQIIIDMTDGGADYCF-  228 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~-vi-~~~~-~~~~~~~~~l~~~~~g~~d~v~-  228 (339)
                      .+|||+|+|. |..+-.+++....+++++++.+++=.+.++++ +... -. |.+- ....|-.+.+++... ++|+|| 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence            5999998654 56666778888788999999999988888763 2111 00 1110 001344455554433 799998 


Q ss_pred             EcCCC---------HHHHHHHHHHhhcCCcEEEEec
Q 019535          229 ECVGL---------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       229 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+...         ..-.+.+.++|+++ |.++.-+
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~  190 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA  190 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence            65543         45588999999998 9988874

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.88  E-value=0.049  Score=52.33  Aligned_cols=78  Identities=24%  Similarity=0.332  Sum_probs=54.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hHHHHHHhcCCceEEeCCCCCCc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK  210 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~---------------------~~~~~~~~~ga~~vi~~~~~~~~  210 (339)
                      .+++|+|+|+|+.|+.++..++..|+ +|+.++..+                     ...++++++|.+..++..-.  .
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence            57899999999999999999999999 788887653                     23566778887655544220  1


Q ss_pred             cHHHHHHHhcCCCccEEEEcCCCHH
Q 019535          211 SVSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       211 ~~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      ++  .+..+. ..+|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            11  111111 26999999998743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PLN00203 glutamyl-tRNA reductase

Probab=95.88  E-value=0.048  Score=52.75  Aligned_cols=73  Identities=18%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC-Cce-EEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g-a~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.+|+|+|+|.+|.++++.+...|+++|+++.++.++.+.+. .++ ... +...     .+..+.+     ..+|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al-----~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA-----AEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH-----hcCCEEEE
Confidence            688999999999999999999999878999999988876654 353 221 1111     1222222     25899999


Q ss_pred             cCCCHH
Q 019535          230 CVGLAS  235 (339)
Q Consensus       230 ~~g~~~  235 (339)
                      |++.+.
T Consensus       336 AT~s~~  341 (519)
T PLN00203        336 STSSET  341 (519)
T ss_pred             ccCCCC
Confidence            987543

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.064  Score=47.24  Aligned_cols=78  Identities=19%  Similarity=0.251  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      ++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+..    ...+.. .  .+|..+  ...+.+.+.+..  .
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4779999987 8999999998889999 899999887665433    222322 1  233333  122333333332  2


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|.+.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            37899998875

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.84  E-value=0.053  Score=54.24  Aligned_cols=77  Identities=26%  Similarity=0.286  Sum_probs=55.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCceEEeCCCCCCc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK  210 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~~ga~~vi~~~~~~~~  210 (339)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     +.++++++|++..++..-....
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            47999999999999999999999999 8888876652                     4566677887766554320011


Q ss_pred             cHHHHHHHhcCCCccEEEEcCCCH
Q 019535          211 SVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       211 ~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      .+    .++. ..+|.||.++|..
T Consensus       388 ~~----~~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH-hcCCEEEEeCCCC
Confidence            22    1221 2699999999864

>PRK08643 acetoin reductase; Validated

Probab=95.83  E-value=0.063  Score=46.87  Aligned_cols=78  Identities=17%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      ++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.    ..+.. ..  .|..+  .+.+.+.+.+..  .+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            468899987 8999999999989999 8999998876654432    22322 11  23333  222333333322  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            79999998864

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.078  Score=46.52  Aligned_cols=79  Identities=23%  Similarity=0.334  Sum_probs=50.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CC-ceE--EeCCCCCCccHHHHHHHhc-CCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEF--VNSKNCGDKSVSQIIIDMT-DGG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~--ga-~~v--i~~~~~~~~~~~~~l~~~~-~g~  223 (339)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. +  +. ...  .|..+  .+.+.+...... .+.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence            3578999986 8999999998888999 89999998876655532 2  21 122  22222  122222222211 247


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+++.++|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999998875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.81  E-value=0.067  Score=46.69  Aligned_cols=79  Identities=24%  Similarity=0.319  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+    +..|.. ..  .|..+  .+.+.+.+.+..  .
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999998888899 899999887655433    222322 12  23333  122333332221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.071  Score=46.59  Aligned_cols=80  Identities=19%  Similarity=0.205  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcCCce---EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE---FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~----~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.+++|.|+ |.+|..+++.+...|++.|+++++++++.+    .++..+...   ..|..+  .+.+.+.+....  .
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 899999999999999933999998766544    223334321   233333  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            369999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.067  Score=47.29  Aligned_cols=77  Identities=21%  Similarity=0.329  Sum_probs=49.5

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hh---cC--C-ceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FG--V-TEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~---~g--a-~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.. ++   .+  . ..++  |..+  .+.+.+.+.+... 
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   83 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATAW   83 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            578999987 8999999999999999 899999887654433 22   11  1 1222  3322  1223233333221 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence             37899999887

>PRK08317 hypothetical protein; Provisional

Probab=95.79  E-value=0.13  Score=44.24  Aligned_cols=102  Identities=27%  Similarity=0.392  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~  217 (339)
                      +.+..++.++.+||.+|+|. |..+..+++..+ ..++++++.+++..+.+++.    +. ..+...+.   ...     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            44567788899999999875 888888888773 23899999999888887664    11 11221111   110     


Q ss_pred             HhcCCCccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDGGADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+..+.+|+|+...     . -...++.+.++|+++ |.++...
T Consensus        82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            12223789887421     2 234588999999998 9988765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.79  E-value=0.065  Score=47.02  Aligned_cols=78  Identities=14%  Similarity=0.280  Sum_probs=48.3

Q ss_pred             CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHH---HH-HhcCCceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFE---IG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~---~~-~~~ga~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|++   ++|.++++.+...|+ +|+.+.++.+..+   .+ ++++...++  |..+  .+++.+.+.+... 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   85 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE   85 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence            46789999863   899999999888999 8888887754322   22 233432222  3222  2333333333221 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +.+|++++++|
T Consensus        86 ~g~ld~lv~nAg   97 (258)
T PRK07533         86 WGRLDFLLHSIA   97 (258)
T ss_pred             cCCCCEEEEcCc
Confidence             47999999876

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.78  E-value=0.073  Score=46.57  Aligned_cols=79  Identities=20%  Similarity=0.372  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.    ..+.. ..  .|..+  .+.+.+.+.++..  
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 9999999999888999 8999999877655543    22322 12  23333  2233332333222  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.++|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.78  E-value=0.05  Score=45.67  Aligned_cols=100  Identities=12%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.+.....++.+||.+|+|. |..+..+++ .|. +|++++.+++..+.+++.    +..  +....   .+...  ...
T Consensus        22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc
Confidence            44445555677899999863 677777766 477 999999999877766442    322  11111   11110  011


Q ss_pred             cCCCccEEEEcC-----CC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          220 TDGGADYCFECV-----GL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       220 ~~g~~d~v~d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .+.+|+|+...     ..   ...++.+.+.|+++ |.++.+.
T Consensus        92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence             23699997542     21   34577888899998 9865554

Part of a tellurite-reducing operon tehA and tehB

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.76  E-value=0.071  Score=45.92  Aligned_cols=78  Identities=23%  Similarity=0.308  Sum_probs=50.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhcC--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      +.++||+|+ |.+|...++.+...|. +|+++.+++++.+.+    +..+... .  .|..+  ...+.+.+.+...  +
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence            468999987 9999999998888999 799999987765443    2334322 2  23333  2223333333221  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|.++.++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999998864

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.76  E-value=0.084  Score=46.32  Aligned_cols=94  Identities=22%  Similarity=0.277  Sum_probs=62.7

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc---eEEeCCCCCCccHHHHHHHhcCCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~---~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      ..+.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    |..   .++.      .+..+ +.....+.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~------~d~~~-l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH------CAAQD-IAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE------cCHHH-HhhhcCCC
Confidence            4567899999874 7778888775 77 999999999988887652    321   1221      12222 22223347


Q ss_pred             ccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          224 ADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       224 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +|+|+...     .. ...++.+.+.|+++ |.++.+-
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            99998432     22 34488999999998 9987663

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.089  Score=45.43  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      ...++||.|+ |.+|..++..+...|. +|+++++++++.+.+.    +.+.. .  ..|..+  .+.+...+.....  
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4568999987 9999999999999999 8999999877654442    22221 1  223333  1233233333221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++++.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            369999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.077  Score=45.47  Aligned_cols=74  Identities=19%  Similarity=0.246  Sum_probs=48.7

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +++|.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++++...+ .|..+  .+.+.+.+... .+.+|+++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence            5899987 8999999999888999 899999888776554 33443322 34333  12232322222 23689999876


Q ss_pred             C
Q 019535          232 G  232 (339)
Q Consensus       232 g  232 (339)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            4

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.072  Score=46.27  Aligned_cols=79  Identities=22%  Similarity=0.205  Sum_probs=50.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CCc-eE--EeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EF--VNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~--ga~-~v--i~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+.++.++.+.... +  +.. .+  .|..+  ...+.+.+.+...  +
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG   80 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence            3578999987 9999999988888899 89999988765543322 2  321 22  23222  1222232332221  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|.+.|.
T Consensus        81 ~id~vi~~ag~   91 (252)
T PRK06138         81 RLDVLVNNAGF   91 (252)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.74  E-value=0.044  Score=46.65  Aligned_cols=100  Identities=18%  Similarity=0.174  Sum_probs=64.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~  217 (339)
                      +...++++++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+...  +...+      ..+   
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---  137 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK---  137 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---
Confidence            45567788999999998863 55566666654 3 89999999887766643    34322  22211      111   


Q ss_pred             HhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+.. +.||+|+-........+.+.+.|+++ |+++..-.
T Consensus       138 ~~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~~  176 (212)
T PRK00312        138 GWPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPVG  176 (212)
T ss_pred             CCCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEEc
Confidence            1111 37999986555455577888999997 99876543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.74  E-value=0.17  Score=44.33  Aligned_cols=78  Identities=17%  Similarity=0.261  Sum_probs=47.6

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHH-Hhc-CCc-e--EEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-E--FVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~~-ga~-~--vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .+++++|.|+   +++|.++++.+...|+ +|+.+.++.   ++.+.+ +++ +.. .  ..|..+  .+...+.+.+..
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   82 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK   82 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence            4678999986   5999999988888999 888886543   333333 223 211 1  234333  233333333332


Q ss_pred             C--CCccEEEEcCC
Q 019535          221 D--GGADYCFECVG  232 (339)
Q Consensus       221 ~--g~~d~v~d~~g  232 (339)
                      .  +++|++++++|
T Consensus        83 ~~~g~ld~lv~nag   96 (257)
T PRK08594         83 EEVGVIHGVAHCIA   96 (257)
T ss_pred             HhCCCccEEEECcc
Confidence            2  47999998876

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.73  E-value=0.029  Score=44.83  Aligned_cols=90  Identities=21%  Similarity=0.218  Sum_probs=54.9

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-------EeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-------VNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-------i~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      |+|+|+|++|...+..++..|. +|..+.+.+ +.+.+++.|....       +....    .....  ....+.+|++|
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~D~vi   72 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPI----VISAP--SADAGPYDLVI   72 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEE----EESSH--GHHHSTESEEE
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceeccccc----ccCcc--hhccCCCcEEE
Confidence            6899999999999888888999 899999877 7777766552111       11100    00000  11123799999


Q ss_pred             EcCCCHHHHHHHHH----HhhcCCcEEEEec
Q 019535          229 ECVGLASLVQEAYA----CCRKGWGKTIVLG  255 (339)
Q Consensus       229 d~~g~~~~~~~~~~----~l~~~~G~~v~~g  255 (339)
                      -|+-... .+.+++    .+.++ ..++.+-
T Consensus        73 v~vKa~~-~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   73 VAVKAYQ-LEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             E-SSGGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred             EEecccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence            9997655 344444    44443 4555553

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.072  Score=46.46  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|+..++.+...|+ +|+.+++++++.+.+.+    .+..   ...|..+  .+.+...+.+...  
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 89999988766544422    2321   2233332  1223333333221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +.+|++|.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            368999998863

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.07  Score=46.61  Aligned_cols=79  Identities=19%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-eE--EeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..+.   .+.. .+  .|..+  .+.+...+.+...  +
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence            3678999987 8999999988888999 78888887766544333   3322 22  23222  1223333333222  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (258)
T PRK08628         83 RIDGLVNNAGV   93 (258)
T ss_pred             CCCEEEECCcc
Confidence            79999999883

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.69  E-value=0.035  Score=53.01  Aligned_cols=92  Identities=12%  Similarity=0.109  Sum_probs=60.7

Q ss_pred             hcCCCCCCEEE----EEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc
Q 019535          147 TANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       147 ~~~~~~~~~VL----I~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      +.+.++++++|    |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.. .++|.+.   ....+.+....
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence            45567788887    7764 9999999999999999 899887666544333333433 4666555   33344443321


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          221 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                                    ..+...++.+.++ |+++.++..
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~  125 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRP  125 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEccc
Confidence                          2255667777776 888877754

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.075  Score=46.53  Aligned_cols=79  Identities=20%  Similarity=0.257  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-eE--EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~-----ga~-~v--i~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ++     +.. .+  .|..+  .+++.+.+.+...
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 8999998877655442 21     211 12  23332  1223333333221


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|++.|.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence              379999998873

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.69  E-value=0.41  Score=42.68  Aligned_cols=60  Identities=23%  Similarity=0.261  Sum_probs=45.7

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCCC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKN  206 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~~  206 (339)
                      ....+++|.+|+---+|++|.+.+.+|+.+|+ +++.+..   ++++.+.++.+|+.-++....
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~~  117 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPGA  117 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCC
Confidence            44558889854443459999999999999999 5555543   578899999999987776653

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.68  E-value=0.098  Score=45.45  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=30.6

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            46899999999999999999999998888877643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.087  Score=47.76  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-e--EEeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-E--FVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~-----ga~-~--vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      .+.+++|.|+ +++|.++++.+...|+ +|+.++++.++.+.+. ++     +.. .  .+|..+  .+...+.+.+.. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence            3678999987 8999999998888999 9999999877654432 11     111 1  234333  122222332322 


Q ss_pred             -CCCccEEEEcCCC
Q 019535          221 -DGGADYCFECVGL  233 (339)
Q Consensus       221 -~g~~d~v~d~~g~  233 (339)
                       .+++|++|+++|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence             2379999998763

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.66  E-value=0.27  Score=42.37  Aligned_cols=99  Identities=20%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------HH----HHHHhcCC-ceEEeCCCCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGV-TEFVNSKNCG  208 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~----~~~~~~ga-~~vi~~~~~~  208 (339)
                      ..+|+|+|.|++|..++..+...|..+++.++.+.-                   |.    +.++++.. ..+.....  
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~--   88 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE--   88 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence            468999999999999999999999988888876431                   11    11122221 12211111  


Q ss_pred             CccHH-HHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          209 DKSVS-QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       209 ~~~~~-~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                        .+. +.+.++....+|+|+||+.+...-..+.+.+...+-.++..+
T Consensus        89 --~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~  134 (231)
T cd00755          89 --FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM  134 (231)
T ss_pred             --ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence              111 223333334699999999987754445555555312344443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.081  Score=46.08  Aligned_cols=79  Identities=24%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|..+  ...+.+.+....  .
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999988888999 899999987664433    233422 22  23222  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        83 g~id~li~~ag~   94 (253)
T PRK06172         83 GRLDYAFNNAGI   94 (253)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.091  Score=46.05  Aligned_cols=77  Identities=19%  Similarity=0.265  Sum_probs=49.5

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      .++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+    +..+.. .+  .|..+  .+.+.+.+.+...  ++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG   78 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            57999987 9999999999889999 899999887654433    223432 12  23222  1223333333221  36


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998864

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.64  E-value=0.083  Score=47.06  Aligned_cols=68  Identities=19%  Similarity=0.282  Sum_probs=50.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...+..++..|. +|++++++++..+.+.+.|.....   .   .+. +.+     ...|+||-|++..
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence            58899999999988888888898 899999999888888777642111   1   111 111     2579999999865


Q ss_pred             H
Q 019535          235 S  235 (339)
Q Consensus       235 ~  235 (339)
                      .
T Consensus        69 ~   69 (279)
T PRK07417         69 L   69 (279)
T ss_pred             H
Confidence            5

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.053  Score=46.80  Aligned_cols=81  Identities=22%  Similarity=0.250  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-c---eEEeCCCC---CCccHHHHHHHh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T---EFVNSKNC---GDKSVSQIIIDM  219 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga-~---~vi~~~~~---~~~~~~~~l~~~  219 (339)
                      .+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+.    +.+. .   ..+|..+.   ....+.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3578999987 8999999998888999 8999999887655442    2221 1   11232210   011223334443


Q ss_pred             cCCCccEEEEcCCC
Q 019535          220 TDGGADYCFECVGL  233 (339)
Q Consensus       220 ~~g~~d~v~d~~g~  233 (339)
                      ..+.+|++|+++|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33478999998873

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.091  Score=45.59  Aligned_cols=79  Identities=25%  Similarity=0.263  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.++++++..+.+.    ..+.. .  ..|..+  .+.+.+.+.+..  .
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4578999987 9999999998888999 8999998876543332    12211 1  233332  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            368999998873

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.086  Score=45.88  Aligned_cols=77  Identities=17%  Similarity=0.197  Sum_probs=49.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhcC--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .+.. ..+  |..+  ...+.+.+.+...  +
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERHG   84 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence            568999987 8999999999999999 99999988766544322    2321 222  3322  1223223333221  3


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      .+|+++++.+
T Consensus        85 ~id~li~~ag   94 (252)
T PRK07035         85 RLDILVNNAA   94 (252)
T ss_pred             CCCEEEECCC
Confidence            6899998887

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.63  E-value=0.12  Score=47.28  Aligned_cols=35  Identities=29%  Similarity=0.321  Sum_probs=31.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ..+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999998888888763

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.63  E-value=0.11  Score=43.42  Aligned_cols=76  Identities=26%  Similarity=0.300  Sum_probs=49.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCce-EEeCCCCCCccHHHHHHHhcCCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~~-vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      .+.+++|+|+ |.+|+.++..+...|+ +|+.+.++.++.+.+.+ +    +... ..+..+  .+++.+.+     .++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence            5678999986 9999999888888898 89999998877655432 2    2221 122222  01222222     258


Q ss_pred             cEEEEcCCCHH
Q 019535          225 DYCFECVGLAS  235 (339)
Q Consensus       225 d~v~d~~g~~~  235 (339)
                      |+||.+++...
T Consensus        99 diVi~at~~g~  109 (194)
T cd01078          99 DVVFAAGAAGV  109 (194)
T ss_pred             CEEEECCCCCc
Confidence            99999887655

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.61  E-value=0.11  Score=44.76  Aligned_cols=78  Identities=15%  Similarity=0.112  Sum_probs=50.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+.+++++++ .+.++..++.. ..|..+  .+.+.+.+.+...  +++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence            467999987 8999999999888999 89999887643 33344455322 233332  2333333333322  369999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998874

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.61  E-value=0.22  Score=43.92  Aligned_cols=102  Identities=19%  Similarity=0.267  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcC-------Cc--eEEeCCCCCCccHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-------VT--EFVNSKNCGDKSVSQI  215 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~g-------a~--~vi~~~~~~~~~~~~~  215 (339)
                      +..++.++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++..       ..  .++..+.   .++   
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l---  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL---  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence            345677899999998864 6677778877653 28999999999888875421       11  1221111   110   


Q ss_pred             HHHhcCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          216 IIDMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        .+.++.||.|+-..+      -...++++.+.|+++ |+++.+...
T Consensus       140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~  184 (261)
T PLN02233        140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN  184 (261)
T ss_pred             --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence              111236999975322      234588999999998 999888654

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.096  Score=45.81  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC---ceE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV---TEF--VNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga---~~v--i~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ +..   ...  .|..+  .+.+.+.+.+...  +.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence            358999987 8999999988888899 89999988777655432 211   112  23332  1233333333222  36


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++++++|.
T Consensus        79 id~lv~~ag~   88 (257)
T PRK07024         79 PDVVIANAGI   88 (257)
T ss_pred             CCEEEECCCc
Confidence            8999998763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.60  E-value=0.083  Score=46.41  Aligned_cols=78  Identities=24%  Similarity=0.284  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ +  ++|.+.++.+...|+ +|+.+.++++..+.++    +.|....  .|..+  .+...+.+.+... 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678899987 4  799999988888999 8888877642222222    2343222  34443  2333333333322 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +.+|++++++|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence             37999998776

>PRK06194 hypothetical protein; Provisional

Probab=95.60  E-value=0.09  Score=46.78  Aligned_cols=78  Identities=22%  Similarity=0.284  Sum_probs=49.3

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h---cCCc-eEE--eCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFV--NSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~---~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+... +   .+.. .++  |..+  .+.+.+.+....  .+
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERFG   82 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            578999987 8999999998888999 8999998766544432 2   2322 122  2222  122222222221  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999998875

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.60  E-value=0.13  Score=43.84  Aligned_cols=35  Identities=26%  Similarity=0.253  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35689999999999999999999999889988876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.59  E-value=0.091  Score=45.56  Aligned_cols=79  Identities=22%  Similarity=0.196  Sum_probs=49.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-ceEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga-~~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+.    ..+. ..++..+-...+.+.+.+.+...  +++
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            678999987 8999999999988999 8999988876654432    2232 12222221011222233332221  368


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++|.+.+
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.25  Score=42.57  Aligned_cols=102  Identities=19%  Similarity=0.172  Sum_probs=59.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHH----HHHhcCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~----~~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      ++.++||+|+ |.+|...++.+...|+ +++.+.++.. ..+    .+++.+.. ..+  |..+  ...+.+.+++..  
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA   80 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 7777665432 222    22233422 222  2222  122223333221  


Q ss_pred             CCCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          221 DGGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+++|++|.+.|..                         ...+.+++.+... |+++.++..
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence            13799999988741                         0123444555565 888888753

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.088  Score=46.55  Aligned_cols=77  Identities=17%  Similarity=0.177  Sum_probs=50.8

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-e--EEeCCCCCCccHHHHHHHhc--CCCccE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-E--FVNSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      .++||.|+ |.+|...++.+...|+ +|+++.+++++.+.+++ .+.. .  ..|..+  .+.+.+.+.+..  .+++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            57999987 9999999998888999 89999998877666544 2221 1  233333  122333333322  137899


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|+++|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9998874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.59  E-value=0.12  Score=47.40  Aligned_cols=34  Identities=32%  Similarity=0.362  Sum_probs=30.8

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ..+|+|+|+|++|..+++.+...|..++..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4689999999999999999999999899999875

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.59  E-value=0.28  Score=40.79  Aligned_cols=100  Identities=17%  Similarity=0.255  Sum_probs=64.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +...+.+.++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++    ++..  .++..      +...   
T Consensus        23 ~~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~---   92 (187)
T PRK08287         23 ALSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPI---   92 (187)
T ss_pred             HHHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchh---
Confidence            34455677889999998864 6667777776533389999999988777653    3322  22221      1111   


Q ss_pred             HhcCCCccEEEEcCC---CHHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       ...+.+|+|+....   -...++.+.+.|+++ |+++...
T Consensus        93 -~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         93 -ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             -hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence             11237999985432   133477889999997 9987753

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.11  Score=45.00  Aligned_cols=75  Identities=12%  Similarity=0.077  Sum_probs=48.1

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--Cc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .++||.|+ |.+|...+..+...|+ +|+.+++++++.+.+.+.+  .. ...|..+  .+++.+.+.+. ....|+++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence            46899987 9999998888888999 8999999888777665433  11 2234433  12333333332 224677766


Q ss_pred             cCC
Q 019535          230 CVG  232 (339)
Q Consensus       230 ~~g  232 (339)
                      +.|
T Consensus        78 ~ag   80 (240)
T PRK06101         78 NAG   80 (240)
T ss_pred             cCc
Confidence            554

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.58  E-value=0.3  Score=36.87  Aligned_cols=74  Identities=23%  Similarity=0.254  Sum_probs=53.7

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.++..|.. ++..+.    .-.+.+++..-..++.++-+++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence            5788999999999999999776 899999999999999888854 444333    2233344443237899998887655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.58  E-value=0.21  Score=42.55  Aligned_cols=103  Identities=20%  Similarity=0.236  Sum_probs=62.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEE------e-CCCCCCccHHHHHHHhc--
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV------N-SKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi------~-~~~~~~~~~~~~l~~~~--  220 (339)
                      .++.+||+.|+|. |.-++-+|. .|. .|++++.++...+.+ ++.+.....      . +......-....+.++.  
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5678999999874 888888875 699 999999999988875 223321000      0 00000000000011111  


Q ss_pred             -CCCccEEEEcCCC--------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          221 -DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 -~g~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       .+.||.|+|+.--        ...++.+.++|+++ |++++++..
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~  154 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD  154 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence             1368999996531        23478999999998 987777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.092  Score=47.32  Aligned_cols=79  Identities=18%  Similarity=0.200  Sum_probs=50.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc-----CCc-eE--EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~v--i~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +.+     +.. ..  +|..+  .+.+.+.+.++..
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~   91 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA   91 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence            4678999987 8999999998888899 899999887664432 111     111 12  23333  1223333333322


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|+++|.
T Consensus        92 ~~~~iD~li~nAg~  105 (306)
T PRK06197         92 AYPRIDLLINNAGV  105 (306)
T ss_pred             hCCCCCEEEECCcc
Confidence              379999998873

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.57  E-value=0.087  Score=46.31  Aligned_cols=79  Identities=22%  Similarity=0.352  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   +++|.+.++.+...|+ +|+.+.+.....+.+++    .+....  .|..+  .+++.+.+.+... 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   81 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH   81 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999983   5899999999889999 88887654332333322    342222  23333  2333333333322 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++++++|.
T Consensus        82 ~g~iD~lVnnAG~   94 (261)
T PRK08690         82 WDGLDGLVHSIGF   94 (261)
T ss_pred             hCCCcEEEECCcc
Confidence             379999998864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.57  E-value=0.12  Score=46.38  Aligned_cols=36  Identities=22%  Similarity=0.345  Sum_probs=31.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++++|+|+|++|++++..+...|+++|+++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999999888899996799999885

>PRK09242 tropinone reductase; Provisional

Probab=95.56  E-value=0.1  Score=45.54  Aligned_cols=79  Identities=20%  Similarity=0.152  Sum_probs=51.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-eE--EeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--ga~-~v--i~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .  +.. ..  .|..+  .+.+.+.+.+.. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            3678999987 8999999999999999 89999988776554422    1  221 11  23322  122222222221 


Q ss_pred             -CCCccEEEEcCCC
Q 019535          221 -DGGADYCFECVGL  233 (339)
Q Consensus       221 -~g~~d~v~d~~g~  233 (339)
                       -+++|+++.+.|.
T Consensus        85 ~~g~id~li~~ag~   98 (257)
T PRK09242         85 HWDGLHILVNNAGG   98 (257)
T ss_pred             HcCCCCEEEECCCC
Confidence             1379999999974

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.55  E-value=0.15  Score=43.83  Aligned_cols=84  Identities=19%  Similarity=0.222  Sum_probs=59.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh--cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~--~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +++|+|+|.+|...++.+...|. .|++++.++++.+...+  ++. +++..+.    .-.+.++++--..+|+++-+++
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence            57899999999999999999999 89999999988777333  544 4443333    2234455543338999999998


Q ss_pred             CHHHHHHHHHHhh
Q 019535          233 LASLVQEAYACCR  245 (339)
Q Consensus       233 ~~~~~~~~~~~l~  245 (339)
                      +.. .+..+..++
T Consensus        76 ~d~-~N~i~~~la   87 (225)
T COG0569          76 NDE-VNSVLALLA   87 (225)
T ss_pred             CCH-HHHHHHHHH
Confidence            865 444444444

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.1  Score=44.88  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.+++|.|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+    ++.+.. ..  .|..+  .+.+.+.+.+...  
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF   80 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            3678999987 7999999988888999 899999888776543    233432 12  23333  2333333332221  


Q ss_pred             C-CccEEEEcCC
Q 019535          222 G-GADYCFECVG  232 (339)
Q Consensus       222 g-~~d~v~d~~g  232 (339)
                      + .+|++|++.|
T Consensus        81 g~~iD~li~nag   92 (227)
T PRK08862         81 NRAPDVLVNNWT   92 (227)
T ss_pred             CCCCCEEEECCc
Confidence            3 7999999886

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.12  Score=45.04  Aligned_cols=73  Identities=19%  Similarity=0.206  Sum_probs=46.5

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ++++||.|+ |.+|...++.+...|+ +|+++++++ +..+....... ....|..+   .   +.+.+.. +++|++|+
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~-~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDESPNEWIKWECGK---E---ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhccCCCeEEEeeCCC---H---HHHHHhc-CCCCEEEE
Confidence            578999987 8999999999989999 899988775 22222111111 11233332   1   2233332 36999999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9874

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.54  E-value=0.14  Score=44.76  Aligned_cols=35  Identities=26%  Similarity=0.382  Sum_probs=30.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|..++..+...|..++..++.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            35789999999999999999999999888888654

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.091  Score=46.56  Aligned_cols=77  Identities=16%  Similarity=0.165  Sum_probs=50.1

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+..    .+.   ..+  .|..+  .+.+.+ +.+... 
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence            467899987 8999999998888899 89999988766544422    221   122  23333  223333 433322 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|+++.+.|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence             378999998864

>PRK04266 fibrillarin; Provisional

Probab=95.53  E-value=0.17  Score=43.47  Aligned_cols=102  Identities=13%  Similarity=0.147  Sum_probs=62.7

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +...++++++||-+|+|+ |..+..+++..+..+|++++.+++..+.+.+.    .....+..+.   .+. .....+ .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence            357889999999998763 55666677766533899999999877654322    1112222121   110 000111 1


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhhcCCcEEEEe
Q 019535          222 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       222 g~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.+|+++.-...+    ..++.+.+.|+++ |+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2599999544432    2367888899998 999884

>PRK08589 short chain dehydrogenase; Validated

Probab=95.53  E-value=0.089  Score=46.51  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=49.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc---eEEeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT---EFVNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~---~vi~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .+.++||.|+ +.+|.+.++.+...|+ +|+.++++++..+.+++   .+..   ...|..+  .+.+.+.+.+..  .+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence            4678999987 8999999998888999 89999987332222322   2321   2234333  122333333322  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (272)
T PRK08589         82 RVDVLFNNAGV   92 (272)
T ss_pred             CcCEEEECCCC
Confidence            68999998763

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.11  Score=44.97  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=49.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-eE--EeCCCCCCccHHHHHHHhc--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--ga~-~v--i~~~~~~~~~~~~~l~~~~--  220 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+..    .  +.. .+  .|..+  .+.+.+.+.+..  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            467999987 9999999888888898 89999988876654432    1  211 22  23333  223333333322  


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      .+++|++|.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            237999999886

>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins

Probab=95.52  E-value=0.16  Score=42.11  Aligned_cols=70  Identities=23%  Similarity=0.296  Sum_probs=56.2

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ++++.+||-+|+|. |.+...|....++ ..++++.++++...+.+.|.. |+.      .++.+.+....++.||+||
T Consensus        11 I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI   80 (193)
T PF07021_consen   11 IEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI   80 (193)
T ss_pred             cCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence            68899999999974 7777777777888 999999999998888888865 443      4566666666666999998

Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.52  E-value=0.16  Score=45.56  Aligned_cols=71  Identities=21%  Similarity=0.190  Sum_probs=51.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|....        .+..+.+.     ..|+||.|++..
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~   66 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS   66 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence            37889999999988888888899 89999999998888877765211        12222222     368888888875


Q ss_pred             HHHHH
Q 019535          235 SLVQE  239 (339)
Q Consensus       235 ~~~~~  239 (339)
                      ...+.
T Consensus        67 ~~~~~   71 (291)
T TIGR01505        67 PQVEE   71 (291)
T ss_pred             HHHHH
Confidence            43443

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.51  E-value=0.16  Score=45.06  Aligned_cols=95  Identities=20%  Similarity=0.268  Sum_probs=64.6

Q ss_pred             ccccchhhhhhHHHHHhcCC-CCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC
Q 019535          131 CLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG  208 (339)
Q Consensus       131 a~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~  208 (339)
                      ..+||.....+. +++..++ -.|.+++|+|.| .+|.-++.++...|+ .|+.+.+..                     
T Consensus       136 ~~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------  192 (286)
T PRK14175        136 TFVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------  192 (286)
T ss_pred             CCCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------
Confidence            345654333333 4444443 368999999986 499999999999999 888776421                     


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       .++.+.++     .+|+||.++|.+..+..  +.++++ -.++++|..
T Consensus       193 -~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~  232 (286)
T PRK14175        193 -KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT  232 (286)
T ss_pred             -hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence             12333332     37999999999864544  457886 788888874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.50  E-value=0.082  Score=46.26  Aligned_cols=78  Identities=26%  Similarity=0.280  Sum_probs=49.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc---eEEeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT---EFVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~---~vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++...+..++   .+..   ...|..+  .+...+.+.+...  +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            3678999987 8999999999988999 89999887543333322   3322   1234333  1223333333222  3


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      ++|++++++|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999886

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.50  E-value=0.1  Score=43.20  Aligned_cols=94  Identities=14%  Similarity=0.145  Sum_probs=58.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.+||-+|+|. |..++.+++.....+|++++.+++..+.++    +.+...+ ....   .+..+ +  ...+.+|+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~---~d~~~-~--~~~~~fD~I  113 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN---GRAED-F--QHEEQFDVI  113 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe---cchhh-c--cccCCccEE
Confidence            378999998763 666666666554338999999988776654    3453321 1111   22222 1  112389999


Q ss_pred             EEcC-CC-HHHHHHHHHHhhcCCcEEEEe
Q 019535          228 FECV-GL-ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       228 ~d~~-g~-~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +-.. .. +..++.+.+.|+++ |+++..
T Consensus       114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       114 TSRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            8432 22 34467788999997 998876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.50  E-value=0.18  Score=46.11  Aligned_cols=87  Identities=23%  Similarity=0.284  Sum_probs=54.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+++|.|+|.|.+|...++.++..|+ +|++.+++++.. .....+...         .++.+.+.     ..|+|+-+.
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~-----~aDiV~l~l  212 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR-----ESDFVSLHV  212 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh-----hCCEEEEeC
Confidence            57899999999999999999999999 899998875433 223333211         12222222     257777666


Q ss_pred             CCHHH-----HHHHHHHhhcCCcEEEEec
Q 019535          232 GLASL-----VQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~~-----~~~~~~~l~~~~G~~v~~g  255 (339)
                      +....     -...+..++++ ..+|.++
T Consensus       213 P~t~~T~~~i~~~~~~~mk~g-a~lIN~a  240 (333)
T PRK13243        213 PLTKETYHMINEERLKLMKPT-AILVNTA  240 (333)
T ss_pred             CCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence            53221     12445666665 5555554

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.48  E-value=0.079  Score=53.24  Aligned_cols=76  Identities=28%  Similarity=0.294  Sum_probs=51.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCceEEeCCCCCCc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK  210 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~~ga~~vi~~~~~~~~  210 (339)
                      .+.+|+|+|+|+.|+.++..++..|+ +|++++..+.                     ..+.++++|.+...+..-....
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            57899999999999999999999999 8988876532                     3455666776544332210001


Q ss_pred             cHHHHHHHhcCCCccEEEEcCCC
Q 019535          211 SVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       211 ~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+ +.+.    ..+|.||.++|.
T Consensus       405 ~~-~~~~----~~~DavilAtGa  422 (654)
T PRK12769        405 SL-ESLL----EDYDAVFVGVGT  422 (654)
T ss_pred             CH-HHHH----hcCCEEEEeCCC
Confidence            11 1111    268999998885

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.47  E-value=0.093  Score=46.33  Aligned_cols=106  Identities=16%  Similarity=0.229  Sum_probs=68.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +....++.++.+||-+|+|. |..+..+++..++ +|++++.+++..+.+++... ..-+....   .++.+  .....+
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~---~D~~~--~~~~~~  116 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA---NDILK--KDFPEN  116 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE---CCccc--CCCCCC
Confidence            45667888999999999863 5666777777788 99999999988888766321 11111111   11110  011123


Q ss_pred             CccEEEE--cC---C---CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFE--CV---G---LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d--~~---g---~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .||+|+.  +.   +   -...++.+.+.|+|+ |+++.....
T Consensus       117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            7999985  21   1   134578889999998 999887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.46  E-value=0.11  Score=46.09  Aligned_cols=78  Identities=27%  Similarity=0.277  Sum_probs=49.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.+++|.|+ |.+|++.++.+...|+ +|+.+++++++.+.+    +..+.. ..  .|..+  ...+.+.+.+...  
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   85 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF   85 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3678999987 8999999999989999 899999877654433    222322 12  22222  1223333332221  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        86 g~id~li~~ag   96 (278)
T PRK08277         86 GPCDILINGAG   96 (278)
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.46  E-value=0.15  Score=44.41  Aligned_cols=79  Identities=23%  Similarity=0.334  Sum_probs=49.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCc-e--EEeCCCCCCccHHHHHHHhc--CCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-E--FVNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      .++++||.|+ +++|.++++.+...|+ +|+.+.++...  .+.++..+.. .  ..|..+  .+++.+.+.+..  -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence            4678999987 8999999999999999 88888765321  2233444432 1  234333  223333333322  237


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.45  E-value=0.1  Score=46.29  Aligned_cols=93  Identities=16%  Similarity=0.116  Sum_probs=59.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      ..+.+++|+|+|++|.+.+..+...|+ +|+++.+++++.+.+ +.+   +........        +    .....+|+
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~~~~Di  181 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPLHRVDL  181 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcccCccE
Confidence            457789999999999999988888898 899999987775544 333   221222111        1    11125899


Q ss_pred             EEEcCCCHHH--H---HHHHHHhhcCCcEEEEeccC
Q 019535          227 CFECVGLASL--V---QEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       227 v~d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ||+|++....  .   ......++++ ..++++...
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~  216 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN  216 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence            9999986310  1   1123456775 677777554

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.43  E-value=0.098  Score=45.71  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=48.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h----cCC--ceEE--eCCCCCCccHHHHHHHhc--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~----~ga--~~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      ++++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. +    .+.  ...+  |..+  .+.+...+.+..  
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~   78 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI   78 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence            468999987 8999999999888999 8999998876544332 1    221  1222  3222  122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|+++++.|.
T Consensus        79 ~~~id~vv~~ag~   91 (259)
T PRK12384         79 FGRVDLLVYNAGI   91 (259)
T ss_pred             cCCCCEEEECCCc
Confidence            1478999998873

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=95.42  E-value=0.34  Score=40.90  Aligned_cols=98  Identities=17%  Similarity=0.215  Sum_probs=64.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-CCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-~g~~d~  226 (339)
                      ++.+||-+|+|. |..+..+++.....++++++.+++..+.+++    .+...+ ....   .+..+.+.... .+.+|.
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~l~~~~~~~~~D~  114 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLC---GDAVEVLLDMFPDGSLDR  114 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEe---cCHHHHHHHHcCccccce
Confidence            577899999874 7778888877643489999999998887754    232222 1111   23323333323 337999


Q ss_pred             EEEcCC--------------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          227 CFECVG--------------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+-...              ....++.+.+.|+++ |.++...
T Consensus       115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            975332              234588999999997 9988763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.42  E-value=0.12  Score=45.94  Aligned_cols=102  Identities=17%  Similarity=0.225  Sum_probs=64.2

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHH-HhcCCce--EEeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTE--FVNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~-~~~ga~~--vi~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   +++|+++++.+...|+ +|+.+.++.+   +.+.+ ++++...  ..|..+  .+.+.+.+.+... 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence            3678999986   4899999999888999 8988887743   22222 3344322  234443  2233333333322 


Q ss_pred             -CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          222 -GGADYCFECVGLA--------------S---------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 -g~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +.+|++++++|..              .               ..+..+..+..+ |+++.++..
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~  145 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL  145 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence             4799999988731              0               234556667776 899888754

>PRK08264 short chain dehydrogenase; Validated

Probab=95.41  E-value=0.092  Score=45.22  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=48.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.++||+|+ |.+|..+++.+...|+++|+.++++.++.+.   .+.. .+  .|..+   .+-.+.+.+.. +.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA-SDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            4578999986 9999999999989998678888887665443   3221 22  23322   22222222221 268999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            998876

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.049  Score=48.00  Aligned_cols=76  Identities=22%  Similarity=0.288  Sum_probs=50.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~v~  228 (339)
                      +.+++|.|+ |.+|...++.+...|+ +|+++++++++.+...  +.. ...|..+  .+.+.+.+....  .+.+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence            467999987 9999999998888999 8999998765543221  222 2234433  233333333322  23789999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      ++.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99884

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.12  Score=45.79  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=50.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-ceE--EeCCCCCCccHHHHHHHhc--CCCcc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEF--VNSKNCGDKSVSQIIIDMT--DGGAD  225 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga-~~v--i~~~~~~~~~~~~~l~~~~--~g~~d  225 (339)
                      +.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+.. ++. ..+  .|..+  .+.+.+.+....  -+++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            457999987 9999999988888899 89999998877665543 221 122  23222  122323233221  13789


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (275)
T PRK08263         80 IVVNNAGY   87 (275)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.11  Score=45.45  Aligned_cols=77  Identities=23%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-eE--EeCCCCCCccHHHHHHHhcCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~-~v--i~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+.+     .+.. ..  .|..+  .+.+.+.+.. . +
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~-~-g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAE-A-G   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHH-h-C
Confidence            3678999987 8999999998888999 99999988776554322     1321 22  23222  1222222222 1 4


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|++|++.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.39  E-value=0.11  Score=45.34  Aligned_cols=78  Identities=17%  Similarity=0.234  Sum_probs=48.9

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--ceE--EeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEF--VNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--~~v--i~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .++++||.|+   +++|.+.++.+...|+ +|+.+.++++..+.++++..  ...  .|..+  .++..+.+.+...  +
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence            4678999986   3899999998888999 89988877443444444321  112  23332  2233333333222  4


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      .+|++++++|
T Consensus        83 ~iD~lv~nAg   92 (252)
T PRK06079         83 KIDGIVHAIA   92 (252)
T ss_pred             CCCEEEEccc
Confidence            7999999876

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.38  E-value=0.14  Score=44.54  Aligned_cols=79  Identities=27%  Similarity=0.415  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    +..+.. ..  .|..+  .+.+.+.+.+..  .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 8999999999888999 899999887665433    222322 12  23332  122333232222  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++.+.|.
T Consensus        85 ~~id~vi~~ag~   96 (254)
T PRK08085         85 GPIDVLINNAGI   96 (254)
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>PLN02253 xanthoxin dehydrogenase

Probab=95.37  E-value=0.1  Score=46.24  Aligned_cols=79  Identities=20%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC---ce--EEeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TE--FVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga---~~--vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|++++++++..+.+ +.++.   ..  ..|..+  .+.+.+.+.....  +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            3678999987 8999999988888999 899998876654433 22321   11  233333  1223232332221  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            79999998864

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.36  E-value=0.13  Score=44.82  Aligned_cols=78  Identities=26%  Similarity=0.379  Sum_probs=51.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCcc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGAD  225 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~d  225 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..  .|..+  .+.+.+.+.+..  .+.+|
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            578999987 9999999999999999 89999988877655433 3321 12  23222  122333333221  13789


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      +++.+.+.
T Consensus        83 ~li~~ag~   90 (257)
T PRK07067         83 ILFNNAAL   90 (257)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.36  E-value=0.12  Score=47.05  Aligned_cols=78  Identities=21%  Similarity=0.198  Sum_probs=50.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---Cc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g---a~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +++.   .. .+  .|..+  ...+.+.+.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999987 8999999998888998 899999887765543 2231   11 11  23333  122222232221  2


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            36999999887

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.19  Score=44.59  Aligned_cols=79  Identities=24%  Similarity=0.286  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+    +..+.. ..  .|..+  .+++.+.+.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 899888877655443    223432 11  23322  122322222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        82 g~id~li~nAg~   93 (275)
T PRK05876         82 GHVDVVFSNAGI   93 (275)
T ss_pred             CCCCEEEECCCc
Confidence            368999998873

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.35  E-value=0.21  Score=45.63  Aligned_cols=89  Identities=17%  Similarity=0.102  Sum_probs=63.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-----------EEeCCCCCCccHHHHHHHhcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-----------FVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-----------vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +|.|+|+|.+|.+.+..+...|. +|.++.+++++.+.+++.+...           +...     .+..+.+     ..
T Consensus         6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~-----~~~~e~~-----~~   74 (328)
T PRK14618          6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPT-----ADPEEAL-----AG   74 (328)
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe-----CCHHHHH-----cC
Confidence            69999999999999999888898 8999999888777766532110           1111     1222222     25


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .|+||-|+.... ++..++.++++ -.++.+..
T Consensus        75 aD~Vi~~v~~~~-~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         75 ADFAVVAVPSKA-LRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             CCEEEEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence            899999999987 77888888885 55665543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.34  E-value=0.13  Score=44.42  Aligned_cols=79  Identities=19%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++...+    +..+.. .++  |..+  .+.+.+.+.+...  
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            3578999987 9999999988888899 899999886544332    223321 122  2222  1223333322221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +.+|++|.+.+.
T Consensus        82 ~~~d~vi~~ag~   93 (251)
T PRK12826         82 GRLDILVANAGI   93 (251)
T ss_pred             CCCCEEEECCCC
Confidence            368999998754

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.077  Score=45.51  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=48.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC-CccEEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d  229 (339)
                      +.++||.|+ |.+|...++.+...|. +|+.+.+++++     .... ....|..+  .+.+.+.+.+.... ++|++|.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence            568999987 8999999999999999 89999887654     1111 12234333  23333334444333 7899999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.30  E-value=0.22  Score=42.94  Aligned_cols=34  Identities=26%  Similarity=0.324  Sum_probs=30.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ..+|+|+|+|++|...+..+...|..+++.++.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5789999999999999999999999888888543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.30  E-value=0.13  Score=45.24  Aligned_cols=78  Identities=15%  Similarity=0.214  Sum_probs=47.7

Q ss_pred             CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|++   ++|.++++.+...|+ +|+.+.+++...+.+++    .+....  .|..+  .+++.+.+.+... 
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   81 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV   81 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence            46789999873   799999988888999 88888776322222322    232222  33333  2333333333322 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +.+|++|+++|
T Consensus        82 ~g~iD~linnAg   93 (262)
T PRK07984         82 WPKFDGFVHSIG   93 (262)
T ss_pred             cCCCCEEEECCc
Confidence             37999999887

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.29  E-value=0.073  Score=47.00  Aligned_cols=78  Identities=17%  Similarity=0.223  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH----HHHHhcCC--ceEEeCCCCCCccHHH---HHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF----EIGKRFGV--TEFVNSKNCGDKSVSQ---IIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~----~~~~~~ga--~~vi~~~~~~~~~~~~---~l~~~~~  221 (339)
                      .|+.|||.|+ +++|++.++=...+|+ +++.++.+++..    +.+++.|.  ..+.|-.+  .+++..   ++++.. 
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~-  112 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV-  112 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc-
Confidence            5899999987 6999998887778888 888888876543    33344452  24455444  244433   333332 


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      |.+|++++.+|-
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence            279999998875

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.1  Score=45.47  Aligned_cols=75  Identities=17%  Similarity=0.250  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--Cc-eEEeCCCCCCccHHHHHHHhc--CCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VT-EFVNSKNCGDKSVSQIIIDMT--DGGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~~~~~l~~~~--~g~~d  225 (339)
                      .++++||.|+ |.+|...++.+...|+ +|+.+++++++    +..+  .. ...|..+  .+.+.+.+....  -+.+|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   77 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            4688999987 8999999999988999 89999987654    1122  11 1223333  122333332221  13789


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|.+.|.
T Consensus        78 ~vi~~ag~   85 (252)
T PRK07856         78 VLVNNAGG   85 (252)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.28  E-value=0.12  Score=45.70  Aligned_cols=78  Identities=19%  Similarity=0.336  Sum_probs=48.2

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHH-HhcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRFGVTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~~ga~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   +++|.+.++.+...|+ +|+.+.+++   ++.+.+ ++++....  .|..+  .+...+.+.+... 
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   85 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKK   85 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHh
Confidence            4678999986   5899999999989999 888887653   222322 33453222  33332  2233333333322 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +.+|++++++|
T Consensus        86 ~g~iD~lv~nAG   97 (272)
T PRK08159         86 WGKLDFVVHAIG   97 (272)
T ss_pred             cCCCcEEEECCc
Confidence             37999999876

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.13  Score=45.00  Aligned_cols=79  Identities=24%  Similarity=0.311  Sum_probs=49.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.++++.+..+.+++   .+.. ..  .|..+  ..++.+.+.+..  .+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            4678999987 8999999999988999 89999887654333322   2322 12  22222  122222222221  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (263)
T PRK08226         82 RIDILVNNAGV   92 (263)
T ss_pred             CCCEEEECCCc
Confidence            78999998873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.27  E-value=0.13  Score=44.68  Aligned_cols=78  Identities=21%  Similarity=0.298  Sum_probs=50.3

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.    ..+.. .  ..|..+  ...+.+.+.+..  .+
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETFG   80 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence            578999987 9999999998888899 8999999877654432    22322 1  223332  122223232221  13


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|.+++.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998863

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.27  E-value=0.24  Score=44.50  Aligned_cols=71  Identities=17%  Similarity=0.178  Sum_probs=50.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|... .       .++.+.+.     ..|+||.|+..+
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~~~~e~~~-----~~d~vi~~vp~~   69 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A-------STAKAVAE-----QCDVIITMLPNS   69 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c-------CCHHHHHh-----cCCEEEEeCCCH
Confidence            68999999999988887778898 8999999988888777766421 1       12222221     378999888765


Q ss_pred             HHHHH
Q 019535          235 SLVQE  239 (339)
Q Consensus       235 ~~~~~  239 (339)
                      ...+.
T Consensus        70 ~~~~~   74 (296)
T PRK11559         70 PHVKE   74 (296)
T ss_pred             HHHHH
Confidence            53443

>PRK07985 oxidoreductase; Provisional

Probab=95.26  E-value=0.31  Score=43.71  Aligned_cols=102  Identities=21%  Similarity=0.130  Sum_probs=60.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHHH----HhcCCc---eEEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVT---EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~----~~~ga~---~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+.++.  +..+.+    +..+..   ...|..+  .+.+.+.+.+...
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~  124 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK  124 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999989999 888876542  222222    223422   1223333  1223333333222


Q ss_pred             --CCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          222 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 --g~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        +++|+++.+.|..                          ...+.++..+..+ |++|.++..
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~  187 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence              3789999887631                          1233445555666 899888753

>PRK06849 hypothetical protein; Provisional

Probab=95.26  E-value=1  Score=42.18  Aligned_cols=93  Identities=16%  Similarity=0.111  Sum_probs=58.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhcCC-CccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDG-GADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g-~~d~v  227 (339)
                      ...+|||+|+ .+.|+..++.++..|. +|++++..+.......+ .++  ..+.......+.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            3578999998 5789999999999999 99999887644332211 122  22321221124567778777766 89999


Q ss_pred             EEcCCCHHHHHHHHHHhhc
Q 019535          228 FECVGLASLVQEAYACCRK  246 (339)
Q Consensus       228 ~d~~g~~~~~~~~~~~l~~  246 (339)
                      |-+...........+.+..
T Consensus        81 IP~~e~~~~~a~~~~~l~~   99 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSA   99 (389)
T ss_pred             EECChHHHhHHhhhhhhcC
Confidence            9776543223333444544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.25  E-value=0.18  Score=41.32  Aligned_cols=94  Identities=14%  Similarity=0.244  Sum_probs=60.8

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|.|+|+ |-+|...++=|...|. .|+++++++.+....+..   .++..+-   -+.......+  .++|+||++.+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence            5889987 9999999999999999 999999999887553221   1221111   1111111111  279999998876


Q ss_pred             H--H-------HHHHHHHHhhcC-CcEEEEeccC
Q 019535          234 A--S-------LVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       234 ~--~-------~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      .  .       ..+.++..++.. --|+..+|..
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            4  1       134466667662 2488888764

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.42  Score=42.75  Aligned_cols=79  Identities=20%  Similarity=0.131  Sum_probs=47.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCce-E--EeCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-F--VNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+.++.++ .+.    ++..+... +  .|..+  .+.+.+.+.+..  
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i~~~  121 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEETVRE  121 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999988888999 88888776432 222    22234321 2  23222  122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|++|.++|.
T Consensus       122 ~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 LGRLDILVNNAAF  134 (290)
T ss_pred             cCCCCEEEECCcc
Confidence            1368999988764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.24  E-value=0.3  Score=45.56  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=31.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .+.+|+|+|+|++|..++..+...|..++..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46789999999999999999999999889998876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.22  E-value=0.15  Score=46.21  Aligned_cols=88  Identities=17%  Similarity=0.189  Sum_probs=55.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|+..++.++.+|+ +|++.++++++..     +.....  ..   .++.+.+.     ..|+|+.+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~--~~---~~l~e~l~-----~aDvvv~~l  198 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA--GR---EELSAFLS-----QTRVLINLL  198 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec--cc---ccHHHHHh-----cCCEEEECC
Confidence            57899999999999999999999999 9999987543321     111111  01   22322222     367777776


Q ss_pred             CCHHHH-----HHHHHHhhcCCcEEEEecc
Q 019535          232 GLASLV-----QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~~~-----~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.....     ...++.|+++ ..+|.+|.
T Consensus       199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR  227 (312)
T PRK15469        199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR  227 (312)
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence            643222     2456667775 66666653

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=95.21  E-value=0.15  Score=42.92  Aligned_cols=98  Identities=17%  Similarity=0.099  Sum_probs=71.4

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-C
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G  223 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~  223 (339)
                      +....+....+|.-+|+|+ |..+..|++...-..|.++++|++.++.+++...+--+..     .    .++++... .
T Consensus        23 la~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~-----a----Dl~~w~p~~~   92 (257)
T COG4106          23 LARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEE-----A----DLRTWKPEQP   92 (257)
T ss_pred             HhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceec-----c----cHhhcCCCCc
Confidence            3344566778888889986 8899999999976699999999999999877654322211     1    24566666 7


Q ss_pred             ccEEEEcCC------CHHHHHHHHHHhhcCCcEEEE
Q 019535          224 ADYCFECVG------LASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       224 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .|++|...-      -+..+..++..|+++ |.+..
T Consensus        93 ~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LAV  127 (257)
T COG4106          93 TDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLAV  127 (257)
T ss_pred             cchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEEE
Confidence            888884332      356689999999997 86644

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.20  E-value=0.33  Score=37.63  Aligned_cols=87  Identities=16%  Similarity=0.210  Sum_probs=53.3

Q ss_pred             EEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhH---HHHHHhcCCceEEeCCCCCCccHHHHH-------------
Q 019535          156 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKSVSQII-------------  216 (339)
Q Consensus       156 VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~---~~~~~~~ga~~vi~~~~~~~~~~~~~l-------------  216 (339)
                      |.|+|+ |.+|..++.+.+...  + +|++..-...-   .+.++++....+.-.++    ...+.+             
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v   75 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV   75 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence            578897 999999999999997  6 67766543322   34446677766655443    222222             


Q ss_pred             -------HHhcCC-CccEEEEcCCCHHHHHHHHHHhhcC
Q 019535          217 -------IDMTDG-GADYCFECVGLASLVQEAYACCRKG  247 (339)
Q Consensus       217 -------~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~  247 (339)
                             .++... .+|+++.++.+...+.-.+..+..+
T Consensus        76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence                   233332 6788887776666677777777764

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.15  Score=44.57  Aligned_cols=78  Identities=19%  Similarity=0.302  Sum_probs=49.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC---Cc-eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VT-EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g---a~-~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      +.++||.|+ |.+|...+..+...|+ +|+.+++++++.+.+. .+.   +. ...|..+  .+.+...+.+...  +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            467999987 8999999988888899 8999998877655443 222   11 1233333  1222223332221  368


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.18  E-value=0.18  Score=43.45  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=49.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      +.+++|.|+ |.+|..++..+...|+ +|+.+++++++.+.+    +..+.. .++..+-.....+.+.+++...  +++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            578999987 8999999988888999 899999887654433    223322 1222221011233333333221  378


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999998864

>PRK08328 hypothetical protein; Provisional

Probab=95.18  E-value=0.16  Score=43.87  Aligned_cols=34  Identities=29%  Similarity=0.424  Sum_probs=30.3

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +.+|+|+|+|++|..++..+...|..++..++.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5689999999999999999999999888888754

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.16  E-value=0.11  Score=40.31  Aligned_cols=79  Identities=20%  Similarity=0.274  Sum_probs=49.1

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .-+|-|+|+|.+|......++..|. .|..+. +++++.+.+.. ++...+.+..+            .. ..+|++|-+
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~ia   75 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIA   75 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEE
Confidence            3578999999999999999999999 787774 45555555544 44444443322            11 258999999


Q ss_pred             CCCHHHHHHHHHHhhc
Q 019535          231 VGLASLVQEAYACCRK  246 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~  246 (339)
                      ++... +...++.|..
T Consensus        76 vpDda-I~~va~~La~   90 (127)
T PF10727_consen   76 VPDDA-IAEVAEQLAQ   90 (127)
T ss_dssp             S-CCH-HHHHHHHHHC
T ss_pred             echHH-HHHHHHHHHH
Confidence            99887 6666666664

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.53  Score=40.75  Aligned_cols=102  Identities=22%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHH----HHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKF----EIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~----~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      +.++||.|+ |.+|...++.+...|+ +++.+.++ .+..    ..++..+.. ..  .|..+  ...+...+.++..  
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY   82 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence            578999987 8999999988888999 77666543 2222    122333322 12  23332  1222222222211  


Q ss_pred             CCccEEEEcCCC----------H---------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          222 GGADYCFECVGL----------A---------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       222 g~~d~v~d~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +++|++|.+.|.          .               ...+.+.+.+... |+++.++...
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            378999998873          1               0133445566675 8999887643

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.15  E-value=0.15  Score=44.32  Aligned_cols=76  Identities=16%  Similarity=0.279  Sum_probs=50.3

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-e--EEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      +++|.|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++.. .  ..|..+  .+.+.+.+.+...  +++|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            5899987 9999999999989999 89999998877666543 3422 1  123333  1223333333222  379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      +.++|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            998764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.14  E-value=0.25  Score=39.59  Aligned_cols=97  Identities=20%  Similarity=0.268  Sum_probs=63.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCC---CCccHHHHHHHhcCC-CccEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDG-GADYC  227 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~---~~~~~~~~l~~~~~g-~~d~v  227 (339)
                      ..+|+|.|+ |.+|.++++.-|+.++ -|..++.++...     -.+..+++.++.   ..+...+++.+...+ ++|.|
T Consensus         3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            357999987 9999999999999999 888887664432     222334443320   012233455555666 99999


Q ss_pred             EEcCCC--------------------------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          228 FECVGL--------------------------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |...|+                          ......+-..|.++ |-+-+.|.
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA  130 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA  130 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence            987765                          01133445678887 88877764

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.17  Score=44.15  Aligned_cols=79  Identities=15%  Similarity=0.223  Sum_probs=48.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HH----HHHhcCCc-eE--EeCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EF--VNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~----~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ +.+|.++++.+...|+ +|+.++++.++ .+    .++..+.. ..  .|..+  .+.+.+.+.+..  
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3678999987 8999999999999999 89888876432 12    22333422 12  23322  122333333322  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+.+|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (254)
T PRK06114         84 LGALTLAVNAAGI   96 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            2478999998874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.12  E-value=0.17  Score=44.14  Aligned_cols=100  Identities=15%  Similarity=0.139  Sum_probs=60.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc--CCceE-EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~--ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.......  ++..+ .|..+   .  .+.+.+....++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCEE
Confidence            4578999997 9999999988888899 899988887765433221  22222 23222   1  122323222268999


Q ss_pred             EEcCCCHH-------------HHHHHHHHhhcC-CcEEEEeccC
Q 019535          228 FECVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       228 ~d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      |.+.|...             ....+++.+... .+++|.++..
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            98876421             123444544432 2578887753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.12  E-value=0.16  Score=44.24  Aligned_cols=79  Identities=19%  Similarity=0.337  Sum_probs=48.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+.+++++.  ..+.+++.+.. ..  .|..+  .+++.+.+.+...  ++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence            3678999987 8999999999999999 8888765432  22333344422 22  22222  1223333333221  37


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|+++|.
T Consensus        86 ~D~li~~Ag~   95 (253)
T PRK08993         86 IDILVNNAGL   95 (253)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.11  E-value=0.27  Score=42.95  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=30.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      -.+.+|+|+|-|.+|+.+++++...|+ +|++++.
T Consensus        36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD   69 (254)
T cd05313          36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD   69 (254)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence            357899999999999999999999999 8987764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK06484 short chain dehydrogenase; Validated

Probab=95.07  E-value=0.12  Score=50.41  Aligned_cols=79  Identities=16%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++..   ..+|..+  .+.+.+.+.+...  +++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999987 8999999999999999 999999887776554 445532   2234333  2333333333322  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|++.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999998764

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.07  E-value=0.17  Score=39.71  Aligned_cols=96  Identities=22%  Similarity=0.264  Sum_probs=55.9

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------HHHHH----HhcC-CceEEeCCCCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KFEIG----KRFG-VTEFVNSKNCG  208 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~~~----~~~g-a~~vi~~~~~~  208 (339)
                      ..+|+|+|+|++|...+..+...|..++..++.+.-                   |.+.+    +++. ...+.....  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            468999999999999999999999988888875421                   11111    2221 122222211  


Q ss_pred             CccH-HHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          209 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       209 ~~~~-~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                        .+ .+.+.++. .++|+||+|..+...-..+.+.+... +.-+..
T Consensus        80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~  122 (135)
T PF00899_consen   80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFID  122 (135)
T ss_dssp             --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEE
T ss_pred             --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEE
Confidence              11 12222222 25899999998877555555556554 544333

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.06  E-value=0.3  Score=41.17  Aligned_cols=35  Identities=37%  Similarity=0.441  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35689999999999999999999999789888877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.06  E-value=0.25  Score=39.88  Aligned_cols=80  Identities=15%  Similarity=0.099  Sum_probs=54.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-----------ceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-----------TEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-----------~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +|.|+|+|..|.+++.++...|. +|....++++..+.+++-+.           ..+.-+     .++.+.+     .+
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t-----~dl~~a~-----~~   69 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT-----TDLEEAL-----ED   69 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE-----SSHHHHH-----TT
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc-----cCHHHHh-----Cc
Confidence            58899999999999999999998 99999999887777754221           112111     2333333     25


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhhc
Q 019535          224 ADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       224 ~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                      .|+++-++++.. .+..++.+.+
T Consensus        70 ad~IiiavPs~~-~~~~~~~l~~   91 (157)
T PF01210_consen   70 ADIIIIAVPSQA-HREVLEQLAP   91 (157)
T ss_dssp             -SEEEE-S-GGG-HHHHHHHHTT
T ss_pred             ccEEEecccHHH-HHHHHHHHhh
Confidence            799999999876 6666666655

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.06  E-value=0.19  Score=43.81  Aligned_cols=79  Identities=18%  Similarity=0.298  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|..+  ...+...+.+...  
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4788999987 8999999988888999 899999987654443    233421 12  23333  1223333333221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.+.|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.06  E-value=0.32  Score=43.22  Aligned_cols=88  Identities=19%  Similarity=0.195  Sum_probs=63.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|..+|.|.+|.-.++-+...|+ .+.+.++++++ .+.++..|+...-        ...+.+.     ..|+||-|+++
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~   67 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD   67 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence            57888999999999999999999 99999999999 8888888875431        2222222     36888888887


Q ss_pred             HHHHHHHH-------HHhhcCCcEEEEeccC
Q 019535          234 ASLVQEAY-------ACCRKGWGKTIVLGVD  257 (339)
Q Consensus       234 ~~~~~~~~-------~~l~~~~G~~v~~g~~  257 (339)
                      ...++..+       ..++++ ..+|+++..
T Consensus        68 ~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi   97 (286)
T COG2084          68 DAAVRAVLFGENGLLEGLKPG-AIVIDMSTI   97 (286)
T ss_pred             HHHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence            66555544       223355 666666543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.05  E-value=0.28  Score=40.60  Aligned_cols=38  Identities=24%  Similarity=0.309  Sum_probs=31.7

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      +|.|+|+|.+|...+.++...|+ +|...+.+++..+.+
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence            58899999999999988888899 999999999876555

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.05  E-value=0.28  Score=46.61  Aligned_cols=102  Identities=11%  Similarity=0.190  Sum_probs=64.7

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHH
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII  217 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~  217 (339)
                      ...+.++++++||-+|+|+ |..++.+++..+..+|++++.++++.+.++    ++|.. .+  .+.+.   ...    .
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~  302 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----S  302 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----c
Confidence            3456778899999998754 555556666665338999999999877664    35654 22  22111   100    0


Q ss_pred             HhcC-CCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTD-GGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~-g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .... +.||.|| |  |+|.                         ...+..+++.++++ |+++..-
T Consensus       303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst  368 (426)
T TIGR00563       303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT  368 (426)
T ss_pred             ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            1112 2799998 4  5543                         23577889999997 9988654

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK06398 aldose dehydrogenase; Validated

Probab=95.04  E-value=0.09  Score=46.09  Aligned_cols=74  Identities=22%  Similarity=0.279  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      .++++||.|+ |.+|.+.+..+...|+ +|+.++++.++..     ... ...|..+  .+.+.+.+.+...  +.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999987 8999999999999999 8999887654322     111 1234333  1233333333221  369999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998873

>PRK06720 hypothetical protein; Provisional

Probab=95.04  E-value=0.23  Score=40.60  Aligned_cols=38  Identities=26%  Similarity=0.214  Sum_probs=31.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF  190 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~  190 (339)
                      .+..++|.|+ +++|...+..+...|+ +|+.++++.+..
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~   53 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG   53 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence            4678899987 7899999988888899 899998876654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.04  E-value=0.22  Score=40.99  Aligned_cols=33  Identities=27%  Similarity=0.226  Sum_probs=29.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +|+|+|+|++|...++.+...|..++..++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998888888764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.04  E-value=0.17  Score=45.74  Aligned_cols=94  Identities=12%  Similarity=0.003  Sum_probs=62.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHH-HhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      ....+++|+|+|..|.+.++.+.. .+.++|.+..+++++.+.+ +++...  .+. .     .+..+.+.     .+|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence            456789999999999998887764 6777899999998876554 334311  111 1     23333332     5899


Q ss_pred             EEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      |+.|+++...+-..+  ++++ -++..+|...
T Consensus       192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~  220 (304)
T PRK07340        192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT  220 (304)
T ss_pred             EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence            999888655332333  6786 7788888654

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=95.03  E-value=0.13  Score=44.90  Aligned_cols=96  Identities=14%  Similarity=0.145  Sum_probs=63.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C----C-----ceEEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G----V-----TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-g----a-----~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..++|||+|+|. |..+-.+++....++|.+++.+++-.+.++++ +    .     .+++.      .+-...+++...
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~~  148 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQE  148 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSSS
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhccC
Confidence            688999998654 55566777776666999999999888888763 1    1     12332      344555555433


Q ss_pred             CCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..+|+|| |...         +.+-++.+.++|+++ |.++.-.
T Consensus       149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            3799998 6554         234588999999997 9988765

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PLN02928 oxidoreductase family protein

Probab=95.01  E-value=0.15  Score=46.85  Aligned_cols=96  Identities=22%  Similarity=0.344  Sum_probs=58.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----C-ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----V-TEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a-~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+.++.|+|.|.+|+.+++.++.+|+ +|++.+++..+... ..++    . ....+... ...++.+.+.+     .|+
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~~-----aDi  229 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAGE-----ADI  229 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHhh-----CCE
Confidence            47899999999999999999999999 99999876332111 1110    0 00010000 01233333322     688


Q ss_pred             EEEcCCCHHH-----HHHHHHHhhcCCcEEEEecc
Q 019535          227 CFECVGLASL-----VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       227 v~d~~g~~~~-----~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |+.+.+....     -...+..|+++ ..+|.++.
T Consensus       230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR  263 (347)
T PLN02928        230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR  263 (347)
T ss_pred             EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence            8887763221     24667788886 77777763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.00  E-value=0.18  Score=44.02  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ +.+|...++.+...|+ +++.++++.++.+.+    +..+.. .+  .|..+  .+.+.+.+.....  
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            3688999987 8999999998888999 888888877665443    223322 22  33333  1222233332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++.+.|.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            378999998873

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.00  E-value=0.48  Score=40.62  Aligned_cols=102  Identities=19%  Similarity=0.217  Sum_probs=60.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh------hHH--HHHHhcC----------------CceEEeCCCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF--EIGKRFG----------------VTEFVNSKNC  207 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~------~~~--~~~~~~g----------------a~~vi~~~~~  207 (339)
                      ..++|+|+|.|++|..++..+...|+.++..++.+.      +++  ......|                ..+|-..++ 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            357899999999999999999999998888776432      111  1111112                112221221 


Q ss_pred             CCccHHHHHHHhcCCCccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535          208 GDKSVSQIIIDMTDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       208 ~~~~~~~~l~~~~~g~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        --..+.+.++...++|+|+||+.+-.. ...+..|.+.+ =.+|..+..
T Consensus       108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga  155 (263)
T COG1179         108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA  155 (263)
T ss_pred             --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence              112234455555689999999987653 23333355554 456665543

>TIGR00417 speE spermidine synthase

Probab=94.97  E-value=0.3  Score=43.30  Aligned_cols=102  Identities=15%  Similarity=0.154  Sum_probs=61.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-C-ceEEeCCCC--CCccHHHHHHHhcCCCccE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-TEFVNSKNC--GDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a-~~vi~~~~~--~~~~~~~~l~~~~~g~~d~  226 (339)
                      ..+++||++|+|. |..+..+++.....++.+++.+++-.+.+++.- . ...++....  ...+..+.+++ ..+.+|+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv  148 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV  148 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence            3456999998764 555666666665558999999988777776521 0 000100000  00233343433 2348999


Q ss_pred             EE-EcC---C------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          227 CF-ECV---G------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      || |..   +      ....++.+.+.|+++ |.++...
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            98 443   1      123367888999998 9988774

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.97  E-value=0.18  Score=44.11  Aligned_cols=78  Identities=18%  Similarity=0.199  Sum_probs=48.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+.++ ++.+.+    .+.+.. .  ..|..+  .+.+.+.+.+..  .
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4689999987 8999999999999999 88888876 332222    223322 1  233333  122222233222  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++++.|.
T Consensus        90 g~id~li~~ag~  101 (258)
T PRK06935         90 GKIDILVNNAGT  101 (258)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.97  E-value=0.35  Score=43.31  Aligned_cols=92  Identities=17%  Similarity=0.161  Sum_probs=54.8

Q ss_pred             CEEEEEccCHHHHH-HHHHHHHcCCCEEEEEc-CChh--HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          154 STVVIFGLGSIGLA-VAEGARLCGATRIIGVD-VISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~G~iG~~-a~~la~~~G~~~Vi~~~-~~~~--~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      -+|.|+|+|.+|.. +..+.+.-+. ++.+++ .+++  .+.+++++|.....       .++.+.+..-.-..+|+||+
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~   76 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD   76 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence            46899999999987 4455554466 555554 4443  34566778754322       22333332100026999999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +++.....+.+..++..  |..++..
T Consensus        77 AT~a~~H~e~a~~a~ea--Gk~VID~  100 (302)
T PRK08300         77 ATSAGAHVRHAAKLREA--GIRAIDL  100 (302)
T ss_pred             CCCHHHHHHHHHHHHHc--CCeEEEC
Confidence            99988755555555555  5544443

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.95  E-value=0.13  Score=46.20  Aligned_cols=84  Identities=14%  Similarity=0.128  Sum_probs=53.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC--CccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG--DKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~--~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|+|+|+|.+|.+.+..+...|. +|..+++++++.+.+++.|...  + +...  .........+.  +.+|+||-|+.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence            58999999999998888888898 8999998777777776655321  1 0000  00000011111  36899999988


Q ss_pred             CHHHHHHHHHHhh
Q 019535          233 LASLVQEAYACCR  245 (339)
Q Consensus       233 ~~~~~~~~~~~l~  245 (339)
                      ... .+.+++.+.
T Consensus        76 ~~~-~~~~~~~l~   87 (304)
T PRK06522         76 AYQ-LPAALPSLA   87 (304)
T ss_pred             ccc-HHHHHHHHh
Confidence            655 444444444

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.95  E-value=0.12  Score=44.53  Aligned_cols=103  Identities=20%  Similarity=0.371  Sum_probs=65.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l  216 (339)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+.+.  ++..+.   .++    
T Consensus        37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~----  108 (231)
T TIGR02752        37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL----  108 (231)
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC----
Confidence            34556778899999999864 6677788877642 289999999888777654    22221  222111   110    


Q ss_pred             HHhcCCCccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       ....+.+|+|+-..     . -...++++.+.|+++ |+++.+..
T Consensus       109 -~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       109 -PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             -CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence             11223799997432     1 133477889999997 99987654

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.94  E-value=0.15  Score=51.30  Aligned_cols=113  Identities=22%  Similarity=0.274  Sum_probs=66.2

Q ss_pred             ccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       107 ~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      ..+|.-+++...+.+ +..+.+++-.-..+          ....-.++++||.|+ |.+|.++++.+...|+ +|+.+++
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r  446 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL  446 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence            355666666666665 55544544321100          001124688999987 8999999999989999 9999998


Q ss_pred             ChhHHHHHHh-----cCCc--e--EEeCCCCCCccHHHHHHHhc--CCCccEEEEcCCC
Q 019535          186 ISEKFEIGKR-----FGVT--E--FVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL  233 (339)
Q Consensus       186 ~~~~~~~~~~-----~ga~--~--vi~~~~~~~~~~~~~l~~~~--~g~~d~v~d~~g~  233 (339)
                      +.++.+.+.+     .+..  .  ..|..+  ...+.+.+.+..  -+++|++|+++|.
T Consensus       447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            8776554421     2321  1  123322  122333333322  2379999998874

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.93  E-value=0.31  Score=44.32  Aligned_cols=88  Identities=24%  Similarity=0.294  Sum_probs=59.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE-c
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE-C  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d-~  230 (339)
                      .|.++.|+|.|.||++.++.++..|+ +|+..++++. .+..+..++.++         ++.+.+++     .|++.- |
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~~-----sDii~l~~  208 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV---------DLDELLAE-----SDIISLHC  208 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec---------cHHHHHHh-----CCEEEEeC
Confidence            48999999999999999999999999 9999998765 333333444322         12222322     577764 4


Q ss_pred             CCCHHH----HHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASL----VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~----~~~~~~~l~~~~G~~v~~g~  256 (339)
                      -.++++    -...++.|+++ ..+|.++.
T Consensus       209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR  237 (324)
T COG1052         209 PLTPETRHLINAEELAKMKPG-AILVNTAR  237 (324)
T ss_pred             CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence            444432    23566778886 77777764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.93  E-value=0.2  Score=43.37  Aligned_cols=83  Identities=19%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--eE--EeCCCCCCccHHHHHHHhc
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~--~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      ..++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+..  .+  .+.......++.+.+..+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            446789999987 8999999988888899 899999887654333    233321  12  2222101123333333322


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  +.+|++|.+++.
T Consensus        88 ~~~~~id~vi~~Ag~  102 (247)
T PRK08945         88 EQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHhCCCCEEEECCcc
Confidence            2  368999987763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.89  E-value=0.18  Score=43.74  Aligned_cols=77  Identities=22%  Similarity=0.362  Sum_probs=49.3

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhc--CCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      .++||.|+ |.+|...+..+...|. +|+++++++++.+.+..    .+.. ..  .|..+  .+++.+.+.+..  .++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence            57999987 9999999988888999 89999998776655433    2322 11  23333  122323222221  236


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999987764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases

Probab=94.88  E-value=0.066  Score=44.04  Aligned_cols=101  Identities=23%  Similarity=0.312  Sum_probs=50.1

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cC--CceEEeCCCCCCccHHHHH-HHhc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG--VTEFVNSKNCGDKSVSQII-IDMT  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~g--a~~vi~~~~~~~~~~~~~l-~~~~  220 (339)
                      .....+.+||-+|+| +|+..+.+++..+..+|+.++.++ -.+.++.    .+  ...-+....   .+|.+.+ .+..
T Consensus        41 ~~~~~~~~VLELGaG-~Gl~gi~~a~~~~~~~Vv~TD~~~-~l~~l~~Ni~~N~~~~~~~v~v~~---L~Wg~~~~~~~~  115 (173)
T PF10294_consen   41 PELFRGKRVLELGAG-TGLPGIAAAKLFGAARVVLTDYNE-VLELLRRNIELNGSLLDGRVSVRP---LDWGDELDSDLL  115 (173)
T ss_dssp             GGGTTTSEEEETT-T-TSHHHHHHHHT-T-SEEEEEE-S--HHHHHHHHHHTT--------EEEE-----TTS-HHHHHH
T ss_pred             hhhcCCceEEEECCc-cchhHHHHHhccCCceEEEeccch-hhHHHHHHHHhccccccccccCcE---EEecCccccccc
Confidence            345678899999986 566666666665666999999876 5555543    12  011111111   2222222 2223


Q ss_pred             CC-CccEEE--EcCCCH----HHHHHHHHHhhcCCcEEEEec
Q 019535          221 DG-GADYCF--ECVGLA----SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g-~~d~v~--d~~g~~----~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .. .||+||  |++=.+    ..++.+..++.++ +. +.++
T Consensus       116 ~~~~~D~IlasDv~Y~~~~~~~L~~tl~~ll~~~-~~-vl~~  155 (173)
T PF10294_consen  116 EPHSFDVILASDVLYDEELFEPLVRTLKRLLKPN-GK-VLLA  155 (173)
T ss_dssp             S-SSBSEEEEES--S-GGGHHHHHHHHHHHBTT--TT-EEEE
T ss_pred             ccccCCEEEEecccchHHHHHHHHHHHHHHhCCC-CE-EEEE
Confidence            34 899998  666543    3355666677776 66 4443

They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A.

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.88  E-value=0.32  Score=43.34  Aligned_cols=88  Identities=18%  Similarity=0.266  Sum_probs=56.4

Q ss_pred             EEEEEccCHHHHHH-HHHHHHcCCCEEEEEc-CChhH--HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGLGSIGLAV-AEGARLCGATRIIGVD-VISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~a-~~la~~~G~~~Vi~~~-~~~~~--~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|.|+|+|.+|... ..+.+..++ ++.+++ .++++  +++++++|.....+       ++.+.+.   ...+|+||++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia   71 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA   71 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence            68899999999855 566665567 666554 34443  45677788654431       2222221   1269999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ++.....+.+..++..  |..++..
T Consensus        72 Tp~~~H~e~a~~al~a--Gk~VIde   94 (285)
T TIGR03215        72 TSAKAHARHARLLAEL--GKIVIDL   94 (285)
T ss_pred             CCcHHHHHHHHHHHHc--CCEEEEC
Confidence            9998866666666666  5555543

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.88  E-value=0.22  Score=42.96  Aligned_cols=79  Identities=22%  Similarity=0.231  Sum_probs=50.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      ++.++||.|+ |.+|..+++.+...|+ .|+...++.++.+.+ ..++.. .+  .|..+  .+.+.+.+.+..  -+++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            3678999987 9999999988888998 888888777665544 333321 22  22222  122222222221  1379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|.+.|.
T Consensus        82 d~vi~~ag~   90 (245)
T PRK12936         82 DILVNNAGI   90 (245)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.87  E-value=0.39  Score=41.62  Aligned_cols=74  Identities=26%  Similarity=0.320  Sum_probs=47.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.++++.     .+..+.. ..  .|..+  .+.+.+.+.+...  +.+|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   78 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            3578999987 8999999998888999 899998765     2222211 11  23332  1223333333221  3689


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|++.|.
T Consensus        79 ~vi~~ag~   86 (252)
T PRK08220         79 VLVNAAGI   86 (252)
T ss_pred             EEEECCCc
Confidence            99998874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.86  E-value=0.13  Score=45.49  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc------eEEeCCCC-CCccHHHHHHHh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNC-GDKSVSQIIIDM  219 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~------~vi~~~~~-~~~~~~~~l~~~  219 (339)
                      .+..+||.|+ .++|.+.+..+...|+ +|+.+.+++++.+..++    .+..      .+.|..+. ....+.+...+.
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            5677888887 7999999999999999 99999999887655432    2221      23333330 011122233333


Q ss_pred             cCCCccEEEEcCCC
Q 019535          220 TDGGADYCFECVGL  233 (339)
Q Consensus       220 ~~g~~d~v~d~~g~  233 (339)
                      ..|++|+.++..|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            34589999997764

>PRK12743 oxidoreductase; Provisional

Probab=94.86  E-value=0.22  Score=43.45  Aligned_cols=78  Identities=18%  Similarity=0.081  Sum_probs=47.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHH----HHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI----GKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~----~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      ++++||.|+ |.+|..+++.+...|+ +|+.+.+ +.++.+.    ++..+.. +.  .|..+  .+.+.+.+.+...  
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            468999987 8999999999999999 7877654 4333322    2334532 22  23333  2222232333221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.+.|.
T Consensus        79 ~~id~li~~ag~   90 (256)
T PRK12743         79 GRIDVLVNNAGA   90 (256)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.86  E-value=0.44  Score=40.70  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=29.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEE-cCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGV-DVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~-~~~~  187 (339)
                      .+.+|+|+|-|.+|+.+++++...|. +++++ +.+.
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~-~vV~vsD~~g   57 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGG-KVLAVSDPDG   57 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            57899999999999999999999999 55554 4444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.84  E-value=0.21  Score=43.58  Aligned_cols=79  Identities=22%  Similarity=0.185  Sum_probs=49.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      .+.+++|.|+ |.+|...++.+...|+ +|+.+.++ ++..+.++..+... ..|..+  .+.+.+.+.+...  +++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            3678999987 8999999999988999 78776543 33344444334322 234333  1233333333221  37999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.83  E-value=0.24  Score=45.72  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=31.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ...+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            357899999999999999999999998988887654

>PLN02256 arogenate dehydrogenase

Probab=94.80  E-value=0.6  Score=42.15  Aligned_cols=97  Identities=12%  Similarity=0.167  Sum_probs=61.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +.+...-....+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|+.. .  .     +..+.+    ...
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~-----~~~e~~----~~~   92 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R-----DPDDFC----EEH   92 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C-----CHHHHh----hCC
Confidence            3444444566789999999999999888888898 8999988764 35556667531 1  1     222211    124


Q ss_pred             ccEEEEcCCCHHHHHHHHHH-----hhcCCcEEEEecc
Q 019535          224 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~  256 (339)
                      .|+||-|+.... ....++-     +.++ ..++.++.
T Consensus        93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence            789998888655 3443333     3454 55666654

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.79  E-value=0.14  Score=45.28  Aligned_cols=47  Identities=23%  Similarity=0.084  Sum_probs=39.1

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      +...+.+++|+|+|+.+++++.-+...|+++|+++.|++++.+.+.+
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~  164 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAE  164 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            34455689999999999999999999999789999999887766543

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=94.79  E-value=0.21  Score=46.17  Aligned_cols=102  Identities=23%  Similarity=0.313  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEEc-c-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce--EEeCCCCCCccHHHHHH
Q 019535          146 RTANVEVGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE--FVNSKNCGDKSVSQIII  217 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G-~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~~~~~l~  217 (339)
                      ..++.++|++||-.- + |+--...+++....|. .|++.+.++.+...+    +++|...  +++.++   ..+.   .
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~---~~~~---~  222 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA---RRLA---E  222 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc---cccc---c
Confidence            457789999999994 3 5444444555555566 789999999988776    4588764  333332   1111   1


Q ss_pred             HhcCC-CccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDG-GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g-~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ....+ .||.|+ |  |+|.                         ...+..+++.++++ |++|-.-
T Consensus       223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYST  288 (355)
T COG0144         223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYST  288 (355)
T ss_pred             cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEc
Confidence            11222 489987 5  7765                         33578889999997 8776543

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.22  Score=43.81  Aligned_cols=76  Identities=22%  Similarity=0.219  Sum_probs=47.9

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--CCCc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      ++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+    +..+.. .++  |..+  .+++.+.+.+..  .+++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI   78 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            6899987 8999999988888999 899999887665433    223322 222  2222  122222222221  1379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.74  E-value=0.22  Score=43.99  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=48.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      ..++||.|+ |.+|...++.+...|+ +|++++++.++.+.+    +..+... .  .|..+  .+.+.+.+.+..  .+
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   86 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence            458999987 9999999998888999 898888876654332    2234321 2  23322  122222232221  23


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|.++|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            68999998874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.73  E-value=0.31  Score=43.99  Aligned_cols=81  Identities=21%  Similarity=0.281  Sum_probs=47.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHH----HHHhcCCceEEeCCCCCCccHHHHHHHh-c-CCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTEFVNSKNCGDKSVSQIIIDM-T-DGG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~----~~~~~ga~~vi~~~~~~~~~~~~~l~~~-~-~g~  223 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+..+++. ++.+    .++..|.......-+....+-.+.+.+. . -++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4678999987 8999999998888999 888887642 2222    2233343222211121112222222211 1 247


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|+++|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.73  E-value=0.22  Score=42.53  Aligned_cols=93  Identities=13%  Similarity=0.074  Sum_probs=57.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      ++.+|||+|+|.++.-=++.+...|+ +|.+++..-. ....+.+.|....+. +++...+       +  .++++||-|
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~d-------l--~g~~LViaA   92 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKEF-------I--KDKHLIVIA   92 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHH-------h--CCCcEEEEC
Confidence            46789999999999877778888899 8888865432 222232334323332 2211111       1  268999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++.+..-+......... +.++....
T Consensus        93 TdD~~vN~~I~~~a~~~-~~lvn~vd  117 (223)
T PRK05562         93 TDDEKLNNKIRKHCDRL-YKLYIDCS  117 (223)
T ss_pred             CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence            99998444555555554 66666543

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.29  Score=42.29  Aligned_cols=76  Identities=20%  Similarity=0.170  Sum_probs=47.7

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c-CCc-eEE--eCCCCCCccHHHHHHHhcCCCc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F-GVT-EFV--NSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~-ga~-~vi--~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      .+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+.+    . +.. .++  |..+  ..++.+.+.+. ...+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSL-PALP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHH-hhcC
Confidence            47899987 9999999998888999 89999998876544321    1 111 222  2222  12233333322 2257


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+++.+.|.
T Consensus        78 d~vv~~ag~   86 (243)
T PRK07102         78 DIVLIAVGT   86 (243)
T ss_pred             CEEEECCcC
Confidence            999987764

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.28  Score=43.50  Aligned_cols=77  Identities=23%  Similarity=0.347  Sum_probs=48.6

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc-CCCc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT-DGGA  224 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~-~g~~  224 (339)
                      +++++|.|+|.+|..+++.+. .|+ +|+.+++++++.+.+    +..+.. .  ..|..+  .+.+.+.+.+.. .+++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence            457788898899999998874 798 899999887665433    222322 1  234333  223333333321 1479


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.68  E-value=0.2  Score=43.99  Aligned_cols=79  Identities=20%  Similarity=0.324  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCC---hhHHHHH-HhcCCce--EEeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTE--FVNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~-~~~ga~~--vi~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   +++|.++++.+...|+ +|+.+.+.   +++.+.+ ++++...  ..|..+  .+.+.+.+..... 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   81 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH   81 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence            4678999983   5899999988888999 88877543   2333332 3344322  233333  2334444433322 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|+++++.|.
T Consensus        82 ~g~iD~lvnnAG~   94 (260)
T PRK06997         82 WDGLDGLVHSIGF   94 (260)
T ss_pred             hCCCcEEEEcccc
Confidence             479999998763

>TIGR00452 methyltransferase, putative

Probab=94.63  E-value=0.17  Score=45.74  Aligned_cols=99  Identities=13%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH---HHhc-CC---ceEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRF-GV---TEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~~-ga---~~vi~~~~~~~~~~~~~l  216 (339)
                      +.......++++||-+|+|. |..+..++.. |+..|++++.++.....   ++++ +.   .+++.      .++    
T Consensus       113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~------~~i----  180 (314)
T TIGR00452       113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP------LGI----  180 (314)
T ss_pred             HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE------CCH----
Confidence            44445567789999999875 6666666654 66589999988865443   2222 21   12221      111    


Q ss_pred             HHhcCC-CccEEEEcC-----CCH-HHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDG-GADYCFECV-----GLA-SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g-~~d~v~d~~-----g~~-~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .++... .||+||...     .++ ..++++.++|+++ |++++-.
T Consensus       181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvlet  225 (314)
T TIGR00452       181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLET  225 (314)
T ss_pred             HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEEE
Confidence            122222 799998532     222 4588999999998 9998753

Known examples to date are restricted to the proteobacteria.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.63  E-value=0.25  Score=44.54  Aligned_cols=35  Identities=29%  Similarity=0.303  Sum_probs=31.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++|.|+|.|.+|+..+++++.+|+ +|++.+++.
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~  155 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY  155 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence            47899999999999999999999999 999998763

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.63  E-value=0.15  Score=46.11  Aligned_cols=95  Identities=14%  Similarity=0.058  Sum_probs=56.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCceEEeCCCCCCccHH-HHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVS-QIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~~~-~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|+|+|+|++|...+-.+...|. .|..+.+++++.+.+++- |. .+.+...  ...+. ........+.+|+||-|+-
T Consensus         4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~--~~~~~~~~~~~~~~~~~D~viv~vK   79 (305)
T PRK05708          4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQ--ASLYAIPAETADAAEPIHRLLLACK   79 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCc--ceeeccCCCCcccccccCEEEEECC
Confidence            69999999999888777777898 899999887777777643 42 1211111  00000 0000001136899999886


Q ss_pred             CHH---HHHHHHHHhhcCCcEEEEe
Q 019535          233 LAS---LVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       233 ~~~---~~~~~~~~l~~~~G~~v~~  254 (339)
                      +..   .++.+...+.++ ..++.+
T Consensus        80 ~~~~~~al~~l~~~l~~~-t~vv~l  103 (305)
T PRK05708         80 AYDAEPAVASLAHRLAPG-AELLLL  103 (305)
T ss_pred             HHhHHHHHHHHHhhCCCC-CEEEEE
Confidence            654   233344445565 555555

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.62  E-value=0.58  Score=40.01  Aligned_cols=101  Identities=19%  Similarity=0.182  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEE---------eCCCCCCccHHHHHHH
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV---------NSKNCGDKSVSQIIID  218 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi---------~~~~~~~~~~~~~l~~  218 (339)
                      ...++.+||+.|+|. |.-++-||. .|+ .|++++.++...+.+. +.+.....         ...+  ..-+...+.+
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~~  108 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFFA  108 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECcccC
Confidence            445678999999873 777777775 799 9999999998887652 23221000         0000  0000000111


Q ss_pred             hc--C-CCccEEEEcCC--------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MT--D-GGADYCFECVG--------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~--~-g~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.  . +.||.|+|..-        -...++.+.++|+++ |+++++.
T Consensus       109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~  155 (218)
T PRK13255        109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT  155 (218)
T ss_pred             CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence            11  1 26899998552        133478899999997 9766544

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.25  Score=43.74  Aligned_cols=36  Identities=39%  Similarity=0.426  Sum_probs=30.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4578999987 8999999998888999 8999987653

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.87  Score=39.49  Aligned_cols=38  Identities=24%  Similarity=0.168  Sum_probs=29.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKF  190 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~  190 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+.+. +++++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~   42 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA   42 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence            3678999987 8999999999999999 777764 444443

>PLN00016 RNA-binding protein; Provisional

Probab=94.60  E-value=0.44  Score=44.41  Aligned_cols=97  Identities=15%  Similarity=0.119  Sum_probs=61.2

Q ss_pred             CCCCEEEEE----cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-----------HHhcCCceEEeCCCCCCccHHH
Q 019535          151 EVGSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQ  214 (339)
Q Consensus       151 ~~~~~VLI~----G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-----------~~~~ga~~vi~~~~~~~~~~~~  214 (339)
                      ....+|||+    |+ |-+|..+++.+...|. +|+++++++.....           +...|...+.       .++.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d  121 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD  121 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH
Confidence            344689999    97 9999999998888999 99999987654221           1223443332       22222


Q ss_pred             HHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcC-CcEEEEecc
Q 019535          215 IIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKG-WGKTIVLGV  256 (339)
Q Consensus       215 ~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~-~G~~v~~g~  256 (339)
                       +.+.... ++|+||++.+.. .....+++.+... -.++|.++.
T Consensus       122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence             3333333 899999987643 2245566666543 136777664

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.18  Score=44.08  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=46.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~v  227 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++++....   .-... ...|..+  .+.+.+.+.+..  .+++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 8999999998888999 8999988754321   10111 1223333  122222222221  1379999


Q ss_pred             EEcCC
Q 019535          228 FECVG  232 (339)
Q Consensus       228 ~d~~g  232 (339)
                      |+++|
T Consensus        82 i~~ag   86 (260)
T PRK06523         82 VHVLG   86 (260)
T ss_pred             EECCc
Confidence            99887

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.59  E-value=0.3  Score=48.75  Aligned_cols=77  Identities=17%  Similarity=0.277  Sum_probs=58.3

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+. -+.    .-.+.+++..-..+|.++-+++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence            3679999999999999999999999 899999999999999988864332 222    1122333332238999999998


Q ss_pred             CHH
Q 019535          233 LAS  235 (339)
Q Consensus       233 ~~~  235 (339)
                      +..
T Consensus       474 d~~  476 (621)
T PRK03562        474 DPQ  476 (621)
T ss_pred             CHH
Confidence            865

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.58  E-value=0.72  Score=41.92  Aligned_cols=39  Identities=21%  Similarity=0.153  Sum_probs=34.0

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      .+|.|+|+|.+|...++.+...|+ +|+..+.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            679999999999999998889999 999999988765543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.55  E-value=0.2  Score=46.13  Aligned_cols=75  Identities=13%  Similarity=0.082  Sum_probs=48.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC--Cc-eEE--eCCCCCCccHHHHHHHhcCC-C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VT-EFV--NSKNCGDKSVSQIIIDMTDG-G  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g--a~-~vi--~~~~~~~~~~~~~l~~~~~g-~  223 (339)
                      .+.+|||.|+ |.+|..+++.+...|. +|+++++++...... +.++  .. ..+  |..+      .+.+.++..+ +
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~------~~~~~~~~~~~~   75 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD------AAKLRKAIAEFK   75 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC------HHHHHHHHhhcC
Confidence            3578999987 9999999999999999 899988766543221 1221  11 112  2222      2234444444 6


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+||++++.
T Consensus        76 ~d~vih~A~~   85 (349)
T TIGR02622        76 PEIVFHLAAQ   85 (349)
T ss_pred             CCEEEECCcc
Confidence            8999998873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.51  E-value=1.2  Score=39.23  Aligned_cols=101  Identities=14%  Similarity=0.157  Sum_probs=63.0

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++++++||-.|+|+ |..++.++..++ ...|++++.++++.+.++    .+|...+-...    .+... +.. ..
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~----~D~~~-~~~-~~  138 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN----FDGRV-FGA-AV  138 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec----CCHHH-hhh-hc
Confidence            34678899999998764 555566666553 227999999999887764    35654322111    12211 111 12


Q ss_pred             CCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.||.|+ |  |+|.                         ...++.+++.++++ |+++...
T Consensus       139 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst  199 (264)
T TIGR00446       139 PKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST  199 (264)
T ss_pred             cCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            3699997 4  4543                         12577888899997 9887543

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.2  Score=42.57  Aligned_cols=74  Identities=15%  Similarity=0.104  Sum_probs=46.8

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCC--CccEEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g--~~d~v~d  229 (339)
                      .++||.|+ |.+|...+..+... + +|+++++++++.+.+.+ .....++..+-   .+ .+.+.+...+  ++|.+|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence            57999987 89999888777666 7 89999998777655543 21122222221   12 2233333332  6999999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      ++|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            8874

>PLN02735 carbamoyl-phosphate synthase

Probab=94.51  E-value=0.55  Score=49.96  Aligned_cols=98  Identities=12%  Similarity=0.159  Sum_probs=59.1

Q ss_pred             hhhhhhHHHHHhcCCCCCCEEEEEccCHH-----------HHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-Ee
Q 019535          136 GVSTGVGAAWRTANVEVGSTVVIFGLGSI-----------GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VN  203 (339)
Q Consensus       136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~i-----------G~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~  203 (339)
                      ....||.+.....+-..-.+|||+|+|++           |..++.-++..|+ +|+.++.++........+ ++++ +.
T Consensus         6 ~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~   83 (1102)
T PLN02735          6 TVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIA   83 (1102)
T ss_pred             cceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeC
Confidence            34456665444333334479999999864           4557888889999 999999877432111111 3333 22


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHH
Q 019535          204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY  241 (339)
Q Consensus       204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~  241 (339)
                      ..+      .+.+.++... ++|.|+-+.|+...++.+.
T Consensus        84 p~~------~e~v~~ii~~e~~D~Iip~~gg~~gl~la~  116 (1102)
T PLN02735         84 PMT------PELVEQVIAKERPDALLPTMGGQTALNLAV  116 (1102)
T ss_pred             CCC------HHHHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence            222      2334444434 8999999888766454443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.50  E-value=0.54  Score=40.38  Aligned_cols=70  Identities=13%  Similarity=0.202  Sum_probs=49.6

Q ss_pred             EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          156 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       156 VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      |+|.|+ |.+|...++.+...+. +|.++.|+..  ..+.++..|+..+ ..+-    +-.+.+.+... ++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence            789987 9999999999999888 8999998763  3555677888544 3332    22333443333 6999998888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.50  E-value=0.42  Score=42.77  Aligned_cols=93  Identities=18%  Similarity=0.259  Sum_probs=64.2

Q ss_pred             cccchhhhhhHHHHHhcCC-CCCCEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHHHhcCCceEEeCCCCC
Q 019535          132 LLSCGVSTGVGAAWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG  208 (339)
Q Consensus       132 ~l~~~~~ta~~al~~~~~~-~~~~~VLI~G-~G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~~ga~~vi~~~~~~  208 (339)
                      .+||.....+. +++..++ -.|.+|+|+| .+.+|.-.+.++...|+ .|++.. +++                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            45654333333 4444443 4689999999 58999999999999999 888874 332                     


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        ++.+.++     ..|+|+-++|.+..++..+  ++++ ..++++|..
T Consensus       194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence              1111111     3799999999988666554  8886 888888864

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.49  E-value=0.57  Score=42.14  Aligned_cols=89  Identities=17%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+++.|....   .     +..+....+  ...|+||-++...
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~---~-----s~~~~~~~~--~~~dvIi~~vp~~   70 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV---A-----NLRELSQRL--SAPRVVWVMVPHG   70 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc---C-----CHHHHHhhc--CCCCEEEEEcCch
Confidence            58899999999988888888898 89999999999888877664321   1     111111111  1468888887765


Q ss_pred             HHHHH----HHHHhhcCCcEEEEecc
Q 019535          235 SLVQE----AYACCRKGWGKTIVLGV  256 (339)
Q Consensus       235 ~~~~~----~~~~l~~~~G~~v~~g~  256 (339)
                      . .+.    +...+.++ -.++..+.
T Consensus        71 ~-~~~v~~~l~~~l~~g-~ivid~st   94 (298)
T TIGR00872        71 I-VDAVLEELAPTLEKG-DIVIDGGN   94 (298)
T ss_pred             H-HHHHHHHHHhhCCCC-CEEEECCC
Confidence            3 333    33344443 44555443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.49  E-value=0.31  Score=48.04  Aligned_cols=76  Identities=11%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      ++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.- +.    .-.+.+++..-..+|.++-++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~----~~~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NA----ANEEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CC----CCHHHHHhcCccccCEEEEEcCC
Confidence            678999999999999999999999 8999999999999999888654432 22    11233333322378988877665


Q ss_pred             HH
Q 019535          234 AS  235 (339)
Q Consensus       234 ~~  235 (339)
                      ..
T Consensus       492 ~~  493 (558)
T PRK10669        492 GY  493 (558)
T ss_pred             hH
Confidence            43

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=94.48  E-value=0.083  Score=47.29  Aligned_cols=91  Identities=13%  Similarity=0.187  Sum_probs=57.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      ++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.    +.. .+..      .++.+.  . ..+.+|+
T Consensus       120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~------~D~~~~--~-~~~~fD~  187 (287)
T PRK12335        120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGL------YDINSA--S-IQEEYDF  187 (287)
T ss_pred             CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEE------echhcc--c-ccCCccE
Confidence            456899998863 666666666 488 999999999887776542    321 1111      111110  1 1337999


Q ss_pred             EEEcCC--------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          227 CFECVG--------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+...-        -...++.+.+.++++ |.++.+.
T Consensus       188 I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v~  223 (287)
T PRK12335        188 ILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIVC  223 (287)
T ss_pred             EEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            986431        133477888899997 9866654

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.47  E-value=0.34  Score=46.78  Aligned_cols=69  Identities=28%  Similarity=0.291  Sum_probs=48.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-----HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-----~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+++|+|+|+|.+|+.++.+++..|. +|++++..+.     ..+.+++.|.........   .         ....+|+
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~---------~~~~~D~   81 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T---------LPEDTDL   81 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c---------ccCCCCE
Confidence            46789999999999999999999999 8998875542     234456677654443222   1         0115788


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      |+-+.|-
T Consensus        82 Vv~s~Gi   88 (480)
T PRK01438         82 VVTSPGW   88 (480)
T ss_pred             EEECCCc
Confidence            8877765

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.47  E-value=0.31  Score=42.79  Aligned_cols=79  Identities=23%  Similarity=0.411  Sum_probs=50.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ +.+|...+..+...|+ +|+.+.+++++.+.+    ++.+.. .  ..|..+  ...+.+.+.+...  
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence            4678999987 8999999988888999 888888887665443    223432 1  233333  1222222222221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|++.|.
T Consensus        86 ~~id~li~~ag~   97 (265)
T PRK07097         86 GVIDILVNNAGI   97 (265)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.47  E-value=0.52  Score=44.57  Aligned_cols=73  Identities=25%  Similarity=0.338  Sum_probs=51.7

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh---------cCC-C
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---------TDG-G  223 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~---------~~g-~  223 (339)
                      .+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |...+   .+   ..+.+.+++.         +.- .
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e---~~l~~~l~~~~~~g~l~~~~~~~~   75 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VE---PDLDMVVKTAVEGGYLRATTTPEP   75 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CC---CCHHHHHHHHhhcCceeeeccccc
Confidence            479999999999999888888899 99999999998887653 32221   22   3333333321         111 5


Q ss_pred             ccEEEEcCCCH
Q 019535          224 ADYCFECVGLA  234 (339)
Q Consensus       224 ~d~v~d~~g~~  234 (339)
                      .|++|-|++.+
T Consensus        76 aDvvii~vptp   86 (415)
T PRK11064         76 ADAFLIAVPTP   86 (415)
T ss_pred             CCEEEEEcCCC
Confidence            89999999985

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.45  E-value=0.77  Score=41.36  Aligned_cols=43  Identities=26%  Similarity=0.326  Sum_probs=37.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  198 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga  198 (339)
                      +|.++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~   44 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA   44 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence            58899999999988888888899 89999999988887777664

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.45  E-value=0.36  Score=43.04  Aligned_cols=79  Identities=22%  Similarity=0.233  Sum_probs=48.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hHHHHH----HhcCCc-eE--EeCCCCCCccHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEIG----KRFGVT-EF--VNSKNCGDKSVSQ  214 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~  214 (339)
                      .+.++||.|+ +++|.+.++.+...|+ +|+.++++.         ++.+.+    +..+.. ..  .|..+  .++..+
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~   81 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAAN   81 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHHH
Confidence            5788999987 8999999998888999 888877653         332222    222322 12  23332  223333


Q ss_pred             HHHHhcC--CCccEEEEcCCC
Q 019535          215 IIIDMTD--GGADYCFECVGL  233 (339)
Q Consensus       215 ~l~~~~~--g~~d~v~d~~g~  233 (339)
                      .+.+...  +.+|++|++.|.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            3333221  479999998874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.44  E-value=0.3  Score=42.03  Aligned_cols=79  Identities=25%  Similarity=0.297  Sum_probs=47.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|...+..+...|+ +|+++.+++.. .+.    ++..+.. .++  |..+  .+.+.+.+.+... 
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3468999987 9999999999988999 78676665442 221    2222322 222  3332  2223333333322 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|.+|.++|.
T Consensus        81 ~~~id~vi~~ag~   93 (248)
T PRK05557         81 FGGVDILVNNAGI   93 (248)
T ss_pred             cCCCCEEEECCCc
Confidence             368999998864

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.44  E-value=0.27  Score=44.99  Aligned_cols=99  Identities=17%  Similarity=0.176  Sum_probs=63.0

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .++.+||-+|+|. |..+..+++..+..++++++.+++..+.+++.....-+....   .+..+ + ....+.||+|+.+
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~---gD~e~-l-p~~~~sFDvVIs~  185 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE---GDAED-L-PFPTDYADRYVSA  185 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe---ccHHh-C-CCCCCceeEEEEc
Confidence            4578999999875 777778887765448999999988887776532110011111   12211 0 1112369998853


Q ss_pred             C-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          231 V-----G-LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~-----g-~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .     . ....++++.+.|+++ |++++++.
T Consensus       186 ~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        186 GSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             ChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            2     1 234588999999998 99988754

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=94.42  E-value=0.56  Score=42.16  Aligned_cols=71  Identities=23%  Similarity=0.299  Sum_probs=49.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.++     ..|+||-|+...
T Consensus         3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~~~~--------~s~~~~~~-----~aDvVi~~vp~~   68 (296)
T PRK15461          3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGATPA--------ASPAQAAA-----GAEFVITMLPNG   68 (296)
T ss_pred             eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence            68899999999988888888898 89999999998888776664211        12222221     357888777766


Q ss_pred             HHHHH
Q 019535          235 SLVQE  239 (339)
Q Consensus       235 ~~~~~  239 (339)
                      ..++.
T Consensus        69 ~~~~~   73 (296)
T PRK15461         69 DLVRS   73 (296)
T ss_pred             HHHHH
Confidence            43333

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.42  E-value=0.49  Score=39.75  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=30.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|.-.+..+-..|.+++..++.+
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            35689999999999999999999999888888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14030 glutamate dehydrogenase; Provisional

Probab=94.42  E-value=1.6  Score=41.39  Aligned_cols=31  Identities=32%  Similarity=0.547  Sum_probs=28.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGV  183 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~  183 (339)
                      .+.+|+|+|-|.+|+.+++++...|+ +|+++
T Consensus       227 ~g~~vaIQGfGnVG~~aA~~L~e~Ga-kvVav  257 (445)
T PRK14030        227 KGKTVAISGFGNVAWGAATKATELGA-KVVTI  257 (445)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEE
Confidence            58899999999999999999999999 88884

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.40  E-value=0.29  Score=42.17  Aligned_cols=78  Identities=23%  Similarity=0.336  Sum_probs=47.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      +.++||.|+ |.+|...+..+...|+ +|+.+ .+++++.+.+..    .+.. .++  |..+  .+.+.+.+.+...  
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            468999987 9999999988888899 88888 877665543322    2221 222  2222  1222232322221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (247)
T PRK05565         82 GKIDILVNNAGI   93 (247)
T ss_pred             CCCCEEEECCCc
Confidence            369999998864

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.40  E-value=0.15  Score=38.54  Aligned_cols=93  Identities=25%  Similarity=0.364  Sum_probs=57.6

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      |.+||..|+|. |..++.+++.... ++++++.++...+.++.    .+.   ..++.      .++.+....+..+.+|
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~~~-~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D   72 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRGAA-RVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD   72 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHCTC-EEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHCCC-eEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence            45788887642 4455555554434 99999999998887764    232   12222      4554444334344999


Q ss_pred             EEEEcCCC--------------HHHHHHHHHHhhcCCcEEEEe
Q 019535          226 YCFECVGL--------------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       226 ~v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +|+-.-+-              ...++.+.+.|+++ |.++.+
T Consensus        73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            99853221              23478999999997 988776

...

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.40  E-value=0.55  Score=40.32  Aligned_cols=104  Identities=17%  Similarity=0.288  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhcCC----ceEEeCCCCCCccHHHHHHHh
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRFGV----TEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~ga----~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ......++.+||.+|+|. |..+..+++..+  . ++++++.+++..+.+++.-.    ...++...   .+..+.  ..
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~--~~  117 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTG-EVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ---GDAEAL--PF  117 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHhhcccccccCeEEEe---cccccC--CC
Confidence            344556778999999876 788888888775  5 99999999888777765321    11111111   111110  11


Q ss_pred             cCCCccEEEEcC------CCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..+.+|+|+...      .-...++.+.+.|+++ |.++.+...
T Consensus       118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~  160 (239)
T PRK00216        118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS  160 (239)
T ss_pred             CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence            123689987422      1234478889999998 998887653

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=94.38  E-value=0.22  Score=47.93  Aligned_cols=104  Identities=15%  Similarity=0.185  Sum_probs=66.1

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc--CCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~--ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+...++++.+||-+|+|. |..+..+++..++ +|++++.+++..+.+++.  +...-+....   .++.+  ..+..+
T Consensus       259 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~---~d~~~--~~~~~~  331 (475)
T PLN02336        259 VDKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV---ADCTK--KTYPDN  331 (475)
T ss_pred             HHhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE---cCccc--CCCCCC
Confidence            3445567788999999864 6666778887788 999999999888877542  2110011111   11111  011123


Q ss_pred             CccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .||+|+...     . ....++.+.+.|+++ |+++....
T Consensus       332 ~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~  370 (475)
T PLN02336        332 SFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY  370 (475)
T ss_pred             CEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            699998532     1 234588999999998 99887653

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.35  E-value=0.41  Score=44.45  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=31.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35689999999999999999999999888888765

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.33  E-value=0.65  Score=41.94  Aligned_cols=87  Identities=25%  Similarity=0.281  Sum_probs=58.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +.        ++.+.++     ..|+|+-+
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~ll   78 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQML   78 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEEe
Confidence            357899999999999999999999999 888876655555556666653 21        2233332     37999988


Q ss_pred             CCCHHH---H-HHHHHHhhcCCcEEEEe
Q 019535          231 VGLASL---V-QEAYACCRKGWGKTIVL  254 (339)
Q Consensus       231 ~g~~~~---~-~~~~~~l~~~~G~~v~~  254 (339)
                      .+.+..   + +..+..|+++  .++.+
T Consensus        79 LPd~~t~~V~~~eil~~MK~G--aiL~f  104 (335)
T PRK13403         79 LPDEQQAHVYKAEVEENLREG--QMLLF  104 (335)
T ss_pred             CCChHHHHHHHHHHHhcCCCC--CEEEE
Confidence            876442   2 2345556664  44444

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.32  E-value=0.32  Score=42.14  Aligned_cols=79  Identities=16%  Similarity=0.160  Sum_probs=47.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEE-EcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|+.+++.+...|+ +|+. ..++.++.+.+    +..+.. .+  .|..+  ..++...+.+... 
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3578999987 8999999999999999 7665 45555543332    333432 22  23222  2223333333221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|++.|.
T Consensus        80 ~~~id~vi~~ag~   92 (250)
T PRK08063         80 FGRLDVFVNNAAS   92 (250)
T ss_pred             cCCCCEEEECCCC
Confidence             368999998873

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.32  E-value=0.33  Score=48.20  Aligned_cols=93  Identities=10%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+.    .-.+.+++..-..+|.++-+.++
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vv~~~~d  474 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA----TQLELLRAAGAEKAEAIVITCNE  474 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC----CCHHHHHhcCCccCCEEEEEeCC
Confidence            579999999999999999999999 899999999999999998865433 222    11223333322389999999988


Q ss_pred             HHHHHHH---HHHhhcCCcEEEE
Q 019535          234 ASLVQEA---YACCRKGWGKTIV  253 (339)
Q Consensus       234 ~~~~~~~---~~~l~~~~G~~v~  253 (339)
                      ...-...   .+...++ -+++.
T Consensus       475 ~~~n~~i~~~~r~~~p~-~~Iia  496 (601)
T PRK03659        475 PEDTMKIVELCQQHFPH-LHILA  496 (601)
T ss_pred             HHHHHHHHHHHHHHCCC-CeEEE
Confidence            6633233   3334454 45444

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.35  Score=43.69  Aligned_cols=34  Identities=18%  Similarity=0.202  Sum_probs=29.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .+.++||.|+ +++|.++++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4678999987 8999999999999999 89988876

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=94.27  E-value=1.2  Score=42.30  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=30.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      -.+.+|+|.|.|.+|+.+++.+..+|+ +|++++.+
T Consensus       235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~  269 (454)
T PTZ00079        235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDS  269 (454)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcC
Confidence            368899999999999999999999999 88855543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.26  E-value=0.3  Score=45.78  Aligned_cols=105  Identities=15%  Similarity=0.208  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH-------HHHhc-CCceE-EeCCCCCCccHHHHHHH
Q 019535          149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID  218 (339)
Q Consensus       149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~-------~~~~~-ga~~v-i~~~~~~~~~~~~~l~~  218 (339)
                      +...+.+|||.|+ |.+|..+++.+...|. +|++++++..+.+       ..+.. ++..+ .|..+  .+.+.+.++.
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~  132 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS  132 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence            3456789999987 9999999998888999 8999998764321       11112 23222 33333  1222222222


Q ss_pred             hcCCCccEEEEcCCCH------------HHHHHHHHHhhcC-CcEEEEeccC
Q 019535          219 MTDGGADYCFECVGLA------------SLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~~------------~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      . +.++|+||+|.+..            .....+++.+... -+++|.++..
T Consensus       133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            1 11699999988632            1122344444432 1478887754

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.25  E-value=0.72  Score=35.54  Aligned_cols=91  Identities=22%  Similarity=0.343  Sum_probs=48.3

Q ss_pred             EEEEEcc-CHHHHHHHHHHHH-cCCCEEEEE-cCChhH---HHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          155 TVVIFGL-GSIGLAVAEGARL-CGATRIIGV-DVISEK---FEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~-~G~~~Vi~~-~~~~~~---~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      +|+|+|+ |-+|+..++.+.. .+. ++++. ++++..   .+...-.|.  ..+..+     .++    .+.... +|+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l----~~~~~~-~DV   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDL----EELLEE-ADV   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-H----HHHTTH--SE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----hhH----HHhccc-CCE
Confidence            5899998 9999999999988 577 54444 443311   111111111  111111     122    222222 899


Q ss_pred             EEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +||++. +......++.+... |.-+.+|.+.
T Consensus        71 vIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG  100 (124)
T PF01113_consen   71 VIDFTN-PDAVYDNLEYALKH-GVPLVIGTTG  100 (124)
T ss_dssp             EEEES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred             EEEcCC-hHHhHHHHHHHHhC-CCCEEEECCC
Confidence            999994 44455555555554 7777787653

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.25  E-value=0.19  Score=43.53  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=46.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-Chh-HHHHH---HhcCCceE---EeCCCCCCccHHHHHHHhc--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISE-KFEIG---KRFGVTEF---VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~-~~~~~---~~~ga~~v---i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+.+.. +.. ..+.+   +..+....   .|..+  .+++.+.+.+..  .
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   79 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            567899987 9999999999999999 7777543 222 22222   33343322   23333  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|+++++.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            479999999875

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.23  E-value=0.56  Score=42.84  Aligned_cols=86  Identities=27%  Similarity=0.194  Sum_probs=57.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|. +|++.+++++.....        +...    .++.+.+.     ..|+|+-+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~--------~~~~----~~l~ell~-----~aDiVil~l  206 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF--------LTYK----DSVKEAIK-----DADIISLHV  206 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh--------hhcc----CCHHHHHh-----cCCEEEEeC
Confidence            46789999999999999999999999 999999876543210        0011    12322222     368888877


Q ss_pred             CCHH-----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS-----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~-----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...     .....+..++++ ..+|.++.
T Consensus       207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR  235 (330)
T PRK12480        207 PANKESYHLFDKAMFDHVKKG-AILVNAAR  235 (330)
T ss_pred             CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence            7542     133555677776 66666653

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.20  E-value=0.2  Score=44.36  Aligned_cols=131  Identities=17%  Similarity=0.147  Sum_probs=85.2

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCC--------CCccHHHHHHHhc
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--------GDKSVSQIIIDMT  220 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~--------~~~~~~~~l~~~~  220 (339)
                      +-.++.++|+.|.|..|++++..++..|+ -|...+..+.+.+..+.+|+...--.++.        -++++.++-.++.
T Consensus       160 gtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~  238 (356)
T COG3288         160 GTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV  238 (356)
T ss_pred             ccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence            34466789999999999999999999999 78887777777777777775432111110        0122333222222


Q ss_pred             -C--CCccEEEEcC--CC----HHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHHhhcCCeEEeee
Q 019535          221 -D--GGADYCFECV--GL----ASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSL  281 (339)
Q Consensus       221 -~--g~~d~v~d~~--g~----~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~i~~~~  281 (339)
                       .  .++|+||-+.  ++    ....+.+.+.+.++ ..+|++....++..- ..+-.....+++++.|..
T Consensus       239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence             2  2799999865  22    23367899999998 999999876655422 222222334568888764

>PRK05855 short chain dehydrogenase; Validated

Probab=94.20  E-value=0.26  Score=48.44  Aligned_cols=79  Identities=20%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    ..|.. .+  .|..+  .+.+.+.+.+..  .
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            3578999987 9999999998889999 8999999877665432    23432 22  33333  223333333322  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +.+|++|+++|.
T Consensus       391 g~id~lv~~Ag~  402 (582)
T PRK05855        391 GVPDIVVNNAGI  402 (582)
T ss_pred             CCCcEEEECCcc
Confidence            379999998875

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.14  E-value=0.54  Score=42.75  Aligned_cols=94  Identities=18%  Similarity=0.308  Sum_probs=60.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC----CCEEEEEcC--ChhHHHHHHhcCC--------------------c--eEEeCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG----ATRIIGVDV--ISEKFEIGKRFGV--------------------T--EFVNSKN  206 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G----~~~Vi~~~~--~~~~~~~~~~~ga--------------------~--~vi~~~~  206 (339)
                      +|.|.|.|.+|+..++.+...+    . +|+.+..  +++...++.+++.                    .  .++..++
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999887653    5 6666653  2333344433221                    0  1121111


Q ss_pred             CCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          207 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                           . +.+ .+...++|+||+|+|.....+.+...+..+ .+.|+++.+
T Consensus        80 -----p-~~~-~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP  122 (325)
T TIGR01532        80 -----P-EAL-PWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP  122 (325)
T ss_pred             -----h-hhc-cccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence                 1 111 122228999999999988788888899986 888888764

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=94.13  E-value=0.23  Score=45.08  Aligned_cols=96  Identities=22%  Similarity=0.257  Sum_probs=59.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----CceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .++.+||-+|+|. |..+..+++ .|+ +|++++.+++..+.++...    ...-+.+..   .+. +.+. ...+.||+
T Consensus       130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~---~da-e~l~-~~~~~FD~  201 (322)
T PLN02396        130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC---TTA-EKLA-DEGRKFDA  201 (322)
T ss_pred             CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe---cCH-HHhh-hccCCCCE
Confidence            4677899998863 555556654 588 9999999999988886421    100111111   121 1111 12237999


Q ss_pred             EEEc-----CC-CHHHHHHHHHHhhcCCcEEEEec
Q 019535          227 CFEC-----VG-LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~d~-----~g-~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+..     +. -...++.+.++|+++ |.+++.-
T Consensus       202 Vi~~~vLeHv~d~~~~L~~l~r~LkPG-G~liist  235 (322)
T PLN02396        202 VLSLEVIEHVANPAEFCKSLSALTIPN-GATVLST  235 (322)
T ss_pred             EEEhhHHHhcCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            9842     22 244588999999997 9887764

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.12  E-value=0.69  Score=41.64  Aligned_cols=43  Identities=30%  Similarity=0.578  Sum_probs=36.6

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  198 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga  198 (339)
                      +|.++|.|.+|...++-+...|. +|++.++++++.+.+++.|+
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~   44 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI   44 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence            57889999999988888888898 89999999888887777664

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.10  E-value=0.69  Score=42.84  Aligned_cols=94  Identities=22%  Similarity=0.251  Sum_probs=61.7

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEc--CChhH-HHHHHhcCCceEEeCCCCCCccHHH-------------
Q 019535          154 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEK-FEIGKRFGVTEFVNSKNCGDKSVSQ-------------  214 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~--~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~-------------  214 (339)
                      ++|.|+|+ |.+|..++...+..  .+ +|++++  ++.++ .+.+++++...+.-.++    ...+             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v   76 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV   76 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence            47899995 99999999988765  56 777775  33333 34456677766554433    2122             


Q ss_pred             -----HHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          215 -----IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       215 -----~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                           .+.++... .+|+|+.++++...+.-.+.++..+  +-|.+
T Consensus        77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL  120 (385)
T PRK05447         77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL  120 (385)
T ss_pred             EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence                 22233333 6899999998876678888888874  44555

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.10  E-value=0.058  Score=38.80  Aligned_cols=86  Identities=23%  Similarity=0.373  Sum_probs=54.1

Q ss_pred             EEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce---EEeCCCCCCccHHHHHHHhcCCCccEEEEcCC-
Q 019535          157 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMTDGGADYCFECVG-  232 (339)
Q Consensus       157 LI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g-  232 (339)
                      |-+|+| .|..+..+++.-+. ++++++.+++..+.+++.....   +...+.   .++     ...++.+|+|+.... 
T Consensus         1 LdiG~G-~G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v~~~~~~   70 (95)
T PF08241_consen    1 LDIGCG-TGRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA---EDL-----PFPDNSFDVVFSNSVL   70 (95)
T ss_dssp             EEET-T-TSHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT---TSS-----SS-TT-EEEEEEESHG
T ss_pred             CEecCc-CCHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH---HhC-----ccccccccccccccce
Confidence            345766 58888888888455 9999999999888887744221   222222   111     222237999985332 


Q ss_pred             -----CHHHHHHHHHHhhcCCcEEEE
Q 019535          233 -----LASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       233 -----~~~~~~~~~~~l~~~~G~~v~  253 (339)
                           -...++++.+.|+++ |+++.
T Consensus        71 ~~~~~~~~~l~e~~rvLk~g-G~l~~   95 (95)
T PF08241_consen   71 HHLEDPEAALREIYRVLKPG-GRLVI   95 (95)
T ss_dssp             GGSSHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             eeccCHHHHHHHHHHHcCcC-eEEeC
Confidence                 234588999999997 98864

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=94.10  E-value=0.51  Score=45.04  Aligned_cols=102  Identities=18%  Similarity=0.296  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ....++++++||-+|+|+ |..++.+++.. +..+|++++.++++.+.+++    +|...+ ....   .+..+....+ 
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~---~D~~~~~~~~-  317 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKA---LDARKVHEKF-  317 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEe---CCcccccchh-
Confidence            455678889999998754 55555666655 22389999999988777643    565432 1111   1221111111 


Q ss_pred             CCCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 019535          221 DGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       221 ~g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .+.||.|+ |  |+|.                         ...++.+++.|+++ |+++..
T Consensus       318 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvys  378 (444)
T PRK14902        318 AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYS  378 (444)
T ss_pred             cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            13699997 4  4432                         12477888999997 998754

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=94.08  E-value=1.5  Score=41.73  Aligned_cols=102  Identities=19%  Similarity=0.284  Sum_probs=64.8

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~~  218 (339)
                      ...+++++++||-.|+|+ |.-++.++..++ ..+|++++.++++.+.+++    +|...  ++..+.   ..    +..
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~----l~~  302 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ER----LTE  302 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hh----hhh
Confidence            345788999999998764 555666666652 2289999999999887753    56543  222221   11    111


Q ss_pred             hcCCCccEEE-E--cCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          219 MTDGGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       219 ~~~g~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ...+.||.|+ |  |+|..                         ..+..+++.++++ |.++..-.
T Consensus       303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  367 (431)
T PRK14903        303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC  367 (431)
T ss_pred             hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            2233799998 3  54431                         2366788999997 98766543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.07  E-value=0.34  Score=46.29  Aligned_cols=70  Identities=26%  Similarity=0.357  Sum_probs=47.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh-hHH----HHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~----~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+.+|+|+|+|.+|+.+++.+...|+ +|++++.+. +..    +.+++.|.. ++..+.   .+   ..    .+++|+
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~---~~----~~~~d~   71 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---PE---EF----LEGVDL   71 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---ch---hH----hhcCCE
Confidence            36789999998899999999999999 899998764 222    333445654 322222   11   11    126899


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      |+.+.|.
T Consensus        72 vv~~~g~   78 (450)
T PRK14106         72 VVVSPGV   78 (450)
T ss_pred             EEECCCC
Confidence            9998875

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.07  E-value=1.8  Score=32.69  Aligned_cols=88  Identities=19%  Similarity=0.261  Sum_probs=59.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHc--CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGLGSIGLAVAEGARLC--GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|+|+|.|.+|.....-++..  +. +++ +.++++++.+. .+++|.. .+       .++.+.+..   ..+|+|+-+
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~---~~~D~V~I~   69 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD---EDVDAVIIA   69 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH---TTESEEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh---hcCCEEEEe
Confidence            588999999998887666555  45 555 44556655555 4567776 33       233333332   269999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++...-.+.+..++..  |.-+++.-
T Consensus        70 tp~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   70 TPPSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             SSGGGHHHHHHHHHHT--TSEEEEES
T ss_pred             cCCcchHHHHHHHHHc--CCEEEEEc
Confidence            9988867778888877  46677754

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>TIGR02415 23BDH acetoin reductases

Probab=94.06  E-value=0.59  Score=40.53  Aligned_cols=77  Identities=19%  Similarity=0.190  Sum_probs=48.3

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      .+++|.|+ |.+|...++.+...|+ +|+.+.+++++.+.+    +..+.. ..  .|..+  .+.+.+.+.+..  .+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence            36899987 9999999999889999 899998876554333    223422 12  23332  122223333322  136


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|++.|.
T Consensus        78 id~vi~~ag~   87 (254)
T TIGR02415        78 FDVMVNNAGV   87 (254)
T ss_pred             CCEEEECCCc
Confidence            8999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-83
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-79
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		1e-64
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-64
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-64
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-63
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-62
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-60
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-60
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-59
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		1e-59
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-59
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-59
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-59
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-59
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		4e-59
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		4e-59
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		5e-59
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		5e-59
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		9e-59
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		1e-58
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		4e-57
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-57
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		7e-57
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		7e-57
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		3e-56
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-55
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-55
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		4e-55
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		4e-54
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		6e-49
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		4e-26
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		7e-12
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		4e-11
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		4e-11
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		7e-11
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-10
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-10
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		7e-10
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-09
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		2e-09
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		3e-09
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		3e-09
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-08
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		1e-08
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-08
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		6e-08
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-07
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-07
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-07
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		2e-07
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		5e-07
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		5e-06
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-05
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		2e-05
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		2e-05
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-05
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		3e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		4e-05
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		5e-05
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		7e-05
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		8e-05
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		5e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  305 bits (782), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 215/322 (66%), Gaps = 10/322 (3%)
Query: 18  RAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLC----SA 73
             +FP ILGHEA                    IP + A+C EC  C+S K NLC    SA
Sbjct: 59  EGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSA 118
Query: 74  FPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
               I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL
Sbjct: 119 TGVGI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLL 174
Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            CGV TG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+K+E  
Sbjct: 175 GCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA 234
Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           K+FGV EFVN K+  DK + ++I+D+TDGG DY FEC+G  S+++ A  CC KGWG +++
Sbjct: 235 KKFGVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 293
Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           +GV   G ++S   F+++ +G++  G+ FGG K+++ +P L+++YM+KE+++D+++TH +
Sbjct: 294 VGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNL 352
Query: 314 KFEEINSAFDLLIKGKCLRCVI 335
              EIN AFDLL +G CLRCV+
Sbjct: 353 TLGEINKAFDLLHEGTCLRCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 206/321 (64%), Gaps = 4/321 (1%)
Query: 18  RAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 77
             +FP +LGHEA                    IP + A+C EC  C+S K NLC      
Sbjct: 77  EGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 136
Query: 78  ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DP  P  + CLL CG
Sbjct: 137 TGVGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           V TG+GA W TA VE GS V +FGLG++GLAVAEGA+  GA+RIIG+D+ S+KF+  K F
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNF 255
Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           GVTEF+N K   ++ + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 256 GVTEFINPKE-HEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 314
Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
              G ++S   F+++ +G++  G+ FGG K++S +P L+ +Y+ KE+++D+++TH M   
Sbjct: 315 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA 373
Query: 317 EINSAFDLLIKGKCLRCVIWM 337
           +IN AFDL+  G CLR V+ M
Sbjct: 374 DINKAFDLMHDGDCLRVVLDM 394

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGHE                     IP ++  C EC  C + K NLC         
Sbjct: 60  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 119
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 120 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 178
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE
Sbjct: 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G
Sbjct: 239 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 297
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            +++   F+++ +G+   G+ FGG K+   +P L+  YM K++++D+FVTH + F+EIN 
Sbjct: 298 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 356
Query: 321 AFDLLIKGKCLRCVI 335
           AF+L+  GK +R V+
Sbjct: 357 AFELMHSGKSIRTVV 371

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGHE                     IP ++  C EC  C + K NLC         
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 121 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G
Sbjct: 240 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            +++   F+++ +G+   G+ FGG K+   +P L+  YM K++++D+FVTH + F+EIN 
Sbjct: 299 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 357
Query: 321 AFDLLIKGKCLRCVI 335
           AF+L+  GK +R V+
Sbjct: 358 AFELMHSGKSIRTVV 372

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  243 bits (619), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGHE                     IP ++  C EC  C + K NLC         
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 121 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G
Sbjct: 240 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            +++   F+++ +G+   G+ FGG K+   +P L+  YM K++++D+FVTH + F+EIN 
Sbjct: 299 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 357
Query: 321 AFDLLIKGKCLRCVI 335
           AF+L+  GK +R V+
Sbjct: 358 AFELMHSGKSIRTVV 372

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 189/315 (60%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGH                      IP ++  C EC  C + K NLC         
Sbjct: 60  FPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 119
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 120 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 178
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE
Sbjct: 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G
Sbjct: 239 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 297
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            +++   F+++ +G+   G+ FGG K+   +P L+  YM K++++D+FVTH + F+EIN 
Sbjct: 298 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 356
Query: 321 AFDLLIKGKCLRCVI 335
           AF+L+  GK +R V+
Sbjct: 357 AFELMHSGKSIRTVV 371

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  235 bits (600), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 183/315 (58%), Gaps = 4/315 (1%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP +LGHE                     IP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+  +KFE  K FG T+
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
           FVN  N   + +SQ++  MT+GG D+  ECVG   +++ A   C KGWG ++++G     
Sbjct: 241 FVNP-NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL- 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             ++    +++ +G+   GS+FGG K K  +P ++K Y+DK+++LD+F+TH M  E +N 
Sbjct: 299 HDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVND 357
Query: 321 AFDLLIKGKCLRCVI 335
           A DL+  GKC+R V+
Sbjct: 358 AIDLMKHGKCIRTVL 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 182/321 (56%), Gaps = 12/321 (3%)
Query: 19  AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A  P I GHEA                    IP F+  C +C  C+  +GNLC       
Sbjct: 59  APLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK----- 113
Query: 79  SPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 134
           +  MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ 
Sbjct: 114 NLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVG 172
Query: 135 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
           CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K
Sbjct: 173 CGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 232
Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
             G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++
Sbjct: 233 EVGATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIV 291
Query: 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 314
           GV      LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + 
Sbjct: 292 GVPPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLP 350
Query: 315 FEEINSAFDLLIKGKCLRCVI 335
           FE+IN  FDLL  GK +R ++
Sbjct: 351 FEKINEGFDLLRSGKSIRTIL 371

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 182/321 (56%), Gaps = 12/321 (3%)
Query: 19  AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A  P I GHEA                    IP F+  C +C  C+  +GNLC       
Sbjct: 59  APLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK----- 113
Query: 79  SPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 134
           +  MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ 
Sbjct: 114 NLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVG 172
Query: 135 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
           CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K
Sbjct: 173 CGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 232
Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
             G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++
Sbjct: 233 EVGATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIV 291
Query: 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 314
           GV      LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + 
Sbjct: 292 GVPPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLP 350
Query: 315 FEEINSAFDLLIKGKCLRCVI 335
           FE+IN  FDLL  GK +R ++
Sbjct: 351 FEKINEGFDLLRSGKSIRTIL 371

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G +++ GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  ++F   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G +++ GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G +FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG  GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++ V    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  224 bits (572), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 182/315 (57%), Gaps = 4/315 (1%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D+  +KFE     G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            ++ K+   K +S+++ +MT     Y FE +G    + +A A C   +G ++V+GV    
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             L+     +L +G+   G +FGGLK++ D+P L+  ++ K+ +LD+ +TH + F++I+ 
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISE 356
Query: 321 AFDLLIKGKCLRCVI 335
            F+LL  G+ +R V+
Sbjct: 357 GFELLNSGQSIRTVL 371

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  224 bits (571), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 182/315 (57%), Gaps = 4/315 (1%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D+  +KFE     G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            ++ K+   K +S+++ +MT     Y FE +G    + +A A C   +G ++V+GV    
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             L+     +L +G+   G +FGGLK++ D+P L+  ++ K+ +LD+ +TH + F++I+ 
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISE 356
Query: 321 AFDLLIKGKCLRCVI 335
            F+LL  G+ +R V+
Sbjct: 357 GFELLNSGQSIRTVL 371

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  223 bits (569), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP     C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 176/315 (55%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG  GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  218 bits (555), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D T RF    G+ IHHFV VS+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G++FGG K+K  +P L+  +M K+  LD  +T+ + FE+IN 
Sbjct: 299 QNLSINPM-LLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +R V+
Sbjct: 358 GFDLLRSGKSIRTVL 372

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 170/315 (53%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 170/315 (53%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 170/315 (53%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 183/334 (54%), Gaps = 10/334 (2%)
Query: 6   PSNKTAGKPIQCRAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRS 65
           P++  A  P + +A+FP +LGHE                     IP F   C  C  C S
Sbjct: 47  PTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLS 105
Query: 66  KKGNLCSAF-PFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 121
              NLC     FK   I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +V
Sbjct: 106 PLTNLCGKLRNFKYPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARV 164
Query: 122 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 181
           D      R CL+ CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII
Sbjct: 165 DDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRII 224
Query: 182 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAY 241
            +D+  EKF   K  G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A 
Sbjct: 225 AIDINGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV 283
Query: 242 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 301
            C   GWG   V+G      ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K
Sbjct: 284 DCTVLGWGSCTVVGAKV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 340
Query: 302 ELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
           + +LD  VTH + FE IN A DL+ +GK +R ++
Sbjct: 341 KFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 169/315 (53%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +  V+
Sbjct: 358 GFDLLHSGKSICTVL 372

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  213 bits (542), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 177/322 (54%), Gaps = 9/322 (2%)
Query: 18  RAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PF 76
           +A+FP +LGHE                     IP F   C  C  C S   NLC     F
Sbjct: 58  KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNF 117
Query: 77  K---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
           K   I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+
Sbjct: 118 KYPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI 176
Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
            CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   
Sbjct: 177 GCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236
Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           K  G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C   GWG   V
Sbjct: 237 KALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295
Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           +G      ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K+ +LD  VTH +
Sbjct: 296 VGAKV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHAL 352
Query: 314 KFEEINSAFDLLIKGKCLRCVI 335
            FE IN A DL+ +GK +R ++
Sbjct: 353 PFESINDAIDLMKEGKSIRTIL 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  211 bits (538), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 170/315 (53%), Gaps = 3/315 (0%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHEA                    IP  +  C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQ 120
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   R + IHHF+ +S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTSRFT-CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L +G+   G++ GG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPM-LLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  GK +R ++
Sbjct: 358 GFDLLHSGKSIRTIL 372

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 7/319 (2%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP I+GHEA                    IP +   C +C  C S   NLC       SP
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 81  ----WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                +  D+TSRF   +G+ ++HF   S+FS+YTV+   ++ K+D      R CLL CG
Sbjct: 124 ASDQQLMEDKTSRFT-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCG 182
Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
            STG GAA   A V  GST  +FGLG +GL+   G +  GA+RIIG+D+ SEKF   K  
Sbjct: 183 FSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKAL 242
Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           G T+ +N ++   K + ++II++T GG D+  +C G +  ++ A  C   GWG    +GV
Sbjct: 243 GATDCLNPRDL-HKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 301
Query: 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 316
                 L++   E++  G+ + G+ FGG K+   IP L+  Y +K+  LD  VTH + F+
Sbjct: 302 AAGSKGLTVFPEELI-IGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFD 360
Query: 317 EINSAFDLLIKGKCLRCVI 335
           +I+ AFDL+ +GK +R ++
Sbjct: 361 KISEAFDLMNQGKSIRTIL 379

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  191 bits (484), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 167/315 (53%), Gaps = 5/315 (1%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGHEA+                   IP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATG 179
Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV    +KF      G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N K+  DK + ++I + T+GG DY  EC G    +  A      G G T+VLG+  P 
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP- 297
Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
           ++       +L +G+ L GS+FGG K + ++  L+  YM K++ ++  V+ ++  ++IN 
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINK 356
Query: 321 AFDLLIKGKCLRCVI 335
           AF+LL  G+ +R ++
Sbjct: 357 AFELLSSGQGVRSIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 128/280 (45%), Gaps = 6/280 (2%)
Query: 57  CTECVGCRSKKGNLCSAF-PFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 115
           C +C  C +     CS F     S        +     +G    HF + SSF+ Y +   
Sbjct: 94  CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE 153
Query: 116 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 175
            + VKV   VP      L CG+ TG GA      V   S+ V +G G++GL+    A++C
Sbjct: 154 NNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVC 213
Query: 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 235
           GA+ II VD++  + E+ K+ G T  +NSK    +     I ++TDGG ++  E  G   
Sbjct: 214 GASIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDGGVNFALESTGSPE 270
Query: 236 LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL 295
           ++++         GK  V+G  Q G+       ++L  GK ++G + G    K  IP L+
Sbjct: 271 ILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELV 329
Query: 296 KRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
           + Y   +   D+ V     F+EIN A     KG  L+ +I
Sbjct: 330 RLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPII 368

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 49/271 (18%)
Query: 57  CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 116
           C  C  C++ + NLC                   ++LR   IH       F+EY ++   
Sbjct: 111 CGRCPQCQAGRVNLC-------------------RNLRAIGIHRD---GGFAEYVLVPRK 148
Query: 117 HVVKVDPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 173
              ++  T+ P        L+C +          + ++ GSTV I G G IGL   + AR
Sbjct: 149 QAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTVAILGGGVIGLLTVQLAR 203
Query: 174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII---IDMTDGGADYCFEC 230
           L GAT +I     + K  + +  G T  V+  + GD  V + I   + +  GG D   EC
Sbjct: 204 LAGATTVILSTRQATKRRLAEEVGATATVD-PSAGD--VVEAIAGPVGLVPGGVDVVIEC 260
Query: 231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD 290
            G+A  V+++    + G G  ++LGV   G ++ +  F++L     ++GS          
Sbjct: 261 AGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFIN------- 312
Query: 291 IPILLKRYMD----KELELDKFVTHEMKFEE 317
            P + +R  D      +E+D+ ++  +  +E
Sbjct: 313 -PFVHRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 89  RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 148
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 208
           ++E+G+TV + G+G +GL    GA+L GA RII V       +  K +G T+ VN K   
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 209 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 267
           D  +   I+++T+G G D      G A ++  A    + G G    +     G  L +  
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLDVPR 278
Query: 268 FE----VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 322
            E    + H  K + G L  G + + +  I L  Y  K ++  K VTH  + F+ I  AF
Sbjct: 279 LEWGCGMAH--KTIKGGLCPGGRLRMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAF 334
Query: 323 DLL 325
            L+
Sbjct: 335 MLM 337

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 89  RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 148
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 208
           ++E+G+TV + G+G +GL    GA+L GA RII V       +  K +G T+ VN K   
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 209 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 267
           D  +   I+++T+G G D      G A ++  A    + G G    +     G  L +  
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLPVPR 278
Query: 268 FE----VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 322
            E    + H  K + G L  G + + +  I L  Y  K ++  K VTH  + F+ I  AF
Sbjct: 279 LEWGCGMAH--KTIKGGLCPGGRLRMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAF 334
Query: 323 DLL 325
            L+
Sbjct: 335 MLM 337

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 113 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 172
           +++AH+ K    +P   A ++   ++TG   A   A++E+GS+VV+ G+G++GL    GA
Sbjct: 131 MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGA 186
Query: 173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 231
           +L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G D      
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVIMAG 243
Query: 232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL----HSGKILMGSLFGGLKA 287
           G +  + +A    + G    I+  ++  GS  +L    V      + K + G L  G + 
Sbjct: 244 GGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 288 KSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLL 325
           + +  I L  Y  K ++  K VTH  + F+ I  AF L+
Sbjct: 301 RMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAFMLM 337

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 113 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 172
           +++AH+ K    +P   A ++   ++TG   A   A++++GS+VV+ G+G++GL    GA
Sbjct: 131 MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGA 186
Query: 173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 231
           +L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G D      
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVIMAG 243
Query: 232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL----HSGKILMGSLFGGLKA 287
           G +  + +A +  + G    I+  ++  GS  +L    V      + K + G L  G + 
Sbjct: 244 GGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 288 KSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLL 325
           + +  I L  Y  K ++  K VTH  + F+ I  AF L+
Sbjct: 301 RMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAFMLM 337

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 57  CTECVGCR-SKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 115
           C EC  C+ SK+  LC   P +    + R   S +  LRG           +S + VLD 
Sbjct: 112 CGECYWCKVSKEPYLC---PNRKVYGINRG-CSEYPHLRG----------CYSSHIVLDP 157
Query: 116 -AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 174
              V+KV      +   +  C  +T   A         G TVVI G G +GL     AR 
Sbjct: 158 ETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARS 217
Query: 175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL 233
            GA  +I +     + ++ +  G    +N +    +   + I+D+T G GAD+  E  G 
Sbjct: 218 LGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGD 277
Query: 234 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPI 293
           +  + E     R+G G   V GV  P   +    +E L    +L  + F G+   SD   
Sbjct: 278 SRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWL----VLKNATFKGIWV-SDTSH 331
Query: 294 LLKRY----MDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336
            +K       + +L L K +TH +  +E N A +L+   + L+ +++
Sbjct: 332 FVKTVSITSRNYQL-LSKLITHRLPLKEANKALELMESREALKVILY 377

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 18/231 (7%)
Query: 107 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 164
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++E+G+TV + G+G +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPV 178
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL    GA+L GA RII V       +  K +G T+ VN K   D  +   I+++T+G G
Sbjct: 179 GLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK---DGPIESQIMNLTEGKG 235
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE----VLHSGKILMG 279
            D      G A ++  A    + G G    +     G  L +   E    + H  K + G
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLPVPRLEWGCGMAH--KTIKG 292
Query: 280 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
            L  G + +++  +L    +   ++L K VTH    F+ I  A  LL+K K
Sbjct: 293 GLCPGGRLRAE--MLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 107 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 164
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++++GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL    GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKG 235
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL----HSGKILMG 279
            D      G +  + +A +  + G    I+  ++  GS  +L    V      + K + G
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 292
Query: 280 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
            L  G + +++  +L    +   ++L K VTH    F+ I  A  LL+K K
Sbjct: 293 GLCPGGRLRAE--MLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 107 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 164
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++++GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL    GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKG 235
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL----HSGKILMG 279
            D      G +  + +A +  + G    I+  ++  GS  +L    V      + K + G
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 292
Query: 280 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
            L  G + +++  +L    +   ++L K VTH    F+ I  A  LL+K K
Sbjct: 293 GLCPGGRLRAE--MLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 107 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 164
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++E+GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL    GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIEDQVMKLTNGKG 235
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL----HSGKILMG 279
            D      G +  + +A    + G    I+  ++  GS  +L    V      + K + G
Sbjct: 236 VDRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 292
Query: 280 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
            L  G + +++   L    +   ++L K VTH    F+ I  A  LL+K K
Sbjct: 293 GLCPGGRLRAE--RLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
           F+EY V D   V  +   +  N  A +L  GV+  V    +  + + G  VVI G+G +G
Sbjct: 145 FAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--VYKGLKVTDTKPGDWVVISGIGGLG 202
Query: 166 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 225
               + AR  G   +  VD+   K ++ +R G T  VN+K   D +    I   TDGGA 
Sbjct: 203 HMAVQYARAMG-LNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAA--YIRKETDGGAQ 259
Query: 226 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 285
                       ++A     +  G T+ L    PG    LS F ++ +G  + GS+ G  
Sbjct: 260 GVLVTAVSPKAFEQALGMVAR--GGTVSLNGLPPGD-FPLSIFNMVLNGVTVRGSIVG-- 314
Query: 286 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
             + D+   L    D ++   K      K E+IN+ FD + +G 
Sbjct: 315 -TRLDLQESLDFAADGKV---KATIQTGKLEDINAIFDDMRQGN 354

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 113 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 172
           +++AH+ K    +P   A ++   ++TG   A   AN+++G TV + G+G +GL    GA
Sbjct: 131 MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGA 186
Query: 173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 231
              GA RI  V       +I   +G T+ +N KN GD  + + I+  TDG G D      
Sbjct: 187 NHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQILKATDGKGVDKVVIAG 243
Query: 232 GLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 289
           G      +A    + G   G    LG +     +  S + V    K + G L  G + + 
Sbjct: 244 GDVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRM 302
Query: 290 DIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
           +  I L  Y  K ++  K VTH  + F+ I  AF +L+K K
Sbjct: 303 ERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAF-MLMKDK 340

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Query: 105 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 157
           S+F +    ++ HV + D         + P  A +LS  V+TG   A   AN+++G TV 
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 158 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 217
           + G+G +GL    GA   GA RI  V       +I   +G T+ +N KN GD  + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 218 DMTDG-GADYCFECVGLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSLSSFEVLHSG 274
             TDG G D      G      +A    + G   G    LG +     +  S + V    
Sbjct: 229 KATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIDIPRSEWGVGMGH 287
Query: 275 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
           K + G L  G + +  +  L       +L+  K +TH  +  E++  A  +L+K K
Sbjct: 288 KHIHGGLTPGGRVR--MEKLASLISTGKLDTSKLITHRFEGLEKVEDAL-MLMKNK 340

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Query: 105 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 157
           S+F +    ++ HV + D         + P  A +LS  V+TG   A   AN+++G TV 
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 158 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 217
           + G+G +GL    GA   GA RI  V       +I   +G T+ +N KN GD  + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 218 DMTDG-GADYCFECVGLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSLSSFEVLHSG 274
             TDG G D      G      +A    + G   G    LG +     +  S + V    
Sbjct: 229 KATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIPIPRSEWGVGMGH 287
Query: 275 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 329
           K + G L  G + +  +  L       +L+  K +TH  +  E++  A  +L+K K
Sbjct: 288 KHIHGGLTPGGRVR--MEKLASLISTGKLDTSKLITHRFEGLEKVEDAL-MLMKNK 340

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
           ++EY      +VVK+   +    A  + C GV+T    A +    + G  V I+G+G +G
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGLG 177
Query: 166 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCGDKSVSQIIIDMTDGGA 224
               + A+  G   ++ VD+  EK E+ K  G    VN  K    K + + +     GG 
Sbjct: 178 HVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-----GGV 231
Query: 225 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 284
                        Q AY   R+G G  +++G+  P  ++ +  F+ + +G  ++GS+ G 
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMPIPIFDTVLNGIKIIGSIVG- 287
Query: 285 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
              + D+   L+   + ++   K +      E+IN  FD ++KG+
Sbjct: 288 --TRKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQ 327

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 19/225 (8%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
           ++EY      +VVK+   +    A  + C GV+T    A +    + G  V I+G+G  G
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGFG 177
Query: 166 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCGDKSVSQIIIDMTDGGA 224
               + A+  G   ++ VD+  EK E+ K  G    VN  K    K + + +     GG 
Sbjct: 178 HVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-----GGV 231
Query: 225 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 284
                        Q AY   R+G G  +++G+  P  ++ +  F+ + +G  ++GS+ G 
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMPIPIFDTVLNGIKIIGSIVG- 287
Query: 285 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
              + D+   L+   + ++   K +      E+IN  FD ++KG+
Sbjct: 288 --TRKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQ 327

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
            +E  ++   + VKV   + P  A  ++C GV+T    A + + V+ G   VIFG G +G
Sbjct: 119 MAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 166 -LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
            LA+     + GA ++I VD+  +K  + K+ G    +NS   GD +    I  +T G G
Sbjct: 177 NLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGADVTINS---GDVNPVDEIKKITGGLG 232
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 283
                 C  +A +  E      K  GK + + V  P ++++LS   V+  G  + GSL G
Sbjct: 233 VQSAIVC-AVARIAFEQAVASLKPMGKMVAVAV--PNTEMTLSVPTVVFDGVEVAGSLVG 289
Query: 284 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
               + D+    +   + ++   K +    K EEIN   D +  GK
Sbjct: 290 ---TRLDLAEAFQFGAEGKV---KPIVATRKLEEINDIIDEMKAGK 329

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
            +E  ++   + VKV   + P  A  ++C GV+T    A + + V+ G   VIFG G +G
Sbjct: 119 MAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 166 -LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
            LA+     + GA ++I VD+  +K  + K+ G    +NS   GD +    I  +T G G
Sbjct: 177 NLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGADVIINS---GDVNPVDEIKKITGGLG 232
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 283
                 C  +A +  E      K  GK + + +  P ++++LS   V+  G  + GSL G
Sbjct: 233 VQSAIVC-AVARIAFEQAVASLKPMGKMVAVAL--PNTEMTLSVPTVVFDGVEVAGSLVG 289
Query: 284 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
               + D+    +   + ++   K +    K EEIN   D +  GK
Sbjct: 290 ---TRLDLAEAFQFGAEGKV---KPIVATRKLEEINDIIDEMKAGK 329

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 203
           A R A V +G+ V++ G G IGL     A+  GA +++  D+ + +    K  G    + 
Sbjct: 162 ACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILE 221
Query: 204 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 263
             N   + +++ +  +     +   EC G+ + +Q        G G  +++G+   GS+ 
Sbjct: 222 ISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSG-GTLVLVGL---GSE- 276
Query: 264 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 323
            ++S  ++H+    +  + G  +  +  P+ +     K + +   VTH    E+   AF+
Sbjct: 277 -MTSVPLVHAATREV-DIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPLEKALEAFE 334
Query: 324 LLIKGKCLRCVI 335
              KG  L+ +I
Sbjct: 335 TSKKGLGLKVMI 346

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 107/269 (39%), Gaps = 33/269 (12%)
Query: 57  CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 116
           C  C  C+  K NLC    F  +P  P D         G    ++V  + F         
Sbjct: 96  CRRCQFCKEGKYNLCPDLTFCATP--PDD---------GNLARYYVHAADFCH------- 137
Query: 117 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176
              K+   V      LL   +S GV A  R A V++G+TV++ G G IGL     A+  G
Sbjct: 138 ---KLPDNVSLEEGALLE-PLSVGVHACRR-AGVQLGTTVLVIGAGPIGLVSVLAAKAYG 192
Query: 177 ATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234
           A  ++       + E+ K  G  VT  V+     + S+ + I        +   +C G  
Sbjct: 193 AF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNE 251
Query: 235 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPIL 294
             +       R G G  +++G+   GSQ+         + +I + S+F   +  +D PI 
Sbjct: 252 KCITIGINITRTG-GTLMLVGM---GSQMVTVPLVNACAREIDIKSVF---RYCNDYPIA 304
Query: 295 LKRYMDKELELDKFVTHEMKFEEINSAFD 323
           L+        + + VTH  K E+   AF+
Sbjct: 305 LEMVASGRCNVKQLVTHSFKLEQTVDAFE 333

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Query: 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 203
           A R   V +G  V++ G G IG+     A+  GA +++  D+ + +    K  G    + 
Sbjct: 163 ACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ 222
Query: 204 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 263
                 + +++ +        +   EC G  + +Q      R G G  +++G+   GS+ 
Sbjct: 223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSE- 277
Query: 264 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 323
            +++  +LH+  I    + G  +  +  P+ +     K + +   VTH    E+   AF+
Sbjct: 278 -MTTVPLLHAA-IREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFE 335
Query: 324 LLIKGKCLRCVI 335
              KG  L+ ++
Sbjct: 336 TFKKGLGLKIML 347

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 107 FSEYTVLDIAHVVKVDPTVP-PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 165
           ++EY + D  +V  +   V     A +L  GV+   G   +  N   G  V I G+G +G
Sbjct: 126 YAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKG--LKQTNARPGQWVAISGIGGLG 183
Query: 166 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 225
               + AR  G   +  +D+   K E+ ++ G +  VN++   +  V  I  D+  GGA 
Sbjct: 184 HVAVQYARAMG-LHVAAIDIDDAKLELARKLGASLTVNARQ--EDPVEAIQRDI--GGAH 238
Query: 226 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 285
                    S   +A    R+  G TI L V  P        F+V+  G  + GS+ G  
Sbjct: 239 GVLVTAVSNSAFGQAIGMARR--GGTIAL-VGLPPGDFPTPIFDVVLKGLHIAGSIVG-- 293
Query: 286 KAKSDIPILLKRYMDKELE-LDKFVTHEMKFEEINSAFDLLIKGK 329
             ++D    L+  +D   E L K   H  K ++IN   D +  G+
Sbjct: 294 -TRAD----LQEALDFAGEGLVKATIHPGKLDDINQILDQMRAGQ 333

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGLGSI 164
           F+EY V+   ++ K   ++PP  A L        +G A  T  A    G +V+I G G +
Sbjct: 124 FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVDTVLAGPISGKSVLITGAGPL 178
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL     A+  GA  +I  +    + E+ K+ G    +N     ++ V + + D+TDG G
Sbjct: 179 GLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNG 235
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 283
            D   E  G    +++         G+  +LG+  PG ++++  F  L   K L      
Sbjct: 236 VDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL-YPG-KVTI-DFNNLIIFKALTIYGIT 291
Query: 284 GLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGKCLRCV 334
           G         + +     +L LD  +TH+ K F++   AF+L   GK  + V
Sbjct: 292 GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVV 343

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGLGSI 164
           F+EY V+   ++ K   ++PP  A L        +G A  T  A    G +V+I G G +
Sbjct: 125 FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVDTVLAGPISGKSVLITGAGPL 179
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL     A+  GA  +I  +    + E+ K+ G    +N     ++ V + + D+TDG G
Sbjct: 180 GLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNG 236
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 283
            D   E  G    +++         G+  +LG+  PG ++++  F  L   K L      
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL-YPG-KVTI-DFNNLIIFKALTIYGIT 292
Query: 284 GLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGKCLRCV 334
           G         + +     +L LD  +TH+ K F++   AF+L   GK  + V
Sbjct: 293 GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVV 344

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 29/230 (12%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNR------ACLLSCGVSTGVGAAWRTANVEVGSTVVIFG 160
           + EY V D  +V      + P++      A +L  GV+  V    +  +   G  VVI G
Sbjct: 122 YGEYVVADPNYV-----GLLPDKVGFVEIAPILCAGVT--VYKGLKVTDTRPGQWVVISG 174
Query: 161 LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 220
           +G +G    + AR  G  R+  VD+   K  + +R G    VN+++    +  Q  I   
Sbjct: 175 IGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEI--- 230
Query: 221 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 280
            GGA              +A    R+  G TI L    PG       F+V+  G  + GS
Sbjct: 231 -GGAHGVLVTAVSPKAFSQAIGMVRR--GGTIALNGLPPGD-FGTPIFDVVLKGITIRGS 286
Query: 281 LFGGLKAKSDIPILLKRYMDKELELD-KFVTHEMKFEEINSAFDLLIKGK 329
           + G    +SD    L+  +D     D K      K +++N  F  L +GK
Sbjct: 287 IVG---TRSD----LQESLDFAAHGDVKATVSTAKLDDVNDVFGRLREGK 329

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 125/325 (38%), Gaps = 50/325 (15%)
Query: 21  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE +                   I H       C+ CR+ +   C    F   P
Sbjct: 73  LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---P 129
Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----ACLLSCG 136
            +  D                     F+E+       V+K+   +   +    A L   G
Sbjct: 130 GLNID-------------------GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAG 170
Query: 137 VST--GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
           ++    V  A RT  +  G+ V I G+G +G    +  ++     +I +DV  EK ++ +
Sbjct: 171 ITAYRAVKKAART--LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228
Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQ-EAYACCRKGWGKTI 252
           R G    V+++    K V    +++T G G +   + VG  + V    Y   R   G+ I
Sbjct: 229 RLGADHVVDARRDPVKQV----MELTRGRGVNVAMDFVGSQATVDYTPYLLGR--MGRLI 282
Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG-LKAKSDIPILLKRYMDKELELDKFVTH 311
           ++G    G +L   +  V+ S     GSL G  ++    + + L+  +  E+++      
Sbjct: 283 IVGY---GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVRVEVDIH----- 334
Query: 312 EMKFEEINSAFDLLIKGKCL-RCVI 335
             K +EIN   + L KG+ L R V+
Sbjct: 335 --KLDEINDVLERLEKGEVLGRAVL 357

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 7/189 (3%)
Query: 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 203
           A R   V +G  V++ G G IG      A+  GA +++  D+ + +    K  G    + 
Sbjct: 163 ACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQ 222
Query: 204 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 263
                 + +++ +        +   EC G  + +Q      R G G  +++G+   GS+ 
Sbjct: 223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSEX 278
Query: 264 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 323
           +  +  +LH+  I    + G  +  +  P+ +     K + +   VTH    E+   AF+
Sbjct: 279 T--TVPLLHAA-IREVDIKGVFRYCNTWPVAISXLASKSVNVKPLVTHRFPLEKALEAFE 335
Query: 324 LLIKGKCLR 332
              KG  L+
Sbjct: 336 TFKKGLGLK 344

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 84/232 (36%), Gaps = 36/232 (15%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 166
           F+EY V+   +V  +   +P      +   ++ G+ A       E    V+I G G+IGL
Sbjct: 117 FAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCE-NKNVIIIGAGTIGL 174
Query: 167 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 226
              + A   GA  +  +D+ SEK  + K FG  +  NS       +  ++ ++       
Sbjct: 175 LAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELR------ 228
Query: 227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 286
                    L+ E       G  +T+ L V+  G    L+    LH    L  + FG + 
Sbjct: 229 ------FNQLILET-----AGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKIL 277
Query: 287 AK-----------------SDIPILLKRYMDKELELDKFVTHEMKFEEINSA 321
            K                  +     +   +++L L+  + H   FE    A
Sbjct: 278 RKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQA 329

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 23/186 (12%)
Query: 57  CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 116
           C  C  C   + N C+                R  DL G T     S  S +EY ++D A
Sbjct: 92  CGACHACARGRENYCT----------------RAADL-GITPPGLGSPGSMAEYMIVDSA 134
Query: 117 -HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 175
            H+V +    P   A L   G++     +     +  GST V+ G+G +G    +  R  
Sbjct: 135 RHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAV 194
Query: 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA 234
            A R+I VD+  ++  + +  G    V S        +  I ++T G GA   F+ VG  
Sbjct: 195 SAARVIAVDLDDDRLALAREVGADAAVKSG----AGAADAIRELTGGQGATAVFDFVGAQ 250
Query: 235 SLVQEA 240
           S +  A
Sbjct: 251 STIDTA 256

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 130 ACLLSC-GVSTGVGAAWRTANVEVGSTVVIFG----LGSIGLAVAEGARLCGATRIIGVD 184
           A  L+C GV+T    A R A+++   T+V+ G    LG++ + +A+   + GAT IIGVD
Sbjct: 149 AAPLTCSGVTTY--RAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKA--VSGAT-IIGVD 203
Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 244
           V  E  E  KR G    +N+ +     VS+I       GAD   + +  +      Y   
Sbjct: 204 VREEALEAAKRAGADYVINASS--QDPVSEIRRITQGKGADAVID-LNNSEKTLSIYPYV 260
Query: 245 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE 304
               GK +++G+   G+ L   +  +  +    +GSL G    +SD   ++   + +  +
Sbjct: 261 LAKQGKYVMVGLF--GADLKYHAPLITLNEVQFIGSLVGN---QSDFLGIMS--LAEAGK 313
Query: 305 LDKFVTHEMKFEEINSAFDLL 325
           +   VT  MK EE N A D L
Sbjct: 314 VKPMVTKTMKLEEANEAIDNL 334

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 88/229 (38%), Gaps = 11/229 (4%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 166
            SEY VL     V    ++    A  L C   T   A     ++  G  VV+ G G + L
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVAL 203
Query: 167 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 226
              + A+  GA  I+      EK +     G    +N     +  V ++     D GAD+
Sbjct: 204 FGLQIAKATGAEVIV-TSSSREKLDRAFALGADHGIN--RLEEDWVERVYALTGDRGADH 260
Query: 227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 286
             E  G A L Q   A      G+  V+GV + G ++S     +L    ++ G   G  +
Sbjct: 261 ILEIAGGAGLGQSLKAVAPD--GRISVIGVLE-GFEVSGPVGPLLLKSPVVQGISVGHRR 317
Query: 287 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
           A  D+   + R     L L   +    KF E+  A   L +G   + VI
Sbjct: 318 ALEDLVGAVDR-----LGLKPVIDXRYKFTEVPEALAHLDRGPFGKVVI 361

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 22/237 (9%)
Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGLGSI 164
           F+ Y ++   +  K    +PP  A L        +G A  T  A    G + +I G G +
Sbjct: 125 FAHYAIVPAKNAWKNPKDMPPEYAAL-----QEPLGNAVDTVLAGPIAGRSTLITGAGPL 179
Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           GL     A+  GA  +I  +    + ++ K+ G    VN     ++   + ++D+TDG G
Sbjct: 180 GLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPF---EEDPVKFVMDITDGAG 236
Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS---FEVLHSGKILMGS 280
            +   E  G    +++       G G+  +LG+      +  ++   F+ L    I    
Sbjct: 237 VEVFLEFSGAPKALEQGLKAVTPG-GRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRH 295
Query: 281 LFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGKCLRCVIW 336
           L+      S +          +L LD  +TH+ K F++   AF+L+  GK  + V +
Sbjct: 296 LWETWYTVSSL------IQSGKLNLDPIITHKYKGFDKFEEAFELMRAGKTGKVVFF 346

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-164
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-160
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-159
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-156
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-155
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-130
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-110
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-61
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-54
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-50
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-49
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	3e-47
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-47
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	8e-47
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-45
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-45
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-44
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-42
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-42
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	3e-42
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-39
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	7e-39
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-36
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-36
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-29
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-28
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	3e-28
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-18
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-18
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-18
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	4e-18
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-14
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	5e-14
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-13
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	6e-13
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-12
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	6e-12
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-11
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-11
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-10
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-09
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-09
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-09
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-09
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	7e-09
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-07
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	6e-06
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-04
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-04
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-04
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	2e-04
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	4e-04
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	5e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  462 bits (1191), Expect = e-164
 Identities = 140/320 (43%), Positives = 203/320 (63%), Gaps = 3/320 (0%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
              FP ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC      
Sbjct: 57  EGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVT 116

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 137
               +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+
Sbjct: 117 QGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGI 175

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           STG GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG
Sbjct: 176 STGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG 235

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257
            TE +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV 
Sbjct: 236 ATECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA 294

Query: 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
             G +++   F+++ +G+   G+ FGG K+   +P L+  YM K++++D+FVTH + F+E
Sbjct: 295 ASGEEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 353

Query: 318 INSAFDLLIKGKCLRCVIWM 337
           IN AF+L+  GK +R V+ +
Sbjct: 354 INKAFELMHSGKSIRTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  452 bits (1165), Expect = e-160
 Identities = 129/315 (40%), Positives = 190/315 (60%), Gaps = 3/315 (0%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
             LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN 
Sbjct: 299 QNLSMNPMLLL-SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357

Query: 321 AFDLLIKGKCLRCVI 335
            FDLL  G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  449 bits (1157), Expect = e-159
 Identities = 134/319 (42%), Positives = 195/319 (61%), Gaps = 4/319 (1%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
             FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S K N C       
Sbjct: 60  DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANE 119

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           SP +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVS
Sbjct: 120 SPDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVS 178

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
           TG GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+  +KFE  K FG 
Sbjct: 179 TGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA 238

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
           T+FVN  +   + +SQ++  MT+GG D+  ECVG   +++ A   C KGWG ++++G   
Sbjct: 239 TDFVNPNDH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT- 296

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
               ++    +++ +G+   GS+FGG K K  +P ++K Y+DK+++LD+F+TH M  E +
Sbjct: 297 DLHDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESV 355

Query: 319 NSAFDLLIKGKCLRCVIWM 337
           N A DL+  GKC+R V+ +
Sbjct: 356 NDAIDLMKHGKCIRTVLSL 374

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  443 bits (1141), Expect = e-156
 Identities = 129/321 (40%), Positives = 185/321 (57%), Gaps = 9/321 (2%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
           A+FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC       
Sbjct: 59  ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFK 118

Query: 79  SPW----MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 134
            P     +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ 
Sbjct: 119 YPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIG 177

Query: 135 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
           CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   K
Sbjct: 178 CGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 237

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
             G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C   GWG   V+
Sbjct: 238 ALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 314
           G      ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K+ +LD  VTH + 
Sbjct: 297 GA--KVDEMTIPTVDVI-LGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP 353

Query: 315 FEEINSAFDLLIKGKCLRCVI 335
           FE IN A DL+ +GK +R ++
Sbjct: 354 FESINDAIDLMKEGKSIRTIL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  440 bits (1133), Expect = e-155
 Identities = 125/315 (39%), Positives = 180/315 (57%), Gaps = 5/315 (1%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATG 179

Query: 141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 200
            GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV    +KF      G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 260
            +N K+  DK + ++I + T+GG DY  EC G    +  A      G G T+VLG+  P 
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 298

Query: 261 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320
            +L L    +L +G+ L GS+FGG K + ++  L+  YM K++ ++  V+ ++  ++IN 
Sbjct: 299 ERLPLDPLLLL-TGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINK 356

Query: 321 AFDLLIKGKCLRCVI 335
           AF+LL  G+ +R ++
Sbjct: 357 AFELLSSGQGVRSIM 371

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  374 bits (964), Expect = e-130
 Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 7/319 (2%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P +LGHE  G++E++G NV  +  GD V+  +   C +C  C +     CS F  +   
Sbjct: 59  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFS 117

Query: 81  WMPRDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 139
               +               HF + SSF+ Y +    + VKV   VP      L CG+ T
Sbjct: 118 GADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQT 177

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
           G GA      V   S+ V +G G++GL+    A++CGA+ II VD++  + E+ K+ G T
Sbjct: 178 GAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT 237

Query: 200 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259
             +NSK    +     I ++TDGG ++  E  G   ++++         GK  V+G  Q 
Sbjct: 238 HVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQL 293

Query: 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319
           G+       ++L  GK ++G + G    K  IP L++ Y   +   D+ V     F+EIN
Sbjct: 294 GTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEIN 352

Query: 320 SAFDLLIKGKCLRCVIWMG 338
            A     KG  L+ +I + 
Sbjct: 353 QAAIDSRKGITLKPIIKIA 371

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  326 bits (837), Expect = e-110
 Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 27/329 (8%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDG-----VVEGDVVIPHFLADCTECVGCRSKKGNLCS 72
           R   P ILGHE  G V  V           +  GD+++ +    C EC  C+  K     
Sbjct: 68  RVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLC 127

Query: 73  AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRAC 131
                    + R   S +  LRG           +S + VLD    V+KV      +   
Sbjct: 128 PNRKVYG--INRG-CSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLA 174

Query: 132 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 191
           +  C  +T   A         G TVVI G G +GL     AR  GA  +I +     + +
Sbjct: 175 MAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLK 234

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 250
           + +  G    +N +    +   + I+D+T G GAD+  E  G +  + E     R+G G 
Sbjct: 235 LAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GF 293

Query: 251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS--DIPILLKRYMDKELELDKF 308
             V GV  P   +       ++   +L  + F G+           +         L K 
Sbjct: 294 YSVAGVAVPQDPVPFK----VYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKL 349

Query: 309 VTHEMKFEEINSAFDLLIKGKCLRCVIWM 337
           +TH +  +E N A +L+   + L+ +++ 
Sbjct: 350 ITHRLPLKEANKALELMESREALKVILYP 378

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  197 bits (504), Expect = 6e-61
 Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 33/318 (10%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE +G V  +GE V G   GD V  +    C  C  C   + N C+        
Sbjct: 56  LPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRA------ 109

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 139
                         G T     S  S +EY ++D A  +     + P  A  L+  G++ 
Sbjct: 110 -----------ADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTP 158

Query: 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
               +     +  GST V+ G+G +G    +  R   A R+I VD+  ++  + +  G  
Sbjct: 159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD 218

Query: 200 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
             V S        +  I ++T G GA   F+ VG  S +  A        G   V+G+  
Sbjct: 219 AAVKS----GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGI-- 271

Query: 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318
                +   F ++  G  ++   +G      ++  ++       L++    T     +E 
Sbjct: 272 HAGAHAKVGFFMIPFGASVVTPYWGTRS---ELMEVVALARAGRLDI---HTETFTLDEG 325

Query: 319 NSAFDLLIKGKCL-RCVI 335
            +A+  L +G    R V+
Sbjct: 326 PAAYRRLREGSIRGRGVV 343

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  181 bits (461), Expect = 2e-54
 Identities = 69/326 (21%), Positives = 124/326 (38%), Gaps = 45/326 (13%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFP 75
            +  P  LGHE  G+V   G  V  +  G      P+    C  C  C++ + NLC    
Sbjct: 72  PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLC---- 125

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL 132
                          ++LR       + +     F+EY ++      ++  T+ P     
Sbjct: 126 ---------------RNLR------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAF 164

Query: 133 ---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 189
              L+C +          + ++ GSTV I G G IGL   + ARL GAT +I     + K
Sbjct: 165 CEPLACCL-----HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATK 219

Query: 190 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 249
             + +  G T  V+             + +  GG D   EC G+A  V+++    + G G
Sbjct: 220 RRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-G 278

Query: 250 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV 309
             ++LGV   G ++ +  F++L     ++GS F                    +E+D+ +
Sbjct: 279 TVVILGVLPQGEKVEIEPFDILFRELRVLGS-FI---NPFVHRRAADLVATGAIEIDRMI 334

Query: 310 THEMKFEEINSAFDLLIKGKCLRCVI 335
           +  +  +E             ++ ++
Sbjct: 335 SRRISLDEAPDVISNPAAAGEVKVLV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  170 bits (433), Expect = 2e-50
 Identities = 68/321 (21%), Positives = 119/321 (37%), Gaps = 42/321 (13%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFP 75
              +P  LGHE  G +++VG  VD +  GD    +P     C  C  C     + C+ + 
Sbjct: 50  AHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAKYD 107

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--- 132
           F  S    RD         G           F+EY V+   +V  +   +P         
Sbjct: 108 FIGSR---RD---------G----------GFAEYIVVKRKNVFALPTDMPIEDGAFIEP 145

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           ++ G+      A+  A       V+I G G+IGL   + A   GA  +  +D+ SEK  +
Sbjct: 146 ITVGL-----HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLAL 200

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 251
            K FG  +  NS    + S  Q+   + +        E  G+   V+ A         + 
Sbjct: 201 AKSFGAMQTFNSS---EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQL 256

Query: 252 IVLGVDQPGSQLSLSSFE-VLHSGKILMGSL--FGGLKAKSDIPILLKRYMDKELELDKF 308
            ++G       L+ ++F  +L     ++GS   +       +     +   +++L L+  
Sbjct: 257 ALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPL 316

Query: 309 VTHEMKFEEINSAFDLLIKGK 329
           + H   FE    A   + +  
Sbjct: 317 IAHRGSFESFAQAVRDIARNA 337

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  168 bits (428), Expect = 1e-49
 Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 42/321 (13%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE +G +E V E V+G+ +GD VI H       C+ CR+ +   C    F    
Sbjct: 73  LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP--- 129

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR---ACLLSCGV 137
                         G  I        F+E+       V+K+   +   +      L+   
Sbjct: 130 --------------GLNID-----GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAG 170

Query: 138 STGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
            T   A  +    +  G+ V I G+G +G    +  ++     +I +DV  EK ++ +R 
Sbjct: 171 ITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL 230

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G    V+++    +   + ++++T G G +   + VG  + V        +  G+ I++G
Sbjct: 231 GADHVVDAR----RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVG 285

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
               G +L   +  V+ S     GSL G      ++  L+   +  ++ +        K 
Sbjct: 286 Y---GGELRFPTIRVISSEVSFEGSLVGNYV---ELHELVTLALQGKVRV---EVDIHKL 336

Query: 316 EEINSAFDLLIKGKCL-RCVI 335
           +EIN   + L KG+ L R V+
Sbjct: 337 DEINDVLERLEKGEVLGRAVL 357

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  161 bits (411), Expect = 3e-47
 Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 50/334 (14%)

Query: 12  GKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGN 69
            +  Q R   P+I+GHE  G V  +G  V+G+  GD   V  H +  C +C  CR  + +
Sbjct: 52  NEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIV--CGKCYACRRGQYH 109

Query: 70  LCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVP 126
           +C                                V     F+EY V+   ++ K   ++P
Sbjct: 110 VCQN-------------------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIP 144

Query: 127 PNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 183
           P  A L   L   V               G +V+I G G +GL     A+  GA  +I  
Sbjct: 145 PEYATLQEPLGNAVD----TVLAG--PISGKSVLITGAGPLGLLGIAVAKASGAYPVIVS 198

Query: 184 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA 242
           +    + E+ K+ G    +N        V + ++D+TDG G D   E  G    +++   
Sbjct: 199 EPSDFRRELAKKVGADYVINPFEE---DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQ 255

Query: 243 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
                 G+  +LG+      +  ++  ++     + G    G         + +     +
Sbjct: 256 AVTPA-GRVSLLGLYPGKVTIDFNNL-IIFKALTIYGIT--GRHLWETWYTVSRLLQSGK 311

Query: 303 LELDKFVTHEMK-FEEINSAFDLLIKGKCLRCVI 335
           L LD  +TH+ K F++   AF+L+  GK  + V 
Sbjct: 312 LNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVF 345

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  161 bits (410), Expect = 4e-47
 Identities = 65/322 (20%), Positives = 114/322 (35%), Gaps = 48/322 (14%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVI--PHFLADCTECVGCRSKKGNLCSAFPFKIS 79
           P + GHE  GVVE+VG  V     GD V    H +  C  C  CR+   ++C        
Sbjct: 58  PLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVC-------- 107

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---L 133
                       + +       + V     F+EY V+   +       +P   A +    
Sbjct: 108 -----------LNTQ------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPF 150

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
              V           +   G +V+I G G IGL  A   R  GA  I+  D    +    
Sbjct: 151 GNAV-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFA 205

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           + +     VN     ++ + +++  +T  G +   E  G  + + +       G G+  +
Sbjct: 206 RPYA-DRLVNPL---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARI 260

Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           LG+     +  L+  E++  G    G    G +                ++L   +TH +
Sbjct: 261 LGIPSDPIRFDLAG-ELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRL 317

Query: 314 KFEEINSAFDLLIKGKCLRCVI 335
                  AF LL  G+ ++ ++
Sbjct: 318 PLSRYREAFGLLASGQAVKVIL 339

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  162 bits (412), Expect = 8e-47
 Identities = 64/349 (18%), Positives = 106/349 (30%), Gaps = 60/349 (17%)

Query: 11  AGKPIQCRAVFPRILGHEAIGVVESVGENV------DGVVEGD--VVIPHFLADCTECVG 62
                     FP  LGHE  GVV   G              G+           C  C  
Sbjct: 81  GYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRP 138

Query: 63  CRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVV 119
           C     N C                            + +  +   +F+EY  +D  +  
Sbjct: 139 CAEGFPNHCEN-------------------------LNELGFNVDGAFAEYVKVDAKYAW 173

Query: 120 KV-------DPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 169
            +       +         L    S   +       R   +  G  VVI G G IGLA  
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAV 230

Query: 170 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 228
              +  GA+++I  +    +  + K  G    ++       +  + ++D T+G GA    
Sbjct: 231 AILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE---NFVEAVLDYTNGLGAKLFL 287

Query: 229 ECVGLASLVQEA--YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 286
           E  G+  LV         R       V  V +  +++ L+          ++GS   G  
Sbjct: 288 EATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHS 345

Query: 287 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
                P ++   M   +++ K ++  +  EEI      L   K L  V 
Sbjct: 346 GHGTFPRVI-SLMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  158 bits (401), Expect = 1e-45
 Identities = 74/315 (23%), Positives = 114/315 (36%), Gaps = 44/315 (13%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
             ILGHEA+G V  VG  V     GD VV+P  +         +                
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVVVP-AITPDWRTSEVQRGYHQHSG-------- 104

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV-------VKVDPTVPPNRACLL 133
                       +        V    F E+      HV         +   +P   A ++
Sbjct: 105 -----------GMLAGWKFSNVKDGVFGEF-----FHVNDADMNLAHLPKEIPLEAAVMI 148

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
              ++TG   A   AN+++G TV + G+G +GL    GA   GA RI  V       +I 
Sbjct: 149 PDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA 207

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 252
             +G T+ +N K   +  + + I+  TDG G D      G      +A    + G     
Sbjct: 208 LEYGATDIINYK---NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIG 263

Query: 253 VLGVDQPGSQLSL--SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 310
            +     G  + +  S + V    K + G L  G +    +  L+     K ++  K VT
Sbjct: 264 NVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRL--RMERLIDLVFYKRVDPSKLVT 321

Query: 311 HEMK-FEEINSAFDL 324
           H  + F+ I  AF L
Sbjct: 322 HVFRGFDNIEKAFML 336

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  156 bits (398), Expect = 3e-45
 Identities = 65/318 (20%), Positives = 113/318 (35%), Gaps = 38/318 (11%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P +LGHEA G VE VG +V  +  GD V     A       C+  + NL  +  F  +P 
Sbjct: 64  PMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP- 122

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 138
            P D                        +   + A   K+   V      L   LS G+ 
Sbjct: 123 -PDDGN-------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI- 161

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198
                A R   V +G  V++ G G IG+     A+  GA +++  D+ + +    K  G 
Sbjct: 162 ----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA 217

Query: 199 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258
              +       + +++ +        +   EC G  + +Q      R G G  +++G+  
Sbjct: 218 DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL-- 274

Query: 259 PGSQLSLSSFEVLHSGKILMGSL-FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 317
                ++           + G   +         P+ +     K + +   VTH    E+
Sbjct: 275 GSEMTTVPLLHAAIREVDIKGVFRYCN-----TWPVAISMLASKSVNVKPLVTHRFPLEK 329

Query: 318 INSAFDLLIKGKCLRCVI 335
              AF+   KG  L+ ++
Sbjct: 330 ALEAFETFKKGLGLKIML 347

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  155 bits (393), Expect = 1e-44
 Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 43/321 (13%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +  +    
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--- 118

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                         G          +++EY ++     +     +    A  L+C   T 
Sbjct: 119 --------------GINFD-----GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159

Query: 141 VGAAWRTANVEVGSTVVIF----GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
             A  R A+++   T+++     GLG++ + +A    + GA  IIGVDV  E  E  KR 
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIA--KAVSGA-TIIGVDVREEAVEAAKRA 215

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G    +N+     +     I  +T+  G D   +       +        K  GK +++G
Sbjct: 216 GADYVINAS---MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVG 271

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
           +   G+ L   +  +  S    +GSL G    +SD   +++  + +  ++   +T  MK 
Sbjct: 272 L--FGADLHYHAPLITLSEIQFVGSLVG---NQSDFLGIMR--LAEAGKVKPMITKTMKL 324

Query: 316 EEINSAFDLLIKGKCL-RCVI 335
           EE N A D L   K + R V+
Sbjct: 325 EEANEAIDNLENFKAIGRQVL 345

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  150 bits (381), Expect = 1e-42
 Identities = 65/317 (20%), Positives = 111/317 (35%), Gaps = 45/317 (14%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVI-PHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             +LGHE+ G V +V  +V  +  GD V I P  +  C  C  C + + N C    F  +
Sbjct: 73  DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVI--CNACEPCLTGRYNGCERVDFLST 130

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCG 136
           P +P           G              Y         K+   +      +   LS  
Sbjct: 131 PPVP-----------G----------LLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVA 168

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           +     A  + A V +G  V+I G G IGL     A+  GA  ++  D+   + +  K  
Sbjct: 169 L-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223

Query: 197 GVTEFVNSKNCGD-KSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254
                 +       +  ++ I++   G       EC G+ S +  A    + G GK  V+
Sbjct: 224 CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVI 282

Query: 255 GVDQPGSQLSLSSFEVLHSGKILMGSL-FGGLKAKSDIPILLKRYMDKELELDKFVTHEM 313
           GV    +++ +           L     +         P  ++   +  ++L + VTH  
Sbjct: 283 GV--GKNEIQIPFMRASVREVDLQFQYRYCN-----TWPRAIRLVENGLVDLTRLVTHRF 335

Query: 314 KFEEINSAFDLLIKGKC 330
             E+   AF+     K 
Sbjct: 336 PLEDALKAFETASDPKT 352

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  149 bits (379), Expect = 1e-42
 Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 43/321 (13%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILGHE  G +  VGE +  V +GD V+ +       C  CR  K N+C         
Sbjct: 59  LPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKN------- 110

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                     + + G+T +       FSEY ++  +  +    ++ P  A  L+   +T 
Sbjct: 111 ----------QIIPGQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTS 155

Query: 141 VGA---AWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRF 196
           +GA   A    +      V++ G+G +    +     L     I+G+    +  +     
Sbjct: 156 MGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215

Query: 197 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
           G       K+        +I  +TDG GA    + VG             +  G  I++G
Sbjct: 216 GADYVSEMKD-----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVG 269

Query: 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
           +   G ++SL +F+     K L+GS +G L    D+  +++     +++       ++  
Sbjct: 270 M--EGKRVSLEAFDTAVWNKKLLGSNYGSLN---DLEDVVRLSESGKIKP---YIIKVPL 321

Query: 316 EEINSAFDLLIKGKCL-RCVI 335
           ++IN AF  L +G+   R VI
Sbjct: 322 DDINKAFTNLDEGRVDGRQVI 342

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  149 bits (378), Expect = 3e-42
 Identities = 75/314 (23%), Positives = 115/314 (36%), Gaps = 41/314 (13%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
           P ++GHEA G V  VG+NV  + +GD V       C  C  C+  K NLC    F  +P 
Sbjct: 61  PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP- 119

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 138
            P D                      + Y V       K+   V      L   LS GV 
Sbjct: 120 -PDDGN-------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV- 158

Query: 139 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG- 197
                A R A V++G+TV++ G G IGL     A+  GA  ++       + E+ K  G 
Sbjct: 159 ----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGA 213

Query: 198 -VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
            VT  V+     + S+ + I        +   +C G    +       R G G  +++G+
Sbjct: 214 DVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGM 272

Query: 257 DQPGSQLSLSSFEVLHSGKILMGSL-FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 315
                 +++           +     +       D PI L+        + + VTH  K 
Sbjct: 273 --GSQMVTVPLVNACAREIDIKSVFRYCN-----DYPIALEMVASGRCNVKQLVTHSFKL 325

Query: 316 EEINSAFDLLIKGK 329
           E+   AF+   K  
Sbjct: 326 EQTVDAFEAARKKA 339

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  142 bits (359), Expect = 1e-39
 Identities = 52/315 (16%), Positives = 101/315 (32%), Gaps = 43/315 (13%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
             +LGHEA+GVV  V  N   + EGD  V                  + ++     +   
Sbjct: 58  HLVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFER 115

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSCGV 137
             +            G            SE+      ++V++  +       +  +S   
Sbjct: 116 GIVGAH---------G----------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITE 156

Query: 138 -STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL--CGATRIIGV---DVISEKFE 191
            +     A R+A     S+  + G GS+GL      ++   G   +  +   D      +
Sbjct: 157 KALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID 216

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 251
           I +    T   + +        + + D+     D+ +E  G      ++        G  
Sbjct: 217 IIEELDATYVDSRQT-----PVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVG 269

Query: 252 IVLGVDQPGS---QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF 308
            +LGV    +          E++   K L+GS+   ++      +   +    +  L+  
Sbjct: 270 ALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTK--LPKWFLEDL 327

Query: 309 VTHEMKFEEINSAFD 323
           VT      E  +AFD
Sbjct: 328 VTGVHPLSEFEAAFD 342

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  140 bits (355), Expect = 7e-39
 Identities = 58/334 (17%), Positives = 103/334 (30%), Gaps = 45/334 (13%)

Query: 18  RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 77
           +     +LGHEAIGVVE   E+  G  +GD+V+P     C  C  C   + + C    F 
Sbjct: 57  KGKDFLVLGHEAIGVVE---ESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG 113

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSC 135
            +     D         G             E+   D  ++VK+  ++         L+ 
Sbjct: 114 EAGIHKMD---------G----------FMREWWYDDPKYLVKIPKSIEDIGILAQPLAD 154

Query: 136 GV---------STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186
                         V              V++ G G IG+      R  G    +     
Sbjct: 155 IEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214

Query: 187 SEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL-ASLVQEAYACC 244
             + E          + NS N  DK      +  + G  D   +  G   +++       
Sbjct: 215 PTEVEQTVIEETKTNYYNSSNGYDK------LKDSVGKFDVIIDATGADVNILGNVIPLL 268

Query: 245 RKGWGKTIVLGVDQPGSQ--LSLSSFEVLHSGKILMGSLFGGLKA-KSDIPILLKRYMDK 301
            +  G   + G    GS      +  E++H+ K ++G + G     +  +  L       
Sbjct: 269 GRN-GVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLY 327

Query: 302 ELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
                  +T  +   +      +L + +     I
Sbjct: 328 PKAAKMLITKTVSINDEKELLKVLREKEHGEIKI 361

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  135 bits (341), Expect = 1e-36
 Identities = 69/347 (19%), Positives = 113/347 (32%), Gaps = 52/347 (14%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
             +LGHE  G V   G +V+ +  GD V +P F   C  C  C+     +C         
Sbjct: 62  GLVLGHEITGEVIEKGRDVENLQIGDLVSVP-FNVACGRCRSCKEMHTGVCL-------- 112

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVS-SFSEYTVLDIAHV--VKVDPTVPPNRAC----LL 133
                  +R     G         +   +EY ++  A    +K+               L
Sbjct: 113 ---TVNPARAGGAYGYV--DMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCL 167

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
           S  + TG   A  TA V  GSTV + G G +GLA A  ARL GA  +I  D+   +    
Sbjct: 168 SDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---------------ASLV 237
           K  G      S    D  + + I  +      D   + VG                A+++
Sbjct: 227 KAQGFEIADLSL---DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 283

Query: 238 QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG-GLK-------AKS 289
                  R   GK  + G+       ++ +   + S  I  G  +               
Sbjct: 284 NSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMK 342

Query: 290 DIPILLKRYMDKELELDK-FVTHEMKFEEINSAFDLLIKGKCLRCVI 335
               L++  M   + + +      +  ++    +     G   + VI
Sbjct: 343 YNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVI 389

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  134 bits (340), Expect = 2e-36
 Identities = 63/347 (18%), Positives = 112/347 (32%), Gaps = 51/347 (14%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
             +LGHE  G V   G +V+ +  GD V +P F   C  C  C+  + ++C       + 
Sbjct: 61  GHVLGHEITGEVVEKGSDVELMDIGDLVSVP-FNVACGRCRNCKEARSDVCEN-----NL 114

Query: 81  WMPRDQTSRFKDLRGETIHHF-------VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 133
             P      F    G  +  +       V V  +++Y +L      K           L+
Sbjct: 115 VNPDADLGAF----GFDLKGWSGGQAEYVLVP-YADYMLLKFGD--KEQAMEKIKDLTLI 167

Query: 134 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
           S  + TG      +A V+ GS V I G G +G   A GARL GA  +I  D   E+ ++ 
Sbjct: 168 SDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL 226

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL--------------ASLVQ 238
              G              +   I  +      D   + VG                  + 
Sbjct: 227 SDAGFETIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALN 283

Query: 239 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG-GLK-------AKSD 290
             +   R G G   + G+        ++         +  G ++   ++         + 
Sbjct: 284 SLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNY 342

Query: 291 IPILLKRYMDKELEL--DKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335
              L +  +  ++           +  ++    +    KG   + VI
Sbjct: 343 NRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVI 389

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  113 bits (286), Expect = 3e-29
 Identities = 77/331 (23%), Positives = 117/331 (35%), Gaps = 65/331 (19%)

Query: 20  VFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKI 78
             P I GHE +G V +VG  V  V EGD V +P   + C  C  C      LC       
Sbjct: 56  TLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC------- 108

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GV 137
                + Q +      G +++       + EY V D  +V  +   V       + C GV
Sbjct: 109 ----EKQQNT------GYSVN-----GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV 153

Query: 138 STGVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISEKFEI 192
           +       +  +   G  VVI G+G +G      A A G       R+  VD+   K  +
Sbjct: 154 TV--YKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL------RVAAVDIDDAKLNL 205

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252
            +R G    VN++   D   +  +     GGA              +A    R+G G   
Sbjct: 206 ARRLGAEVAVNAR---DTDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIA 260

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTH- 311
           + G+  P        F+V+  G  + GS+ G                D +  LD      
Sbjct: 261 LNGL--PPGDFGTPIFDVVLKGITIRGSIVGTRS-------------DLQESLDFAAHGD 305

Query: 312 ------EMKFEEINSAFDLLIKGKCL-RCVI 335
                   K +++N  F  L +GK   R V+
Sbjct: 306 VKATVSTAKLDDVNDVFGRLREGKVEGRVVL 336

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  112 bits (282), Expect = 1e-28
 Identities = 79/338 (23%), Positives = 132/338 (39%), Gaps = 69/338 (20%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFK 77
              P I GHE +G+VE VG  V  +  GD V IP   + C  C  C S +  LC      
Sbjct: 53  PKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------ 106

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-G 136
                   + +      G ++        ++EY      +VVK+   +    A  + C G
Sbjct: 107 -----EHQKNA------GYSVD-----GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAG 150

Query: 137 VSTGVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISEKFE 191
           V+T    A +    + G  V I+G+G +G      A A G        ++ VD+  EK E
Sbjct: 151 VTTY--KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN------VVAVDIGDEKLE 202

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 251
           + K  G    VN      +  ++ + +   GG              Q AY   R+G G  
Sbjct: 203 LAKELGADLVVNPL---KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GAC 257

Query: 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE--LDKFV 309
           +++G+  P  ++ +  F+ + +G  ++GS+ G                 K+L+  L    
Sbjct: 258 VLVGL--PPEEMPIPIFDTVLNGIKIIGSIVGTR---------------KDLQEALQFAA 300

Query: 310 TH-------EMKFEEINSAFDLLIKGKCL-RCVIWMGE 339
                        E+IN  FD ++KG+   R V+ + +
Sbjct: 301 EGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  111 bits (280), Expect = 3e-28
 Identities = 71/333 (21%), Positives = 117/333 (35%), Gaps = 67/333 (20%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 79
            P + GHE  GVV  +GENV G   GD   I      C  C  C     + C        
Sbjct: 60  LPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC-------- 111

Query: 80  PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVS 138
              P    S      G T        SF +Y   D      +       +   + C G++
Sbjct: 112 ---PHADLS------GYTHD-----GSFQQYATADAVQAAHIPQGTDLAQVAPILCAGIT 157

Query: 139 TGVGAAWRTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVISEKFEI 192
                A ++AN+  G  V I     GLGS+    A A G R      ++G+D    K E+
Sbjct: 158 VY--KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR------VLGIDGGEGKEEL 209

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252
            +  G   F++     D  +   ++  TDGGA          + ++ +    R   G T+
Sbjct: 210 FRSIGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTV 266

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE--LDKFVT 310
           ++G+   G++     F  +     ++GS  G                  +    LD F  
Sbjct: 267 LVGMP-AGAKCCSDVFNQVVKSISIVGSYVGNR---------------ADTREALDFFAR 310

Query: 311 H------EM-KFEEINSAFDLLIKGKCL-RCVI 335
                  ++     +   ++ + KG+ + R V+
Sbjct: 311 GLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVV 343

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 85.2 bits (211), Expect = 1e-18
 Identities = 58/332 (17%), Positives = 105/332 (31%), Gaps = 61/332 (18%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
             ++G +  GVV   G  V+    GD V+ H L+   E     +             +  
Sbjct: 118 YHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND------------TML 165

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 141
            P  +   F+   G            +E  ++    ++     +    A       ST  
Sbjct: 166 DPEQRIWGFETNFG----------GLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNST-- 213

Query: 142 GAAWR------TANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVIS--EKFEI 192
             A+R       A ++ G  V+I+G    +G    + A   GA  I    V+S  +K EI
Sbjct: 214 --AYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPIC---VVSSPQKAEI 268

Query: 193 GKRFGVTEFVNSKNCGDKSVSQI--------------IIDMTDG-GADYCFECVGLASLV 237
            +  G    ++    G +                   I ++T G   D  FE  G  +  
Sbjct: 269 CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFG 328

Query: 238 QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 297
             +    RKG G          G      +  +  S K ++GS F   +   +      R
Sbjct: 329 A-SVFVTRKG-GTITTCAS-TSGYMHEYDNRYLWMSLKRIIGSHFANYREAWE----ANR 381

Query: 298 YMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
            +  +  +   ++     E+   A   + +  
Sbjct: 382 LIA-KGRIHPTLSKVYSLEDTGQAAYDVHRNL 412

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 84.6 bits (210), Expect = 1e-18
 Identities = 65/315 (20%), Positives = 105/315 (33%), Gaps = 56/315 (17%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
           FP +   +  GVVE+VG++V     GD VI  F     + +   + +             
Sbjct: 83  FPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET------L 136

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                                      SEY VL     V    ++    A  L C   T 
Sbjct: 137 GGAHPGV-------------------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT- 176

Query: 141 VGAAWR----TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII--GVDVISEKFEIGK 194
              AW       ++  G  VV+ G G + L   + A+  GA  I+        EK +   
Sbjct: 177 ---AWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSR---EKLDRAF 230

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 253
             G    +N     ++   + +  +T   GAD+  E  G A L Q +        G+  V
Sbjct: 231 ALGADHGINRL---EEDWVERVYALTGDRGADHILEIAGGAGLGQ-SLKAVAPD-GRISV 285

Query: 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF---VT 310
           +GV   G ++S     +L    ++ G   G  +A  D        +   ++       + 
Sbjct: 286 IGV-LEGFEVSGPVGPLLLKSPVVQGISVGHRRALED--------LVGAVDRLGLKPVID 336

Query: 311 HEMKFEEINSAFDLL 325
              KF E+  A   L
Sbjct: 337 MRYKFTEVPEALAHL 351

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 71/322 (22%), Positives = 121/322 (37%), Gaps = 58/322 (18%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P +LG +  GVV++VG  V+G   GD V+ +    C  C  C + + NLC  +      
Sbjct: 57  LPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY------ 110

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                       + GE  H      +++EY VL  A++      +    A  +     T 
Sbjct: 111 -----------QILGEHRH-----GTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT- 153

Query: 141 VGAAWR----TANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVI-----SEKF 190
              AW+       V  G  V++   GS + +A  + A+L GA       VI      +K 
Sbjct: 154 ---AWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR------VIATAGSEDKL 204

Query: 191 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWG 249
              K  G  E VN          + +  +T G GAD   +  G A   +        G G
Sbjct: 205 RRAKALGADETVNYT---HPDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-G 259

Query: 250 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE--LDK 307
           +  + G    G + +L    V +    ++GS      +KS +  +L+   + +L+  + +
Sbjct: 260 RIAIAGA-SSGYEGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLKPVVGQ 315

Query: 308 FVTHEMKFEEINSAFDLLIKGK 329
                +  E       LL + +
Sbjct: 316 ----VLPLEAAAEGHRLLEERR 333

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 83.7 bits (207), Expect = 4e-18
 Identities = 51/331 (15%), Positives = 101/331 (30%), Gaps = 57/331 (17%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
              +LG +  GVV   G  V     GD VI H      E        G L          
Sbjct: 109 PYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVD-EQEPATHGDGMLG--------- 158

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                  +  +    ET          +EY V+  + ++     +    A +      T 
Sbjct: 159 -------TEQRAWGFETNF-----GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGT- 205

Query: 141 VGAAWR------TANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIG 193
              A+R       A ++ G  V+I+G    +G    +  +  G    + V   ++K    
Sbjct: 206 ---AYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAV 261

Query: 194 KRFGVTEFVNSKNCGD---------------KSVSQIIIDMTDGGADYCFECVGLASLVQ 238
           +  G    +N    G                + +++++++      D  FE  G  +   
Sbjct: 262 RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGL 321

Query: 239 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY 298
            +    R+G G  +  G    G   +  +  +    K ++GS     + +        R 
Sbjct: 322 -SVIVARRG-GTVVTCGS-SSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQA----TNRL 374

Query: 299 MDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
            +    +   ++      E   A  ++   +
Sbjct: 375 FESG-AVVPAMSAVYPLAEAAEACRVVQTSR 404

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 51/326 (15%), Positives = 89/326 (27%), Gaps = 68/326 (20%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
                 P + G+E +  V +VG NV G+  GD VI              +  G       
Sbjct: 79  GLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLG------- 120

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
                                         ++    V     +++V   +P   A  L  
Sbjct: 121 ------------------------------TWRTEAVFSEEALIQVPSDIPLQSAATLGV 150

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV---DVISEKFE 191
              T          ++ G +V+       +G AV + A   G   I  V     I +  +
Sbjct: 151 NPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSD 210

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 250
             K  G    +      +    ++     D         CVG      E      +G G 
Sbjct: 211 RLKSLGAEHVITE---EELRRPEMKNFFKDMPQPRLALNCVG-GKSSTELLRQLARG-GT 265

Query: 251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKEL------- 303
            +  G       +  S   ++     L G  +     K   P   K  +   L       
Sbjct: 266 MVTYGG-MAKQPVVASVSLLIFKDLKLRG-FWLSQWKKDHSPDQFKELIL-TLCDLIRRG 322

Query: 304 ELDKFVTHEMKFEEINSAFDLLIKGK 329
           +L      ++  ++  SA +  +K  
Sbjct: 323 QLTAPACSQVPLQDYQSALEASMKPF 348

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 71.3 bits (175), Expect = 5e-14
 Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 74/335 (22%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 81
              LG +  G V +VG +V  +  GD V                           ++ P 
Sbjct: 63  WAFLGTDYAGTVVAVGSDVTHIQVGDRVY----------------------GAQNEMCPR 100

Query: 82  MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST-- 139
            P                      +FS+YTV       K+   +   +A  L  G+ST  
Sbjct: 101 TPDQ-------------------GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAG 141

Query: 140 ------GVGAAW----RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISE 188
                 G+        +         V+++G   +      +  RL G   I      S 
Sbjct: 142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIA---TCSP 198

Query: 189 K-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 247
             F++ K  G  E  + +     +++Q I   T     Y  +C+         +A   + 
Sbjct: 199 HNFDLAKSRGAEEVFDYR---APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRA 255

Query: 248 WGKTIVL--GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK------RYM 299
            G  + L    +   ++  +++   L       GS +     +       +      R  
Sbjct: 256 GGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIA 315

Query: 300 DKELELDKFVTHEMK-----FEEINSAFDLLIKGK 329
            + +E  + V H ++     F+ I    +L+ KG+
Sbjct: 316 GQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 76/342 (22%), Positives = 119/342 (34%), Gaps = 92/342 (26%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFK 77
           +++P + GHE +G V  VG  V  V  GD V    L   C  C  C +   N C      
Sbjct: 68  SMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL- 126

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-G 136
                    T       G   +       +S + V +  ++++    +P +    L C G
Sbjct: 127 ---------TYASIYHDGTITY-----GGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG 172

Query: 137 VST-------GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVD 184
           ++        G+           G  + I GLG +G      A A G++         V 
Sbjct: 173 ITVYSPLKYFGLDEP--------GKHIGIVGLGGLGHVAVKFAKAFGSK---------VT 215

Query: 185 VISE----KFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASL 236
           VIS     K E  K FG   F+ S++    ++ +     IID                  
Sbjct: 216 VISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL---------- 265

Query: 237 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---------A 287
                    K  GK I++G   P   L L +F ++   KI+ GS  GG+K         A
Sbjct: 266 --LPLFGLLKSHGKLILVGA--PEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAA 321

Query: 288 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
           K +I        D E+         +  + +N+A + L K  
Sbjct: 322 KHNI------TADIEV---------ISTDYLNTAMERLAKND 348

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 67.8 bits (166), Expect = 6e-13
 Identities = 36/255 (14%), Positives = 61/255 (23%), Gaps = 71/255 (27%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
                G+E +  V  VG NV  +  GD VIP  +   T                      
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGT---------------------- 109

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD-----------PTVPPNR 129
                                     +  + + +    +K+              +  N+
Sbjct: 110 --------------------------WRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQ 143

Query: 130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIF--GLGSIGLAVAEGARLCGATRIIGV---- 183
              +S    T          +  G    I   G  ++G   ++  +L      I V    
Sbjct: 144 GATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDR 202

Query: 184 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD---GGADYCFECVGLASLVQEA 240
             + E     K  G T+ +       +     I +      G A     CVG        
Sbjct: 203 PNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGI 261

Query: 241 YACCRKGWGKTIVLG 255
                   G  +  G
Sbjct: 262 ARKLNNN-GLMLTYG 275

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 68/342 (19%), Positives = 115/342 (33%), Gaps = 92/342 (26%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFK 77
           + +P + GHE +G V  VG +V     GD+V +   +  C  C  C       C    + 
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW- 119

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-G 136
                    +     + G+          F++ TV+    VVK+   +   +A  L C G
Sbjct: 120 ---------SYNDVYINGQPTQ-----GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAG 165

Query: 137 VST-------GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVD 184
           V+        G+           G    I GLG +G     +A A G           V 
Sbjct: 166 VTVYSPLSHFGLKQP--------GLRGGILGLGGVGHMGVKIAKAMGHH---------VT 208

Query: 185 VISE----KFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASL 236
           VIS     + E  +  G  ++V   +      ++     +ID                  
Sbjct: 209 VISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL---------- 258

Query: 237 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---------A 287
             E Y    K  GK I++GV    + L   +  ++   K++ GS  G +K          
Sbjct: 259 --EPYLSLLKLDGKLILMGV--INNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCK 314

Query: 288 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
           +  +          E+         +K + +N+AF+ L K  
Sbjct: 315 EKGL------SSIIEV---------VKMDYVNTAFERLEKND 341

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 65/337 (19%), Positives = 111/337 (32%), Gaps = 78/337 (23%)

Query: 19  AVFPRILGHEAIGVVESVGENVD-GVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPF 76
              P ++GHE +G V  +G   + G+  G  V +   +  C EC  C++     C+ F  
Sbjct: 60  MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVT 119

Query: 77  KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC- 135
                     T       G      VS   ++ Y  +    VV +   +P + A  L C 
Sbjct: 120 ----------TYSQPYEDGY-----VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCG 164

Query: 136 GVSTGVGAAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS 187
           G++      +          G  V I GLG IG     ++ A GA            VIS
Sbjct: 165 GLTV-----YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAE---------TYVIS 210

Query: 188 ---EKFEIGKRFGVTEFVNSKNCGD--KSVSQ---IIIDMTDGGADYCFECVGLASLVQE 239
               K E   + G   ++ +   GD  +       +I+       D  F           
Sbjct: 211 RSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFN---------- 260

Query: 240 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 299
                 K  G+ + + +  P     LS          +  S  G +K   ++       +
Sbjct: 261 IMPKAMKVGGRIVSISI--PEQHEMLSLKPYGLKAVSISYSALGSIK---EL-----NQL 310

Query: 300 DKELEL--DKFVTHE-----MKFEEINSAFDLLIKGK 329
              L+L  +K +        +    ++ AF+ + KG 
Sbjct: 311 ---LKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGD 344

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 67/339 (19%), Positives = 119/339 (35%), Gaps = 85/339 (25%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFK 77
            V+P + GHE +G V +VG+ V+    GD+V +   +  C  C  C     N C      
Sbjct: 74  TVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG- 132

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV-DPTVPPNRACLLSC- 135
                    T                   +S+  V+   +V+++  P         L C 
Sbjct: 133 ---------TYNSPTPDEPGHTL----GGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA 179

Query: 136 GVSTGVGAAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS 187
           G++T     +   R      G  V + G+G +G     LA A GA          V   +
Sbjct: 180 GITT-----YSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH---------VVAFT 225

Query: 188 ---EKFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEA 240
               K E  K  G  E VNS+N  +  +  +    I++      +             + 
Sbjct: 226 TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL------------DD 273

Query: 241 YACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGLK---------AKSD 290
           +    K  G   ++G   P +   S   F ++   + + GS+ GG+          A+  
Sbjct: 274 FTTLLKRDGTMTLVGA--PATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHG 331

Query: 291 IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
           I        D E+         ++ ++IN A++ +++G 
Sbjct: 332 I------VADIEM---------IRADQINEAYERMLRGD 355

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 64.1 bits (157), Expect = 1e-11
 Identities = 74/334 (22%), Positives = 120/334 (35%), Gaps = 78/334 (23%)

Query: 19  AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFK 77
            ++P I GHE  G+++ VG+ V     GDVV +  F+  C  C  C+  +   C+   F 
Sbjct: 56  GIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFT 115

Query: 78  ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-G 136
                             E          +S   V+D  +V+ VD   P  +   L C G
Sbjct: 116 YD--------CLDSFHDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAG 162

Query: 137 VSTGVGAAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS- 187
           ++T     +   + + V  G+ V + G G +G      AVA GA          V V + 
Sbjct: 163 ITT-----YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAE---------VSVFAR 208

Query: 188 --EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
              K +     GV  F        + +   II       D             + Y    
Sbjct: 209 NEHKKQDALSMGVKHFYTDPKQCKEELD-FIISTIPTHYDL------------KDYLKLL 255

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSG-KILMGSLFGGLK---------AKSDIPILL 295
              G   ++G+        LS F+ +H G + + GSL GG+K          K +I    
Sbjct: 256 TYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNI---- 311

Query: 296 KRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329
             Y + +L         +  ++I++A+  L  GK
Sbjct: 312 --YPEIDL---------ILGKDIDTAYHNLTHGK 334

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 39/241 (16%), Positives = 77/241 (31%), Gaps = 58/241 (24%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
             R   P I G+E +G+VE+VG  V   + G  V+P                        
Sbjct: 57  AHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP------------------------ 92

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
                                         ++ EY       VV +  ++    A  +  
Sbjct: 93  -------------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYI 127

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
              T       T N++    +++     +IG   A+ +++    R+I V   ++  E   
Sbjct: 128 NPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELL 186

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 253
           R G    +++       + + ++++T+G GAD   + +G      E     R       +
Sbjct: 187 RLGAAYVIDTS---TAPLYETVMELTNGIGADAAIDSIG-GPDGNELAFSLR--PNGHFL 240

Query: 254 L 254
            
Sbjct: 241 T 241

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 34/223 (15%), Positives = 69/223 (30%), Gaps = 64/223 (28%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LG EA G+V  VG  V  +  GD V           +G                  
Sbjct: 57  LPSGLGTEAAGIVSKVGSGVKHIKAGDRV-----VYAQSALG------------------ 93

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA--CLLSCGVS 138
                                    ++S    +       +   +   +A    L     
Sbjct: 94  -------------------------AYSSVHNIIADKAAILPAAISFEQAAASFLK---- 124

Query: 139 TGVGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194
            G+       +T  ++     +     G +GL   + A+  GA  +IG    ++K +   
Sbjct: 125 -GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQKAQSAL 182

Query: 195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 236
           + G  + +N +   ++ + + + ++T G      ++ VG  + 
Sbjct: 183 KAGAWQVINYR---EEDLVERLKEITGGKKVRVVYDSVGRDTW 222

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 49/230 (21%), Positives = 78/230 (33%), Gaps = 78/230 (33%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LG E  GVVE+VG+ V     GD V     A  T  +G                  
Sbjct: 57  LPSGLGAEGAGVVEAVGDEVTRFKVGDRV-----AYGTGPLG------------------ 93

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                                    ++SE  VL  A++VK+      +        VS  
Sbjct: 94  -------------------------AYSEVHVLPEANLVKL-----AD-------SVSFE 116

Query: 141 VGAAW------------RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 187
             AA             +T  V+ G  ++     G +G    + A+  GA  +IG     
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSP 175

Query: 188 EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 236
           EK    K  G  E ++      + V++ ++++TDG      ++ VG  + 
Sbjct: 176 EKAAHAKALGAWETIDYS---HEDVAKRVLELTDGKKCPVVYDGVGQDTW 222

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 45/218 (20%), Positives = 80/218 (36%), Gaps = 60/218 (27%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P +LG EA G V + G+ V     GD V                               
Sbjct: 63  KPYVLGREASGTVVAKGKGVTNFEVGDQVA------------------------------ 92

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYT-VLDIAHVVKVDPTVPPNRACLLSCGVST 139
                               ++S S+F++Y+ +     V+K+          L + G+  
Sbjct: 93  --------------------YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQ 132

Query: 140 GVGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195
            + A        +V+ G  V++F   G +GL + +  ++ GA   I V    EK +I K 
Sbjct: 133 VLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAH-TIAVASTDEKLKIAKE 191

Query: 196 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 232
           +G    +N+     + + + ++  T+G G D  F+ VG
Sbjct: 192 YGAEYLINAS---KEDILRQVLKFTNGKGVDASFDSVG 226

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 56.5 bits (136), Expect = 4e-09
 Identities = 42/330 (12%), Positives = 86/330 (26%), Gaps = 73/330 (22%)

Query: 10  TAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGN 69
            A + +  R      +G+E  GVV   G +          +                   
Sbjct: 79  GAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV------------------- 119

Query: 70  LCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 129
                                           +  + +S+Y  +     + +     P  
Sbjct: 120 ------------------------------AAIGGAMYSQYRCIPADQCLVLPEGATPAD 149

Query: 130 -ACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVD 184
            A      ++     A     T  +E  S +V     S +G  + +     G  +++ + 
Sbjct: 150 GASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIV 203

Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYAC 243
              E+ ++ K  G     N+      +  Q + +     GA   F+  G   L  +   C
Sbjct: 204 RKQEQADLLKAQGAVHVCNA---ASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTC 260

Query: 244 CRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGLKAKSD---IPILLKRYM 299
                 K+         +    +  +  L +        FG           P L K   
Sbjct: 261 MEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGR 320

Query: 300 DKELELDKFVTHEMKFEEINSAFDLLIKGK 329
           ++   L + V       E+ + F      +
Sbjct: 321 ERANALKQRV-----VAELKTTFASHYSKE 345

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 56/220 (25%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ++G EA  VVE VG  V     G+ V       C   +G                  
Sbjct: 60  PPIVVGFEAAAVVEEVGPGVTDFTVGERV-----CTCLPPLG------------------ 96

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS-- 138
                                    ++S+  +     ++KV   +  +   L    +   
Sbjct: 97  -------------------------AYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGM 131

Query: 139 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 197
           T      +T  V+ G  V+I    G +G  +   AR  GAT +IG     EK E  ++ G
Sbjct: 132 TAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT-VIGTVSTEEKAETARKLG 190

Query: 198 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 236
               +N      +  ++++ ++T G G D  ++ +G  +L
Sbjct: 191 CHHTINYS---TQDFAEVVREITGGKGVDVVYDSIGKDTL 227

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 9/152 (5%)

Query: 106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSI 164
            ++E   +  ++++   P +    A  L     T   A  R   +  G TV++ G  G I
Sbjct: 113 GYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGI 172

Query: 165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223
           G A  + A+  GA ++I V   +   E  K  G    +      ++  ++ + + T G G
Sbjct: 173 GTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPL----EEGWAKAVREATGGAG 227

Query: 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255
            D   + +G      +A        G+ +V+G
Sbjct: 228 VDMVVDPIG-GPAFDDAVRTLASE-GRLLVVG 257

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 45/238 (18%), Positives = 79/238 (33%), Gaps = 56/238 (23%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P   G +  GV+E+VG+N     +GD V        +  +                   
Sbjct: 87  LPYTPGSDVAGVIEAVGDNASAFKKGDRVF------TSSTIS------------------ 122

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                         G           ++EY +     V K+   +   +   +     T 
Sbjct: 123 --------------G----------GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTA 158

Query: 141 VGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 199
             A   +A V+ G +V++ G    +GLA  + AR  G  +I+G     E  +I  + G  
Sbjct: 159 YRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH 217

Query: 200 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
           E  N +   + +    I       G D   E +     + +  +    G G+ IV+G 
Sbjct: 218 EVFNHR---EVNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLLSHG-GRVIVVGS 270

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 41/219 (18%), Positives = 66/219 (30%), Gaps = 66/219 (30%)

Query: 20  VFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
             P  +G E IG V ++G +       G  V                             
Sbjct: 82  KPPFDIGFEGIGEVVALGLSASARYTVGQAVA---------------------------- 113

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
                                 +++  SF+EYTV+  +    V P+V P    LL  G +
Sbjct: 114 ----------------------YMAPGSFAEYTVVPASIATPV-PSVKPEYLTLLVSGTT 150

Query: 139 TGVGAAW----RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193
                A+        +  G  V++    G  G    + ++      +IG     EK    
Sbjct: 151 -----AYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL 204

Query: 194 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232
           K  G    +N K    + V  ++      G D  +E VG
Sbjct: 205 KSLGCDRPINYK---TEPVGTVLKQEYPEGVDVVYESVG 240

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 3e-06
 Identities = 55/343 (16%), Positives = 96/343 (27%), Gaps = 132/343 (38%)

Query: 13  KPIQCRAV--FPRILGHEAIGVVESVGENVDGVV-EGDVVIP-HFLADCTECVGCRSKKG 68
               C+ V   P+        ++    E +D ++   D V     L          SK+ 
Sbjct: 31  DNFDCKDVQDMPK-------SILSK--EEIDHIIMSKDAVSGTLRLFWTL-----LSKQE 76

Query: 69  NLCSAF---------PFKISPWM-----PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD 114
            +   F          F +SP       P   T  + + R      +     F++Y V  
Sbjct: 77  EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSR 133

Query: 115 IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG---LAVAEG 171
           +   +K+       R  LL                +     V+I G+   G   +A  + 
Sbjct: 134 LQPYLKL-------RQALL---------------ELRPAKNVLIDGVLGSGKTWVA-LDV 170

Query: 172 ARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFEC 230
                          S K +    F +  F +N KNC        +++M           
Sbjct: 171 CL-------------SYKVQCKMDFKI--FWLNLKNCNSPET---VLEM----------- 201

Query: 231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV---LHSGKILMGSLFGGLKA 287
             L  L         +         +D   +  S  S  +   +HS +  +  L      
Sbjct: 202 --LQKL-------LYQ---------IDPNWTSRSDHSSNIKLRIHSIQAELRRLL----- 238

Query: 288 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 330
                   K Y +  L L   V +     +  +AF+L     C
Sbjct: 239 ------KSKPYENCLLVLLN-VQN----AKAWNAFNL----SC 266

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 50/324 (15%), Positives = 97/324 (29%), Gaps = 90/324 (27%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LG++  G V  +G +V+ V  GD V+                              
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVM----------------------GIA----- 99

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                    F D              ++EY       +++    +   +A      + T 
Sbjct: 100 --------GFPDHPC----------CYAEYVCASPDTIIQKLEKLSFLQA----ASLPTA 137

Query: 141 VGAAW---RTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVISEKFE 191
              A      A V+ G  V+I     G+G +   LA  +G  +                 
Sbjct: 138 GLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-------KRNHA 190

Query: 192 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 251
             K  G  + +N          +  +       D   + VG      ++  C ++  G  
Sbjct: 191 FLKALGAEQCINYH-------EEDFLLAISTPVDAVIDLVGGDVG-IQSIDCLKET-GC- 240

Query: 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPIL--LKRYMDKELELDKFV 309
           IV        ++   + +              GL  + +I  L  L + + ++ +L   +
Sbjct: 241 IVSVPTITAGRVIEVAKQK--------HRRAFGLLKQFNIEELHYLGKLVSED-KLRIEI 291

Query: 310 THEMKFEEINSAFDLL----IKGK 329
           +   +  E  +A +LL    ++GK
Sbjct: 292 SRIFQLSEAVTAHELLETGHVRGK 315

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 9/151 (5%)

Query: 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IG 165
           ++E     +  V K+   +  + A        T     +  AN+  G +V++   G  +G
Sbjct: 97  WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVG 156

Query: 166 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 225
            AVA+         + G    + K E  K   VT   +     +    Q +  ++  G D
Sbjct: 157 QAVAQLCSTVPNVTVFGT-ASTFKHEAIKD-SVTHLFDR----NADYVQEVKRISAEGVD 210

Query: 226 YCFECVGLASLVQEAYACCRKGWGKTIVLGV 256
              +C+       +  +  +   G  I+ G 
Sbjct: 211 IVLDCLC-GDNTGKGLSLLKPL-GTYILYGS 239

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 54/290 (18%), Positives = 93/290 (32%), Gaps = 83/290 (28%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P ILG +  G V +VG  VD    GD V            G                  
Sbjct: 63  LPAILGMDLAGTVVAVGPEVDSFRVGDAVF-----------GL----------------- 94

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS----CG 136
                 T     L+G          + +++  +D   +       P      L+      
Sbjct: 95  ------TGGVGGLQG----------THAQFAAVDARLLAS----KPAA----LTMRQASV 130

Query: 137 VSTGVGAAW----RTANVEVGSTVVIF----GLGS--IGLAVAEGARLCGATRIIGVDVI 186
           +      AW      A V+ G TV+I     G+G   I +A+A GAR+    R       
Sbjct: 131 LPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATAR------- 183

Query: 187 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCR 245
               E  +  G T          +       + T G G D  ++ +G   ++  +++  +
Sbjct: 184 GSDLEYVRDLGATPIDA-----SREPEDYAAEHTAGQGFDLVYDTLG-GPVLDASFSAVK 237

Query: 246 KGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPIL 294
           +  G  +V  +     +L+  SF +  +SG   + +L           +L
Sbjct: 238 RF-GH-VVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML 285

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 21 FPRILGHEAIGVVESVGENVDGVVEGDVV 49
           PR+LG +AIGVVESVG  V    +GD+V
Sbjct: 59 APRVLGFDAIGVVESVGNEVTMFNQGDIV 87

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 21 FPRILGHEAIGVVESVGENVDGVVEGDVV 49
             + G +  GV+  VG  VD  + G  V
Sbjct: 58 NGHVPGVDGAGVIVKVGAKVDSKMLGRRV 86

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 184
           G  ++I+G G IG ++A  A   G   +IGV+
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGM-HVIGVN 167

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 12/44 (27%), Positives = 15/44 (34%)

Query: 6   PSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVV 49
              +           FP  LG +  GVV   G +V     GD V
Sbjct: 79  NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 22  PRILGHEAIGVVESVGENVDGVVEGDVV 49
            +++G++A G+V +VG +V     GD V
Sbjct: 82  WKVIGYDAAGIVSAVGPDVTLFRPGDEV 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.22
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.74
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.66
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.58
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.55
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.5
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.35
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.18
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.09
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.08
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.08
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.07
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.02
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.99
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.98
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.84
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.8
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.79
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.66
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.63
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.6
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.52
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.47
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.43
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.41
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.37
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.34
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.3
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.3
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.29
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.21
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.2
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.17
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.14
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.14
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.12
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.12
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.1
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.09
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.09
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.09
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.07
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.07
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.07
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.07
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.06
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.06
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.04
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.03
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.02
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.02
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.01
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.01
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.0
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.0
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.99
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.99
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.99
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.99
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.98
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.97
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.96
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.95
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.94
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.93
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.92
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.92
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.9
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.89
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.87
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.86
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.84
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.84
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.84
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.84
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.83
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.83
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.82
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.82
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.81
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.81
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.81
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.81
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.81
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.8
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.78
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.78
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.77
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.76
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.75
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.75
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.74
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.73
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.73
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.73
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.72
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.69
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.68
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.68
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.67
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.67
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.67
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.67
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.66
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.66
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.65
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.65
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.65
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.65
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.64
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.63
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.63
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.63
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.62
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.62
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.62
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.61
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.61
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.61
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.61
1spx_A	278	Short-chain reductase family member (5L265); paral	96.6
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.6
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.6
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.6
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.59
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.59
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.59
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.59
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.59
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.58
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.58
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.58
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.57
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.57
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.57
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.57
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.57
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.56
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.56
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.56
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.56
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.55
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.54
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.53
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.53
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.53
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.53
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.53
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.52
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.52
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.51
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.51
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.5
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.5
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.5
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.49
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.48
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.47
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.47
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.46
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.45
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.45
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.45
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.45
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.44
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.43
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.43
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.43
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.43
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.42
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.42
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.42
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.42
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.41
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.41
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.41
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.4
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.4
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.4
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.39
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.39
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.39
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.39
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.39
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.38
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.38
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.38
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.37
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.37
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.37
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.37
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.36
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.36
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.36
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.36
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.36
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.36
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.35
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.35
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.34
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.34
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.34
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.33
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.33
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.32
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	96.32
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.31
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.31
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.31
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.31
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.3
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.3
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.29
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.29
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.28
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.26
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.25
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.23
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.23
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.23
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.22
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.22
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.21
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.21
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.2
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.2
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.2
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.2
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.19
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	96.19
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.19
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.18
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.18
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.18
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.18
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.18
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.18
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.17
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.17
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.15
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.15
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.15
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.14
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.14
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.13
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.12
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.12
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.12
4had_A	350	Probable oxidoreductase protein; structural genomi	96.11
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.1
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.1
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.09
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.09
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.09
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.07
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.07
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.06
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.05
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.05
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.04
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.04
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.03
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.02
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.02
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.02
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.01
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.01
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.0
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.0
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.99
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.99
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.98
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.96
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.95
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.95
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.94
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.94
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.94
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.93
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.93
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.92
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.92
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.92
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.91
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.91
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.91
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.9
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.89
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.88
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.88
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.86
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.86
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.86
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.86
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.85
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.84
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.82
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.81
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.81
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.8
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.79
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.78
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.78
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.78
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.78
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.78
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.78
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.77
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.77
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.76
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.76
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.75
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.74
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.74
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.73
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.73
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.72
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.72
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.71
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.7
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.7
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.7
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.7
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.7
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.69
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.67
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.67
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.66
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.66
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.64
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.64
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	95.64
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.64
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.63
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.63
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.62
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.61
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.61
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.61
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.56
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.54
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.53
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.51
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.5
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.5
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.5
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.5
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.49
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.49
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.48
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	95.46
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.46
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.45
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.45
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.45
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	95.44
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.44
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.44
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.43
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.42
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.41
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.4
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.39
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.39
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.39
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.39
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.39
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	95.39
2o07_A	304	Spermidine synthase; structural genomics, structur	95.39
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.39
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.36
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.33
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.33
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.33
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.33
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.32
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.32
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.32
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.31
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.31
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.31
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.31
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.29
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.29
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.27
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.27
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.27
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.25
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.24
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.23

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.7e-52  Score=386.97  Aligned_cols=318  Identities=49%  Similarity=0.942  Sum_probs=275.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~   96 (339)
                      ..++|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+.......|+. .+|..++. .+|.
T Consensus        59 ~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~-~~g~  137 (378)
T 3uko_A           59 EGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFS-VNGK  137 (378)
T ss_dssp             TCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEE-ETTE
T ss_pred             CCCCCccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccc-cCCc
Confidence            357899999999999999999999999999999999999999999999999999875421113322 23322222 3455


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                      ...++++.|+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|
T Consensus       138 ~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G  217 (378)
T 3uko_A          138 PIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG  217 (378)
T ss_dssp             EEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHT
T ss_pred             ccccccCCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence            55666777899999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc-CCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g  255 (339)
                      +++|++++++++++++++++|+++++++.+ ...++.+.+++++++++|+||||+|++..++.+++++++ + |+++.+|
T Consensus       218 a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G  295 (378)
T 3uko_A          218 ASRIIGIDIDSKKYETAKKFGVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVG  295 (378)
T ss_dssp             CSCEEEECSCTTHHHHHHTTTCCEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECS
T ss_pred             CCeEEEEcCCHHHHHHHHHcCCcEEEcccc-CchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEc
Confidence            978999999999999999999999999872 116899999999888999999999998779999999999 4 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      .........++...++. ++++.++.++.+..++++.++++++.+|++++.++++++|+|+++++||+.+.+++..|+||
T Consensus       296 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi  374 (378)
T 3uko_A          296 VAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL  374 (378)
T ss_dssp             CCCTTCCEEECTHHHHT-TCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEE
T ss_pred             ccCCCCccccCHHHHhc-CcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEE
Confidence            86545556666666665 89999987766555678999999999999999899999999999999999999888779999


Q ss_pred             EeCC
Q 019535          336 WMGE  339 (339)
Q Consensus       336 ~~~~  339 (339)
                      ++++
T Consensus       375 ~~~~  378 (378)
T 3uko_A          375 DTSK  378 (378)
T ss_dssp             ETTC
T ss_pred             ecCC
Confidence            9875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.7e-49  Score=366.24  Aligned_cols=313  Identities=39%  Similarity=0.715  Sum_probs=259.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+.......|+..+|..++. .+|...
T Consensus        60 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~  138 (373)
T 1p0f_A           60 SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPI  138 (373)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEE
T ss_pred             CCCCcccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccc-cCCccc
Confidence            4689999999999999999999999999999999999999999999999999987542111133322211110 011111


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+..+.|+|+||++++++.++++|++++++ ||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|++
T Consensus       139 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~  217 (373)
T 1p0f_A          139 YNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGAS  217 (373)
T ss_dssp             BCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred             ccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            222234699999999999999999999999 9999999999999888889999999999999999999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC-cEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~  257 (339)
                      +|++++++++++++++++|+++++++++. .+++.+.+++++++++|+||||+|.+..++.+++++++ + |+++.+|..
T Consensus       218 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~  295 (373)
T 1p0f_A          218 RIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLA  295 (373)
T ss_dssp             EEEEECSCGGGHHHHHHTTCSEEECGGGC-SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCC
T ss_pred             eEEEECCCHHHHHHHHHcCCcEEEecccc-cchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccC
Confidence            89999999999999999999999987630 14688889888877999999999997779999999999 6 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .......++...++.++ ++.++..+.+. .++++++++++.+|++++.++++++|+|+++++||+.+++++..|++|++
T Consensus       296 ~~~~~~~~~~~~~~~~~-~i~g~~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          296 SPNERLPLDPLLLLTGR-SLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             CTTCCEEECTHHHHTTC-EEEECSGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             CCCCccccCHHHhccCc-eEEeeccCCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            43334566666677777 99888654332 26799999999999998888889999999999999999887767999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-49  Score=365.88  Aligned_cols=314  Identities=42%  Similarity=0.765  Sum_probs=261.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+.......|+..+|..++. .+|...
T Consensus        60 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~  138 (374)
T 1cdo_A           60 DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKGRKV  138 (374)
T ss_dssp             TSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEE-ETTEEE
T ss_pred             CCCCcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccc-cCCccc
Confidence            4689999999999999999999999999999999989999999999999999986542100133222211110 111111


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|++
T Consensus       139 ~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~  218 (374)
T 1cdo_A          139 LQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK  218 (374)
T ss_dssp             EEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred             ccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            22223469999999999999999999999999999999999999888889999999999999999999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC-cEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~  257 (339)
                      +|++++++++++++++++|+++++++++ ..+++.+.+++++++++|++||++|.+..++.+++++++ + |+++.+|..
T Consensus       219 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~  296 (374)
T 1cdo_A          219 RIIAVDLNPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWT  296 (374)
T ss_dssp             EEEEECSCGGGHHHHHHTTCCEEECGGG-CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCC
T ss_pred             EEEEEcCCHHHHHHHHHhCCceEEeccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCC
Confidence            8999999999999999999999998763 014688888888877999999999997779999999999 7 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .. ....++...++.++ ++.++..+.+..+++++++++++.+|++++.++++++|+|+++++||+.+++++..|++|++
T Consensus       297 ~~-~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          297 DL-HDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             SS-SCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CC-CCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            43 34556666777777 99988655433346789999999999998888889999999999999999888777999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.8e-50  Score=370.46  Aligned_cols=314  Identities=30%  Similarity=0.516  Sum_probs=261.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+ .+|+.|.+|+.+++++|.+.......|...+|..++...+|...
T Consensus        57 ~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~  135 (371)
T 1f8f_A           57 VPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVV  135 (371)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------C
T ss_pred             CCCCcccCcccceEEEEeCCCCCCCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccc
Confidence            36899999999999999999999999999999988 99999999999999999864310001222222111100000000


Q ss_pred             -ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           99 -HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 -~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                       .+....|+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+
T Consensus       136 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga  215 (371)
T 1f8f_A          136 NDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGA  215 (371)
T ss_dssp             BCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTC
T ss_pred             cccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence             0112346999999999999999999999999999999999999988888899999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++|++++++++++++++++|+++++++++   .++.+.+++++++++|+|||++|.+..++.++++++++ |+++.+|..
T Consensus       216 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  291 (371)
T 1f8f_A          216 SIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAP  291 (371)
T ss_dssp             SEEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCC
T ss_pred             CeEEEECCCHHHHHHHHHcCCCEEecCCc---cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCC
Confidence            67999999999999999999999999887   78889999988779999999999977799999999997 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .......+++..++.|++++.++..+....+++++++++++.+|++++.+++++ |+|+++++|++.++++...|+||.+
T Consensus       292 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~  370 (371)
T 1f8f_A          292 QLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKI  370 (371)
T ss_dssp             STTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEee
Confidence            433345677777888899999987654333457899999999999998888888 9999999999999888777999987


Q ss_pred             C
Q 019535          338 G  338 (339)
Q Consensus       338 ~  338 (339)
                      +
T Consensus       371 ~  371 (371)
T 1f8f_A          371 A  371 (371)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2e-49  Score=367.19  Aligned_cols=315  Identities=43%  Similarity=0.813  Sum_probs=261.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+.......|+..+|..++. .+|..+
T Consensus        58 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~  136 (373)
T 2fzw_A           58 GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTI  136 (373)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEE
T ss_pred             CCCCccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCccccc-cccccc
Confidence            4689999999999999999999999999999999999999999999999999986421000132222211110 112122


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+..+.|+|+||++++++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|++
T Consensus       137 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~  216 (373)
T 2fzw_A          137 LHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGAS  216 (373)
T ss_dssp             BCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred             ccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            22233469999999999999999999999999999999999999888889999999999999999999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC-cEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~  257 (339)
                      +|++++++++++++++++|+++++++++ ...++.+.+++++++++|++||++|.+..++.+++++++ + |+++.+|..
T Consensus       217 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~  294 (373)
T 2fzw_A          217 RIIGVDINKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVA  294 (373)
T ss_dssp             EEEEECSCGGGHHHHHHHTCSEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCC
T ss_pred             eEEEEcCCHHHHHHHHHcCCceEecccc-ccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecC
Confidence            8999999999999999999999998763 014688889888877999999999997779999999999 6 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .......++...++.++ ++.++.++.+..+++++++++++.+|++++.++++++|+|+++++||+.+++++..|++|.+
T Consensus       295 ~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          295 ASGEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             CTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            43334566666677777 99988655433346789999999999998888899999999999999999888777999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=6e-50  Score=369.86  Aligned_cols=290  Identities=23%  Similarity=0.390  Sum_probs=259.7

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|           
T Consensus        72 ~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-----------  137 (370)
T 4ej6_A           72 PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIHRDG-----------  137 (370)
T ss_dssp             CCCSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-----------
T ss_pred             CCCCCeecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCCCCC-----------
Confidence            35789999999999999999999999999999999999999999999999999987764   5665555           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|+||++++++.++++|+++++++|| +..++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+
T Consensus       138 --------~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga  207 (370)
T 4ej6_A          138 --------GFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGA  207 (370)
T ss_dssp             --------SSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             --------cceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                    99999999999999999999999998 555999999976 78899999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHH---hcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID---MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~---~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ++|+++++++++.++++++|++.++++++   .++.+.+++   ++++++|+||||+|....++.++++++++ |+++.+
T Consensus       208 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~  283 (370)
T 4ej6_A          208 TTVILSTRQATKRRLAEEVGATATVDPSA---GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVIL  283 (370)
T ss_dssp             SEEEEECSCHHHHHHHHHHTCSEEECTTS---SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHcCCCEEECCCC---cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEE
Confidence            88999999999999999999999999988   889999988   77679999999999887799999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce--eE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LR  332 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~--~k  332 (339)
                      |.........++...++.+++++.++....    .+++++++++.+|++++.++++++|+|+++++|++.+.++..  .|
T Consensus       284 G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~k  359 (370)
T 4ej6_A          284 GVLPQGEKVEIEPFDILFRELRVLGSFINP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVL  359 (370)
T ss_dssp             SCCCTTCCCCCCHHHHHHTTCEEEECCSCT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEE
T ss_pred             eccCCCCccccCHHHHHhCCcEEEEeccCh----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEE
Confidence            986554466788888999999999986433    569999999999999999999999999999999999987763  38


Q ss_pred             EEEEeCC
Q 019535          333 CVIWMGE  339 (339)
Q Consensus       333 vvl~~~~  339 (339)
                      +++++++
T Consensus       360 vv~~~~~  366 (370)
T 4ej6_A          360 VIPSAER  366 (370)
T ss_dssp             ECCC---
T ss_pred             EEEcccc
Confidence            8887753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=9e-49  Score=362.85  Aligned_cols=313  Identities=41%  Similarity=0.776  Sum_probs=260.2

Q ss_pred             CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535           21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH  100 (339)
Q Consensus        21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~  100 (339)
                      +|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+.......|+..+|..++. .+|....+
T Consensus        61 ~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~  139 (374)
T 2jhf_A           61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHH  139 (374)
T ss_dssp             SSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBC
T ss_pred             CCcccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCccccc-cccccccc
Confidence            89999999999999999999999999999999999999999999999999987543101133222211110 01111112


Q ss_pred             ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEE
Q 019535          101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRI  180 (339)
Q Consensus       101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~V  180 (339)
                      ....|+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+++|
T Consensus       140 ~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~V  219 (374)
T 2jhf_A          140 FLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARI  219 (374)
T ss_dssp             STTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred             ccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence            22346999999999999999999999999999999999999988888999999999999999999999999999999789


Q ss_pred             EEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC-cEEEEeccCCC
Q 019535          181 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQP  259 (339)
Q Consensus       181 i~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~  259 (339)
                      ++++++++++++++++|+++++++++. .+++.+.+++++++++|++||++|.+..++.+++++++ + |+++.+|....
T Consensus       220 i~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~  297 (374)
T 2jhf_A          220 IGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPD  297 (374)
T ss_dssp             EEECSCGGGHHHHHHTTCSEEECGGGC-SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCT
T ss_pred             EEEcCCHHHHHHHHHhCCceEeccccc-chhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCC
Confidence            999999999999999999999987630 14688888888877999999999997779999999999 6 99999997643


Q ss_pred             CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .....++...++.++ ++.++..+.+...++++++++++.+|++++.++++++|+|+++++||+.++++...|++|.+
T Consensus       298 ~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          298 SQNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            334566666777777 99888655433346789999999999998888899999999999999999888767999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=8.2e-49  Score=363.38  Aligned_cols=313  Identities=40%  Similarity=0.738  Sum_probs=259.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCC----CCCCCCCCCCCcccccccC
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP----FKISPWMPRDQTSRFKDLR   94 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~----~~~~~g~~~~g~~~~~~~~   94 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+..    .....|+..+|..++. .+
T Consensus        59 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~-~~  137 (376)
T 1e3i_A           59 ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFT-CK  137 (376)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEE-ET
T ss_pred             CCCCcccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccc-cC
Confidence            468999999999999999999999999999999999999999999999999998643    0000133222211110 01


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL  174 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~  174 (339)
                      |....++...|+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.
T Consensus       138 g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~  217 (376)
T 1e3i_A          138 GRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKI  217 (376)
T ss_dssp             TEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred             CcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence            11112222346999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC-cEEEE
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIV  253 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~  253 (339)
                      +|+++|++++++++++++++++|+++++++++. .+++.+.+++++++++|+||||+|.+..++.+++++++ + |+++.
T Consensus       218 ~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~  295 (376)
T 1e3i_A          218 AGASRIIAIDINGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTV  295 (376)
T ss_dssp             TTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-SSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEE
T ss_pred             cCCCeEEEEcCCHHHHHHHHHhCCcEEEccccc-cchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEE
Confidence            999789999999999999999999999987630 14688888888877999999999997779999999999 6 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEE
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC  333 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kv  333 (339)
                      +|..  .....++...++.++ ++.++..+....+++++++++++.+|++++.++++++|+|+++++||+.++++...|+
T Consensus       296 ~G~~--~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kv  372 (376)
T 1e3i_A          296 VGAK--VDEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRT  372 (376)
T ss_dssp             CCCS--SSEEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEE
T ss_pred             ECCC--CCccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceE
Confidence            9973  344567777777778 9998865543334678999999999999888889999999999999999988876799


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      +|.+
T Consensus       373 vi~~  376 (376)
T 1e3i_A          373 ILTF  376 (376)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=8.3e-49  Score=361.74  Aligned_cols=289  Identities=22%  Similarity=0.314  Sum_probs=252.8

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~   96 (339)
                      ..++|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+.+++|.+..+   .|.. .+|          
T Consensus        69 ~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~G----------  135 (363)
T 3m6i_A           69 IVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVPG----------  135 (363)
T ss_dssp             BCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSCC----------
T ss_pred             cCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCCc----------
Confidence            45789999999999999999999999999999999999999999999999999988764   4433 334          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                               +|+||++++++.++++|+ +++++||++. ++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|
T Consensus       136 ---------~~aey~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G  203 (363)
T 3m6i_A          136 ---------LLRRYVNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAG  203 (363)
T ss_dssp             ---------SCBSEEEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT
T ss_pred             ---------cceeEEEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                     999999999999999999 9999999885 889999987 7889999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCC--CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSK--NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~--~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      +++|++++++++++++++++ ++.++++.  ....+++.+.+++++++ ++|++|||+|++..++.++++++++ |+++.
T Consensus       204 a~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~  281 (363)
T 3m6i_A          204 ACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFV  281 (363)
T ss_dssp             CCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEE
Confidence            95599999999999999999 65555543  11125788899999988 9999999999987799999999997 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC-cee-
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG-KCL-  331 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~-~~~-  331 (339)
                      +|....  ...++...++.+++++.++...    .++++++++++.+|++++.++++++|+++++++||+.++++ ... 
T Consensus       282 ~G~~~~--~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~  355 (363)
T 3m6i_A          282 IGVGKN--EIQIPFMRASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAI  355 (363)
T ss_dssp             CCCCCS--CCCCCHHHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCS
T ss_pred             EccCCC--CccccHHHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeE
Confidence            997543  3456777888899999988643    57899999999999999899999999999999999999887 344 


Q ss_pred             EEEEEeCC
Q 019535          332 RCVIWMGE  339 (339)
Q Consensus       332 kvvl~~~~  339 (339)
                      |++|+.+|
T Consensus       356 Kvvi~~~~  363 (363)
T 3m6i_A          356 KVQIQSLE  363 (363)
T ss_dssp             EEEEECC-
T ss_pred             EEEEecCC
Confidence            99999865

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=2.6e-48  Score=356.21  Aligned_cols=291  Identities=23%  Similarity=0.351  Sum_probs=257.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|+++|||++|+|+++|++|+++++||+|++.+...|+.|.+|+.+++++|....+   +|+..+|            
T Consensus        51 ~~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G------------  115 (346)
T 4a2c_A           51 HYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG------------  115 (346)
T ss_dssp             SSSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC------------
T ss_pred             CCCCccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCccc---ccCCCCc------------
Confidence            4789999999999999999999999999999999999999999999999999988765   6766666            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|+||++++++.++++|+++++++||+++ ++.++++ +....+++++++|||+|+|++|++++|+|+++|++
T Consensus       116 -------~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~  186 (346)
T 4a2c_A          116 -------GFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAK  186 (346)
T ss_dssp             -------SSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred             -------ccccccccchheEEECCCCCCHHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCc
Confidence                   99999999999999999999999999876 5555555 67888999999999999999999999999999997


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+++++++++++++++++|+++++|+++   .+..+.++.++++ ++|++||++|.+..++.++++++++ |+++.+|..
T Consensus       187 ~vi~~~~~~~k~~~a~~lGa~~~i~~~~---~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~  262 (346)
T 4a2c_A          187 SVTAIDISSEKLALAKSFGAMQTFNSSE---MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTL  262 (346)
T ss_dssp             EEEEEESCHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCC
T ss_pred             EEEEEechHHHHHHHHHcCCeEEEeCCC---CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEecc
Confidence            7889999999999999999999999998   8888888888888 9999999999998899999999997 999999986


Q ss_pred             CCCCc-ccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          258 QPGSQ-LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      ..+.. ...++..++.|++++.|++.+...  ..++++++++++.+|++++.++++++|+|+++++||+.+++++.. |+
T Consensus       263 ~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKv  342 (346)
T 4a2c_A          263 HQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKV  342 (346)
T ss_dssp             SSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEE
T ss_pred             CCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEE
Confidence            54332 234455678889999998654322  345789999999999999999999999999999999999888766 99


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      ||.+
T Consensus       343 Vl~P  346 (346)
T 4a2c_A          343 LLIP  346 (346)
T ss_dssp             EECC
T ss_pred             EEEC
Confidence            9864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2.6e-48  Score=357.39  Aligned_cols=289  Identities=22%  Similarity=0.332  Sum_probs=252.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|.+..+   +|.. .+|           
T Consensus        61 ~~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-----------  126 (356)
T 1pl8_A           61 VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-----------  126 (356)
T ss_dssp             CSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-----------
T ss_pred             CCCCcccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCCC-----------
Confidence            3689999999999999999999999999999999999999999999999999987653   4432 234           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|+||++++++.++++|+++++++|+++. ++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+
T Consensus       127 --------~~aey~~v~~~~~~~iP~~l~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga  196 (356)
T 1pl8_A          127 --------NLCRFYKHNAAFCYKLPDNVTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA  196 (356)
T ss_dssp             --------SCBSEEEEEGGGEEECCTTSCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             --------ccccEEEeehHHEEECcCCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                    99999999999999999999999998764 889999987 77899999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++|++++++++++++++++|++++++++.....++.+.+++.+++++|+|||++|.+..++.++++++++ |+++.+|..
T Consensus       197 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  275 (356)
T 1pl8_A          197 AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLG  275 (356)
T ss_dssp             SEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCC
T ss_pred             CEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecC
Confidence            7899999999999999999999999987100156777888877668999999999987789999999997 999999974


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                      .  ....++...++.+++++.++...    .++++++++++.+|++++.++++++|+++++++||+.++++...|+||++
T Consensus       276 ~--~~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  349 (356)
T 1pl8_A          276 S--EMTTVPLLHAAIREVDIKGVFRY----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKC  349 (356)
T ss_dssp             C--SCCCCCHHHHHHTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             C--CCCccCHHHHHhcceEEEEeccc----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeC
Confidence            3  33556777788899999987532    46799999999999998888899999999999999999888434999988


Q ss_pred             C
Q 019535          338 G  338 (339)
Q Consensus       338 ~  338 (339)
                      +
T Consensus       350 ~  350 (356)
T 1pl8_A          350 D  350 (356)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.5e-48  Score=356.89  Aligned_cols=285  Identities=25%  Similarity=0.399  Sum_probs=255.7

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEE-eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ...+|.++|||++|+|+++|++|++|++|||| +.++..+|+.|.+|+.+++++|.+...   .|+..+|          
T Consensus        54 ~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~G----------  120 (340)
T 3s2e_A           54 KPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYSVNG----------  120 (340)
T ss_dssp             CCCSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC----------
T ss_pred             CCCCCcccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCCCCC----------
Confidence            35799999999999999999999999999999 556778999999999999999988764   5666555          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                               +|+||++++++.++++|+++++++|+.+++++.|||+++ +..+++++++|||+|+|++|++++|+|+.+|
T Consensus       121 ---------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G  190 (340)
T 3s2e_A          121 ---------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMG  190 (340)
T ss_dssp             ---------SSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT
T ss_pred             ---------cceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence                     999999999999999999999999999999999999977 6779999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|+++++++++.++++++|+++++++++   .++.+.+++ +.+++|++||++|+...++.++++++++ |+++.+|.
T Consensus       191 a-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~  264 (340)
T 3s2e_A          191 L-RVAAVDIDDAKLNLARRLGAEVAVNARD---TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGL  264 (340)
T ss_dssp             C-EEEEEESCHHHHHHHHHTTCSEEEETTT---SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSC
T ss_pred             C-eEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCC
Confidence            9 9999999999999999999999999988   788888888 4448999999999888899999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ..  ....++...++.+++++.++....   +++++++++++.+|++++.   .++|+++++++||+.+++++.. |+||
T Consensus       265 ~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv  336 (340)
T 3s2e_A          265 PP--GDFGTPIFDVVLKGITIRGSIVGT---RSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRLREGKVEGRVVL  336 (340)
T ss_dssp             CS--SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEE
T ss_pred             CC--CCCCCCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHhCCCCce---EEEEeHHHHHHHHHHHHcCCCceEEEE
Confidence            64  345677778888999999986543   4679999999999988763   4788999999999999998876 9999


Q ss_pred             EeCC
Q 019535          336 WMGE  339 (339)
Q Consensus       336 ~~~~  339 (339)
                      ++++
T Consensus       337 ~~~~  340 (340)
T 3s2e_A          337 DFSR  340 (340)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            9875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-48  Score=354.10  Aligned_cols=287  Identities=26%  Similarity=0.394  Sum_probs=252.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~   97 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|.+..+   +|.. .+|           
T Consensus        58 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-----------  123 (352)
T 1e3j_A           58 VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDDG-----------  123 (352)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBCC-----------
T ss_pred             CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCCc-----------
Confidence            4689999999999999999999999999999999999999999999999999987653   4432 233           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|+||++++++.++++|+++++++|+++. ++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+
T Consensus       124 --------~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga  193 (352)
T 1e3j_A          124 --------NLARYYVHAADFCHKLPDNVSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA  193 (352)
T ss_dssp             --------SCBSEEEEEGGGEEECCTTSCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             --------cceeEEEeChHHeEECcCCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                    99999999999999999999999998764 889999987 77899999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcC---C-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD---G-GADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~---g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                       +|++++++++++++++++|+++++++++  ..++.+.+++.++   + ++|++||++|....++.++++++++ |+++.
T Consensus       194 -~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~  269 (352)
T 1e3j_A          194 -FVVCTARSPRRLEVAKNCGADVTLVVDP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLML  269 (352)
T ss_dssp             -EEEEEESCHHHHHHHHHTTCSEEEECCT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEE
T ss_pred             -EEEEEcCCHHHHHHHHHhCCCEEEcCcc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEE
Confidence             7999999999999999999999998762  1466777887775   5 8999999999987789999999997 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc--ee
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CL  331 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~--~~  331 (339)
                      +|...  ....++...++.+++++.++...    .+++.++++++.+|++++.++++++|+++++++||+.+++++  ..
T Consensus       270 ~G~~~--~~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~  343 (352)
T 1e3j_A          270 VGMGS--QMVTVPLVNACAREIDIKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTI  343 (352)
T ss_dssp             CSCCS--SCCCCCHHHHHTTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCS
T ss_pred             EecCC--CCccccHHHHHhcCcEEEEeccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCce
Confidence            99743  33456677788889999987532    467999999999999988888999999999999999998886  34


Q ss_pred             EEEEEeCC
Q 019535          332 RCVIWMGE  339 (339)
Q Consensus       332 kvvl~~~~  339 (339)
                      |+||++++
T Consensus       344 Kvvi~~~~  351 (352)
T 1e3j_A          344 KVMISCRQ  351 (352)
T ss_dssp             EEEEECCC
T ss_pred             EEEEecCC
Confidence            99999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2.6e-48  Score=356.37  Aligned_cols=287  Identities=24%  Similarity=0.404  Sum_probs=242.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+...   +|...+|            
T Consensus        59 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G------------  123 (348)
T 2d8a_A           59 IKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG------------  123 (348)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEE---TTTSSCC------------
T ss_pred             CCCCCccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCCCCC------------
Confidence            4789999999999999999999999999999999989999999999999999987653   4544444            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|+||++++++.++++|+++++++||+++ ++.|||+++ +.+++ ++++|||+|+|++|++++|+|+..|++
T Consensus       124 -------~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~  193 (348)
T 2d8a_A          124 -------VFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAY  193 (348)
T ss_dssp             -------SSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             -------cCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                   99999999999999999999999999886 889999987 67889 999999999999999999999999986


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|++++++++++++++++|+++++++++   +++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.+|..
T Consensus       194 ~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~  269 (348)
T 2d8a_A          194 PVIVSEPSDFRRELAKKVGADYVINPFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLY  269 (348)
T ss_dssp             SEEEECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCC
T ss_pred             EEEEECCCHHHHHHHHHhCCCEEECCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccC
Confidence            7999999999999999999999999887   7899999999888 9999999999977799999999997 999999975


Q ss_pred             CCCCcccccH-HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeec-hhhHHHHHHHHhcCceeEEEE
Q 019535          258 QPGSQLSLSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       258 ~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~-l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      ..  ...++. ..++.+++++.++....  ..++++++++++.+|++++.++++++|+ ++++++|++.++++...|+||
T Consensus       270 ~~--~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi  345 (348)
T 2d8a_A          270 PG--KVTIDFNNLIIFKALTIYGITGRH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVF  345 (348)
T ss_dssp             SS--CCCCCHHHHTTTTTCEEEECCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEE
T ss_pred             CC--CcccCchHHHHhCCcEEEEecCCC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEE
Confidence            43  345666 66778899999875432  1357899999999999888888999999 999999999997754459999


Q ss_pred             EeC
Q 019535          336 WMG  338 (339)
Q Consensus       336 ~~~  338 (339)
                      +++
T Consensus       346 ~~~  348 (348)
T 2d8a_A          346 MLK  348 (348)
T ss_dssp             EC-
T ss_pred             eeC
Confidence            874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=2.4e-48  Score=357.17  Aligned_cols=294  Identities=25%  Similarity=0.351  Sum_probs=253.4

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.++++.|........++...+             
T Consensus        51 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------  117 (352)
T 3fpc_A           51 ERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKD-------------  117 (352)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBC-------------
T ss_pred             CCCCcccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCC-------------
Confidence            3679999999999999999999999999999999999999999999999999865432111222233             


Q ss_pred             ecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           99 HHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                            |+|+||+++++.  .++++|+++++++|++++++++|||+++ +.++++++++|||+|+|++|++++|+|+.+|
T Consensus       118 ------G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G  190 (352)
T 3fpc_A          118 ------GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLG  190 (352)
T ss_dssp             ------CSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT
T ss_pred             ------CcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                  399999999976  9999999999999999999999999986 7889999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +++|++++++++++++++++|+++++++++   .++.+.+++++++ ++|++||++|++..++.++++++++ |+++.+|
T Consensus       191 a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G  266 (352)
T 3fpc_A          191 AGRIFAVGSRKHCCDIALEYGATDIINYKN---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVN  266 (352)
T ss_dssp             CSSEEEECCCHHHHHHHHHHTCCEEECGGG---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECC
T ss_pred             CcEEEEECCCHHHHHHHHHhCCceEEcCCC---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEec
Confidence            978999999999999999999999999988   8899999999998 9999999999977799999999997 9999999


Q ss_pred             cCCCCCcccccHHH--HhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeec-hhhHHHHHHHHhcCc-e-
Q 019535          256 VDQPGSQLSLSSFE--VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK-C-  330 (339)
Q Consensus       256 ~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~-l~~~~~A~~~~~~~~-~-  330 (339)
                      .......+.++...  +..++.++.++....  .+++++++++++.+|++++.++++++|+ |+++++||+.++++. . 
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~  344 (352)
T 3fpc_A          267 YLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDL  344 (352)
T ss_dssp             CCCSCSEEEEETTTTGGGTBCEEEEEBCCCC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTC
T ss_pred             ccCCCCceecchhHhhhhccccEEEEeeccC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCc
Confidence            76544444444322  234678888765321  2356899999999999999889999999 999999999998864 3 


Q ss_pred             eEEEEEeC
Q 019535          331 LRCVIWMG  338 (339)
Q Consensus       331 ~kvvl~~~  338 (339)
                      .|+||+++
T Consensus       345 ~Kvvi~~~  352 (352)
T 3fpc_A          345 IKPVVILA  352 (352)
T ss_dssp             SEEEEECC
T ss_pred             EEEEEEeC
Confidence            49999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-48  Score=354.75  Aligned_cols=280  Identities=25%  Similarity=0.430  Sum_probs=248.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|            
T Consensus        71 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G------------  135 (359)
T 1h2b_A           71 PKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG------------  135 (359)
T ss_dssp             CCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC------------
T ss_pred             CCCCeecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccCCCC------------
Confidence            4689999999999999999999999999999988889999999999999999987653   5554445            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccc---cccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC---LLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARL  174 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa---~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~la~~  174 (339)
                             +|+||++++++.++++|+++++++||   .+++++.|||+++.+. ++++++++|||+|+|++|++++|+|+.
T Consensus       136 -------~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~  208 (359)
T 1h2b_A          136 -------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV  208 (359)
T ss_dssp             -------SSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred             -------cccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence                   99999999999999999999999998   7888999999987665 899999999999999999999999999


Q ss_pred             c-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHH--HHHHHHHHhhcCCcE
Q 019535          175 C-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLAS--LVQEAYACCRKGWGK  250 (339)
Q Consensus       175 ~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~--~~~~~~~~l~~~~G~  250 (339)
                      + |+ +|++++++++++++++++|+++++|+++   + +.+.+++++++ ++|++||++|++.  .++.++++  ++ |+
T Consensus       209 ~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~  280 (359)
T 1h2b_A          209 MTPA-TVIALDVKEEKLKLAERLGADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GR  280 (359)
T ss_dssp             HCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EE
T ss_pred             cCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CE
Confidence            9 99 8999999999999999999999999887   6 88889999888 9999999999985  68888887  76 99


Q ss_pred             EEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       251 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ++.+|.....   .++...++.+++++.++....   .+++.++++++.+|++++  .+ ++|+++++++|++.++++..
T Consensus       281 ~v~~g~~~~~---~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~  351 (359)
T 1h2b_A          281 LIIVGYGGEL---RFPTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEV  351 (359)
T ss_dssp             EEECCCSSCC---CCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCC
T ss_pred             EEEEeCCCCC---CCCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCC
Confidence            9999975432   566667788999999876432   457899999999998764  46 99999999999999998876


Q ss_pred             e-EEEEEe
Q 019535          331 L-RCVIWM  337 (339)
Q Consensus       331 ~-kvvl~~  337 (339)
                      . |+||++
T Consensus       352 ~gKvvv~~  359 (359)
T 1h2b_A          352 LGRAVLIP  359 (359)
T ss_dssp             SSEEEEEC
T ss_pred             ceEEEeeC
Confidence            5 999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.8e-48  Score=354.62  Aligned_cols=287  Identities=23%  Similarity=0.340  Sum_probs=254.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|            
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G------------  119 (343)
T 2dq4_A           55 IRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVDRDG------------  119 (343)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC------------
T ss_pred             CCCCCcCCccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCCCCC------------
Confidence            4689999999999999999999999999999999999999999999999999987653   4544444            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|+||++++++.++++|+++++++|+++. ++.|||+++.+.+++ ++++|||+|+|++|++++|+|+.+|++
T Consensus       120 -------~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~  190 (343)
T 2dq4_A          120 -------GFAEYVVVPAENAWVNPKDLPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAG  190 (343)
T ss_dssp             -------SSBSEEEEEGGGEEEECTTSCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             -------cceeEEEEchHHeEECCCCCCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                   99999999999999999999999999875 788999987657889 999999999999999999999999986


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|++++++++++++++++ +++++++++   +++.+.+++++++++|++||++|.+..++.++++++++ |+++.+|...
T Consensus       191 ~Vi~~~~~~~~~~~~~~l-a~~v~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~  265 (343)
T 2dq4_A          191 PILVSDPNPYRLAFARPY-ADRLVNPLE---EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS  265 (343)
T ss_dssp             SEEEECSCHHHHGGGTTT-CSEEECTTT---SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             EEEEECCCHHHHHHHHHh-HHhccCcCc---cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence            799999999999999999 999999887   78999999888339999999999977699999999997 9999999753


Q ss_pred             CCCcccccH-HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535          259 PGSQLSLSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM  337 (339)
Q Consensus       259 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~  337 (339)
                        ....++. ..++.|++++.++....  ..++++++++++.+|++++.++++++|+++++++|++.++++...|+||++
T Consensus       266 --~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~  341 (343)
T 2dq4_A          266 --DPIRFDLAGELVMRGITAFGIAGRR--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDP  341 (343)
T ss_dssp             --SCEEECHHHHTGGGTCEEEECCSCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEET
T ss_pred             --CCceeCcHHHHHhCceEEEEeecCC--CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEee
Confidence              3456676 67788899999875431  246799999999999988888899999999999999999887668999987


Q ss_pred             C
Q 019535          338 G  338 (339)
Q Consensus       338 ~  338 (339)
                      +
T Consensus       342 ~  342 (343)
T 2dq4_A          342 K  342 (343)
T ss_dssp             T
T ss_pred             C
Confidence            5

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.1e-47  Score=358.95  Aligned_cols=287  Identities=20%  Similarity=0.284  Sum_probs=253.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCC------CCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCccccc
Q 019535           18 RAVFPRILGHEAIGVVESVGENV------DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFK   91 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~   91 (339)
                      ..++|.++|||++|+|+++|++|      ++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|     
T Consensus        88 ~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~G-----  159 (404)
T 3ip1_A           88 LTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVDG-----  159 (404)
T ss_dssp             CBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-----
T ss_pred             cCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCCC-----
Confidence            45799999999999999999999      899999999999999999999999999999988764   6666555     


Q ss_pred             ccCCceeecccccccccceEEeeccceEEcCCCCCc------cccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHH
Q 019535           92 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP------NRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSI  164 (339)
Q Consensus        92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~------~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~i  164 (339)
                                    +|+||++++++.++++|++++.      .++++++.+++|||+++... ++++++++|||+|+|++
T Consensus       160 --------------~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~v  225 (404)
T 3ip1_A          160 --------------AFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPI  225 (404)
T ss_dssp             --------------SSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHH
T ss_pred             --------------CCcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHH
Confidence                          9999999999999999998863      45788888999999987655 48999999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHH
Q 019535          165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYA  242 (339)
Q Consensus       165 G~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~  242 (339)
                      |++++|+|+.+|+++|++++++++++++++++|+++++++++   .++.+.+++++++ ++|+||||+|++ ..++.+++
T Consensus       226 G~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~  302 (404)
T 3ip1_A          226 GLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEE  302 (404)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHH
Confidence            999999999999988999999999999999999999999988   8999999999998 999999999998 34777888


Q ss_pred             Hh----hcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          243 CC----RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       243 ~l----~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      ++    +++ |+++.+|....  ...++...++.+++++.++....  ..+++.++++++.+| +++.++++++|+|+++
T Consensus       303 ~l~~~~~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~  376 (404)
T 3ip1_A          303 VIWRARGIN-ATVAIVARADA--KIPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEI  376 (404)
T ss_dssp             HHHHCSCCC-CEEEECSCCCS--CEEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGH
T ss_pred             HHHhccCCC-cEEEEeCCCCC--CCcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHH
Confidence            88    997 99999998643  35678888889999999886322  246799999999999 9988899999999999


Q ss_pred             HHHHHHHhcCceeEEEEEeC
Q 019535          319 NSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       319 ~~A~~~~~~~~~~kvvl~~~  338 (339)
                      ++||+.+..   .|+||+++
T Consensus       377 ~~A~~~~~~---GKvvl~~~  393 (404)
T 3ip1_A          377 PEYIKRLQT---DKSLVKVT  393 (404)
T ss_dssp             HHHHHHTTT---CTTCSCEE
T ss_pred             HHHHHHHhC---CcEEEecC
Confidence            999999873   36666553

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.8e-47  Score=350.43  Aligned_cols=287  Identities=25%  Similarity=0.377  Sum_probs=248.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC--CCCCCCCCCcccccccCC
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK--ISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~--~~~g~~~~g~~~~~~~~~   95 (339)
                      +.++|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+.+++|......  ...|+..+|         
T Consensus        53 ~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G---------  123 (345)
T 3jv7_A           53 AYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPG---------  123 (345)
T ss_dssp             CSCSSEECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCC---------
T ss_pred             CCCCCcccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCc---------
Confidence            357899999999999999999999999999999999999999999999999999432110  002222333         


Q ss_pred             ceeecccccccccceEEee-ccceEEcCCCCCccccccccchhhhhhHHHHH-hcCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535           96 ETIHHFVSVSSFSEYTVLD-IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGLGSIGLAVAEGAR  173 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~-~~~~~~~~~VLI~G~G~iG~~a~~la~  173 (339)
                                +|+||++++ ++.++++|+ +++++||.++++++|||+++.+ ..+++++++|||+|+|++|++++|+|+
T Consensus       124 ----------~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~  192 (345)
T 3jv7_A          124 ----------SMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILR  192 (345)
T ss_dssp             ----------SSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHH
T ss_pred             ----------eeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                      999999999 999999999 9999999999999999998876 458999999999999999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+|..+|++++++++++++++++|+++++++++    ++.+.+++++++ ++|++|||+|++..++.++++++++ |+++
T Consensus       193 ~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv  267 (345)
T 3jv7_A          193 AVSAARVIAVDLDDDRLALAREVGADAAVKSGA----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHIS  267 (345)
T ss_dssp             HHCCCEEEEEESCHHHHHHHHHTTCSEEEECST----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEE
T ss_pred             HcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEE
Confidence            994449999999999999999999999998764    788999999988 9999999999997799999999997 9999


Q ss_pred             EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535          253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-  331 (339)
Q Consensus       253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-  331 (339)
                      .+|.... ....++. .++.+++++.++....   .++++++++++.+|++++   ++++|+++++++||+.+.+++.. 
T Consensus       268 ~~G~~~~-~~~~~~~-~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~G  339 (345)
T 3jv7_A          268 VVGIHAG-AHAKVGF-FMIPFGASVVTPYWGT---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRG  339 (345)
T ss_dssp             ECSCCTT-CCEEEST-TTSCTTCEEECCCSCC---HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSS
T ss_pred             EECCCCC-CCCCcCH-HHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCce
Confidence            9997643 2345554 6778899999886443   467999999999998876   45899999999999999998876 


Q ss_pred             EEEEEe
Q 019535          332 RCVIWM  337 (339)
Q Consensus       332 kvvl~~  337 (339)
                      |+||.+
T Consensus       340 kvvv~p  345 (345)
T 3jv7_A          340 RGVVVP  345 (345)
T ss_dssp             EEEECC
T ss_pred             eEEeCC
Confidence            999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=5.8e-47  Score=346.13  Aligned_cols=284  Identities=26%  Similarity=0.431  Sum_probs=250.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|.+|+.+++++|.+...   .|+..+|           
T Consensus        53 ~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-----------  118 (339)
T 1rjw_A           53 PKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-----------  118 (339)
T ss_dssp             CCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-----------
T ss_pred             CCCCeeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcce---eecCCCC-----------
Confidence            4689999999999999999999999999999876644 699999999999999987653   4544445           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|+||++++++.++++|+++++++||.+++++.|||+++.. .+++++++|||+|+|++|++++|+|+..|+
T Consensus       119 --------~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga  189 (339)
T 1rjw_A          119 --------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL  189 (339)
T ss_dssp             --------SSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             --------cceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                    99999999999999999999999999999999999998755 489999999999998899999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|++.++++.+   +++.+.+++.+ +++|++||++|.+..++.++++++++ |+++.+|..
T Consensus       190 -~Vi~~~~~~~~~~~~~~lGa~~~~d~~~---~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  263 (339)
T 1rjw_A          190 -NVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLP  263 (339)
T ss_dssp             -EEEEECSCHHHHHHHHHTTCSEEECTTT---SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCC
T ss_pred             -EEEEEeCCHHHHHHHHHCCCCEEecCCC---ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEeccc
Confidence             9999999999999999999999999887   68888888877 68999999999977799999999997 999999976


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW  336 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~  336 (339)
                      .  ....++...++.+++++.++....   .++++++++++.+|++++.   +++|+++++++|++.+++++.. |+||+
T Consensus       264 ~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~  335 (339)
T 1rjw_A          264 P--EEMPIPIFDTVLNGIKIIGSIVGT---RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLT  335 (339)
T ss_dssp             S--SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEE
T ss_pred             C--CCCccCHHHHHhCCcEEEEeccCC---HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEe
Confidence            4  235667777888999999875432   3578999999999988764   4899999999999999888755 99999


Q ss_pred             eCC
Q 019535          337 MGE  339 (339)
Q Consensus       337 ~~~  339 (339)
                      +++
T Consensus       336 ~~~  338 (339)
T 1rjw_A          336 LED  338 (339)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=7.7e-47  Score=345.92  Aligned_cols=286  Identities=23%  Similarity=0.364  Sum_probs=252.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|.+..+   +|+..+|            
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~~~G------------  119 (343)
T 2eih_A           55 LPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEHRHG------------  119 (343)
T ss_dssp             CCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTSSCC------------
T ss_pred             CCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccc---cCcCCCc------------
Confidence            4689999999999999999999999999999999989999999999999999987654   5554445            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                             +|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+ |++|++++|+++..|+
T Consensus       120 -------~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~  192 (343)
T 2eih_A          120 -------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA  192 (343)
T ss_dssp             -------SSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC
T ss_pred             -------cceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence                   99999999999999999999999999899999999998877678999999999998 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++.++++.+   .++.+.+++.+++ ++|++||++|... ++.++++++++ |+++.+|.
T Consensus       193 -~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~  266 (343)
T 2eih_A          193 -RVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRRLTGGKGADKVVDHTGALY-FEGVIKATANG-GRIAIAGA  266 (343)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTS---TTHHHHHHHHTTTTCEEEEEESSCSSS-HHHHHHHEEEE-EEEEESSC
T ss_pred             -EEEEEeCCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCCHHH-HHHHHHhhccC-CEEEEEec
Confidence             9999999999999999999999999887   6788888888877 9999999999544 99999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      .... ...++...++.+++++.++...   ..++++++++++.+|+++  ++++++|+++++++||+.++++... |+|+
T Consensus       267 ~~~~-~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv  340 (343)
T 2eih_A          267 SSGY-EGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVL  340 (343)
T ss_dssp             CCSC-CCCCCTTHHHHTTCEEEECCSC---CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEE
T ss_pred             CCCC-cCccCHHHHHhCCcEEEEecCc---cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEE
Confidence            6432 2235666677889999987532   256799999999999775  4578999999999999999887655 9999


Q ss_pred             EeC
Q 019535          336 WMG  338 (339)
Q Consensus       336 ~~~  338 (339)
                      ++.
T Consensus       341 ~~~  343 (343)
T 2eih_A          341 QVG  343 (343)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            863

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=5.1e-47  Score=353.79  Aligned_cols=295  Identities=21%  Similarity=0.268  Sum_probs=250.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC-----CCCCCCCCCccccccc
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-----ISPWMPRDQTSRFKDL   93 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-----~~~g~~~~g~~~~~~~   93 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|.+....     ..+|+...        
T Consensus        58 ~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~--------  129 (398)
T 2dph_A           58 VPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK--------  129 (398)
T ss_dssp             CCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBS--------
T ss_pred             CCCCcccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccC--------
Confidence            46899999999999999999999999999999999999999999999999999861100     01232100        


Q ss_pred             CCceeecccccccccceEEeecc--ceEEcCCCCCccc----cccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHH
Q 019535           94 RGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  167 (339)
Q Consensus        94 ~~~~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~  167 (339)
                              ...|+|+||++++++  .++++|+++++++    |++++++++|||+++ +.++++++++|||+|+|++|++
T Consensus       130 --------~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~  200 (398)
T 2dph_A          130 --------GWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRC  200 (398)
T ss_dssp             --------SCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHH
T ss_pred             --------CCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHH
Confidence                    012499999999987  8999999999998    888999999999987 7789999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccH-HHHHHHhcCC-CccEEEEcCCCHH----------
Q 019535          168 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSV-SQIIIDMTDG-GADYCFECVGLAS----------  235 (339)
Q Consensus       168 a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~-~~~l~~~~~g-~~d~v~d~~g~~~----------  235 (339)
                      ++|+|+.+|+++|++++++++++++++++|++ ++++.+   .++ .+.+++++++ ++|+|||++|+..          
T Consensus       201 aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~  276 (398)
T 2dph_A          201 AAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTE  276 (398)
T ss_dssp             HHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSB
T ss_pred             HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccc
Confidence            99999999987899999999999999999995 888877   665 8889999888 9999999999752          


Q ss_pred             ----HHHHHHHHhhcCCcEEEEeccCCC-----------CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhC
Q 019535          236 ----LVQEAYACCRKGWGKTIVLGVDQP-----------GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD  300 (339)
Q Consensus       236 ----~~~~~~~~l~~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~  300 (339)
                          .++.++++++++ |+++.+|....           .....++...++.|++++.++...   ..+++.++++++.+
T Consensus       277 ~~~~~~~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~  352 (398)
T 2dph_A          277 TPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILW  352 (398)
T ss_dssp             CTTHHHHHHHHHEEEE-EEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHhcC-CEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHc
Confidence                589999999997 99999987521           123456666778889999876432   24678999999999


Q ss_pred             CCCC--CcccceeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535          301 KELE--LDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       301 g~l~--~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~  338 (339)
                      |+++  +.++++++|+|+++++||+.+.++...|+||.++
T Consensus       353 g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~~  392 (398)
T 2dph_A          353 DQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDPH  392 (398)
T ss_dssp             TCCHHHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECTT
T ss_pred             CCCCccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEecC
Confidence            9988  7677889999999999999998876689999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.3e-47  Score=350.15  Aligned_cols=293  Identities=25%  Similarity=0.345  Sum_probs=249.4

Q ss_pred             CCCCcccCCceeEEEEEecCCCC------CcCCCCEEeeccCCCCCCCcccc-CCCCCCCCCCCCCCCCCCCC-CCcccc
Q 019535           19 AVFPRILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCR-SKKGNLCSAFPFKISPWMPR-DQTSRF   90 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~-~~~~~~c~~~~~~~~~g~~~-~g~~~~   90 (339)
                      ..+|.++|||++|+|+++| +|+      +|++||||+..+..+|+.|.+|+ .+++++|.+...   +|+.. .+    
T Consensus        69 ~~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~----  140 (380)
T 1vj0_A           69 VPLPIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCS----  140 (380)
T ss_dssp             CCSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSS----
T ss_pred             CCCCcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccC----
Confidence            4689999999999999999 999      99999999999999999999999 999999986543   34310 00    


Q ss_pred             cccCCceeecccccccccceEEe-eccceEEcCCCCCcc-ccccccchhhhhhHHHHHhcC-CCCCCEEEEEccCHHHHH
Q 019535           91 KDLRGETIHHFVSVSSFSEYTVL-DIAHVVKVDPTVPPN-RACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLA  167 (339)
Q Consensus        91 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~lp~~~~~~-~aa~l~~~~~ta~~al~~~~~-~~~~~~VLI~G~G~iG~~  167 (339)
                              ......|+|+||+++ +++.++++|++++++ +|++++ +++|||+++ +.++ ++++++|||+|+|++|++
T Consensus       141 --------~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~  210 (380)
T 1vj0_A          141 --------EYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLF  210 (380)
T ss_dssp             --------STTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHH
T ss_pred             --------CCCCCCccccceEEEcccceEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHH
Confidence                    000012399999999 999999999999999 777777 999999987 6678 999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC---CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHH
Q 019535          168 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK---NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYAC  243 (339)
Q Consensus       168 a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~---~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~  243 (339)
                      ++|+|+.+|+.+|++++++++++++++++|++++++++   +   .++.+.+++++++ ++|+|||++|.+..++.++++
T Consensus       211 aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~  287 (380)
T 1vj0_A          211 GVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSEL  287 (380)
T ss_dssp             HHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHH
T ss_pred             HHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHH
Confidence            99999999944999999999999999999999999987   6   6788899999988 999999999987669999999


Q ss_pred             hhcCCcEEEEeccCCCCCcccccHHH-HhhcCCeEEeeecCCCCCCCcHHHHHHHHhC--CCCCCcccceeeechhhHHH
Q 019535          244 CRKGWGKTIVLGVDQPGSQLSLSSFE-VLHSGKILMGSLFGGLKAKSDIPILLKRYMD--KELELDKFVTHEMKFEEINS  320 (339)
Q Consensus       244 l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~--g~l~~~~~i~~~~~l~~~~~  320 (339)
                      ++++ |+++.+|.........++... ++.+++++.++....   +++++++++++.+  |++  .++++++|+|+++++
T Consensus       288 l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~  361 (380)
T 1vj0_A          288 LRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANK  361 (380)
T ss_dssp             EEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHH
T ss_pred             HhcC-CEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHH
Confidence            9997 999999976412145667777 788899999986543   4678999999999  976  567889999999999


Q ss_pred             HHHHHhcCceeEEEEEeC
Q 019535          321 AFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       321 A~~~~~~~~~~kvvl~~~  338 (339)
                      |++.++++...|+||+++
T Consensus       362 A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          362 ALELMESREALKVILYPE  379 (380)
T ss_dssp             HHHHHHHTSCSCEEEECC
T ss_pred             HHHHHhcCCCceEEEEeC
Confidence            999998765449999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.7e-46  Score=340.95  Aligned_cols=286  Identities=26%  Similarity=0.388  Sum_probs=254.7

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+.. .|+.|.+|..+.++.|.....   .+...+|           
T Consensus        52 ~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~G-----------  117 (348)
T 4eez_A           52 NKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN---AGYSVDG-----------  117 (348)
T ss_dssp             CCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-----------
T ss_pred             CCCCcccceeEEEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccccc---cccccCC-----------
Confidence            4789999999999999999999999999999876654 688999999999999987764   5555555           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                              +|+||+.++++.++++|+++++++|+++++++.|||+++ +.++++++++|||+|+|++|.+++|+++.++.
T Consensus       118 --------~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g  188 (348)
T 4eez_A          118 --------GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFG  188 (348)
T ss_dssp             --------SSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSC
T ss_pred             --------cceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCC
Confidence                    999999999999999999999999999999999999965 66789999999999999999999999998754


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+|++++++++++++++++|+++++|+++   .++.+++++++++ ++|++++++++...++.++++++++ |+++.+|.
T Consensus       189 ~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~---~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~  264 (348)
T 4eez_A          189 AKVIAVDINQDKLNLAKKIGADVTINSGD---VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAV  264 (348)
T ss_dssp             CEEEEEESCHHHHHHHHHTTCSEEEEC-C---CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCC
T ss_pred             CEEEEEECcHHHhhhhhhcCCeEEEeCCC---CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEec
Confidence            49999999999999999999999999998   8999999999999 9999999999999899999999997 99999987


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      ..  ....++...++.+++++.++..+.   ++++.++++++.+|++++   ++++|+|+++++||+.+++++.. |+||
T Consensus       265 ~~--~~~~~~~~~~~~~~~~i~gs~~~~---~~~~~~~~~l~~~g~i~p---~~~~~~l~~~~~A~~~l~~g~~~GKvVl  336 (348)
T 4eez_A          265 PN--TEMTLSVPTVVFDGVEVAGSLVGT---RLDLAEAFQFGAEGKVKP---IVATRKLEEINDIIDEMKAGKIEGRMVI  336 (348)
T ss_dssp             CS--CEEEECHHHHHHSCCEEEECCSCC---HHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCCSSEEEE
T ss_pred             cC--CCCccCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHcCCCEE---EEEEEeHHHHHHHHHHHHCCCCccEEEE
Confidence            53  445677788889999999986554   467999999999998864   34899999999999999999876 9999


Q ss_pred             EeCC
Q 019535          336 WMGE  339 (339)
Q Consensus       336 ~~~~  339 (339)
                      +|++
T Consensus       337 ~~sk  340 (348)
T 4eez_A          337 DFTK  340 (348)
T ss_dssp             ECC-
T ss_pred             Eccc
Confidence            9863

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-46  Score=348.17  Aligned_cols=297  Identities=22%  Similarity=0.246  Sum_probs=245.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCcccccccCC
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~   95 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|.+.....   .+|+...+         
T Consensus        59 ~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------  129 (398)
T 1kol_A           59 AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG---------  129 (398)
T ss_dssp             CCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSC---------
T ss_pred             CCCCcccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCC---------
Confidence            357999999999999999999999999999998888899999999999999998653100   01221000         


Q ss_pred             ceeecccccccccceEEeecc--ceEEcCCCCCccc----cccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHH
Q 019535           96 ETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA  169 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~  169 (339)
                            ...|+|+||++++++  .++++|+++++++    ++++++++.|||+++. .++++++++|||+|+|++|++++
T Consensus       130 ------~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~ai  202 (398)
T 1kol_A          130 ------DWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAA  202 (398)
T ss_dssp             ------CBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHH
T ss_pred             ------CCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHH
Confidence                  012499999999987  8999999999888    6888889999999875 78999999999999999999999


Q ss_pred             HHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH--------------
Q 019535          170 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------  234 (339)
Q Consensus       170 ~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~--------------  234 (339)
                      |+|+.+|+++|++++++++++++++++|++ ++++.+  ..++.+.+++++++ ++|+|||++|.+              
T Consensus       203 qlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~  279 (398)
T 1kol_A          203 ASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP  279 (398)
T ss_dssp             HHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCT
T ss_pred             HHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccch
Confidence            999999997899999999999999999997 788765  12378899999887 999999999976              


Q ss_pred             -HHHHHHHHHhhcCCcEEEEeccCCCC-----------CcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCC
Q 019535          235 -SLVQEAYACCRKGWGKTIVLGVDQPG-----------SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       235 -~~~~~~~~~l~~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~  302 (339)
                       ..++.++++++++ |+++.+|.....           ....++...++.|++++.+...   ...+.+.++++++.+|+
T Consensus       280 ~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~  355 (398)
T 1kol_A          280 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDR  355 (398)
T ss_dssp             THHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhcC-CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCC
Confidence             2589999999997 999999865211           1234556667788999887532   12345788999999998


Q ss_pred             CC-CcccceeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535          303 LE-LDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG  338 (339)
Q Consensus       303 l~-~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~  338 (339)
                      ++ +.++++++|+|+++++||+.+.++...|+||+++
T Consensus       356 l~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          356 INIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             CCHHHHHTEEEECGGGHHHHHHHHHHTCSCEEEECTT
T ss_pred             CCCccceeEEEEcHHHHHHHHHHHhCCCceEEEEEeC
Confidence            87 3456789999999999999998876689999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.2e-46  Score=342.51  Aligned_cols=286  Identities=21%  Similarity=0.327  Sum_probs=238.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      .++|.++|||++|+|+++|++|++|++||||++.+. .+|+.|.+|+.+++++|. ...   .++..+...+    .   
T Consensus        56 ~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~~~~~~~----~---  124 (348)
T 3two_A           56 GIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYDCLDSFH----D---  124 (348)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSSSEEGGG----T---
T ss_pred             CCCCeecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccc---cccccccccc----c---
Confidence            478999999999999999999999999999987554 699999999999999998 321   3333220000    0   


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                        .....|+|+||++++++.++++|+++++++||.+++++.|||+++. ..+++++++|||+|+|++|++++|+|+.+|+
T Consensus       125 --~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga  201 (348)
T 3two_A          125 --NEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA  201 (348)
T ss_dssp             --TEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC
T ss_pred             --CCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence              0011249999999999999999999999999999999999999775 4699999999999999999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|++++++++++++++++|+++++ .+.   +.+        ..++|++||++|++..++.++++++++ |+++.+|..
T Consensus       202 -~Vi~~~~~~~~~~~~~~lGa~~v~-~~~---~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  267 (348)
T 3two_A          202 -EVSVFARNEHKKQDALSMGVKHFY-TDP---KQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLP  267 (348)
T ss_dssp             -EEEEECSSSTTHHHHHHTTCSEEE-SSG---GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCC
T ss_pred             -eEEEEeCCHHHHHHHHhcCCCeec-CCH---HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence             999999999999999999999988 322   211        117999999999985599999999997 999999976


Q ss_pred             CCCCccc-ccHHHHh-hcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          258 QPGSQLS-LSSFEVL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       258 ~~~~~~~-~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      .. .... ++...++ .+++++.++..+.   .+++.++++++.+|++++.  + ++|+++++++||+.+.+++.. |+|
T Consensus       268 ~~-~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvV  340 (348)
T 3two_A          268 PV-EVAPVLSVFDFIHLGNRKVYGSLIGG---IKETQEMVDFSIKHNIYPE--I-DLILGKDIDTAYHNLTHGKAKFRYV  340 (348)
T ss_dssp             CG-GGCCEEEHHHHHHTCSCEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEE
T ss_pred             CC-CCcccCCHHHHHhhCCeEEEEEecCC---HHHHHHHHHHHHhCCCCce--E-EEEEHHHHHHHHHHHHcCCCceEEE
Confidence            41 2233 6667777 8899999986544   3578999999999988763  3 899999999999999998875 999


Q ss_pred             EEeCC
Q 019535          335 IWMGE  339 (339)
Q Consensus       335 l~~~~  339 (339)
                      |++++
T Consensus       341 i~~~~  345 (348)
T 3two_A          341 IDMKK  345 (348)
T ss_dssp             EEGGG
T ss_pred             EecCC
Confidence            99863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-45  Score=336.45  Aligned_cols=287  Identities=23%  Similarity=0.359  Sum_probs=249.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|.+|+.+++++|.+...   .|+..+|           
T Consensus        58 ~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-----------  123 (347)
T 2hcy_A           58 VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYTHDG-----------  123 (347)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTTBCC-----------
T ss_pred             CCCCcccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccCCCC-----------
Confidence            4689999999999999999999999999999876644 699999999999999987653   4544445           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                              +|+||++++++.++++|+++++++|+++++++.|||+++.. .+++++++|||+|+ |++|++++|+++..|
T Consensus       124 --------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G  194 (347)
T 2hcy_A          124 --------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMG  194 (347)
T ss_dssp             --------SSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             --------cceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCC
Confidence                    99999999999999999999999999999999999997754 58999999999998 899999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|+++++++++.+.++++|++.++|..+  .+++.+.+++.+.+++|++||++|....++.++++++++ |+++.+|.
T Consensus       195 a-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~  270 (347)
T 2hcy_A          195 Y-RVLGIDGGEGKEELFRSIGGEVFIDFTK--EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGM  270 (347)
T ss_dssp             C-EEEEEECSTTHHHHHHHTTCCEEEETTT--CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCC
T ss_pred             C-cEEEEcCCHHHHHHHHHcCCceEEecCc--cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeC
Confidence            9 9999999999999999999998998763  267888888877668999999999977799999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI  335 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl  335 (339)
                      .. .....++...++.+++++.++....   .++++++++++.+|++++.   +++|+++++++||+.+++++.. |+||
T Consensus       271 ~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv  343 (347)
T 2hcy_A          271 PA-GAKCCSDVFNQVVKSISIVGSYVGN---RADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVV  343 (347)
T ss_dssp             CT-TCEEEEEHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEE
T ss_pred             CC-CCCCCCCHHHHhhCCcEEEEccCCC---HHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEE
Confidence            64 2345677777888999999875432   3578999999999988753   4799999999999999888754 9999


Q ss_pred             EeCC
Q 019535          336 WMGE  339 (339)
Q Consensus       336 ~~~~  339 (339)
                      ++++
T Consensus       344 ~~~~  347 (347)
T 2hcy_A          344 DTSK  347 (347)
T ss_dssp             ESCC
T ss_pred             ecCC
Confidence            9864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.4e-45  Score=338.01  Aligned_cols=283  Identities=27%  Similarity=0.360  Sum_probs=249.4

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|            
T Consensus        60 ~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G------------  124 (347)
T 1jvb_A           60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG------------  124 (347)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC------------
T ss_pred             CCCCccccccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCCC------------
Confidence            4689999999999999999999999999999888888999999999999999987653   4554444            


Q ss_pred             ecccccccccceEEeec-cceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccC-HHHHHHHHHHHHc-
Q 019535           99 HHFVSVSSFSEYTVLDI-AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLG-SIGLAVAEGARLC-  175 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~-~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G-~iG~~a~~la~~~-  175 (339)
                             +|+||+++|+ +.++++ +++++++|+.+++++.|||+++. .++++++++|||+|+| ++|++++|+++.. 
T Consensus       125 -------~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~  195 (347)
T 1jvb_A          125 -------AYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVS  195 (347)
T ss_dssp             -------SSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHT
T ss_pred             -------cceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcC
Confidence                   9999999999 999999 99999999999999999999874 5889999999999985 9999999999999 


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++++++++.+.++++|++.++++.+   .++.+.+.+++. +++|++||++|.+..++.++++++++ |+++.+
T Consensus       196 Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~  270 (347)
T 1jvb_A          196 GA-TIIGVDVREEAVEAAKRAGADYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMV  270 (347)
T ss_dssp             CC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEEC
T ss_pred             CC-eEEEEcCCHHHHHHHHHhCCCEEecCCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEE
Confidence            99 8999999999999999999999999887   788888888887 58999999999986699999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      |.... .. .++...++.+++++.++....   +++++++++++.+|+++  ++++++|+++++++|++.+++++.. |+
T Consensus       271 g~~~~-~~-~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKv  343 (347)
T 1jvb_A          271 GLFGA-DL-HYHAPLITLSEIQFVGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQ  343 (347)
T ss_dssp             CSSCC-CC-CCCHHHHHHHTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEE
T ss_pred             CCCCC-CC-CCCHHHHHhCceEEEEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceE
Confidence            97641 22 566667788899999876432   45789999999999775  4588999999999999999988765 99


Q ss_pred             EEEe
Q 019535          334 VIWM  337 (339)
Q Consensus       334 vl~~  337 (339)
                      ||++
T Consensus       344 vl~~  347 (347)
T 1jvb_A          344 VLIP  347 (347)
T ss_dssp             EEEC
T ss_pred             EecC
Confidence            9874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.2e-45  Score=338.04  Aligned_cols=279  Identities=25%  Similarity=0.377  Sum_probs=227.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|+.+++++|.+...   +|+..+|            
T Consensus        57 ~~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G------------  120 (344)
T 2h6e_A           57 FRLPIILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQTTNG------------  120 (344)
T ss_dssp             CCSSEECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTTBCC------------
T ss_pred             CCCCccccccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccccCC------------
Confidence            468999999999999999999 999999999888888999999999999999987643   5554445            


Q ss_pred             ecccccccccceEEee-ccceEEcCCCCCccccccccchhhhhhHHHHHh----cCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLD-IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT----ANVEVGSTVVIFGLGSIGLAVAEGAR  173 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~----~~~~~~~~VLI~G~G~iG~~a~~la~  173 (339)
                             +|+||++++ ++.++++ +++++++|+.+++++.|||+++...    .++ ++++|||+|+|++|++++|+|+
T Consensus       121 -------~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak  191 (344)
T 2h6e_A          121 -------GFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILK  191 (344)
T ss_dssp             -------SSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHH
T ss_pred             -------cceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHH
Confidence                   999999999 9999999 9999999999999999999987665    288 9999999999999999999999


Q ss_pred             Hc--CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          174 LC--GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       174 ~~--G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      .+  |+ +|++++++++++++++++|+++++++++   .  .+.+++++++ ++|+|||++|.+..++.++++++++ |+
T Consensus       192 ~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~  264 (344)
T 2h6e_A          192 ALMKNI-TIVGISRSKKHRDFALELGADYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GA  264 (344)
T ss_dssp             HHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EE
T ss_pred             HhcCCC-EEEEEeCCHHHHHHHHHhCCCEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CE
Confidence            99  99 8999999999999999999999987543   1  2334556656 8999999999986699999999997 99


Q ss_pred             EEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       251 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      ++.+|....  ...++...++.|++++.++....   .++++++++++.+|++++.  + ++|+++++++||+.++++..
T Consensus       265 iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~  336 (344)
T 2h6e_A          265 IILVGMEGK--RVSLEAFDTAVWNKKLLGSNYGS---LNDLEDVVRLSESGKIKPY--I-IKVPLDDINKAFTNLDEGRV  336 (344)
T ss_dssp             EEECCCCSS--CCCCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCC--E-EEECC---------------
T ss_pred             EEEeCCCCC--CcccCHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHcCCCCcc--e-EEEeHHHHHHHHHHHHcCCC
Confidence            999997542  34567777888899999875432   4578999999999987644  6 99999999999999988876


Q ss_pred             e-EEEEEe
Q 019535          331 L-RCVIWM  337 (339)
Q Consensus       331 ~-kvvl~~  337 (339)
                      . |+||++
T Consensus       337 ~gKvvl~~  344 (344)
T 2h6e_A          337 DGRQVITP  344 (344)
T ss_dssp             -CEEEECC
T ss_pred             ceEEEEeC
Confidence            4 999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=7.6e-45  Score=335.07  Aligned_cols=282  Identities=23%  Similarity=0.261  Sum_probs=244.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS-PWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~-~g~~~~g~~~~~~~~~~   96 (339)
                      ..++|.++|||++|+|+++|++|++|++||||+..+..      .|+.+. +.|........ +|...+|          
T Consensus        80 ~~~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G----------  142 (363)
T 3uog_A           80 DLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPG----------  142 (363)
T ss_dssp             CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCC----------
T ss_pred             CCCCCcCcccceEEEEEEECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCC----------
Confidence            45789999999999999999999999999999877643      567777 88864221101 3444444          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                               +|+||++++++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+..|
T Consensus       143 ---------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~G  213 (363)
T 3uog_A          143 ---------VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATG  213 (363)
T ss_dssp             ---------CCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTT
T ss_pred             ---------cceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                     99999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|++++++++++++++++|++++++...   +++.+.+++++++ ++|++|||+|... ++.++++++++ |+++.+|
T Consensus       214 a-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G  287 (363)
T 3uog_A          214 A-EVIVTSSSREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPD-GRISVIG  287 (363)
T ss_dssp             C-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEE-EEEEEEC
T ss_pred             C-EEEEEecCchhHHHHHHcCCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcC-CEEEEEe
Confidence            9 9999999999999999999999999655   7899999999988 9999999999766 99999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI  335 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl  335 (339)
                      .... ....++...++.+++++.++....   +++++++++++.++++  +++++++|+++++++||+.++++...|+||
T Consensus       288 ~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi  361 (363)
T 3uog_A          288 VLEG-FEVSGPVGPLLLKSPVVQGISVGH---RRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVI  361 (363)
T ss_dssp             CCSS-CEECCBTTHHHHTCCEEEECCCCC---HHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEE
T ss_pred             cCCC-cccCcCHHHHHhCCcEEEEEecCC---HHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEE
Confidence            7643 335667777888999999986543   4678999999999976  456889999999999999999888449999


Q ss_pred             Ee
Q 019535          336 WM  337 (339)
Q Consensus       336 ~~  337 (339)
                      ++
T Consensus       362 ~~  363 (363)
T 3uog_A          362 EF  363 (363)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-45  Score=340.95  Aligned_cols=285  Identities=21%  Similarity=0.351  Sum_probs=237.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCC--CCCC---CCCCCCCcccccc
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFP--FKIS---PWMPRDQTSRFKD   92 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~--~~~~---~g~~~~g~~~~~~   92 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+. ..|+.|.+|+.+++++|.+..  +...   .|...+       
T Consensus        74 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~-------  146 (369)
T 1uuf_A           74 TVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL-------  146 (369)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCC-------
T ss_pred             CCCCeecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCC-------
Confidence            368999999999999999999999999999988765 479999999999999998652  1000   021222       


Q ss_pred             cCCceeecccccccccceEEeeccceEEcCCC-CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHH
Q 019535           93 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT-VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG  171 (339)
Q Consensus        93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~-~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~l  171 (339)
                                  |+|+||+++|++.++++|++ +++++||.+++++.|||+++.+ ++++++++|||+|+|++|++++|+
T Consensus       147 ------------G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiql  213 (369)
T 1uuf_A          147 ------------GGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKL  213 (369)
T ss_dssp             ------------CSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHH
T ss_pred             ------------CcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHH
Confidence                        49999999999999999999 9999999999999999998765 689999999999999999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      |+.+|+ +|++++++++++++++++|+++++++.+   .++.+   ++. +++|++||++|.+..++.++++++++ |++
T Consensus       214 ak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~i  284 (369)
T 1uuf_A          214 AHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN---ADEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTM  284 (369)
T ss_dssp             HHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC---HHHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEE
T ss_pred             HHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc---HHHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEE
Confidence            999999 8999999999999999999999999876   54433   333 48999999999875588999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      +.+|..... ...++...++.+++++.++....   .+++.++++++.+|++++.  + ++|+++++++|++.++++...
T Consensus       285 v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~  357 (369)
T 1uuf_A          285 TLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVK  357 (369)
T ss_dssp             EECCCC--------CHHHHHTTTCEEEECCSCC---HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSS
T ss_pred             EEeccCCCC-ccccCHHHHHhCCcEEEEeecCC---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCc
Confidence            999975322 11456667788899999886443   3578999999999987654  4 679999999999999888755


Q ss_pred             -EEEEEeCC
Q 019535          332 -RCVIWMGE  339 (339)
Q Consensus       332 -kvvl~~~~  339 (339)
                       |+||.+++
T Consensus       358 gKvvi~~~~  366 (369)
T 1uuf_A          358 YRFVIDNRT  366 (369)
T ss_dssp             SEEEEEGGG
T ss_pred             eEEEEecCC
Confidence             99998753

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=4e-46  Score=343.31  Aligned_cols=280  Identities=21%  Similarity=0.298  Sum_probs=239.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCC-CcCCCCEEeec-cCCCCCCCccccCCCCCCCCCC-CCCCCC------CCCCCCccc
Q 019535           19 AVFPRILGHEAIGVVESVGENVD-GVVEGDVVIPH-FLADCTECVGCRSKKGNLCSAF-PFKISP------WMPRDQTSR   89 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~-~~~~~~~~~~c~~~~~~~c~~~-~~~~~~------g~~~~g~~~   89 (339)
                      .++|.++|||++|+|+++|++|+ +|++||||++. +..+|+.|.+|+.+++++|.+. ..   +      |...+    
T Consensus        60 ~~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---~~~~~~~g~~~~----  132 (360)
T 1piw_A           60 MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTT---YSQPYEDGYVSQ----  132 (360)
T ss_dssp             CCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEES---SSCBCTTSCBCC----
T ss_pred             CCCCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhc---cccccCCCccCC----
Confidence            46899999999999999999999 99999999654 3468999999999999999865 11   2      32223    


Q ss_pred             ccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHH
Q 019535           90 FKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA  169 (339)
Q Consensus        90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~  169 (339)
                                     |+|+||++++++.++++|+++++++||.+++++.|||+++.. ++++++++|||+|+|++|++++
T Consensus       133 ---------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~  196 (360)
T 1piw_A          133 ---------------GGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGT  196 (360)
T ss_dssp             ---------------CSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHH
T ss_pred             ---------------CcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHH
Confidence                           399999999999999999999999999999999999998765 8899999999999999999999


Q ss_pred             HHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCc-cHHHHHHHhcCCCccEEEEcCCC--HHHHHHHHHHhhc
Q 019535          170 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGL--ASLVQEAYACCRK  246 (339)
Q Consensus       170 ~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-~~~~~l~~~~~g~~d~v~d~~g~--~~~~~~~~~~l~~  246 (339)
                      |+|+.+|+ +|++++++++++++++++|+++++++++   . ++.+.+.    +++|++||++|.  +..++.+++++++
T Consensus       197 qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~  268 (360)
T 1piw_A          197 LISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE---EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKV  268 (360)
T ss_dssp             HHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG---TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEE
T ss_pred             HHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcC---chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcC
Confidence            99999999 8999999999999999999999999876   5 5555443    489999999998  5558899999999


Q ss_pred             CCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhh--HHHHHHH
Q 019535          247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE--INSAFDL  324 (339)
Q Consensus       247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~--~~~A~~~  324 (339)
                      + |+++.+|.... . ..++...++.+++++.++....   .++++++++++.+|++++.  + ++|++++  +++||+.
T Consensus       269 ~-G~iv~~g~~~~-~-~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~  339 (360)
T 1piw_A          269 G-GRIVSISIPEQ-H-EMLSLKPYGLKAVSISYSALGS---IKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFER  339 (360)
T ss_dssp             E-EEEEECCCCCS-S-CCEEECGGGCBSCEEEECCCCC---HHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHH
T ss_pred             C-CEEEEecCCCC-c-cccCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHH
Confidence            7 99999997643 1 1455556778899999875432   3578999999999987654  6 8999999  9999999


Q ss_pred             HhcCcee-EEEEEeC
Q 019535          325 LIKGKCL-RCVIWMG  338 (339)
Q Consensus       325 ~~~~~~~-kvvl~~~  338 (339)
                      ++++... |+||+++
T Consensus       340 ~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          340 MEKGDVRYRFTLVGY  354 (360)
T ss_dssp             HHHTCCSSEEEEECC
T ss_pred             HHCCCCceEEEEecC
Confidence            9888765 9999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3e-46  Score=343.73  Aligned_cols=277  Identities=18%  Similarity=0.218  Sum_probs=239.4

Q ss_pred             CcccCCceeEEEEEecCCCCCcCCCCEEeeccCCC--CCCCccccCCCCCCCCCCCCCCCC--CC-CCCCcccccccCCc
Q 019535           22 PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD--CTECVGCRSKKGNLCSAFPFKISP--WM-PRDQTSRFKDLRGE   96 (339)
Q Consensus        22 P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~--~~~~~~c~~~~~~~c~~~~~~~~~--g~-~~~g~~~~~~~~~~   96 (339)
                      |.++|||++| |+++|++ ++|++||||+..+..+  |+.|.+|+.+++++|.+..+   +  |+ ..+|          
T Consensus        58 p~v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~G----------  122 (357)
T 2b5w_A           58 HLVLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMY---FERGIVGAHG----------  122 (357)
T ss_dssp             EEECCSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSC---EEETTBEECC----------
T ss_pred             CcccCceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcc---cccCccCCCc----------
Confidence            9999999999 9999999 9999999999988777  99999999999999987653   3  43 2233          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCC------CEEEEEccCHHHHHH-H
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVG------STVVIFGLGSIGLAV-A  169 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~------~~VLI~G~G~iG~~a-~  169 (339)
                               +|+||++++++.++++|++++ ++| +++.+++|||+++ +.++++++      ++|||+|+|++|+++ +
T Consensus       123 ---------~~aey~~v~~~~~~~iP~~~~-~~a-al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~i  190 (357)
T 2b5w_A          123 ---------YMSEFFTSPEKYLVRIPRSQA-ELG-FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLA  190 (357)
T ss_dssp             ---------SCBSEEEEEGGGEEECCGGGS-TTG-GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHH
T ss_pred             ---------ceeeEEEEchHHeEECCCCcc-hhh-hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHH
Confidence                     999999999999999999999 654 5677999999987 67889999      999999999999999 9


Q ss_pred             HHH-HHcCCCEEEEEcCChh---HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhh
Q 019535          170 EGA-RLCGATRIIGVDVISE---KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR  245 (339)
Q Consensus       170 ~la-~~~G~~~Vi~~~~~~~---~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~  245 (339)
                      |+| +.+|+++|++++++++   ++++++++|++++ ++++   +++.+ ++++ .+++|+|||++|.+..++.++++++
T Consensus       191 qla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~---~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~  264 (357)
T 2b5w_A          191 MLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ---TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALA  264 (357)
T ss_dssp             HHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT---SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEE
T ss_pred             HHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc---cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHh
Confidence            999 9999955999999998   9999999999999 8877   67777 7777 5599999999999866999999999


Q ss_pred             cCCcEEEEeccCCCCCcccccHHHH----hhcCCeEEeeecCCCCCCCcHHHHHHHHhCC--CCCCcccceeeechhhHH
Q 019535          246 KGWGKTIVLGVDQPGSQLSLSSFEV----LHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEIN  319 (339)
Q Consensus       246 ~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g--~l~~~~~i~~~~~l~~~~  319 (339)
                      ++ |+++.+|.... ....++...+    +.+++++.++....   .++++++++++.+|  ++ +.++++++|++++++
T Consensus       265 ~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~  338 (357)
T 2b5w_A          265 PN-GVGALLGVPSD-WAFEVDAGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFE  338 (357)
T ss_dssp             EE-EEEEECCCCCC-CCCCCCHHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGG
T ss_pred             cC-CEEEEEeCCCC-CCceecHHHHhHHHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHH
Confidence            97 99999997642 3445666666    78899999876443   46789999999999  76 677788999999999


Q ss_pred             HHHHHHhcCceeEEEEEeCC
Q 019535          320 SAFDLLIKGKCLRCVIWMGE  339 (339)
Q Consensus       320 ~A~~~~~~~~~~kvvl~~~~  339 (339)
                      +|++.+  +...|+||++++
T Consensus       339 ~A~~~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          339 AAFDDD--DTTIKTAIEFST  356 (357)
T ss_dssp             GGGCCS--TTCCEEEEECCC
T ss_pred             HHHHHh--CCCceEEEEecC
Confidence            999988  445699999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=3.3e-44  Score=330.12  Aligned_cols=288  Identities=22%  Similarity=0.324  Sum_probs=237.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|.+|+.+++++|....+. ..+....|           
T Consensus        61 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~~~g-----------  128 (357)
T 2cf5_A           61 SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS-YNDVYING-----------  128 (357)
T ss_dssp             CCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCTTS-----------
T ss_pred             CCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccc-ccccccCC-----------
Confidence            468999999999999999999999999999987554 58999999999999999644311 00000001           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCC-CCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~-~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                         ....|+|+||+++|++.++++|+++++++||.+++++.|||+++. ..+++ ++++|||+|+|++|++++|+|+.+|
T Consensus       129 ---~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G  204 (357)
T 2cf5_A          129 ---QPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMG  204 (357)
T ss_dssp             ---CBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHT
T ss_pred             ---CCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence               011249999999999999999999999999999999999999765 46788 9999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+++++++++++.++ ++|+++++++++   .   +.+++.+ +++|++||++|.+..++.++++++++ |+++.+|
T Consensus       205 a-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G  275 (357)
T 2cf5_A          205 H-HVTVISSSNKKREEALQDLGADDYVIGSD---Q---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMG  275 (357)
T ss_dssp             C-EEEEEESSTTHHHHHHTTSCCSCEEETTC---H---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECS
T ss_pred             C-eEEEEeCChHHHHHHHHHcCCceeecccc---H---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeC
Confidence            9 9999999999999887 899999998765   3   3455554 37999999999875588999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      ...... ..++.. ++.|++++.++....   .++++++++++.+|++++.  + ++|+++++++||+.++++... |+|
T Consensus       276 ~~~~~~-~~~~~~-~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvv  347 (357)
T 2cf5_A          276 VINNPL-QFLTPL-LMLGRKVITGSFIGS---MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFV  347 (357)
T ss_dssp             CCSSCC-CCCHHH-HHHHTCEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEE
T ss_pred             CCCCCc-cccCHH-HHhCccEEEEEccCC---HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEE
Confidence            754221 114555 778899999886432   3578999999999988754  4 799999999999999888765 999


Q ss_pred             EEeCC
Q 019535          335 IWMGE  339 (339)
Q Consensus       335 l~~~~  339 (339)
                      |++++
T Consensus       348 i~~~~  352 (357)
T 2cf5_A          348 VDVEG  352 (357)
T ss_dssp             EETTS
T ss_pred             EeCCc
Confidence            98753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=9.4e-44  Score=336.63  Aligned_cols=287  Identities=16%  Similarity=0.195  Sum_probs=245.6

Q ss_pred             CCCCC-cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      +..+| .++|||++|+|+++|++|++|++||||++.+...|+.|++|. +.++.|.....   +|+..+.          
T Consensus       105 ~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~-~~~~~c~~~~~---~G~~~~~----------  170 (447)
T 4a0s_A          105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATH-GDGMLGTEQRA---WGFETNF----------  170 (447)
T ss_dssp             GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGG-TCTTCSTTCEE---TTTTSSS----------
T ss_pred             ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccc-ccccccccccc---ccccCCC----------
Confidence            34678 799999999999999999999999999998888888777555 77899987764   6655421          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VLI~G~-G~iG~~a~~la~  173 (339)
                              |+|+||++++++.++++|+++++++||++++++.|||+++..  .++++++++|||+|+ |++|++++|+|+
T Consensus       171 --------G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~  242 (447)
T 4a0s_A          171 --------GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVK  242 (447)
T ss_dssp             --------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHH
T ss_pred             --------CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence                    399999999999999999999999999999999999998764  388999999999997 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc------------------HHHHHHHhcCCCccEEEEcCCCHH
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS------------------VSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~------------------~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      ..|+ +|++++++++++++++++|++.++++.+   .+                  +.+.+++.+++++|++||++|...
T Consensus       243 ~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~  318 (447)
T 4a0s_A          243 NGGG-IPVAVVSSAQKEAAVRALGCDLVINRAE---LGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT  318 (447)
T ss_dssp             HTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHH---HTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH
T ss_pred             HcCC-EEEEEeCCHHHHHHHHhcCCCEEEeccc---ccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH
Confidence            9999 8999999999999999999999998755   32                  267788888449999999999865


Q ss_pred             HHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeech
Q 019535          236 LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF  315 (339)
Q Consensus       236 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l  315 (339)
                       ++.++++++++ |+++.+|... .....++...++.+++++.++....   .+++.++++++.+|+++  ++++++|++
T Consensus       319 -~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l  390 (447)
T 4a0s_A          319 -FGLSVIVARRG-GTVVTCGSSS-GYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSAVYPL  390 (447)
T ss_dssp             -HHHHHHHSCTT-CEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEG
T ss_pred             -HHHHHHHHhcC-CEEEEEecCC-CcccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeEEEcH
Confidence             89999999997 9999999764 3345567777888899999886443   25678899999999775  468899999


Q ss_pred             hhHHHHHHHHhcCcee-EEEEEeC
Q 019535          316 EEINSAFDLLIKGKCL-RCVIWMG  338 (339)
Q Consensus       316 ~~~~~A~~~~~~~~~~-kvvl~~~  338 (339)
                      +++++||+.+.++... |++|.+.
T Consensus       391 ~~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          391 AEAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEESS
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeC
Confidence            9999999999888776 9998863

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=5.3e-44  Score=338.85  Aligned_cols=290  Identities=19%  Similarity=0.198  Sum_probs=248.4

Q ss_pred             CCCCC-cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      +.++| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..+.+++|.+...   +|+...           
T Consensus       113 ~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~-----------  177 (456)
T 3krt_A          113 RHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETN-----------  177 (456)
T ss_dssp             TTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSS-----------
T ss_pred             cCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCC-----------
Confidence            34688 69999999999999999999999999988654 688899999999999987764   565532           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh--cCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~~~~VLI~G~-G~iG~~a~~la~  173 (339)
                             .|+|+||++++++.++++|+++++++||++++++.|||+++...  ++++++++|||+|+ |++|++++|+|+
T Consensus       178 -------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak  250 (456)
T 3krt_A          178 -------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFAL  250 (456)
T ss_dssp             -------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHH
T ss_pred             -------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence                   13999999999999999999999999999999999999987654  78999999999998 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCC--------------ccHHHHHHHhcCC-CccEEEEcCCCHHHHH
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD--------------KSVSQIIIDMTDG-GADYCFECVGLASLVQ  238 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~--------------~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~  238 (339)
                      ..|+ +|++++++++++++++++|++.++++.+...              ..+.+.+++++++ ++|+||||+|+.. ++
T Consensus       251 ~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~-~~  328 (456)
T 3krt_A          251 AGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET-FG  328 (456)
T ss_dssp             HTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHH-HH
T ss_pred             HcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchh-HH
Confidence            9999 8999989999999999999999999877111              1234788888887 9999999999954 99


Q ss_pred             HHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          239 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       239 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      .++++++++ |+++.+|... .....++...++.+++++.++.....   +++.++++++.+|+++  ++++++|+|+++
T Consensus       329 ~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~  401 (456)
T 3krt_A          329 ASVFVTRKG-GTITTCASTS-GYMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYSLEDT  401 (456)
T ss_dssp             HHHHHEEEE-EEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGH
T ss_pred             HHHHHhhCC-cEEEEEecCC-CcccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHH
Confidence            999999997 9999999764 33456677778888999998865443   4677899999999775  468899999999


Q ss_pred             HHHHHHHhcCcee-EEEEEeC
Q 019535          319 NSAFDLLIKGKCL-RCVIWMG  338 (339)
Q Consensus       319 ~~A~~~~~~~~~~-kvvl~~~  338 (339)
                      ++|++.+.++... |+||.+.
T Consensus       402 ~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          402 GQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             HHHHHHHHTTCSSSEEEEESS
T ss_pred             HHHHHHHHhCCCCCcEEEEeC
Confidence            9999999888776 9998763

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.2e-43  Score=327.43  Aligned_cols=287  Identities=23%  Similarity=0.382  Sum_probs=238.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|.+|+.+++++|....+. ..+....|           
T Consensus        68 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~~~g-----------  135 (366)
T 1yqd_A           68 SMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIYHDG-----------  135 (366)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEES-SSSBCTTS-----------
T ss_pred             CCCCEecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCccccc-ccccccCC-----------
Confidence            468999999999999999999999999999987554 58999999999999999654321 00100001           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCC-CCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~-~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                         ....|+|+||++++++.++++|+++++++||.+++++.|||+++.. .+++ ++++|||+|+|++|++++|+|+.+|
T Consensus       136 ---~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G  211 (366)
T 1yqd_A          136 ---TITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGLGGLGHVAVKFAKAFG  211 (366)
T ss_dssp             ---CBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             ---CcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence               0112499999999999999999999999999999999999997654 6787 9999999999999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+++++++++++.++ ++|+++++++.+   .   +.+++.+ +++|+|||++|....++.++++++++ |+++.+|
T Consensus       212 a-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g  282 (366)
T 1yqd_A          212 S-KVTVISTSPSKKEEALKNFGADSFLVSRD---Q---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVG  282 (366)
T ss_dssp             C-EEEEEESCGGGHHHHHHTSCCSEEEETTC---H---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECC
T ss_pred             C-EEEEEeCCHHHHHHHHHhcCCceEEeccC---H---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEc
Confidence            9 9999999999998877 899999998776   3   3455554 37999999999875588999999997 9999999


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      ...  ....++...++.+++++.++....   .+++.++++++.+|++++.  + ++|+|+++++||+.++++... |+|
T Consensus       283 ~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvv  354 (366)
T 1yqd_A          283 APE--KPLELPAFSLIAGRKIVAGSGIGG---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFV  354 (366)
T ss_dssp             CCS--SCEEECHHHHHTTTCEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEE
T ss_pred             cCC--CCCCcCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEE
Confidence            754  234567777888899999876433   3578999999999988764  4 799999999999999988765 999


Q ss_pred             EEeC
Q 019535          335 IWMG  338 (339)
Q Consensus       335 l~~~  338 (339)
                      |.++
T Consensus       355 l~~~  358 (366)
T 1yqd_A          355 IDVG  358 (366)
T ss_dssp             ECHH
T ss_pred             EEcc
Confidence            9764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.9e-42  Score=316.56  Aligned_cols=275  Identities=20%  Similarity=0.209  Sum_probs=226.7

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      .+.+|.++|||++|+|+++|++|++|++||||.       +.|..|..+               ...+|           
T Consensus        59 ~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~-------~~~~~~~~~---------------~~~~G-----------  105 (371)
T 3gqv_A           59 FATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVY-------GAQNEMCPR---------------TPDQG-----------  105 (371)
T ss_dssp             -CCTTSCCCSEEEEEEEEECTTCCSCCTTCEEE-------EECCTTCTT---------------CTTCC-----------
T ss_pred             CCCCCccCccccEEEEEEeCCCCCCCCCCCEEE-------EeccCCCCC---------------CCCCC-----------
Confidence            346799999999999999999999999999994       445555422               12233           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh-cCC-----------CCCCEEEEEcc-CHH
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANV-----------EVGSTVVIFGL-GSI  164 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~-~~~-----------~~~~~VLI~G~-G~i  164 (339)
                              +|+||++++++.++++|+++++++|+++++++.|||+++.+. .++           +++++|||+|+ |++
T Consensus       106 --------~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~v  177 (371)
T 3gqv_A          106 --------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTAT  177 (371)
T ss_dssp             --------SSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHH
T ss_pred             --------cCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHH
Confidence                    999999999999999999999999999999999999998777 553           89999999998 899


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHh
Q 019535          165 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC  244 (339)
Q Consensus       165 G~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l  244 (339)
                      |++++|+|+..|+ +|+++. +++++++++++|+++++|+++   .++.+.+++++++++|++|||+|++..++.+++++
T Consensus       178 G~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l  252 (371)
T 3gqv_A          178 ATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRA---PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAI  252 (371)
T ss_dssp             HHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS---TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHS
T ss_pred             HHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCC---chHHHHHHHHccCCccEEEECCCchHHHHHHHHHh
Confidence            9999999999999 899987 789999999999999999988   88999999999889999999999987799999999


Q ss_pred             -hcCCcEEEEeccCCC----CCccccc---HHHHhhcCCeEEeeecCCCCC------CCcHHHHHHHHhCCCCCCcccce
Q 019535          245 -RKGWGKTIVLGVDQP----GSQLSLS---SFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVT  310 (339)
Q Consensus       245 -~~~~G~~v~~g~~~~----~~~~~~~---~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~l~~g~l~~~~~i~  310 (339)
                       +++ |+++.+|....    .......   ...++.|++++.++.......      .+.+.++++++.+|++++..+++
T Consensus       253 ~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  331 (371)
T 3gqv_A          253 GRAG-GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRV  331 (371)
T ss_dssp             CTTC-EEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEE
T ss_pred             hcCC-CEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCee
Confidence             587 99999996532    1112211   234666788887764322111      01234788999999999998888


Q ss_pred             eeechhhHHHHHHHHhcCce-e-EEEEEeCC
Q 019535          311 HEMKFEEINSAFDLLIKGKC-L-RCVIWMGE  339 (339)
Q Consensus       311 ~~~~l~~~~~A~~~~~~~~~-~-kvvl~~~~  339 (339)
                      +.|+++++++||+.+.+++. . |+|+.+++
T Consensus       332 ~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          332 VQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             EEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             cCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            88999999999999998865 3 88888754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2e-43  Score=325.99  Aligned_cols=277  Identities=18%  Similarity=0.238  Sum_probs=234.6

Q ss_pred             CcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCC--CCC-CCCcccccccCCcee
Q 019535           22 PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP--WMP-RDQTSRFKDLRGETI   98 (339)
Q Consensus        22 P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~--g~~-~~g~~~~~~~~~~~~   98 (339)
                      |.++|||++|+|++  ++ ++|++||||++.+..+|+.|.+|+.+++++|.+...   +  |+. .+|            
T Consensus        61 p~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~G------------  122 (366)
T 2cdc_A           61 FLVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF---GEAGIHKMDG------------  122 (366)
T ss_dssp             CEECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCC---EEETTBEECC------------
T ss_pred             CCcCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCc---ccCCccCCCC------------
Confidence            99999999999999  67 899999999999989999999999999999986542   2  332 233            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--H--hcCCC--C-------CCEEEEEccCHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--R--TANVE--V-------GSTVVIFGLGSIG  165 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~--~~~~~--~-------~~~VLI~G~G~iG  165 (339)
                             +|+||++++++.++++|++++ ++|+ ++.++.|||+++.  +  .++++  +       +++|||+|+|++|
T Consensus       123 -------~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG  193 (366)
T 2cdc_A          123 -------FMREWWYDDPKYLVKIPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIG  193 (366)
T ss_dssp             -------SCBSEEEECGGGEEEECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHH
T ss_pred             -------ceeEEEEechHHeEECcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHH
Confidence                   999999999999999999999 7775 5679999999886  4  77888  8       9999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCCh---hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHH-HHHH
Q 019535          166 LAVAEGARLCGATRIIGVDVIS---EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLV-QEAY  241 (339)
Q Consensus       166 ~~a~~la~~~G~~~Vi~~~~~~---~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~-~~~~  241 (339)
                      ++++|+|+..|+ +|+++++++   ++.++++++|++.+ + .+    ++.+.+.+ +.+++|++||++|.+..+ +.++
T Consensus       194 ~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~  265 (366)
T 2cdc_A          194 VLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS----NGYDKLKD-SVGKFDVIIDATGADVNILGNVI  265 (366)
T ss_dssp             HHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHG
T ss_pred             HHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH----HHHHHHHH-hCCCCCEEEECCCChHHHHHHHH
Confidence            999999999999 999999998   89999999999888 7 43    45556666 446899999999987658 9999


Q ss_pred             HHhhcCCcEEEEeccCCCCCcccccHHH---HhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCC----Ccccceeeec
Q 019535          242 ACCRKGWGKTIVLGVDQPGSQLSLSSFE---VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE----LDKFVTHEMK  314 (339)
Q Consensus       242 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~----~~~~i~~~~~  314 (339)
                      ++++++ |+++.+|.... ....++...   ++.+++++.++...   ..++++++++++.+|+++    +.++++++|+
T Consensus       266 ~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~  340 (366)
T 2cdc_A          266 PLLGRN-GVLGLFGFSTS-GSVPLDYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAAKMLITKTVS  340 (366)
T ss_dssp             GGEEEE-EEEEECSCCCS-CEEEEEHHHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEE
T ss_pred             HHHhcC-CEEEEEecCCC-CccccChhhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcCCCCcccchhhcEEEEEc
Confidence            999997 99999997643 225566666   78889999987543   246789999999999876    6777889999


Q ss_pred             hhhHHHHHHH--HhcCceeEEEEEeC
Q 019535          315 FEEINSAFDL--LIKGKCLRCVIWMG  338 (339)
Q Consensus       315 l~~~~~A~~~--~~~~~~~kvvl~~~  338 (339)
                      ++++++||+.  ++.+...|+||+++
T Consensus       341 l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          341 INDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             TTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             HHHHHHHHHHHhhhcCCceEEEEecC
Confidence            9999999999  55444459999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.7e-42  Score=315.98  Aligned_cols=263  Identities=20%  Similarity=0.255  Sum_probs=229.5

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|+++|++|++|++||||+...                              .+            
T Consensus        82 ~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~------------------------------~~------------  119 (353)
T 4dup_A           82 PKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLA------------------------------NG------------  119 (353)
T ss_dssp             CTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEEC------------------------------SS------------
T ss_pred             CCCCCCccccccEEEEEEECCCCCCCCCCCEEEEec------------------------------CC------------
Confidence            346899999999999999999999999999996431                              22            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~~~G  176 (339)
                             |+|+||++++++.++++|+++++++||+++++++|||+++.+.++++++++|||+| +|++|++++|+|+..|
T Consensus       120 -------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G  192 (353)
T 4dup_A          120 -------GAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFG  192 (353)
T ss_dssp             -------CCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             -------CceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence                   39999999999999999999999999999999999999988889999999999995 5999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|++++++++++++++++|++.++++++   .++.+.+++.+++++|++|||+|++. ++.++++++++ |+++.+|.
T Consensus       193 a-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~  266 (353)
T 4dup_A          193 A-EVYATAGSTGKCEACERLGAKRGINYRS---EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAF  266 (353)
T ss_dssp             C-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCC
T ss_pred             C-EEEEEeCCHHHHHHHHhcCCCEEEeCCc---hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEe
Confidence            9 8999999999999999999999999988   88999999988449999999999986 89999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCC-------cHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS-------DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK  329 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~  329 (339)
                      ........+++..++.+++++.++........+       .++++++++.+|+++  ++++++|+++++++|++.++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~  344 (353)
T 4dup_A          267 LGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGS  344 (353)
T ss_dssp             TTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTC
T ss_pred             cCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCC
Confidence            643322226777788899999998765543211       167889999999765  56889999999999999999988


Q ss_pred             ee-EEEEEe
Q 019535          330 CL-RCVIWM  337 (339)
Q Consensus       330 ~~-kvvl~~  337 (339)
                      .. |+||++
T Consensus       345 ~~gKvvl~~  353 (353)
T 4dup_A          345 HVGKVMLTV  353 (353)
T ss_dssp             CSSEEEEEC
T ss_pred             CCceEEEeC
Confidence            76 999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=6.4e-41  Score=305.60  Aligned_cols=262  Identities=21%  Similarity=0.310  Sum_probs=229.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++|++|++||||+...                               +             
T Consensus        61 ~~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~-------------------------------~-------------   96 (334)
T 3qwb_A           61 CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS-------------------------------N-------------   96 (334)
T ss_dssp             CCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEEC-------------------------------S-------------
T ss_pred             CCCCCccccceEEEEEEECCCCCCCCCCCEEEEee-------------------------------C-------------
Confidence            46899999999999999999999999999996531                               1             


Q ss_pred             ecccccccccceEEee-ccceEEcCCCCCccc---cccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLD-IAHVVKVDPTVPPNR---ACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGAR  173 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~-~~~~~~lp~~~~~~~---aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~  173 (339)
                            |+|+||++++ ++.++++|+++++++   |+++++.+.|||+++.+..+++++++|||+| +|++|++++|+++
T Consensus        97 ------G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~  170 (334)
T 3qwb_A           97 ------STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLK  170 (334)
T ss_dssp             ------SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHH
T ss_pred             ------CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHH
Confidence                  3999999999 999999999999999   8888889999999888888999999999998 5999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      ..|+ +|++++++++++++++++|++.++++++   .++.+.+++++++ ++|++|||+|... ++.++++++++ |+++
T Consensus       171 ~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv  244 (334)
T 3qwb_A          171 MKGA-HTIAVASTDEKLKIAKEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRK-GVFV  244 (334)
T ss_dssp             HTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEE-EEEE
T ss_pred             HCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccC-CEEE
Confidence            9999 9999999999999999999999999988   8899999999988 9999999999866 99999999997 9999


Q ss_pred             EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC-CCc----HHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535          253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-KSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK  327 (339)
Q Consensus       253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~----~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  327 (339)
                      .+|.... ....++...++.|++++.++..+.+.. +++    ++++++++.+|++++.  ++++|+++++++||+.+++
T Consensus       245 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~  321 (334)
T 3qwb_A          245 SFGNASG-LIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIES  321 (334)
T ss_dssp             ECCCTTC-CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHT
T ss_pred             EEcCCCC-CCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHh
Confidence            9997642 333566667788899999876544321 222    4688999999988765  7899999999999999998


Q ss_pred             Ccee-EEEEEeCC
Q 019535          328 GKCL-RCVIWMGE  339 (339)
Q Consensus       328 ~~~~-kvvl~~~~  339 (339)
                      ++.. |+||++++
T Consensus       322 ~~~~gKvvi~~~q  334 (334)
T 3qwb_A          322 RKTVGKLVLEIPQ  334 (334)
T ss_dssp             TCCCBEEEEECCC
T ss_pred             CCCceEEEEecCC
Confidence            8876 99999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.7e-40  Score=304.14  Aligned_cols=263  Identities=20%  Similarity=0.229  Sum_probs=223.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+....                           ...+             
T Consensus        57 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~---------------------------~~~~-------------   96 (346)
T 3fbg_A           57 SKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS---------------------------PDQN-------------   96 (346)
T ss_dssp             SSSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECCC---------------------------TTSC-------------
T ss_pred             CCCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcCC---------------------------CCCC-------------
Confidence            478999999999999999999999999999975321                           1122             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCC------CCCEEEEEc-cCHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE------VGSTVVIFG-LGSIGLAVAEG  171 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~------~~~~VLI~G-~G~iG~~a~~l  171 (339)
                            |+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++      ++++|||+| +|++|++++|+
T Consensus        97 ------G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~ql  170 (346)
T 3fbg_A           97 ------GSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQI  170 (346)
T ss_dssp             ------CSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHH
T ss_pred             ------cceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHH
Confidence                  39999999999999999999999999999999999999988889988      899999995 69999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      |+..|+ +|++++++++++++++++|+++++++++    ++.+.+++..++++|++|||+|++..++.++++++++ |++
T Consensus       171 a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~i  244 (346)
T 3fbg_A          171 AKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE----SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHI  244 (346)
T ss_dssp             HHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS----CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEE
T ss_pred             HHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc----cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEE
Confidence            999999 9999999999999999999999998865    6888888884339999999999988789999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCC---------CCCcHHHHHHHHhCCCCCCcccceeee---chhhHH
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---------AKSDIPILLKRYMDKELELDKFVTHEM---KFEEIN  319 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~  319 (339)
                      +.++...    ..++...+..+++++.++......         ..+.+.++++++.+|++++  .++++|   ++++++
T Consensus       245 v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~  318 (346)
T 3fbg_A          245 ATIVAFE----NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP--TTTKVIEGLTTENIY  318 (346)
T ss_dssp             EESSCCS----SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCC--CEEEEEESCCHHHHH
T ss_pred             EEECCCC----CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEEC--CccceecCCCHHHHH
Confidence            9987532    234555677789999886543211         0234788999999998754  477777   999999


Q ss_pred             HHHHHHhcCcee-EEEEEeCC
Q 019535          320 SAFDLLIKGKCL-RCVIWMGE  339 (339)
Q Consensus       320 ~A~~~~~~~~~~-kvvl~~~~  339 (339)
                      +||+.+++++.. |+||++++
T Consensus       319 ~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          319 QAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHhcCCcceEEEEecCC
Confidence            999999999876 99999863

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.1e-40  Score=306.31  Aligned_cols=265  Identities=18%  Similarity=0.263  Sum_probs=224.6

Q ss_pred             CCCCcccCCceeEEEEEecCCC-CCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++| ++|++||||+...                              .+            
T Consensus        77 ~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~------------------------------~~------------  114 (354)
T 2j8z_A           77 PGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL------------------------------PG------------  114 (354)
T ss_dssp             TTSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEEC------------------------------SS------------
T ss_pred             CCCCcccceeeEEEEEEECCCcCCCCCCCCEEEEec------------------------------CC------------
Confidence            3589999999999999999999 9999999996431                              12            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|+||++++++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|
T Consensus       115 -------G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G  187 (354)
T 2j8z_A          115 -------GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG  187 (354)
T ss_dssp             -------CCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             -------CcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcC
Confidence                   399999999999999999999999999999999999999888899999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+++++++++.+.++++|++.++++.+   .++.+.+.+.+.+ ++|++|||+|++. ++.++++++++ |+++.+|
T Consensus       188 a-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G  261 (354)
T 2j8z_A          188 A-IPLVTAGSQKKLQMAEKLGAAAGFNYKK---EDFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALD-GRWVLYG  261 (354)
T ss_dssp             C-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEE-EEEEECC
T ss_pred             C-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hHHHHHHHHHhcCCCceEEEECCCchH-HHHHHHhccCC-CEEEEEe
Confidence            9 9999999999999999999999999887   7888999988877 9999999999986 88999999997 9999999


Q ss_pred             cCCCCCcccccH-HHHhhcCCeEEeeecCCCCCC------Cc-HHHHHHHHhCC-CCCCcccceeeechhhHHHHHHHHh
Q 019535          256 VDQPGSQLSLSS-FEVLHSGKILMGSLFGGLKAK------SD-IPILLKRYMDK-ELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       256 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~------~~-~~~~~~~l~~g-~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      ...+ ....+++ ..++.+++++.++........      ++ ++++++++.+| ++.+.++++++|+++++++||+.+.
T Consensus       262 ~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~  340 (354)
T 2j8z_A          262 LMGG-GDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYME  340 (354)
T ss_dssp             CTTC-SCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHH
T ss_pred             ccCC-CccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHH
Confidence            7543 2345666 677888999999865443210      01 23577888889 4445567889999999999999998


Q ss_pred             cCcee-EEEEEeCC
Q 019535          327 KGKCL-RCVIWMGE  339 (339)
Q Consensus       327 ~~~~~-kvvl~~~~  339 (339)
                      ++... |+||++++
T Consensus       341 ~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          341 ANKNIGKIVLELPQ  354 (354)
T ss_dssp             TTCCSSEEEEECCC
T ss_pred             hCCCCceEEEecCC
Confidence            87655 99998763

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=8e-41  Score=305.65  Aligned_cols=263  Identities=19%  Similarity=0.260  Sum_probs=223.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +.++|.++|||++|+|+++|++|++|++||||+...                              .+            
T Consensus        59 ~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~------------------------------~~------------   96 (340)
T 3gms_A           59 RIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLR------------------------------GE------------   96 (340)
T ss_dssp             TSCSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECS------------------------------SS------------
T ss_pred             CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecC------------------------------CC------------
Confidence            457899999999999999999999999999996421                              12            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|+||++++++.++++|+++++++||++++.++|||+++.+.++++++++|||+|+ |++|++++|+|+..|
T Consensus        97 -------G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G  169 (340)
T 3gms_A           97 -------GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILN  169 (340)
T ss_dssp             -------CSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT
T ss_pred             -------ccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcC
Confidence                   399999999999999999999999999999999999999989999999999999988 599999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|+++++++++.++++++|+++++++.+   .++.+.+++++++ ++|++|||+|++. ....+++++++ |+++.+|
T Consensus       170 a-~Vi~~~~~~~~~~~~~~lga~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G  243 (340)
T 3gms_A          170 F-RLIAVTRNNKHTEELLRLGAAYVIDTST---APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIG  243 (340)
T ss_dssp             C-EEEEEESSSTTHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECC
T ss_pred             C-EEEEEeCCHHHHHHHHhCCCcEEEeCCc---ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEe
Confidence            9 9999999999999999999999999988   8899999999988 9999999999988 56677999997 9999999


Q ss_pred             cCCCCCcccccHHHHh-hcCCeEEeeecCCC-------CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535          256 VDQPGSQLSLSSFEVL-HSGKILMGSLFGGL-------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK  327 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~-------~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  327 (339)
                      ...+ .  .++...+. ..++.+..+....+       ...++++++++++.+|++++.. ++++|+++++++||+.+.+
T Consensus       244 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~  319 (340)
T 3gms_A          244 LLSG-I--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQS  319 (340)
T ss_dssp             CTTS-C--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHC
T ss_pred             ecCC-C--CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHh
Confidence            7643 2  23333333 23455544432111       1134688999999999998754 6799999999999999999


Q ss_pred             Cc-e-eEEEEEeCC
Q 019535          328 GK-C-LRCVIWMGE  339 (339)
Q Consensus       328 ~~-~-~kvvl~~~~  339 (339)
                      ++ . .|++|++++
T Consensus       320 ~~~~~GKvvl~~~~  333 (340)
T 3gms_A          320 AEKTKGKVFLTSYE  333 (340)
T ss_dssp             TTCCSSEEEEECC-
T ss_pred             cCCCCCeEEEEEec
Confidence            87 4 599999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.6e-41  Score=308.09  Aligned_cols=260  Identities=22%  Similarity=0.268  Sum_probs=219.5

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      .+..+|.++|||++|+|+++|++++ |++||||+...                              .+           
T Consensus        74 ~~~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~------------------------------~~-----------  111 (342)
T 4eye_A           74 LKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFN------------------------------FI-----------  111 (342)
T ss_dssp             SCCCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEEC------------------------------SS-----------
T ss_pred             CCCCCCCccceeEEEEEEEECCCCC-CCCCCEEEEec------------------------------CC-----------
Confidence            3457899999999999999999999 99999996532                              12           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                              |+|+||++++++.++++|+++++++|++++++++|||+++.+.++++++++|||+|+ |++|++++|+|+..
T Consensus       112 --------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~  183 (342)
T 4eye_A          112 --------GGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM  183 (342)
T ss_dssp             --------CCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHT
T ss_pred             --------CcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence                    399999999999999999999999999999999999999888899999999999997 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|++++++++++++++++|++.++++++    ++.+.+++.+++ ++|++|||+|++. ++.++++++++ |+++.+
T Consensus       184 Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~~----~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~  256 (342)
T 4eye_A          184 GA-KVIAVVNRTAATEFVKSVGADIVLPLEE----GWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVV  256 (342)
T ss_dssp             TC-EEEEEESSGGGHHHHHHHTCSEEEESST----THHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC
T ss_pred             CC-EEEEEeCCHHHHHHHHhcCCcEEecCch----hHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEE
Confidence            99 9999999999999999999999998764    788999999988 9999999999976 89999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      |...+. ...++...++.+++++.++..+.+.      ..+.+.++++++.+| +  .++++++|+++++++||+.+.++
T Consensus       257 G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~~A~~~~~~~  332 (342)
T 4eye_A          257 GFAAGG-IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGRQALQDFADG  332 (342)
T ss_dssp             -----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHHHHHHHHHTT
T ss_pred             EccCCC-CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHHHHHHHHHhC
Confidence            975432 2344555577889999998654321      123578899999999 4  45688999999999999999998


Q ss_pred             cee-EEEEEe
Q 019535          329 KCL-RCVIWM  337 (339)
Q Consensus       329 ~~~-kvvl~~  337 (339)
                      ... |+||++
T Consensus       333 ~~~gKvvl~P  342 (342)
T 4eye_A          333 KVYGKMVLVP  342 (342)
T ss_dssp             CCCSEEEEEC
T ss_pred             CCCceEEEeC
Confidence            876 999874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.9e-40  Score=301.26  Aligned_cols=262  Identities=21%  Similarity=0.244  Sum_probs=225.8

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++|++|++||||+....                             .+             
T Consensus        55 ~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~-----------------------------~~-------------   92 (325)
T 3jyn_A           55 PFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG-----------------------------PL-------------   92 (325)
T ss_dssp             SSSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSS-----------------------------SS-------------
T ss_pred             CCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecC-----------------------------CC-------------
Confidence            478999999999999999999999999999974321                             12             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~~~G~  177 (339)
                            |+|+||++++++.++++|+++++++|+++++.+.|||+++.+.++++++++|||+| +|++|++++|+|+..|+
T Consensus        93 ------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga  166 (325)
T 3jyn_A           93 ------GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA  166 (325)
T ss_dssp             ------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             ------ccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC
Confidence                  39999999999999999999999999999999999999998889999999999998 59999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|++++++++++++++++|+++++++.+   .++.+.+++.+++ ++|++|||+|... ++.++++++++ |+++.+|.
T Consensus       167 -~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~  240 (325)
T 3jyn_A          167 -KLIGTVSSPEKAAHAKALGAWETIDYSH---EDVAKRVLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPR-GLVVSFGN  240 (325)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEE-EEEEECCC
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhcCC-CEEEEEec
Confidence             9999999999999999999999999988   8899999999988 9999999999966 99999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhc-CCeEEeeecCCCC-CCCcH----HHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          257 DQPGSQLSLSSFEVLHS-GKILMGSLFGGLK-AKSDI----PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~----~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      .... ...++...+..+ .+++.+..++.+. .++++    +++++++.+|++++.  ++++|+++++++||+.+.+++.
T Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~  317 (325)
T 3jyn_A          241 ASGP-VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRT  317 (325)
T ss_dssp             TTCC-CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCC
T ss_pred             CCCC-CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCC
Confidence            6432 234566666666 5676654432221 22333    478999999988776  6799999999999999999887


Q ss_pred             e-EEEEEe
Q 019535          331 L-RCVIWM  337 (339)
Q Consensus       331 ~-kvvl~~  337 (339)
                      . |+||.+
T Consensus       318 ~Gkvvl~p  325 (325)
T 3jyn_A          318 TGSTILIP  325 (325)
T ss_dssp             CSCEEEEC
T ss_pred             CceEEEeC
Confidence            6 999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.9e-41  Score=307.54  Aligned_cols=264  Identities=19%  Similarity=0.284  Sum_probs=216.2

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ....+|.++|||++|+|+++|++|++|++||||+...                              .+           
T Consensus        56 ~~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~------------------------------~~-----------   94 (349)
T 4a27_A           56 NPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV------------------------------NY-----------   94 (349)
T ss_dssp             SCCCSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEEC------------------------------SS-----------
T ss_pred             CCCCCCccccceeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC-----------
Confidence            3457899999999999999999999999999996432                              12           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                              |+|+||++++++.++++|+++++++|++++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+
T Consensus        95 --------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~  166 (349)
T 4a27_A           95 --------NAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTV  166 (349)
T ss_dssp             --------CCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTS
T ss_pred             --------CcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence                    399999999999999999999999999999999999999888899999999999998 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |..+|++++ ++++.+.++ +|++++++ .+   .++.+.+++++++++|++|||+|++. ++.++++++++ |+++.+|
T Consensus       167 g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G  238 (349)
T 4a27_A          167 PNVTVFGTA-STFKHEAIK-DSVTHLFD-RN---ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYG  238 (349)
T ss_dssp             TTCEEEEEE-CGGGHHHHG-GGSSEEEE-TT---SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC
T ss_pred             CCcEEEEeC-CHHHHHHHH-cCCcEEEc-CC---ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEEC
Confidence            654899988 567888888 99999999 65   78999999988669999999999988 68999999997 9999998


Q ss_pred             cCCCCC---------------cccccHHHHhhcCCeEEeeecCCCC--------CCCcHHHHHHHHhCCCCCCcccceee
Q 019535          256 VDQPGS---------------QLSLSSFEVLHSGKILMGSLFGGLK--------AKSDIPILLKRYMDKELELDKFVTHE  312 (339)
Q Consensus       256 ~~~~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~l~~g~l~~~~~i~~~  312 (339)
                      ......               ...++...++.++.++.++....+.        .+++++++++++.+|+++  ++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~  316 (349)
T 4a27_A          239 SSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSL  316 (349)
T ss_dssp             -------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEE
T ss_pred             CCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccce
Confidence            643110               1235566778889999987643211        135688999999999875  568899


Q ss_pred             echhhHHHHHHHHhcCcee-EEEEEeCC
Q 019535          313 MKFEEINSAFDLLIKGKCL-RCVIWMGE  339 (339)
Q Consensus       313 ~~l~~~~~A~~~~~~~~~~-kvvl~~~~  339 (339)
                      |+++++++|++.+.+++.. |+||++++
T Consensus       317 ~~l~~~~~A~~~l~~~~~~GKvvi~~~~  344 (349)
T 4a27_A          317 WALEEVKEAMQRIHDRGNIGKLILDVEK  344 (349)
T ss_dssp             ECGGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred             ECHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            9999999999999988876 99999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3.4e-41  Score=309.16  Aligned_cols=263  Identities=16%  Similarity=0.147  Sum_probs=219.9

Q ss_pred             CCCCCcccCCceeEEEEEecCCC-CCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      +..+|.++|||++|+|+++|++| ++|++||||+...                           |...+|          
T Consensus        76 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g~~~~G----------  118 (349)
T 3pi7_A           76 PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------GLSNWG----------  118 (349)
T ss_dssp             CBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------TTSSCC----------
T ss_pred             CCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEec---------------------------cCCCCc----------
Confidence            45789999999999999999999 9999999997642                           222333          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCC-CEEEEEc-cCHHHHHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFG-LGSIGLAVAEGARL  174 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~-~~VLI~G-~G~iG~~a~~la~~  174 (339)
                               +|+||++++++.++++|+++++++||++++.++|||+ +.+.++ +++ ++|||+| +|++|++++|+|+.
T Consensus       119 ---------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~  187 (349)
T 3pi7_A          119 ---------SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKE  187 (349)
T ss_dssp             ---------SSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHH
T ss_pred             ---------cceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHH
Confidence                     9999999999999999999999999999999999996 556666 666 6888885 59999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .|+ +|++++++++++++++++|+++++++++   +++.+.+++++++ ++|++|||+|+.. ++.++++++++ |+++.
T Consensus       188 ~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~  261 (349)
T 3pi7_A          188 EGF-RPIVTVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWII  261 (349)
T ss_dssp             HTC-EEEEEESCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEE
T ss_pred             CCC-EEEEEeCCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEE
Confidence            999 9999999999999999999999999988   8899999999987 9999999999888 78999999997 99999


Q ss_pred             eccCCCCCcccccH-HHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535          254 LGVDQPGSQLSLSS-FEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI  326 (339)
Q Consensus       254 ~g~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~  326 (339)
                      +|.... ....++. ..++.|++++.+++...+.      ..+.++++++++.+|+++  ++++++|+++++++||+.+.
T Consensus       262 ~G~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~  338 (349)
T 3pi7_A          262 YGRLDP-DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAEL  338 (349)
T ss_dssp             CCCSCC-SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHH
T ss_pred             EeccCC-CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHh
Confidence            997543 3345666 6788899999998654321      124577888899999774  45889999999999999666


Q ss_pred             cCceeEEEEEe
Q 019535          327 KGKCLRCVIWM  337 (339)
Q Consensus       327 ~~~~~kvvl~~  337 (339)
                      ++...|+||++
T Consensus       339 ~~~~gKvvl~p  349 (349)
T 3pi7_A          339 TKPNGKVFIRP  349 (349)
T ss_dssp             TSSSSCEEEEC
T ss_pred             CCCCceEEEeC
Confidence            55555999875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.9e-40  Score=303.45  Aligned_cols=261  Identities=16%  Similarity=0.159  Sum_probs=221.7

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+...                           +...+|            
T Consensus        79 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~~~G------------  119 (363)
T 4dvj_A           79 GTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAG---------------------------SIIRPG------------  119 (363)
T ss_dssp             -CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECC---------------------------CTTSCC------------
T ss_pred             CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEcc---------------------------CCCCCc------------
Confidence            47899999999999999999999999999997532                           111233            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCC-----CCCEEEEEc-cCHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE-----VGSTVVIFG-LGSIGLAVAEGA  172 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~-----~~~~VLI~G-~G~iG~~a~~la  172 (339)
                             +|+||++++++.++++|+++++++||+++++++|||+++.+.++++     ++++|||+| +|++|++++|+|
T Consensus       120 -------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla  192 (363)
T 4dvj_A          120 -------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIA  192 (363)
T ss_dssp             -------SCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHH
T ss_pred             -------cceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHH
Confidence                   9999999999999999999999999999999999999988888888     899999998 599999999999


Q ss_pred             HHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          173 RLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       173 ~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      +.+ |+ +|++++++++++++++++|+++++++.+    ++.+.++++.++++|+||||+|++..++.++++++++ |++
T Consensus       193 k~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~----~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~i  266 (363)
T 4dvj_A          193 RQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK----PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRF  266 (363)
T ss_dssp             HHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS----CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEE
T ss_pred             HHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC----CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEE
Confidence            985 77 9999999999999999999999998865    6888888884449999999999987799999999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCC-----CC----CCcHHHHHHHHhCCCCCCcccceeee---chhhHH
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-----KA----KSDIPILLKRYMDKELELDKFVTHEM---KFEEIN  319 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~----~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~  319 (339)
                      +.+|..     ..++...+..+++++.++.....     ..    .+.++++++++.+|++++  .+++++   ++++++
T Consensus       267 v~~g~~-----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~  339 (363)
T 4dvj_A          267 CLIDDP-----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLK  339 (363)
T ss_dssp             EECSCC-----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHH
T ss_pred             EEECCC-----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHH
Confidence            999642     24555667788999988654321     11    234788999999998765  466655   999999


Q ss_pred             HHHHHHhcCcee-EEEEEeC
Q 019535          320 SAFDLLIKGKCL-RCVIWMG  338 (339)
Q Consensus       320 ~A~~~~~~~~~~-kvvl~~~  338 (339)
                      +|++.+.++... |+||++.
T Consensus       340 ~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          340 QAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHHHHHTCCCSEEEEECS
T ss_pred             HHHHHHHhCCCceEEEEeCc
Confidence            999999998876 9999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=4.3e-40  Score=301.04  Aligned_cols=260  Identities=18%  Similarity=0.214  Sum_probs=221.9

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~   96 (339)
                      ..++|.++|||++|+|+++|++|++|++||||+....                          |+. .+           
T Consensus        60 ~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------------g~~~~~-----------  102 (343)
T 3gaz_A           60 QQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTG--------------------------GVGGLQ-----------  102 (343)
T ss_dssp             CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC--------------------------SSTTCC-----------
T ss_pred             CCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEEeC--------------------------CCCCCC-----------
Confidence            4679999999999999999999999999999975321                          111 12           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                              |+|+||++++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+..
T Consensus       103 --------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~  174 (343)
T 3gaz_A          103 --------GTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALAR  174 (343)
T ss_dssp             --------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHT
T ss_pred             --------cceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHC
Confidence                    399999999999999999999999999999999999998888899999999999985 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++ .+++++++++++|++. ++ .+   .++.+.+++.+.+ ++|++|||+|++. ++.++++++++ |+++.+
T Consensus       175 Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~  245 (343)
T 3gaz_A          175 GA-RVFAT-ARGSDLEYVRDLGATP-ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSC  245 (343)
T ss_dssp             TC-EEEEE-ECHHHHHHHHHHTSEE-EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEE-EEEEES
T ss_pred             CC-EEEEE-eCHHHHHHHHHcCCCE-ec-cC---CCHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcC-CeEEEE
Confidence            99 89999 7899999999999988 77 55   6889999999988 9999999999866 99999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCC----C----CCCcHHHHHHHHhCCCCCCcccce-eeechhhHHHHHHHH
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGL----K----AKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLL  325 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~----~~~~~~~~~~~l~~g~l~~~~~i~-~~~~l~~~~~A~~~~  325 (339)
                      |...     .++...+..+++++.++.....    .    ..++++++++++.+|+++  ++++ ++|+++++++||+.+
T Consensus       246 g~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~  318 (343)
T 3gaz_A          246 LGWG-----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAV  318 (343)
T ss_dssp             CCCS-----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHH
T ss_pred             cccC-----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHH
Confidence            8753     2345567778999988753211    0    124688999999999876  4577 799999999999999


Q ss_pred             hcCce----e-EEEEEeC
Q 019535          326 IKGKC----L-RCVIWMG  338 (339)
Q Consensus       326 ~~~~~----~-kvvl~~~  338 (339)
                      .+++.    . |++++++
T Consensus       319 ~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          319 LGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             HTCTTCCCCSSBCEEECC
T ss_pred             HcCCCcccccceEEEEec
Confidence            88753    3 9999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=7.1e-40  Score=298.56  Aligned_cols=264  Identities=20%  Similarity=0.278  Sum_probs=225.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+.                             .+             
T Consensus        58 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~-----------------------------~~-------------   95 (333)
T 1wly_A           58 GEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLP-----------------------------PL-------------   95 (333)
T ss_dssp             --CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSS-----------------------------SC-------------
T ss_pred             CCCCccccceeEEEEEEECCCCCCCCCCCEEEEecC-----------------------------CC-------------
Confidence            468999999999999999999999999999964320                             01             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccc--cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC  175 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~  175 (339)
                            |+|+||++++++.++++|+++++++  |++++++++|||+++.+.++++++++|||+|+ |++|++++|+++..
T Consensus        96 ------G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  169 (333)
T 1wly_A           96 ------GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL  169 (333)
T ss_dssp             ------CCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHT
T ss_pred             ------CcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHC
Confidence                  3999999999999999999999999  89999999999999877889999999999996 99999999999999


Q ss_pred             CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+ +|+++++++++.+.++++|++.++++++   .++.+.+.+.+.+ ++|++|||+|+.. ++.++++++++ |+++.+
T Consensus       170 G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~  243 (333)
T 1wly_A          170 GA-TVIGTVSTEEKAETARKLGCHHTINYST---QDFAEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRPR-GMCAAY  243 (333)
T ss_dssp             TC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHHTTCCEEEEEECSCTTT-HHHHHHTEEEE-EEEEEC
T ss_pred             CC-EEEEEeCCHHHHHHHHHcCCCEEEECCC---HHHHHHHHHHhCCCCCeEEEECCcHHH-HHHHHHhhccC-CEEEEE
Confidence            99 9999999999999999999999999887   7888889888877 8999999999955 89999999997 999999


Q ss_pred             ccCCCCCcccccHH-HHhhcC--CeEEeeecCCCCC----CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535          255 GVDQPGSQLSLSSF-EVLHSG--KILMGSLFGGLKA----KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK  327 (339)
Q Consensus       255 g~~~~~~~~~~~~~-~~~~~~--~~i~~~~~~~~~~----~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  327 (339)
                      |...+ ....++.. .++.|+  +++.+++......    ++.++++++++.+|+++  ++++++|+++++++|++.+++
T Consensus       244 g~~~~-~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~  320 (333)
T 1wly_A          244 GHASG-VADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGG  320 (333)
T ss_dssp             CCTTC-CCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHH
T ss_pred             ecCCC-CcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHc
Confidence            97642 23345655 667788  8888875422111    13578899999999775  458899999999999999988


Q ss_pred             Ccee-EEEEEeCC
Q 019535          328 GKCL-RCVIWMGE  339 (339)
Q Consensus       328 ~~~~-kvvl~~~~  339 (339)
                      +... |+|+++++
T Consensus       321 ~~~~gKvvi~~~~  333 (333)
T 1wly_A          321 RQTIGSIVLLPQA  333 (333)
T ss_dssp             CSCCSEEEEETTC
T ss_pred             CCCceEEEEEeCC
Confidence            7765 99999875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.4e-39  Score=295.06  Aligned_cols=255  Identities=18%  Similarity=0.208  Sum_probs=215.2

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+++|++|++|++||||+..+..+                          ..+            
T Consensus        64 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~--------------------------~~~------------  105 (321)
T 3tqh_A           64 KNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFP--------------------------DHP------------  105 (321)
T ss_dssp             TTSCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECSTT--------------------------TCC------------
T ss_pred             cCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCC--------------------------CCC------------
Confidence            457899999999999999999999999999997653210                          112            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~~~G  176 (339)
                             |+|+||++++++.++++|+++++++|+++++++.|||+++ +.++++++++|||+| +|++|++++|+|+.+|
T Consensus       106 -------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G  177 (321)
T 3tqh_A          106 -------CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG  177 (321)
T ss_dssp             -------CCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             -------CcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC
Confidence                   3999999999999999999999999999999999999988 889999999999997 5999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc-HHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS-VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~-~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      + +|++++ +++++++++++|+++++++++   .+ +.+.+     .++|++|||+|++. .+.++++++++ |+++.+|
T Consensus       178 a-~vi~~~-~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g  245 (321)
T 3tqh_A          178 T-TVITTA-SKRNHAFLKALGAEQCINYHE---EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVP  245 (321)
T ss_dssp             C-EEEEEE-CHHHHHHHHHHTCSEEEETTT---SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECC
T ss_pred             C-EEEEEe-ccchHHHHHHcCCCEEEeCCC---cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeC
Confidence            9 899998 566789999999999999887   55 44433     47999999999988 59999999997 9999997


Q ss_pred             cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535          256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv  334 (339)
                      ....    ......+..+++++.++...  ...++++++++++.+|++++  .++++|+++++++||+.+++++.. |+|
T Consensus       246 ~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvv  317 (321)
T 3tqh_A          246 TITA----GRVIEVAKQKHRRAFGLLKQ--FNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLV  317 (321)
T ss_dssp             STTH----HHHHHHHHHTTCEEECCCCC--CCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEE
T ss_pred             CCCc----hhhhhhhhhcceEEEEEecC--CCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEE
Confidence            5421    11223456678888875322  23467999999999998765  488999999999999999998876 999


Q ss_pred             EEeC
Q 019535          335 IWMG  338 (339)
Q Consensus       335 l~~~  338 (339)
                      |+++
T Consensus       318 l~~~  321 (321)
T 3tqh_A          318 FKVR  321 (321)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            9874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-39  Score=295.37  Aligned_cols=259  Identities=20%  Similarity=0.305  Sum_probs=220.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+.                             .+             
T Consensus        85 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-------------  122 (351)
T 1yb5_A           85 PLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSST-----------------------------IS-------------  122 (351)
T ss_dssp             CCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCC-----------------------------SS-------------
T ss_pred             CCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCC-----------------------------CC-------------
Confidence            468999999999999999999999999999975321                             12             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|+||++++++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+
T Consensus       123 ------G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga  196 (351)
T 1yb5_A          123 ------GGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL  196 (351)
T ss_dssp             ------CSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC
T ss_pred             ------CcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC
Confidence                  399999999999999999999999999999999999999887889999999999997 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++.++++.+   .++.+.+.+.+++ ++|++|||+|.+. ++.++++++++ |+++.+|.
T Consensus       197 -~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~-G~iv~~g~  270 (351)
T 1yb5_A          197 -KILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGS  270 (351)
T ss_dssp             -EEEEEESSHHHHHHHHHTTCSEEEETTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCC
T ss_pred             -EEEEEeCChhHHHHHHHcCCCEEEeCCC---chHHHHHHHHcCCCCcEEEEECCChHH-HHHHHHhccCC-CEEEEEec
Confidence             9999999999999999999999999887   7888889888877 9999999999875 88999999997 99999986


Q ss_pred             CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcH----HHHHHHHhCCCCCCcccceeeechhhHHHHHHH-HhcCce-
Q 019535          257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDI----PILLKRYMDKELELDKFVTHEMKFEEINSAFDL-LIKGKC-  330 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~-~~~~~~-  330 (339)
                      .   ....++...++.+++++.++.+.... .+++    +.+.+++.+|++.  ++++++|+++++++|++. ++++.. 
T Consensus       271 ~---~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~  344 (351)
T 1yb5_A          271 R---GTIEINPRDTMAKESSIIGVTLFSST-KEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGAT  344 (351)
T ss_dssp             C---SCEEECTHHHHTTTCEEEECCGGGCC-HHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCS
T ss_pred             C---CCCccCHHHHHhCCcEEEEEEeecCC-HHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCC
Confidence            4   22455666778889999988543221 2233    3455677778654  558899999999999998 555544 


Q ss_pred             eEEEEEe
Q 019535          331 LRCVIWM  337 (339)
Q Consensus       331 ~kvvl~~  337 (339)
                      .|+||++
T Consensus       345 gKvvi~~  351 (351)
T 1yb5_A          345 GKMILLL  351 (351)
T ss_dssp             SEEEEEC
T ss_pred             eEEEEeC
Confidence            4999874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=5.9e-41  Score=303.39  Aligned_cols=250  Identities=20%  Similarity=0.227  Sum_probs=196.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++|++|++||||+..+                           +...+|            
T Consensus        56 ~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~~~G------------   96 (315)
T 3goh_A           56 WSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHT---------------------------SLKRHG------------   96 (315)
T ss_dssp             CCTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEEC---------------------------CTTSCC------------
T ss_pred             CCCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeC---------------------------CCCCCc------------
Confidence            47899999999999999999999999999997643                           122233            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                             +|+||++++++.++++|+++++++||+++++++|||+++ +.++++++++|||+|+|++|++++|+|+.+|+ 
T Consensus        97 -------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-  167 (315)
T 3goh_A           97 -------SFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-  167 (315)
T ss_dssp             -------SSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-
T ss_pred             -------ccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence                   999999999999999999999999999999999999988 88999999999999999999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|++++ ++++.++++++|++++++  +      .+   ++ ++++|++|||+|++. ...++++++++ |+++.+|...
T Consensus       168 ~Vi~~~-~~~~~~~~~~lGa~~v~~--d------~~---~v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~  232 (315)
T 3goh_A          168 VVDLVS-ASLSQALAAKRGVRHLYR--E------PS---QV-TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRI  232 (315)
T ss_dssp             EEEEEC-SSCCHHHHHHHTEEEEES--S------GG---GC-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC-
T ss_pred             EEEEEE-ChhhHHHHHHcCCCEEEc--C------HH---Hh-CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCC
Confidence            999999 899999999999999884  1      11   12 349999999999988 68899999997 9999997543


Q ss_pred             CCCcccccHHHHhhcCCeEEeeecCCCC---C-------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          259 PGSQLSLSSFEVLHSGKILMGSLFGGLK---A-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~-------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                      ..  ..   ...+.+.+.+....+....   .       ++.++++++++.+|+++  ++++++|+++++++||+.+. .
T Consensus       233 ~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~  304 (315)
T 3goh_A          233 PA--PI---DPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-Q  304 (315)
T ss_dssp             --------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-H
T ss_pred             Cc--cc---cchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-h
Confidence            21  11   1223345555544332110   0       12467899999999775  56889999999999999998 4


Q ss_pred             ceeEEEEEeCC
Q 019535          329 KCLRCVIWMGE  339 (339)
Q Consensus       329 ~~~kvvl~~~~  339 (339)
                      ...|+||+++|
T Consensus       305 ~~gKvvi~~~~  315 (315)
T 3goh_A          305 TKLKTVLTLNE  315 (315)
T ss_dssp             HCCCEEEESCC
T ss_pred             cCCcEEEEecC
Confidence            45599999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.8e-40  Score=300.14  Aligned_cols=263  Identities=14%  Similarity=0.105  Sum_probs=218.0

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+++|  +++|++||||+..+   |.                     .|+..+|           
T Consensus        54 ~~~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~---~~---------------------~g~~~~G-----------   96 (324)
T 3nx4_A           54 IRHFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTG---WG---------------------VGENHWG-----------   96 (324)
T ss_dssp             CCSSSBCCCSEEEEEEEEES--STTCCTTCEEEEEC---TT---------------------BTTTBCC-----------
T ss_pred             CCCCCccccceeEEEEEEeC--CCCCCCCCEEEEcc---cc---------------------cCCCCCC-----------
Confidence            35789999999999999999  57999999998653   11                     3333344           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--HhcCCCCCC-EEEEEcc-CHHHHHHHHHHH
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGAR  173 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~~~~~~~~~-~VLI~G~-G~iG~~a~~la~  173 (339)
                              +|+||+++|++.++++|+++++++||++++++.|||+++.  ...++++++ +|||+|+ |++|++++|+|+
T Consensus        97 --------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~  168 (324)
T 3nx4_A           97 --------GLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLH  168 (324)
T ss_dssp             --------SSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHH
T ss_pred             --------ceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHH
Confidence                    9999999999999999999999999999999999999875  345566532 4999997 999999999999


Q ss_pred             HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535          174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      .+|+ +|+++++++++.++++++|+++++|+++   .+.   +++++++++|++|||+|++. ++.++++++++ |+++.
T Consensus       169 ~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~---~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~  239 (324)
T 3nx4_A          169 KLGY-QVAAVSGRESTHGYLKSLGANRILSRDE---FAE---SRPLEKQLWAGAIDTVGDKV-LAKVLAQMNYG-GCVAA  239 (324)
T ss_dssp             HTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGG---SSC---CCSSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEE
T ss_pred             HcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCC---HHH---HHhhcCCCccEEEECCCcHH-HHHHHHHHhcC-CEEEE
Confidence            9999 9999999999999999999999999876   332   44555569999999999875 99999999997 99999


Q ss_pred             eccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535          254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC  330 (339)
Q Consensus       254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~  330 (339)
                      +|... .....++...++.|++++.++.......   .+.++++++++.+|++++  + +++|+++++++||+.+++++.
T Consensus       240 ~G~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~  315 (324)
T 3nx4_A          240 CGLAG-GFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQV  315 (324)
T ss_dssp             CCCTT-CSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCC
T ss_pred             EecCC-CCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCC
Confidence            99764 3345566677888899999986443221   134778889998887653  4 799999999999999999887


Q ss_pred             e-EEEEEeC
Q 019535          331 L-RCVIWMG  338 (339)
Q Consensus       331 ~-kvvl~~~  338 (339)
                      . |+||+++
T Consensus       316 ~gkvvv~~~  324 (324)
T 3nx4_A          316 QGRTLVKIK  324 (324)
T ss_dssp             CSEEEEECC
T ss_pred             CceEEEecC
Confidence            6 9999875

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.3e-39  Score=297.87  Aligned_cols=261  Identities=20%  Similarity=0.228  Sum_probs=213.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||+..+.                             .+             
T Consensus        82 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-------------  119 (357)
T 1zsy_A           82 PELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA-----------------------------GL-------------  119 (357)
T ss_dssp             CCSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSS-----------------------------CS-------------
T ss_pred             CCCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCC-----------------------------CC-------------
Confidence            368999999999999999999999999999975321                             01             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|+||++++++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+
T Consensus       120 ------G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga  193 (357)
T 1zsy_A          120 ------GTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL  193 (357)
T ss_dssp             ------CCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             ------ccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC
Confidence                  399999999999999999999999999999999999998888889999999999997 9999999999999999


Q ss_pred             CEEEEEcCCh----hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC--CccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          178 TRIIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       178 ~~Vi~~~~~~----~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g--~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                       ++++++++.    ++.++++++|+++++++++   . ..+.+.+.+.+  ++|+||||+|++. ...++++++++ |++
T Consensus       194 -~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~i  266 (357)
T 1zsy_A          194 -RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE---L-RRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTM  266 (357)
T ss_dssp             -EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH---H-HSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEE
T ss_pred             -EEEEEecCccchHHHHHHHHhcCCcEEEecCc---c-hHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEE
Confidence             777766443    2567889999999998643   1 12344555544  5999999999887 56789999997 999


Q ss_pred             EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCC-------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535          252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL  324 (339)
Q Consensus       252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~  324 (339)
                      +.+|... .....++...++.|++++.+++...+.       .++.++++++++.+|++++.  +.++|+++++++|++.
T Consensus       267 v~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~  343 (357)
T 1zsy_A          267 VTYGGMA-KQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEA  343 (357)
T ss_dssp             EECCCCT-TCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHH
T ss_pred             EEEecCC-CCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHH
Confidence            9998643 234556666778889999998653211       12346889999999988765  4589999999999999


Q ss_pred             HhcCcee-EEEEEe
Q 019535          325 LIKGKCL-RCVIWM  337 (339)
Q Consensus       325 ~~~~~~~-kvvl~~  337 (339)
                      +.++... |+||++
T Consensus       344 ~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          344 SMKPFISSKQILTM  357 (357)
T ss_dssp             HTSSSCSSEEEEEC
T ss_pred             HHhCCCCCcEEEeC
Confidence            9887755 999875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.5e-39  Score=296.81  Aligned_cols=263  Identities=16%  Similarity=0.144  Sum_probs=216.9

Q ss_pred             cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535           23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  102 (339)
Q Consensus        23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  102 (339)
                      .++|||++|+|+++|++|++|++||||+..+.                             .+                 
T Consensus        74 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-----------------  107 (364)
T 1gu7_A           74 APCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-----------------  107 (364)
T ss_dssp             EECCSCCEEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-----------------
T ss_pred             cccCceeEEEEEEeCCCCCcCCCCCEEEecCC-----------------------------CC-----------------
Confidence            89999999999999999999999999975421                             11                 


Q ss_pred             ccccccceEEeeccceEEcCC-----------CCCccccccccchhhhhhHHHHHhcCCCCC-CEEEEEcc-CHHHHHHH
Q 019535          103 SVSSFSEYTVLDIAHVVKVDP-----------TVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFGL-GSIGLAVA  169 (339)
Q Consensus       103 ~~g~~~~~~~~~~~~~~~lp~-----------~~~~~~aa~l~~~~~ta~~al~~~~~~~~~-~~VLI~G~-G~iG~~a~  169 (339)
                        |+|+||++++++.++++|+           ++++++||+++++++|||+++.+.++++++ ++|||+|+ |++|++++
T Consensus       108 --G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~ai  185 (364)
T 1gu7_A          108 --GTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYAS  185 (364)
T ss_dssp             --CCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHH
T ss_pred             --CcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHH
Confidence              3999999999999999999           899999999999999999988777789999 99999997 99999999


Q ss_pred             HHHHHcCCCEEEEEcCChhH----HHHHHhcCCceEEeCCCCCCccHHHHHHHhc--CC-CccEEEEcCCCHHHHHHHHH
Q 019535          170 EGARLCGATRIIGVDVISEK----FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--DG-GADYCFECVGLASLVQEAYA  242 (339)
Q Consensus       170 ~la~~~G~~~Vi~~~~~~~~----~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~--~g-~~d~v~d~~g~~~~~~~~~~  242 (339)
                      |+|+.+|+ +++++++++++    .++++++|+++++++++....++.+.+++++  ++ ++|+||||+|++. ...+++
T Consensus       186 qlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~  263 (364)
T 1gu7_A          186 QIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIAR  263 (364)
T ss_dssp             HHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHH
T ss_pred             HHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHH
Confidence            99999999 88888766554    6778899999999875200146788888887  55 9999999999988 448899


Q ss_pred             HhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC------CCcHHHHHHHHhCCCCCCcccceeee-ch
Q 019535          243 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVTHEM-KF  315 (339)
Q Consensus       243 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~l~~g~l~~~~~i~~~~-~l  315 (339)
                      +++++ |+++.+|... .....++...++.+++++.++....+..      ++.++++++++.+|++++....+..+ ++
T Consensus       264 ~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l  341 (364)
T 1gu7_A          264 KLNNN-GLMLTYGGMS-FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGT  341 (364)
T ss_dssp             TSCTT-CEEEECCCCS-SCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSS
T ss_pred             HhccC-CEEEEecCCC-CCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCch
Confidence            99997 9999999754 2345567777788899999876432110      24578899999999988765544444 45


Q ss_pred             hhHHHHHHHHhcCcee-EEEEEe
Q 019535          316 EEINSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       316 ~~~~~A~~~~~~~~~~-kvvl~~  337 (339)
                      +++.+||+.+.++... |+||++
T Consensus       342 ~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          342 KPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             SCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hhHHHHHHHHHhCCCCceEEEeC
Confidence            6999999999887655 999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.7e-38  Score=292.46  Aligned_cols=262  Identities=21%  Similarity=0.223  Sum_probs=220.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCC-CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ..+|.++|||++|+|+++|++|+ +|++||||+...                               +            
T Consensus        81 ~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~-------------------------------~------------  117 (362)
T 2c0c_A           81 VKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA-------------------------------P------------  117 (362)
T ss_dssp             CCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEEC-------------------------------S------------
T ss_pred             CCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEcc-------------------------------C------------
Confidence            46899999999999999999999 999999996531                               1            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG  176 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G  176 (339)
                             |+|+||++++++.++++|+. + .++++++++++|||+++.+.++++++++|||+|+ |++|++++|+|+..|
T Consensus       118 -------G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G  188 (362)
T 2c0c_A          118 -------GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK  188 (362)
T ss_dssp             -------CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTT
T ss_pred             -------CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC
Confidence                   39999999999999999996 3 4667788899999999888889999999999995 999999999999999


Q ss_pred             CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      + +|+++++++++.+.++++|++.++++++   .++.+.+++.+++++|++|||+|... ++.++++++++ |+++.+|.
T Consensus       189 a-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~  262 (362)
T 2c0c_A          189 C-HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDALATK-GRLIVIGF  262 (362)
T ss_dssp             C-EEEEEESSHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEE-EEEEECCC
T ss_pred             C-EEEEEECCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcC-CEEEEEeC
Confidence            9 9999999999999999999999999887   78888888877559999999999865 99999999997 99999987


Q ss_pred             CCCCCc------c---cccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCccc------ceeeechhhHH
Q 019535          257 DQPGSQ------L---SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKF------VTHEMKFEEIN  319 (339)
Q Consensus       257 ~~~~~~------~---~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~------i~~~~~l~~~~  319 (339)
                      ......      +   .+ ...++.+++++.++....+.  ..++++++++++.+|++++...      +++.|++++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~  341 (362)
T 2c0c_A          263 ISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIF  341 (362)
T ss_dssp             GGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHH
T ss_pred             CCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHH
Confidence            532110      0   22 24567789999988654332  1346889999999998876543      34678999999


Q ss_pred             HHHHHHhcCcee-EEEEEeCC
Q 019535          320 SAFDLLIKGKCL-RCVIWMGE  339 (339)
Q Consensus       320 ~A~~~~~~~~~~-kvvl~~~~  339 (339)
                      +|++.++++... |+||.+++
T Consensus       342 ~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          342 RAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHcCCCCceEEEEcCC
Confidence            999999887655 99999865

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.5e-39  Score=290.74  Aligned_cols=262  Identities=15%  Similarity=0.210  Sum_probs=221.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++|++|++||||.. +    +                        ..+             
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~-~----g------------------------~~~-------------   92 (327)
T 1qor_A           55 PSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVY-A----Q------------------------SAL-------------   92 (327)
T ss_dssp             SSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEE-S----C------------------------CSS-------------
T ss_pred             CCCCCCCCceeEEEEEEECCCCCCCCCCCEEEE-C----C------------------------CCC-------------
Confidence            458999999999999999999999999999932 1    0                        011             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|+||++++++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+
T Consensus        93 ------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~  166 (327)
T 1qor_A           93 ------GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA  166 (327)
T ss_dssp             ------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC
T ss_pred             ------ceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence                  399999999999999999999999999999999999998877889999999999985 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +|+++++++++.+.++++|++.++++.+   .++.+.+.+.+.+ ++|++|||+|... ++.++++++++ |+++.+|.
T Consensus       167 -~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~iv~~g~  240 (327)
T 1qor_A          167 -KLIGTVGTAQKAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGN  240 (327)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCC
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEECCC---ccHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEec
Confidence             9999999999999999999999999887   7888889888877 8999999999544 99999999997 99999997


Q ss_pred             CCCCCcccccHHHHhhc-CCeEEeeecCCCC-----CCCcHHHHHHHHhCCCCCCcccce--eeechhhHHHHHHHHhcC
Q 019535          257 DQPGSQLSLSSFEVLHS-GKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVT--HEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       257 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~i~--~~~~l~~~~~A~~~~~~~  328 (339)
                      ... ....++...++.+ ++++.+...+.+.     ..+.++++++++.+|++++  +++  ++|+++++++|++.++++
T Consensus       241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~  317 (327)
T 1qor_A          241 SSG-AVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESR  317 (327)
T ss_dssp             TTC-CCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTT
T ss_pred             CCC-CCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhC
Confidence            543 2234566667777 7877754322111     1234788999999998764  577  899999999999999887


Q ss_pred             cee-EEEEEe
Q 019535          329 KCL-RCVIWM  337 (339)
Q Consensus       329 ~~~-kvvl~~  337 (339)
                      ... |++|.+
T Consensus       318 ~~~gKvvl~~  327 (327)
T 1qor_A          318 ATQGSSLLIP  327 (327)
T ss_dssp             CCCBCCEEEC
T ss_pred             CCCceEEEeC
Confidence            655 999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.5e-37  Score=283.48  Aligned_cols=256  Identities=19%  Similarity=0.224  Sum_probs=219.6

Q ss_pred             CCCcccCCc----eeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535           20 VFPRILGHE----AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        20 ~~P~i~G~e----~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~   95 (339)
                      .+|.++|||    ++|+|++.  +|++|++||||+..                                           
T Consensus        65 ~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~~~-------------------------------------------   99 (336)
T 4b7c_A           65 IPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYVNGA-------------------------------------------   99 (336)
T ss_dssp             SCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEEEEE-------------------------------------------
T ss_pred             CCCCCCCcccCCceEEEEEec--CCCCCCCCCEEecc-------------------------------------------
Confidence            457788887    79999995  48899999999642                                           


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCcccc--ccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHH
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA--CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGA  172 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la  172 (339)
                               |+|+||+++|++.++++|+++++.++  ++++++++|||+++.+.++++++++|||+|+ |++|++++|++
T Consensus       100 ---------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a  170 (336)
T 4b7c_A          100 ---------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIA  170 (336)
T ss_dssp             ---------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             ---------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence                     38999999999999999999988776  7789999999999889999999999999998 99999999999


Q ss_pred             HHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535          173 RLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT  251 (339)
Q Consensus       173 ~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~  251 (339)
                      +..|+ +|+++++++++.+.+ +++|+++++++.+   .++.+.+++.+++++|++|||+|++. ++.++++++++ |++
T Consensus       171 ~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~i  244 (336)
T 4b7c_A          171 RLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN---EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFK-ARI  244 (336)
T ss_dssp             HHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEE
T ss_pred             HHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC---HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhC-CEE
Confidence            99999 999999999999999 8999999999988   88999999988669999999999865 99999999997 999


Q ss_pred             EEeccCCC-----CCcccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535          252 IVLGVDQP-----GSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL  324 (339)
Q Consensus       252 v~~g~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~  324 (339)
                      +.+|....     .....++...++.+++++.++....+..  .+.+.++++++.+|++++..  ..+++++++++||+.
T Consensus       245 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~  322 (336)
T 4b7c_A          245 VLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE--DIVEGLETFPETLLK  322 (336)
T ss_dssp             EECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE--EEEECGGGHHHHHHH
T ss_pred             EEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce--eeecCHHHHHHHHHH
Confidence            99987541     1123455667888999999987654321  24678999999999887764  456899999999999


Q ss_pred             HhcCcee-EEEEEe
Q 019535          325 LIKGKCL-RCVIWM  337 (339)
Q Consensus       325 ~~~~~~~-kvvl~~  337 (339)
                      +.+++.. |+||++
T Consensus       323 ~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          323 LFSGENFGKLVLKV  336 (336)
T ss_dssp             HHTTCCCSEEEEEC
T ss_pred             HHcCCCCceEEEeC
Confidence            9998876 999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=9.8e-38  Score=288.87  Aligned_cols=260  Identities=18%  Similarity=0.226  Sum_probs=210.1

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      .+|.++|||++|+|+++|++|++|++||||+..+.                           ...+              
T Consensus        93 ~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~---------------------------~~~~--------------  131 (375)
T 2vn8_A           93 EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP---------------------------PWKQ--------------  131 (375)
T ss_dssp             TCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC---------------------------TTSC--------------
T ss_pred             cCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCCC--------------
Confidence            48999999999999999999999999999976431                           0112              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC----CCCCCEEEEEcc-CHHHHHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN----VEVGSTVVIFGL-GSIGLAVAEGARL  174 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~----~~~~~~VLI~G~-G~iG~~a~~la~~  174 (339)
                           |+|+||++++++.++++|+++++++||+++++++|||+++.+.++    ++++++|||+|+ |++|++++|+|+.
T Consensus       132 -----G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~  206 (375)
T 2vn8_A          132 -----GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA  206 (375)
T ss_dssp             -----CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHH
T ss_pred             -----ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHh
Confidence                 399999999999999999999999999999999999998877788    899999999985 9999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEE
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~  253 (339)
                      .|+ +|++++ ++++.++++++|++.++++++   .++.+.+.+.  +++|++|||+|++ ..++.++++++++ |+++.
T Consensus       207 ~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~  278 (375)
T 2vn8_A          207 WDA-HVTAVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVT  278 (375)
T ss_dssp             TTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEE
T ss_pred             CCC-EEEEEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEE
Confidence            999 899998 678899999999999999887   7777777653  4899999999988 5568899999997 99999


Q ss_pred             eccCCCCCccc--ccH------HHHhh-------cCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          254 LGVDQPGSQLS--LSS------FEVLH-------SGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       254 ~g~~~~~~~~~--~~~------~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      +|.........  +..      ..++.       +...+.+...  ....+.++++++++.+|+++  ++++++|+++++
T Consensus       279 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~  354 (375)
T 2vn8_A          279 LVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKV  354 (375)
T ss_dssp             SCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGH
T ss_pred             eCCCcccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHH
Confidence            98642110000  100      11222       3444433221  11234578999999999775  568899999999


Q ss_pred             HHHHHHHhcCcee-EEEEEe
Q 019535          319 NSAFDLLIKGKCL-RCVIWM  337 (339)
Q Consensus       319 ~~A~~~~~~~~~~-kvvl~~  337 (339)
                      ++|++.++++... |+||++
T Consensus       355 ~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          355 PEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHcCCCCCeEEEEe
Confidence            9999999888755 999976

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.9e-38  Score=284.47  Aligned_cols=263  Identities=17%  Similarity=0.196  Sum_probs=205.5

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++  ++++|++||||+..+.                        .+|...+|            
T Consensus        58 ~~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~------------------------~~g~~~~G------------   99 (328)
T 1xa0_A           58 KTYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGY------------------------EIGVTHFG------------   99 (328)
T ss_dssp             CSSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEEST------------------------TBTTTBCC------------
T ss_pred             CCCCcccCcceEEEEEec--CCCCCCCCCEEEEccc------------------------cCCCCCCc------------
Confidence            468999999999999996  4689999999976431                        02322233            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--HhcCCCCCC-EEEEEcc-CHHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGARL  174 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~~~~~~~~~-~VLI~G~-G~iG~~a~~la~~  174 (339)
                             +|+||+++|++.++++|+++++++|+++++++.|||.++.  ...++++++ +|||+|+ |++|++++|+|+.
T Consensus       100 -------~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~  172 (328)
T 1xa0_A          100 -------GYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK  172 (328)
T ss_dssp             -------SSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHH
T ss_pred             -------cceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHH
Confidence                   9999999999999999999999999999999999998764  346788886 9999997 9999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .|+ +|++++++++++++++++|+++++++++   .+ .+.+++++++++|++|||+|++. ++.++++++++ |+++.+
T Consensus       173 ~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~-~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~  245 (328)
T 1xa0_A          173 RGY-TVEASTGKAAEHDYLRVLGAKEVLARED---VM-AERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVS  245 (328)
T ss_dssp             TTC-CEEEEESCTTCHHHHHHTTCSEEEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEEC
T ss_pred             CCC-EEEEEECCHHHHHHHHHcCCcEEEecCC---cH-HHHHHHhcCCcccEEEECCcHHH-HHHHHHhhccC-CEEEEE
Confidence            999 8999999999999999999999999876   33 34455555458999999999865 99999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      |... .....++...++.|++++.++.......   .+.++++++++.++ +  ++ ++++|+++++++||+.++++...
T Consensus       246 G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l--~~-~~~~~~l~~~~~A~~~~~~~~~~  320 (328)
T 1xa0_A          246 GLTG-GAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-L--ER-IAQEISLAELPQALKRILRGELR  320 (328)
T ss_dssp             SCCS-SSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-H--HH-HEEEEEGGGHHHHHHHHHHTCCC
T ss_pred             eecC-CCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-C--ce-eeeEeCHHHHHHHHHHHHcCCCC
Confidence            9754 2234455566778899999874322111   12345555555556 4  33 46999999999999999888755


Q ss_pred             -EEEEEeC
Q 019535          332 -RCVIWMG  338 (339)
Q Consensus       332 -kvvl~~~  338 (339)
                       |+||+++
T Consensus       321 gKvvv~~~  328 (328)
T 1xa0_A          321 GRTVVRLA  328 (328)
T ss_dssp             SEEEEECC
T ss_pred             CeEEEEeC
Confidence             9999864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.4e-38  Score=288.18  Aligned_cols=264  Identities=18%  Similarity=0.217  Sum_probs=209.3

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|  +++|++||||+..+.                        .+|...+|            
T Consensus        59 ~~~p~i~G~E~~G~V~~~~--v~~~~vGdrV~~~~~------------------------~~g~~~~G------------  100 (330)
T 1tt7_A           59 REYPLILGIDAAGTVVSSN--DPRFAEGDEVIATSY------------------------ELGVSRDG------------  100 (330)
T ss_dssp             SSCSEECCSEEEEEEEECS--STTCCTTCEEEEEST------------------------TBTTTBCC------------
T ss_pred             CCCCccccceEEEEEEEcC--CCCCCCCCEEEEccc------------------------ccCCCCCc------------
Confidence            4689999999999999974  678999999976431                        02322333            


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--HhcCCCCCC-EEEEEcc-CHHHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGARL  174 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~~~~~~~~~-~VLI~G~-G~iG~~a~~la~~  174 (339)
                             +|+||++++++.++++|+++++++|+++++++.|||.++.  ...++++++ +|||+|+ |++|++++|+|+.
T Consensus       101 -------~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~  173 (330)
T 1tt7_A          101 -------GLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK  173 (330)
T ss_dssp             -------SSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHH
T ss_pred             -------cceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHH
Confidence                   9999999999999999999999999999999999998764  346788886 9999997 9999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .|+ +|++++++++++++++++|+++++++++   .+ .+.+++++++++|++|||+|++. ++.++++++++ |+++.+
T Consensus       174 ~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~---~~-~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~iv~~  246 (330)
T 1tt7_A          174 RGY-DVVASTGNREAADYLKQLGASEVISRED---VY-DGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVS  246 (330)
T ss_dssp             HTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HC-SSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEEC
T ss_pred             CCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ch-HHHHHHhhcCCccEEEECCcHHH-HHHHHHhhcCC-CEEEEE
Confidence            999 8999999999999999999999988654   21 11223334348999999999965 99999999997 999999


Q ss_pred             ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535          255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      |... .....++...++.|++++.++.......   .+.++++++++.+|++  +++++++|+++++++||+.++++...
T Consensus       247 G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~  323 (330)
T 1tt7_A          247 GLTG-GGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQ  323 (330)
T ss_dssp             CCSS-CSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCS
T ss_pred             ecCC-CCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCC
Confidence            9764 2334556566788899999874322211   1234555666667765  45678999999999999999887755


Q ss_pred             -EEEEEe
Q 019535          332 -RCVIWM  337 (339)
Q Consensus       332 -kvvl~~  337 (339)
                       |+||++
T Consensus       324 gKvvi~~  330 (330)
T 1tt7_A          324 GRVIVKL  330 (330)
T ss_dssp             SEEEECC
T ss_pred             CeEEEeC
Confidence             999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.9e-38  Score=291.69  Aligned_cols=260  Identities=14%  Similarity=0.153  Sum_probs=211.6

Q ss_pred             CCCCCcccCCceeEEEEEecCCC-CCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      +..+|.++|||++|+|+++|++| ++|++||||+..+                               +           
T Consensus        87 ~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-------------------------------~-----------  124 (379)
T 3iup_A           87 RLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-------------------------------G-----------  124 (379)
T ss_dssp             GTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-------------------------------S-----------
T ss_pred             ccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-------------------------------C-----------
Confidence            34689999999999999999999 8999999997532                               1           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE--ccCHHHHHHHHHHHH
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF--GLGSIGLAVAEGARL  174 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~--G~G~iG~~a~~la~~  174 (339)
                              |+|+||++++++.++++|+++++++|+++++..+|||+++ +... +++++|||+  |+|++|++++|+|+.
T Consensus       125 --------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~  194 (379)
T 3iup_A          125 --------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLK  194 (379)
T ss_dssp             --------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHH
T ss_pred             --------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence                    3999999999999999999999999999999999999754 4455 889999999  459999999999999


Q ss_pred             cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhh-----cC-
Q 019535          175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCR-----KG-  247 (339)
Q Consensus       175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~-----~~-  247 (339)
                      +|+ +|+++++++++.++++++|+++++++++   .++.+.+++++++ ++|++|||+|++...+.++++++     ++ 
T Consensus       195 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G  270 (379)
T 3iup_A          195 DGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR  270 (379)
T ss_dssp             HTC-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCC
T ss_pred             CCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcccc
Confidence            999 8999999999999999999999999988   8999999999988 99999999999776788888885     33 


Q ss_pred             ---------CcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCC---CCC----cHHHHHHHHhCCCCCCccccee
Q 019535          248 ---------WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKS----DIPILLKRYMDKELELDKFVTH  311 (339)
Q Consensus       248 ---------~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~----~~~~~~~~l~~g~l~~~~~i~~  311 (339)
                               +|+++.+|... .  ..+++..++.+++++.++.++.+.   ..+    .++++++++.+ .  +.+++++
T Consensus       271 ~~~~~G~~~~g~iv~~G~~~-~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~  344 (379)
T 3iup_A          271 EYSRYGSTTHKQVYLYGGLD-T--SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSK  344 (379)
T ss_dssp             SCCTTCCCSCEEEEECCCSE-E--EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSE
T ss_pred             ceeecccccCceEEEecCCC-C--CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceE
Confidence                     04555555432 1  122333456678899887654331   112    23555666655 2  4556889


Q ss_pred             eechhhH--HHHHHHHhcCcee-EEEEEeCC
Q 019535          312 EMKFEEI--NSAFDLLIKGKCL-RCVIWMGE  339 (339)
Q Consensus       312 ~~~l~~~--~~A~~~~~~~~~~-kvvl~~~~  339 (339)
                      +|+++++  ++|++.+.++... |+||++++
T Consensus       345 ~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          345 EISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             EEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             EecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            9999999  9999999988765 99999863

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3.7e-38  Score=315.39  Aligned_cols=256  Identities=19%  Similarity=0.229  Sum_probs=216.8

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      +.|.++|||++|+|+++|++|++|++||||+...                               +              
T Consensus       263 ~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~-------------------------------~--------------  297 (795)
T 3slk_A          263 PGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMI-------------------------------P--------------  297 (795)
T ss_dssp             SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEECC-------------------------------S--------------
T ss_pred             CCCccccceeEEEEEEeCCCCCcCCCCCEEEEEe-------------------------------c--------------
Confidence            4567899999999999999999999999996431                               1              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT  178 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~  178 (339)
                           |+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ 
T Consensus       298 -----G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-  371 (795)
T 3slk_A          298 -----KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-  371 (795)
T ss_dssp             -----SCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-
T ss_pred             -----CCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999999999999999989999999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+++++++ +.++++ +|+++++++++   .++.+.+++.+++ ++|+|||+++++. ++.++++++++ |+++.+|..
T Consensus       372 ~V~~t~~~~-k~~~l~-lga~~v~~~~~---~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~  444 (795)
T 3slk_A          372 EVYATASED-KWQAVE-LSREHLASSRT---CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKT  444 (795)
T ss_dssp             CEEEECCGG-GGGGSC-SCGGGEECSSS---STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCST
T ss_pred             EEEEEeChH-Hhhhhh-cChhheeecCC---hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccc
Confidence            899999665 666666 99999999988   8999999999998 9999999999876 89999999997 999999875


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCCC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC  333 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv  333 (339)
                      .....  ..+ ....+++++.+..+....   ..+.+.++++++++|++++  +++++|+++++++||+.++++... |+
T Consensus       445 ~~~~~--~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKv  519 (795)
T 3slk_A          445 DVRDP--VEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKL  519 (795)
T ss_dssp             TCCCH--HHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEE
T ss_pred             cccCc--ccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceE
Confidence            32221  111 122357777665432111   1245788999999998765  477999999999999999998876 99


Q ss_pred             EEEeC
Q 019535          334 VIWMG  338 (339)
Q Consensus       334 vl~~~  338 (339)
                      ||++.
T Consensus       520 Vl~~~  524 (795)
T 3slk_A          520 VLTMP  524 (795)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.8e-36  Score=278.68  Aligned_cols=261  Identities=18%  Similarity=0.255  Sum_probs=218.9

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      +..+|.++|||++|+|++  ++|++|++||||+...                                            
T Consensus        73 ~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~~--------------------------------------------  106 (357)
T 2zb4_A           73 PWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSFY--------------------------------------------  106 (357)
T ss_dssp             CCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEEE--------------------------------------------
T ss_pred             CCCCCccccccEEEEEEe--cCCCCCCCCCEEEecC--------------------------------------------
Confidence            346899999999999999  8899999999996531                                            


Q ss_pred             eecccccccccceEEeeccceEEcCCCC-----CccccccccchhhhhhHHHHHhcCCCCC--CEEEEEcc-CHHHHHHH
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTV-----PPNRACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVA  169 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~-----~~~~aa~l~~~~~ta~~al~~~~~~~~~--~~VLI~G~-G~iG~~a~  169 (339)
                             |+|+||++++++.++++|+++     +++ +++++++++|||+++.+.++++++  ++|||+|+ |++|++++
T Consensus       107 -------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~  178 (357)
T 2zb4_A          107 -------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAG  178 (357)
T ss_dssp             -------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHH
T ss_pred             -------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHH
Confidence                   389999999999999999999     555 677888999999998888999999  99999997 99999999


Q ss_pred             HHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCC
Q 019535          170 EGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW  248 (339)
Q Consensus       170 ~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~  248 (339)
                      |+++..|+++|+++++++++.+.+++ +|++.++++.+   .++.+.+.+.+.+++|++|||+|... ++.++++++++ 
T Consensus       179 ~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-  253 (357)
T 2zb4_A          179 QIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPAGVDVYFDNVGGNI-SDTVISQMNEN-  253 (357)
T ss_dssp             HHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESCCHHH-HHHHHHTEEEE-
T ss_pred             HHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHhccC-
Confidence            99999998789999999999998886 99999999887   78888888887668999999999754 99999999997 


Q ss_pred             cEEEEeccCCCC-Cccccc-------HHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535          249 GKTIVLGVDQPG-SQLSLS-------SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEI  318 (339)
Q Consensus       249 G~~v~~g~~~~~-~~~~~~-------~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~  318 (339)
                      |+++.+|..... ....+.       ...++.+++++.++....+.  ..+.+.++++++.+|++++..  ..+|+++++
T Consensus       254 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~  331 (357)
T 2zb4_A          254 SHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKE--TVINGLENM  331 (357)
T ss_dssp             EEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCE--EEEECGGGH
T ss_pred             cEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCcc--ceecCHHHH
Confidence            999999875321 122221       14567789999987653321  134588999999999888763  356999999


Q ss_pred             HHHHHHHhcCcee-EEEEEeCC
Q 019535          319 NSAFDLLIKGKCL-RCVIWMGE  339 (339)
Q Consensus       319 ~~A~~~~~~~~~~-kvvl~~~~  339 (339)
                      ++||+.++++... |+||++++
T Consensus       332 ~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          332 GAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             HHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHHcCCCCceEEEEEec
Confidence            9999999888755 99999853

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.7e-35  Score=269.57  Aligned_cols=260  Identities=17%  Similarity=0.223  Sum_probs=215.7

Q ss_pred             CCCcccCCceeEEEEE--ecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           20 VFPRILGHEAIGVVES--VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      .+|+++|||++|+|++  +|+++++|++||||+..                                             
T Consensus        69 ~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~---------------------------------------------  103 (345)
T 2j3h_A           69 AQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGI---------------------------------------------  103 (345)
T ss_dssp             -CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEE---------------------------------------------
T ss_pred             CCCcCCCCeeecceEEEEEecCCCCCCCCCEEEee---------------------------------------------
Confidence            4799999999999999  99999999999999642                                             


Q ss_pred             eecccccccccceEEeeccc--eEEcCC---CCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHH
Q 019535           98 IHHFVSVSSFSEYTVLDIAH--VVKVDP---TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG  171 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~--~~~lp~---~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~l  171 (339)
                             |+|+||++++++.  ++++|+   +++++ +++++++++|||+++.+.++++++++|||+|+ |++|++++|+
T Consensus       104 -------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~  175 (345)
T 2j3h_A          104 -------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQL  175 (345)
T ss_dssp             -------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             -------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHH
Confidence                   3899999999876  999996   35555 67788899999999888889999999999997 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535          172 ARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK  250 (339)
Q Consensus       172 a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~  250 (339)
                      ++..|+ +|+++++++++.+.++ ++|++.++|+.+  ..++.+.+++.+++++|++||++|.. .++.++++++++ |+
T Consensus       176 a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~  250 (345)
T 2j3h_A          176 AKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMH-GR  250 (345)
T ss_dssp             HHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTS--CSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE-EE
T ss_pred             HHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCC--HHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcC-CE
Confidence            999999 9999999999999998 799999998765  13677788877755899999999985 499999999997 99


Q ss_pred             EEEeccCCCC----CcccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535          251 TIVLGVDQPG----SQLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL  324 (339)
Q Consensus       251 ~v~~g~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~  324 (339)
                      ++.+|.....    ....++...++.+++++.++....+.  ..+.+.++++++.+|++++  ++.++|+|+++++||+.
T Consensus       251 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~~  328 (345)
T 2j3h_A          251 IAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALVG  328 (345)
T ss_dssp             EEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHHH
T ss_pred             EEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHHH
Confidence            9999865321    12345556677889999987544321  1123788999999998763  46678999999999999


Q ss_pred             HhcCcee-EEEEEeCC
Q 019535          325 LIKGKCL-RCVIWMGE  339 (339)
Q Consensus       325 ~~~~~~~-kvvl~~~~  339 (339)
                      ++++... |+|+.+++
T Consensus       329 ~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          329 LFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             HHTTCCSSEEEEESSC
T ss_pred             HHcCCCceEEEEEeCC
Confidence            9988766 99999853

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.5e-34  Score=261.90  Aligned_cols=258  Identities=17%  Similarity=0.205  Sum_probs=213.4

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|++.  +|++|++||||+..                                              
T Consensus        61 ~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~----------------------------------------------   92 (333)
T 1v3u_A           61 LKEGAVMMGQQVARVVES--KNSAFPAGSIVLAQ----------------------------------------------   92 (333)
T ss_dssp             CCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEEC----------------------------------------------
T ss_pred             CCCCcccccceEEEEEec--CCCCCCCCCEEEec----------------------------------------------
Confidence            467889999999999995  57899999999642                                              


Q ss_pred             ecccccccccceEEeeccceEEcCCC----CCccc-cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPT----VPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGA  172 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~----~~~~~-aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la  172 (339)
                            |+|+||++++++.++++|++    +++++ +++++++++|||+++.+.++++++++|||+|+ |++|++++|++
T Consensus        93 ------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~  166 (333)
T 1v3u_A           93 ------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIA  166 (333)
T ss_dssp             ------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHH
T ss_pred             ------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHH
Confidence                  28999999999999999997    88887 47888999999999888889999999999997 99999999999


Q ss_pred             HHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535          173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       173 ~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  252 (339)
                      +..|+ +|+++++++++.+.++++|++.++|..+  .+++.+.+.+.+.+++|++||++|.+. ++.++++++++ |+++
T Consensus       167 ~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v  241 (333)
T 1v3u_A          167 KLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIA  241 (333)
T ss_dssp             HHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEE
T ss_pred             HHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC--HHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEE
Confidence            99999 9999999999999999999988888764  246778888877668999999999876 89999999997 9999


Q ss_pred             EeccCCCCC----c-ccccHHHHhhcCCeEEeeecCCCC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535          253 VLGVDQPGS----Q-LSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL  324 (339)
Q Consensus       253 ~~g~~~~~~----~-~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~  324 (339)
                      .+|......    . ...+...++.+++++.++....+.   ..+.++++++++.+|++++...  .+++++++++||+.
T Consensus       242 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~  319 (333)
T 1v3u_A          242 ICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIE  319 (333)
T ss_dssp             ECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHH
T ss_pred             EEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHH
Confidence            999754211    1 113556678889999998654331   1245778999999998887644  45799999999999


Q ss_pred             HhcCcee-EEEEEe
Q 019535          325 LIKGKCL-RCVIWM  337 (339)
Q Consensus       325 ~~~~~~~-kvvl~~  337 (339)
                      ++++... |+||++
T Consensus       320 ~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          320 MLNGANLGKAVVTA  333 (333)
T ss_dssp             HHTTCCSBEEEEEC
T ss_pred             HHcCCCCceEEEeC
Confidence            9887755 999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=4.8e-35  Score=263.04  Aligned_cols=244  Identities=20%  Similarity=0.302  Sum_probs=199.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+           ||||+..+                              .+             
T Consensus        53 ~~~p~i~G~e~~G~V~-----------GdrV~~~~------------------------------~~-------------   78 (302)
T 1iz0_A           53 LHPPFIPGMEVVGVVE-----------GRRYAALV------------------------------PQ-------------   78 (302)
T ss_dssp             CCSSBCCCCEEEEEET-----------TEEEEEEC------------------------------SS-------------
T ss_pred             CCCCCcccceEEEEEE-----------CcEEEEec------------------------------CC-------------
Confidence            4689999999999998           99996532                              12             


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA  177 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~  177 (339)
                            |+|+||++++++.++++|+++++++||+++++++|||+++.+.. ++++++|||+|+ |++|++++|+|+..|+
T Consensus        79 ------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga  151 (302)
T 1iz0_A           79 ------GGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL  151 (302)
T ss_dssp             ------CCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC
T ss_pred             ------cceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC
Confidence                  39999999999999999999999999999999999999987777 999999999997 9999999999999999


Q ss_pred             CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +|+++++++++.+.++++|+++++++++  ..++.+.+     +++|++|| +|+.. ++.++++++++ |+++.+|..
T Consensus       152 -~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~~~~~-----~~~d~vid-~g~~~-~~~~~~~l~~~-G~~v~~g~~  220 (302)
T 1iz0_A          152 -RVLAAASRPEKLALPLALGAEEAATYAE--VPERAKAW-----GGLDLVLE-VRGKE-VEESLGLLAHG-GRLVYIGAA  220 (302)
T ss_dssp             -EEEEEESSGGGSHHHHHTTCSEEEEGGG--HHHHHHHT-----TSEEEEEE-CSCTT-HHHHHTTEEEE-EEEEEC---
T ss_pred             -EEEEEeCCHHHHHHHHhcCCCEEEECCc--chhHHHHh-----cCceEEEE-CCHHH-HHHHHHhhccC-CEEEEEeCC
Confidence             9999999999999999999999887642  01333333     57999999 99855 99999999997 999999875


Q ss_pred             CCCCcccccHHHHhhcCCeEEeeecCCC-CCCCcHHHHHH---HHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          258 QPGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDIPILLK---RYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~---~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      ... ...++...++.+++++.++..+.+ ...+.++++++   ++.+|+++  ++++++|+++++++|++.++++... |
T Consensus       221 ~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gK  297 (302)
T 1iz0_A          221 EGE-VAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGK  297 (302)
T ss_dssp             -----CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBE
T ss_pred             CCC-CCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCce
Confidence            432 224555567788999998865322 12346888999   99999775  4588999999999999999887655 9


Q ss_pred             EEEEe
Q 019535          333 CVIWM  337 (339)
Q Consensus       333 vvl~~  337 (339)
                      +++.+
T Consensus       298 vvv~~  302 (302)
T 1iz0_A          298 VVVRL  302 (302)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=9.3e-29  Score=271.11  Aligned_cols=224  Identities=18%  Similarity=0.219  Sum_probs=186.5

Q ss_pred             cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 019535          106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  184 (339)
Q Consensus       106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~  184 (339)
                      +|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++
T Consensus      1621 ~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~ 1699 (2512)
T 2vz8_A         1621 GLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTV 1699 (2512)
T ss_dssp             CSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             ceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEe
Confidence            89999999999999999999999999999999999999988899999999999976 9999999999999999 999999


Q ss_pred             CChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          185 VISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       185 ~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      +++++.+++++    +|+++++++++   .++.+.+++.+++ ++|+||||+++.. ++.++++++++ |+++.+|....
T Consensus      1700 ~s~~k~~~l~~~~~~lga~~v~~~~~---~~~~~~i~~~t~g~GvDvVld~~g~~~-l~~~l~~L~~~-Gr~V~iG~~~~ 1774 (2512)
T 2vz8_A         1700 GSAEKRAYLQARFPQLDETCFANSRD---TSFEQHVLRHTAGKGVDLVLNSLAEEK-LQASVRCLAQH-GRFLEIGKFDL 1774 (2512)
T ss_dssp             SCHHHHHHHHHHCTTCCSTTEEESSS---SHHHHHHHHTTTSCCEEEEEECCCHHH-HHHHHTTEEEE-EEEEECCCHHH
T ss_pred             CChhhhHHHHhhcCCCCceEEecCCC---HHHHHHHHHhcCCCCceEEEECCCchH-HHHHHHhcCCC-cEEEEeecccc
Confidence            99999999986    78899999988   8899999999988 9999999998555 99999999997 99999985421


Q ss_pred             CCcccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHH----hCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535          260 GSQLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRY----MDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R  332 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l----~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k  332 (339)
                      ...... ...++.+++++.++......  ..+.+.++++++    .++++.  ++++++|+++++++|++.+.++... |
T Consensus      1775 ~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GK 1851 (2512)
T 2vz8_A         1775 SNNHAL-GMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGK 1851 (2512)
T ss_dssp             HTTCEE-EGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSE
T ss_pred             cccCcc-cccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccce
Confidence            111111 12355679999887654321  123455555554    456554  4578999999999999999988766 9


Q ss_pred             EEEEeC
Q 019535          333 CVIWMG  338 (339)
Q Consensus       333 vvl~~~  338 (339)
                      +||.++
T Consensus      1852 vVi~~~ 1857 (2512)
T 2vz8_A         1852 VVIQVR 1857 (2512)
T ss_dssp             EEEECS
T ss_pred             EEEECC
Confidence            999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=4.6e-23  Score=173.45  Aligned_cols=184  Identities=23%  Similarity=0.284  Sum_probs=139.8

Q ss_pred             cceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535          116 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  194 (339)
Q Consensus       116 ~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  194 (339)
                      +.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999998878889999999999985 9999999999999999 9999999999998899


Q ss_pred             hcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhc
Q 019535          195 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  273 (339)
Q Consensus       195 ~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  273 (339)
                      ++|++.+++..+   .+..+.+.+.+.+ ++|++||++|... ++.++++++++ |+++.+|.........++.. .+.+
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccC-CEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988888877   6788888888766 8999999998755 99999999997 99999987542122223332 3457


Q ss_pred             CCeEEeeec------CCCCCCCcHHHHHHHHhCCCCCCc
Q 019535          274 GKILMGSLF------GGLKAKSDIPILLKRYMDKELELD  306 (339)
Q Consensus       274 ~~~i~~~~~------~~~~~~~~~~~~~~~l~~g~l~~~  306 (339)
                      ++++.+...      +.....+.+.++++++.+|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            888876432      111113467889999999988765

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.22  E-value=3.5e-12  Score=110.28  Aligned_cols=171  Identities=11%  Similarity=0.040  Sum_probs=110.2

Q ss_pred             cCCCCEEeecc-------CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccccccccceEEeec
Q 019535           43 VVEGDVVIPHF-------LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  115 (339)
Q Consensus        43 ~~~Gd~V~~~~-------~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  115 (339)
                      +++||+|++.+       ...||.|..|+.|..+.|......  +     |                   ...++..++.
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--~-----G-------------------~~~~~~~~~~   57 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--E-----G-------------------VKINGFEVYR   57 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--T-----T-------------------EEETTEEEEC
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--C-----C-------------------CEEEEEEEeC
Confidence            89999999987       678999999998888888643210  1     1                   2222222222


Q ss_pred             cceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          116 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       116 ~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      .....+++......++.+. +...+ . +....++.++++||.+|+| .|..++.+++. +. +|++++.+++..+.+++
T Consensus        58 p~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~  131 (248)
T 2yvl_A           58 PTLEEIILLGFERKTQIIY-PKDSF-Y-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQK  131 (248)
T ss_dssp             CCHHHHHHHTSCCSSCCCC-HHHHH-H-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHhcCcCCCCccc-chhHH-H-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHH
Confidence            1111111111111111111 22222 2 5566788899999999998 58999999988 66 99999999998888765


Q ss_pred             c----CC-c--eEEeCCCCCCccHHHHHHHhc-CC-CccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          196 F----GV-T--EFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       196 ~----ga-~--~vi~~~~~~~~~~~~~l~~~~-~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .    +. .  .++..      ++.    +.. .+ ++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus       132 ~~~~~~~~~~~~~~~~------d~~----~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          132 NLKKFNLGKNVKFFNV------DFK----DAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHTTCCTTEEEECS------CTT----TSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHcCCCCcEEEEEc------Chh----hcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            3    42 1  22221      111    112 23 799999887765 6689999999997 99988754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.93  E-value=2e-11  Score=113.28  Aligned_cols=183  Identities=14%  Similarity=0.149  Sum_probs=127.9

Q ss_pred             CcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecc
Q 019535           22 PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHF  101 (339)
Q Consensus        22 P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~  101 (339)
                      -...|+|.++.|.++|++++++.+|+.++.-.-.                        .++.                ..
T Consensus        74 ~~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk------------------------~~~~----------------~~  113 (404)
T 1gpj_A           74 WVKRGSEAVRHLFRVASGLESMMVGEQEILRQVK------------------------KAYD----------------RA  113 (404)
T ss_dssp             EEEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH------------------------HHHH----------------HH
T ss_pred             eeecCchHhhhheeeccCCCCCcCCcchhHHHHH------------------------HHHH----------------HH
Confidence            3467889999999999999999999987421000                        0000                00


Q ss_pred             cccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhc---CCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535          102 VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus       102 ~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~---~~~~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      ...|++++|+..+...++.+|++++.+.++.. .++.++|.++....   +-.++++|+|+|+|.+|.++++.++..|++
T Consensus       114 ~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~  192 (404)
T 1gpj_A          114 ARLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVR  192 (404)
T ss_dssp             HHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCS
T ss_pred             HHcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCC
Confidence            00136888888888889999999887776654 37778887653322   124789999999999999999999999988


Q ss_pred             EEEEEcCChhHH-HHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHH--HHHHHH--h--hcCCcEE
Q 019535          179 RIIGVDVISEKF-EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLV--QEAYAC--C--RKGWGKT  251 (339)
Q Consensus       179 ~Vi~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~--~~~~~~--l--~~~~G~~  251 (339)
                      +|+++++++++. +.++++|+. +++.     .++.+.+     .++|+||+|++.+..+  ...++.  +  +++ +.+
T Consensus       193 ~V~v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~  260 (404)
T 1gpj_A          193 AVLVANRTYERAVELARDLGGE-AVRF-----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPI  260 (404)
T ss_dssp             EEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCE
T ss_pred             EEEEEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCE
Confidence            899999998886 667788875 3332     2333332     2589999999865422  134444  3  455 677


Q ss_pred             EEeccC
Q 019535          252 IVLGVD  257 (339)
Q Consensus       252 v~~g~~  257 (339)
                      +.++..
T Consensus       261 v~vdia  266 (404)
T 1gpj_A          261 LIIDIA  266 (404)
T ss_dssp             EEEECC
T ss_pred             EEEEcc
Confidence            777654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.74  E-value=1.6e-08  Score=92.34  Aligned_cols=118  Identities=21%  Similarity=0.198  Sum_probs=85.7

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce--EEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.++++++..  +++.+.   .++.+.+.     ++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc-----CCCEEEEC
Confidence            4899999999999999999999999 9999999999999988776443  344333   33433332     58999999


Q ss_pred             CCCHHH------HHHHHHHhhcCCcEEEEeccCCCCC-----cccccHHHHhhcCCeEEee
Q 019535          231 VGLASL------VQEAYACCRKGWGKTIVLGVDQPGS-----QLSLSSFEVLHSGKILMGS  280 (339)
Q Consensus       231 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~i~~~  280 (339)
                      ++.+..      .+..++.++++ |+++.++...++.     +..++...+..+++++.+.
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~  297 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGV  297 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECC
T ss_pred             CCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEe
Confidence            986542      56778899997 9999998754321     1223333344567776664

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.66  E-value=1.4e-08  Score=95.55  Aligned_cols=173  Identities=16%  Similarity=0.140  Sum_probs=110.2

Q ss_pred             hhhhhhHHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHH
Q 019535          136 GVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ  214 (339)
Q Consensus       136 ~~~ta~~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~  214 (339)
                      ...++++++.+..+ ...+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+.+.++++|++ ++        ++.+
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~e  325 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVEE  325 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHHH
Confidence            34455665433222 6789999999999999999999999999 999999999998888889975 22        2222


Q ss_pred             HHHHhcCCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCC---eEEeeecCCCCCCCc
Q 019535          215 IIIDMTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK---ILMGSLFGGLKAKSD  290 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~  290 (339)
                      .+     .++|+|+++++....+. ..++.++++ ++++.+|...    ..++...+..+.+   ++.+.. ..+. ...
T Consensus       326 ~l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~----~eId~~aL~~~aL~~~~I~~~l-dv~~-~~~  393 (494)
T 3ce6_A          326 AI-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD----NEIDMAGLERSGATRVNVKPQV-DLWT-FGD  393 (494)
T ss_dssp             HG-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG----GGBCHHHHHHTTCEEEEEETTE-EEEE-CTT
T ss_pred             HH-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC----CccCHHHHHHhhhccceEEEEE-EEee-cCC
Confidence            21     25899999999776555 788999997 9999998652    1345555555433   333221 0000 011


Q ss_pred             HHHHHHHHhCCCCC--------CcccceeeechhhHHHHHHHHhcCcee
Q 019535          291 IPILLKRYMDKELE--------LDKFVTHEMKFEEINSAFDLLIKGKCL  331 (339)
Q Consensus       291 ~~~~~~~l~~g~l~--------~~~~i~~~~~l~~~~~A~~~~~~~~~~  331 (339)
                      +...+.++.++++.        +...+++.| ++++.++++.+.++...
T Consensus       394 ~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~  441 (494)
T 3ce6_A          394 TGRSIIVLSEGRLLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEY  441 (494)
T ss_dssp             TCCEEEEEGGGSCHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGC
T ss_pred             cchHHHHHhCCCEEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCC
Confidence            11122233444432        111223334 56788888887776543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.58  E-value=1.4e-07  Score=86.55  Aligned_cols=98  Identities=19%  Similarity=0.207  Sum_probs=75.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|+....+...  ..++.+.+.     ++|+||+|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l~-----~aDvVi~~  238 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAVK-----RADLVIGA  238 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHHc-----CCCEEEEC
Confidence            57899999999999999999999999 99999999999888876 67653232222  033333332     48999999


Q ss_pred             CCCHHH------HHHHHHHhhcCCcEEEEeccCC
Q 019535          231 VGLASL------VQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       231 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      ++.+..      .+..++.++++ |.++.++...
T Consensus       239 ~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~  271 (377)
T 2vhw_A          239 VLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ  271 (377)
T ss_dssp             CCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred             CCcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence            976653      56788899997 9999998654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.55  E-value=1.4e-07  Score=86.70  Aligned_cols=147  Identities=20%  Similarity=0.243  Sum_probs=95.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCC------------C----CccHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNC------------G----DKSVSQ  214 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~------------~----~~~~~~  214 (339)
                      ++.+|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|+..+ ++..+.            .    .....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            58899999999999999999999999 89999999999888888998654 222110            0    000122


Q ss_pred             HHHHhcCCCccEEEEcC---CCH--HH-HHHHHHHhhcCCcEEEEeccCCCCC-cccccHHHHhhcCCeEEeeecCCCCC
Q 019535          215 IIIDMTDGGADYCFECV---GLA--SL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLHSGKILMGSLFGGLKA  287 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~---g~~--~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  287 (339)
                      .+.+... ++|+||+|+   |.+  .. .+..++.++++ +.++.++...++. ....+...+..+++++.+...  .+ 
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~--~p-  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN--VP-  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS--GG-
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC--Cc-
Confidence            2444333 699999999   432  22 36788999997 9999998643322 111222234456777777532  11 


Q ss_pred             CCcHHHHHHHHhCCCCC
Q 019535          288 KSDIPILLKRYMDKELE  304 (339)
Q Consensus       288 ~~~~~~~~~~l~~g~l~  304 (339)
                      .....++.+++.++.++
T Consensus       325 ~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHHH
Confidence            12245577777666443

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.50  E-value=5.9e-07  Score=82.12  Aligned_cols=98  Identities=21%  Similarity=0.304  Sum_probs=71.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+++ +|+....+..+  ..++.+.+.     ++|++|+|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~-----~~DvVi~~  236 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ-----HADLLIGA  236 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh-----CCCEEEEC
Confidence            46899999999999999999999999 99999999988888765 77653333322  123333332     48999999


Q ss_pred             CCCHHH------HHHHHHHhhcCCcEEEEeccCC
Q 019535          231 VGLASL------VQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       231 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      ++.+..      .+..++.++++ |+++.++...
T Consensus       237 ~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          237 VLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             CC-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            986542      56788899997 9999998754

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.35  E-value=1.5e-06  Score=80.23  Aligned_cols=126  Identities=17%  Similarity=0.191  Sum_probs=84.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE-eCCCC----------CCccH----HHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNC----------GDKSV----SQII  216 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi-~~~~~----------~~~~~----~~~l  216 (339)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.++++|+..+. +..+.          ...++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            47899999999999999999999999 899999999999888889976431 11000          00111    1123


Q ss_pred             HHhcCCCccEEEEcCCCH-----HH-HHHHHHHhhcCCcEEEEeccCCCCCcccccH--H-HHhhcCCeEEeee
Q 019535          217 IDMTDGGADYCFECVGLA-----SL-VQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--F-EVLHSGKILMGSL  281 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~--~-~~~~~~~~i~~~~  281 (339)
                      .+... ++|+||++++.+     .. .+..++.++++ +.++.++...++ .+....  . .+..+++++.+..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence            33322 589999995321     21 36788999997 999999865322 122221  1 1445678888754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.18  E-value=1.5e-06  Score=76.05  Aligned_cols=104  Identities=18%  Similarity=0.279  Sum_probs=73.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~  217 (339)
                      +.....+.++.+||.+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+. ..+ ....   .++.+.  
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~---~d~~~~--  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERV-TIKV---RDISEG--  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGE-EEEC---CCGGGC--
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCE-EEEE---CCHHHc--
Confidence            45667888999999999886 888889998864 2399999999988887765    343 222 1111   222211  


Q ss_pred             HhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +..+.+|+|+...+.+ ..++.+.+.|+++ |+++.+..
T Consensus       177 -~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          177 -FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             -CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             -ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence             1223799999766654 5688999999997 99888753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.09  E-value=3.7e-06  Score=76.26  Aligned_cols=105  Identities=20%  Similarity=0.251  Sum_probs=75.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC--CCCCcc------------HHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK--NCGDKS------------VSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~--~~~~~~------------~~~~l~  217 (339)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++.++++++.+.++++|+..+ +..  ......            -.+.+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence            57899999999999999999999999 89999999999999999987532 110  000000            011222


Q ss_pred             HhcCCCccEEEEcCCCH------HHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          218 DMTDGGADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      +.. ..+|+||.++..+      ...+..++.++++ +.+|.++...++
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG  307 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG  307 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC
Confidence            322 3699999986322      1257899999997 999999876544

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.08  E-value=5.2e-06  Score=72.18  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=69.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .++.+||.+|+|. |..+..+++.. |. +|++++.+++..+.+++.+.. .++..+.   .++     ....+.+|+|+
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~v~  153 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAII  153 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCCceeEEE
Confidence            5788999999987 89999999887 66 999999999999998876532 2332222   111     12223799999


Q ss_pred             EcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          229 ECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .... ...++.+.+.|+++ |+++....
T Consensus       154 ~~~~-~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          154 RIYA-PCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             EESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             EeCC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence            6444 34489999999998 99988754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.08  E-value=2.4e-05  Score=62.08  Aligned_cols=91  Identities=21%  Similarity=0.158  Sum_probs=66.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ..++.+|+|+|+|.+|+.+++.++..|. +|+++++++++.+.++ ..|... +..+.   .+ .+.+.+....++|+||
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~---~~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA---AE-FETLKECGMEKADMVF   89 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT---TS-HHHHHTTTGGGCSEEE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC---CC-HHHHHHcCcccCCEEE
Confidence            4567899999999999999999999999 9999999998887776 666643 33222   12 2333332122799999


Q ss_pred             EcCCCHHHHHHHHHHhhc
Q 019535          229 ECVGLASLVQEAYACCRK  246 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~  246 (339)
                      .+++.......+...++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999987755566666554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.07  E-value=1.3e-05  Score=73.29  Aligned_cols=105  Identities=16%  Similarity=0.204  Sum_probs=74.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe-------------CCCCCCccH----HH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN-------------SKNCGDKSV----SQ  214 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~-------------~~~~~~~~~----~~  214 (339)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.++++++.+.++++|+..+-.             +......++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 9999999999999999998753211             000000011    11


Q ss_pred             HHHHhcCCCccEEEEcCCCH------HHHHHHHHHhhcCCcEEEEeccCCC
Q 019535          215 IIIDMTDGGADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQP  259 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~  259 (339)
                      .+.+.. .+.|+||.|+..+      ...+..++.++++ ..+|.++...+
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~G  316 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERG  316 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGT
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCC
Confidence            222222 2589999986322      1257889999997 99999986543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.03  E-value=3.5e-05  Score=67.57  Aligned_cols=99  Identities=13%  Similarity=0.149  Sum_probs=74.0

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCce--EEeCCCCCCccHHHHHHHh
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE--FVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~--vi~~~~~~~~~~~~~l~~~  219 (339)
                      ..++++++++||.+|+|+.+..++.+++..|+ +|++++.+++..+.+++.    |...  ++..+.   .       ++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~-------~l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---T-------VI  184 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---G-------GG
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---h-------hC
Confidence            35678999999999998877888888888898 999999999998888653    5322  222222   1       12


Q ss_pred             cCCCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+.||+||.....+   ..++++.+.|+++ |+++....
T Consensus       185 ~d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          185 DGLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             GGCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CCCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            234899999655432   5689999999998 99988753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.02  E-value=9.4e-05  Score=55.20  Aligned_cols=93  Identities=18%  Similarity=0.165  Sum_probs=65.7

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +.+|+|+|+|.+|..+++.+...| . +|+++++++++.+.++..+...+ .+..+      .+.+.+... ++|+||+|
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~-~~d~vi~~   76 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD------EAGLAKALG-GFDAVISA   76 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC------HHHHHHHHc-CCCEEEEC
Confidence            468999999999999999999999 6 89999999998888876665433 22222      233444332 69999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ++..........+...+ -.++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEe
Confidence            98766444444555554 455544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.99  E-value=6.1e-06  Score=64.70  Aligned_cols=107  Identities=12%  Similarity=0.083  Sum_probs=73.7

Q ss_pred             hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCceEEeCCCCCCccHHH
Q 019535          136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQ  214 (339)
Q Consensus       136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~  214 (339)
                      +++++++++.. +....+.+|+|+|+|.+|.+.++.++..|+ +|+++++++++.+. +++++.. +....     ++.+
T Consensus         5 ~~sv~~~a~~~-~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~-~~~~~-----~~~~   76 (144)
T 3oj0_A            5 KVSIPSIVYDI-VRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYE-YVLIN-----DIDS   76 (144)
T ss_dssp             CCSHHHHHHHH-HHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCE-EEECS-----CHHH
T ss_pred             cccHHHHHHHH-HHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCc-eEeec-----CHHH
Confidence            34556665433 333458999999999999999999888999 69999999888655 5667753 22222     3333


Q ss_pred             HHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          215 IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+.     ++|+||.|++..... ...+.+.++ +.++.++.+
T Consensus        77 ~~~-----~~Divi~at~~~~~~-~~~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           77 LIK-----NNDVIITATSSKTPI-VEERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HHH-----TCSEEEECSCCSSCS-BCGGGCCTT-CEEEECCSS
T ss_pred             Hhc-----CCCEEEEeCCCCCcE-eeHHHcCCC-CEEEEccCC
Confidence            332     489999999876422 122567776 888888754

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.98  E-value=4.5e-06  Score=75.24  Aligned_cols=105  Identities=19%  Similarity=0.208  Sum_probs=69.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhc----C-------------CceEEeCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF----G-------------VTEFVNSK  205 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~----g-------------a~~vi~~~  205 (339)
                      +...+.+.++.+||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    |             ...++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556788999999999876 8888888888763 3999999999888777552    1             11222222


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          206 NCGDKSVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      -   .+.   ...+..+.+|+|+-....+ ..++.+.+.|+++ |+++.+..
T Consensus       176 ~---~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 I---SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             T---TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             h---HHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            2   111   1111223699998554443 3488999999998 99987753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.84  E-value=9.6e-05  Score=67.79  Aligned_cols=100  Identities=17%  Similarity=0.234  Sum_probs=74.9

Q ss_pred             HHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          142 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       142 ~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.. +        .++.+.+    
T Consensus       208 ~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v--------~~Leeal----  273 (435)
T 3gvp_A          208 DGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-L--------VKLNEVI----  273 (435)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-E--------CCHHHHT----
T ss_pred             HHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-e--------ccHHHHH----
Confidence            33444333 3478999999999999999999999999 899999988776666666643 2        1222222    


Q ss_pred             CCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccC
Q 019535          221 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~  257 (339)
                       ...|+++.|.+....+. ..++.++++ +.++.+|..
T Consensus       274 -~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg  309 (435)
T 3gvp_A          274 -RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHS  309 (435)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSST
T ss_pred             -hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCC
Confidence             25899999988665454 888999997 998888765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.80  E-value=0.00032  Score=57.05  Aligned_cols=87  Identities=17%  Similarity=0.256  Sum_probs=64.1

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceEE-eCCCCCCccHHHHHHHhcC-CCccEEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTD-GGADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~~~~~l~~~~~-g~~d~v~d  229 (339)
                      +.+|+|+|.|.+|..+++.++.. |. +|+++++++++.+.+++.|...+. |..+      .+.+.+.++ .++|++|.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~------~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD------PDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC------HHHHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC------HHHHHhccCCCCCCEEEE
Confidence            56899999999999999999998 99 899999999999888888876443 2222      223344312 37999999


Q ss_pred             cCCCHHHHHHHHHHhhc
Q 019535          230 CVGLASLVQEAYACCRK  246 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~  246 (339)
                      ++++......+...++.
T Consensus       112 ~~~~~~~~~~~~~~~~~  128 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQR  128 (183)
T ss_dssp             CCSSHHHHHHHHHHHHH
T ss_pred             eCCChHHHHHHHHHHHH
Confidence            99986644444444444

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.79  E-value=0.00011  Score=64.65  Aligned_cols=94  Identities=19%  Similarity=0.241  Sum_probs=71.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|+|+|.|.+|+.+++.++..|+ +|++.++++++.+.++++|+.. ++.     .++.+.+     ...|+|+.+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDvVi~~  220 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI-----SKAAQEL-----RDVDVCINT  220 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG-----GGHHHHT-----TTCSEEEEC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh-----hhHHHHh-----cCCCEEEEC
Confidence            368899999999999999999999999 9999999988877777788653 322     1222221     258999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++....-+..+..++++ +.++.++..
T Consensus       221 ~p~~~i~~~~l~~mk~~-~~lin~ar~  246 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSH-TFVIDLASK  246 (293)
T ss_dssp             CSSCCBCHHHHHHSCTT-CEEEECSST
T ss_pred             CChHHhCHHHHHhcCCC-CEEEEecCC
Confidence            98644334567888997 899999863

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.68  E-value=9.5e-05  Score=63.53  Aligned_cols=103  Identities=18%  Similarity=0.216  Sum_probs=73.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +....++.++.+||.+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|....++...   .++.    +
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~----~  156 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIY----E  156 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGG----G
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchh----h
Confidence            55667888999999999886 888889998853 3399999999988887765    35322011111   2222    1


Q ss_pred             hcCC-CccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEec
Q 019535          219 MTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .... .+|+|+...+.+ ..++.+.+.|+++ |+++.+.
T Consensus       157 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          157 GIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             CCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            1233 799999766654 3589999999998 9998875

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.66  E-value=0.00078  Score=52.21  Aligned_cols=96  Identities=9%  Similarity=0.092  Sum_probs=66.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      ...+|+|+|.|.+|...++.++..|. +|+++++++++.+.+++.|...+. .+.    .-.+.+++..-..+|+++-++
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~----~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNA----ANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCT----TSHHHHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCC----CCHHHHHhcCcccCCEEEEEC
Confidence            35679999999999999999999999 999999999999999888875443 222    112233333222799999999


Q ss_pred             CCHHHHH---HHHHHhhcCCcEEEEe
Q 019535          232 GLASLVQ---EAYACCRKGWGKTIVL  254 (339)
Q Consensus       232 g~~~~~~---~~~~~l~~~~G~~v~~  254 (339)
                      +......   ...+.+.+. .+++..
T Consensus        80 ~~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            9765322   233444454 554443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.63  E-value=0.00022  Score=63.06  Aligned_cols=94  Identities=18%  Similarity=0.227  Sum_probs=71.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|+|+|.|.+|+.+++.++..|+ +|++.++++++.+.++++|.. +++.     .++.    ++. ...|+|+.+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~-----~~l~----~~l-~~aDvVi~~  222 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT-----DELK----EHV-KDIDICINT  222 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG-----GGHH----HHS-TTCSEEEEC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch-----hhHH----HHh-hCCCEEEEC
Confidence            368899999999999999999999999 999999998887777677764 3322     1222    222 258999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++....-+..+..++++ +.++.++..
T Consensus       223 ~p~~~i~~~~~~~mk~g-~~lin~a~g  248 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPK-TLILDLASR  248 (300)
T ss_dssp             CSSCCBCHHHHTTSCTT-CEEEECSST
T ss_pred             CChhhhCHHHHHhCCCC-CEEEEEeCC
Confidence            98644334567788897 899999864

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.60  E-value=0.00024  Score=65.35  Aligned_cols=92  Identities=17%  Similarity=0.145  Sum_probs=70.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|.. +.        ++.+.+.     ..|+|+.
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv--------~LeElL~-----~ADIVv~  308 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV--------TLDDAAS-----TADIVVT  308 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC--------CHHHHGG-----GCSEEEE
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec--------cHHHHHh-----hCCEEEE
Confidence            3468999999999999999999999999 999999888766555556653 21        2222221     4799999


Q ss_pred             cCCCHHHH-HHHHHHhhcCCcEEEEeccC
Q 019535          230 CVGLASLV-QEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       230 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +.++...+ ...+..|+++ ..++.+|..
T Consensus       309 atgt~~lI~~e~l~~MK~G-AILINvGRg  336 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDM-CIVGNIGHF  336 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTT-EEEEECSSS
T ss_pred             CCCCccccCHHHHhcCCCC-eEEEEcCCC
Confidence            99876543 5888999997 888888764

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.52  E-value=0.00014  Score=63.42  Aligned_cols=103  Identities=19%  Similarity=0.239  Sum_probs=72.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhc-----C--Cc--eEEeCCCCCCccHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF-----G--VT--EFVNSKNCGDKSVS  213 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~-----g--a~--~vi~~~~~~~~~~~  213 (339)
                      +...+.+.++.+||.+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  ..  .++..      +..
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~------d~~  163 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS------DLA  163 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS------CGG
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC------chH
Confidence            4566778899999999988 6888889998763 23999999999888777652     4  22  22221      221


Q ss_pred             HHHHHhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          214 QIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       214 ~~l~~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.  ....+.+|+|+.....+ ..++.+.+.|+++ |+++.+..
T Consensus       164 ~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          164 DS--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             GC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             hc--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            11  11123799999766544 5688999999997 99888754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.47  E-value=0.0014  Score=50.64  Aligned_cols=77  Identities=13%  Similarity=0.197  Sum_probs=57.7

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.|...+. .+.    .-.+.+++..-..+|++|.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~----~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADP----TDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCT----TCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCC----CCHHHHHhCCcccCCEEEEecC
Confidence            4579999999999999999999999 899999999998888877764332 222    1123344432237999999999


Q ss_pred             CHH
Q 019535          233 LAS  235 (339)
Q Consensus       233 ~~~  235 (339)
                      +..
T Consensus        80 ~~~   82 (141)
T 3llv_A           80 DDE   82 (141)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            755

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.43  E-value=0.00034  Score=58.07  Aligned_cols=101  Identities=18%  Similarity=0.212  Sum_probs=71.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +.....+.++++||.+|+|. |..++.+++. +. +|++++.+++..+.+++    +|..   .++..+.   .+   .+
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~---~~  117 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PA---AL  117 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TG---GG
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hh---hc
Confidence            44566788899999999985 8888888888 77 99999999998887754    3543   2333222   11   11


Q ss_pred             HHhcCCCccEEEEcCCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFECVGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..  .+.+|+||...+. ...++.+.+.|+++ |+++....
T Consensus       118 ~~--~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          118 AD--LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             TT--SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             cc--CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence            11  1279999965442 32689999999998 99988754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.43  E-value=0.00061  Score=52.60  Aligned_cols=76  Identities=16%  Similarity=0.320  Sum_probs=54.8

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+.. ++..+.   .+ .+.+.+...+++|+++.+++
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~-~~~~d~---~~-~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATH-AVIANA---TE-ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSE-EEECCT---TC-HHHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCE-EEEeCC---CC-HHHHHhcCCCCCCEEEECCC
Confidence            4579999999999999999999998 899999888877776666653 332222   12 23343331237999999999


Q ss_pred             CH
Q 019535          233 LA  234 (339)
Q Consensus       233 ~~  234 (339)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.41  E-value=0.0034  Score=53.63  Aligned_cols=103  Identities=11%  Similarity=0.058  Sum_probs=66.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      +++|||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+.. ..  .|..+  .+++.+.+.+...  |++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD--PLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            468999987 8999999999999999 999999998887776554432 22  23332  1223332322222  47999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          227 CFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +++++|..                         ...+.+++.|...+|++|.++...
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~  135 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR  135 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence            99988740                         123444445543239999987543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.37  E-value=0.00034  Score=65.29  Aligned_cols=98  Identities=17%  Similarity=0.223  Sum_probs=72.5

Q ss_pred             HHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +.+..+. -.|++++|+|+|.+|.++++.++..|+ +|+++++++.+.+.+...|++ +.+..     +        ...
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----e--------~~~  319 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----D--------VVS  319 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----G--------TTT
T ss_pred             HHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----H--------HHH
Confidence            3333333 368999999999999999999999999 999999998887777766652 21111     1        112


Q ss_pred             CccEEEEcCCCHHHH-HHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+|+++++.|....+ ...++.++++ +.++..|..
T Consensus       320 ~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          320 EADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             hcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            589999999875544 3478889997 888888764

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.34  E-value=0.001  Score=61.08  Aligned_cols=110  Identities=17%  Similarity=0.177  Sum_probs=77.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...         .++.+.+     ...|+++.+
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~---------~sL~eal-----~~ADVVilt  273 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV---------LLVEDVV-----EEAHIFVTT  273 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHT-----TTCSEEEEC
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee---------cCHHHHH-----hhCCEEEEC
Confidence            368999999999999999999999999 9999999887776666667532         1232222     148999988


Q ss_pred             CCCHHHHH-HHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEee
Q 019535          231 VGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  280 (339)
Q Consensus       231 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~  280 (339)
                      .++...+. ..++.|+++ ..++.++..    ...++...+..+..+..+.
T Consensus       274 ~gt~~iI~~e~l~~MK~g-AIVINvgRg----~vEID~~~L~~~~~~~~~i  319 (436)
T 3h9u_A          274 TGNDDIITSEHFPRMRDD-AIVCNIGHF----DTEIQVAWLKANAKERVEV  319 (436)
T ss_dssp             SSCSCSBCTTTGGGCCTT-EEEEECSSS----GGGBCHHHHHHHCSEEEEE
T ss_pred             CCCcCccCHHHHhhcCCC-cEEEEeCCC----CCccCHHHHHhhcCceEee
Confidence            87644333 667788887 888777632    2345555555544444443

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.30  E-value=0.00089  Score=55.26  Aligned_cols=103  Identities=15%  Similarity=0.130  Sum_probs=72.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +....+++++.+||.+|+|. |..++.+++..+..+|++++.+++..+.+++    .|..  .++..+.   .+   .+.
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~---~~~  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PE---GLD  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TT---TCT
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hh---hhh
Confidence            44566788999999999884 8888899888644499999999998888764    3432  2332221   11   111


Q ss_pred             HhcCCCccEEEEcCC---CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .  .+.+|+|+....   -...++.+.+.|+++ |+++....
T Consensus       105 ~--~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 D--LPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             T--SCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             c--CCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            1  136999997654   245588999999998 99988754

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.30  E-value=0.0015  Score=56.69  Aligned_cols=102  Identities=23%  Similarity=0.259  Sum_probs=70.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce---EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|...   ..|..+  .+++.+.+.+...  |++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN--LAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            5788899987 8999999999999999 999999998887665 5566432   223333  1223222232222  479


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |++++++|..                         ...+.++..|+.+ |++|.++..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~  161 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST  161 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence            9999988751                         1245566677776 999998754

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.29  E-value=0.0014  Score=55.33  Aligned_cols=99  Identities=13%  Similarity=0.093  Sum_probs=66.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|||.|+ |.+|..+++.+...|+ +|+++++++++.+.+...++..++..+-      .+.+.+.. +++|+||++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl------~~~~~~~~-~~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL------EEDFSHAF-ASIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT------TSCCGGGG-TTCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc------HHHHHHHH-cCCCEEEEC
Confidence            4678999987 9999999999999999 9999999999888777666612332221      12233332 279999999


Q ss_pred             CCCHH-------------HHHHHHHHhhc-CCcEEEEeccCC
Q 019535          231 VGLAS-------------LVQEAYACCRK-GWGKTIVLGVDQ  258 (339)
Q Consensus       231 ~g~~~-------------~~~~~~~~l~~-~~G~~v~~g~~~  258 (339)
                      +|...             ....+++.+.. +.+++|.++...
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            88521             12233333332 126899887654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.20  E-value=0.002  Score=54.87  Aligned_cols=104  Identities=15%  Similarity=0.158  Sum_probs=68.1

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      +-.|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+..+.-.+ ....|..+   .+-.+++.+.. +++|++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDiL   82 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL-PRLDVL   82 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC-SCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            346899999987 8999999999999999 99999998776543322111 12234333   33333333332 479999


Q ss_pred             EEcCCCH-----------------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          228 FECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       228 ~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      ++++|..                       ...+.++..|...+|++|.++...
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            9988741                       123455556654239999997643

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.17  E-value=0.00077  Score=57.25  Aligned_cols=105  Identities=14%  Similarity=0.088  Sum_probs=70.9

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...+..++.+||.+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+.
T Consensus        54 ~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~  129 (239)
T 2hnk_A           54 ILTKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL---GSALETLQVLI  129 (239)
T ss_dssp             HHHHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred             HHHHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHHHHHHH
Confidence            33445678899999987 4888899999874 2399999999988877765    35422111111   34444333331


Q ss_pred             --------------C-CCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEec
Q 019535          221 --------------D-GGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 --------------~-g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g  255 (339)
                                    . +.||+||......   ..++.+.+.|+++ |.++...
T Consensus       130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                          2 5799999765543   4478899999997 9988753

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.14  E-value=0.00044  Score=58.46  Aligned_cols=102  Identities=14%  Similarity=0.165  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~  218 (339)
                      ......++.+||.+|+| .|..++.+++..+..+|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        48 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~  120 (233)
T 2gpy_A           48 HLLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLF------GDALQLGEK  120 (233)
T ss_dssp             HHHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC------SCGGGSHHH
T ss_pred             HHHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------CCHHHHHHh
Confidence            33445678899999988 58888899988732399999999998887765    3532   2222      222222222


Q ss_pred             hc-CCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MT-DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~-~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .. .+.||+||.....   ...++.+.+.|+++ |+++...
T Consensus       121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             cccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            32 2479999865543   44578888999997 9988764

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.14  E-value=0.0027  Score=57.01  Aligned_cols=100  Identities=18%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCC-------------CCCccHHHHHH
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN-------------CGDKSVSQIII  217 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~-------------~~~~~~~~~l~  217 (339)
                      -.+++|.|+|.|.+|+.+++.++.+|+ +|++.+.++++.++.+.+|+..+ +..+             ....--.+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            478999999999999999999999999 89988888776556666765432 1110             00000011121


Q ss_pred             HhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+   +.++|+++++.+...+++.+.|..+ |.++.-+.
T Consensus       251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~Pd~  285 (355)
T 1c1d_A          251 TL---DCSVVAGAANNVIADEAASDILHAR-GILYAPDF  285 (355)
T ss_dssp             HC---CCSEECCSCTTCBCSHHHHHHHHHT-TCEECCHH
T ss_pred             hC---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEECCe
Confidence            21   4677777777666334667777776 76655443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.12  E-value=0.012  Score=50.41  Aligned_cols=78  Identities=17%  Similarity=0.292  Sum_probs=53.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      +++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  .+++.+.+.+...  
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK--KKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4788999987 8999999999999999 999999998876554    3455432   223333  2233333332222  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      |++|++++++|
T Consensus        83 G~iDiLVNNAG   93 (254)
T 4fn4_A           83 SRIDVLCNNAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.12  E-value=0.00039  Score=58.92  Aligned_cols=103  Identities=20%  Similarity=0.215  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.+...+.++.+||.+|+| .|..++.+++..+. +|++++.+++..+.+++    .|...+ ....   .+..   ..+
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~---~d~~---~~~  153 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNV-HVIL---GDGS---KGF  153 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSE-EEEE---SCGG---GCC
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEE---CCcc---cCC
Confidence            4555678889999999998 68899999998874 89999999988877755    343222 1111   1211   112


Q ss_pred             cCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+ +||+|+.+..-....+.+.+.|+++ |+++..-.
T Consensus       154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~~  190 (235)
T 1jg1_A          154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPVG  190 (235)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            223 5999997766555466889999997 98877643

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.10  E-value=0.002  Score=51.57  Aligned_cols=104  Identities=22%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE-EeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v-i~~~~~~~~~~~~~l~  217 (339)
                      +.....+.++.+||.+|+|. |..+..+++..+..+|++++.+++..+.+++    .+.. .+ +..+.      .+.+.
T Consensus        17 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~------~~~~~   89 (178)
T 3hm2_A           17 AISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA------PRAFD   89 (178)
T ss_dssp             HHHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT------TGGGG
T ss_pred             HHHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch------Hhhhh
Confidence            34556778899999999985 8888999888743499999999988888764    3443 23 22111      11111


Q ss_pred             HhcCCCccEEEEcCCC--HHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      . ..+.+|+|+.....  ...++.+.+.|+++ |+++....
T Consensus        90 ~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           90 D-VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             G-CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             c-cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            1 11479999965533  34689999999998 99987654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.09  E-value=0.0023  Score=54.95  Aligned_cols=102  Identities=17%  Similarity=0.197  Sum_probs=66.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++.. ..  .|..+  .+.+.+.+.+..  -+++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD--LNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            5788999987 8999999999999999 9999999988776654 34432 22  23333  122222222221  1379


Q ss_pred             cEEEEcCCCH----------H---------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA----------S---------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |++++++|..          .               ..+.++..++.+ |++|.++..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~  140 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSV  140 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence            9999988741          1               123344455565 899998754

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.09  E-value=0.0048  Score=51.74  Aligned_cols=103  Identities=17%  Similarity=0.159  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      ...+.+++.+||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|..  .+ ....   .+..+.+.
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i-~~~~---gda~~~l~  123 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRV-RFLL---SRPLDVMS  123 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGE-EEEC---SCHHHHGG
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcE-EEEE---cCHHHHHH
Confidence            333444556999999874 88899999987  45 99999999998877754    3433  22 2222   34444443


Q ss_pred             HhcCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+..+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       124 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn  163 (221)
T 3dr5_A          124 RLANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLAD  163 (221)
T ss_dssp             GSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETT
T ss_pred             HhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeC
Confidence            3334589999843332   33488899999997 9887743

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.09  E-value=0.0031  Score=51.42  Aligned_cols=100  Identities=20%  Similarity=0.256  Sum_probs=66.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCC---------CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGA---------TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~---------~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ++++.+||.+|+|+ |..+..+++..|.         .+|++++.++...     ......+...+....+..+.+.+..
T Consensus        20 ~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~   93 (196)
T 2nyu_A           20 LRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEVL   93 (196)
T ss_dssp             CCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHhc
Confidence            67899999999987 8899999999873         3899999887421     1112233111111133444455555


Q ss_pred             CC-CccEEEE-----cCCCH------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DG-GADYCFE-----CVGLA------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g-~~d~v~d-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+ .+|+|+.     +.+..            ..++.+.+.|+++ |+++....
T Consensus        94 ~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           94 PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            55 8999994     33321            4577889999998 99987643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.07  E-value=0.0057  Score=52.78  Aligned_cols=79  Identities=23%  Similarity=0.247  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. .++  |..+  .+.+.+.+.+...  +++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD--RKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 999999988776654 445543 222  3222  1222222222221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus       103 D~lvnnAg~  111 (266)
T 3grp_A          103 DILVNNAGI  111 (266)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.07  E-value=0.01  Score=50.94  Aligned_cols=103  Identities=23%  Similarity=0.337  Sum_probs=67.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceE---EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~v---i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+  .+++.+.+.+...  
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD--ELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            4788899987 8999999999999999 999999988765543    33453322   23222  1233333333322  


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHh--h-cCCcEEEEeccCC
Q 019535          222 GGADYCFECVGLA-------------------------SLVQEAYACC--R-KGWGKTIVLGVDQ  258 (339)
Q Consensus       222 g~~d~v~d~~g~~-------------------------~~~~~~~~~l--~-~~~G~~v~~g~~~  258 (339)
                      |++|++++++|..                         ...+.+++.|  + .+ |++|.++...
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~-G~IVnisS~~  148 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG-GKIINIGSLT  148 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEEECCGG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC-CEEEEEeehh
Confidence            3799999988751                         1244556656  2 44 8999998643

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.07  E-value=0.001  Score=56.91  Aligned_cols=103  Identities=14%  Similarity=0.075  Sum_probs=73.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhc-----CCce--EEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF-----GVTE--FVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~-----ga~~--vi~~~~~~~~~~~~~  215 (339)
                      +.....+.++.+||.+|+|. |..+..+++..+ ..+|++++.+++..+.+++.     |...  ++..      ++.+.
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~------d~~~~  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG------KLEEA  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES------CGGGC
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC------chhhc
Confidence            45567788999999999985 888899998863 23999999999988887653     5322  2221      21110


Q ss_pred             HHHhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          216 IIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        .+..+.+|+|+...+.. ..++.+.+.|+++ |+++.+..
T Consensus       161 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          161 --ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             --CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence              11223799999766554 5689999999997 99988753

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.07  E-value=0.00088  Score=57.32  Aligned_cols=103  Identities=15%  Similarity=0.135  Sum_probs=70.1

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCC-
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-  222 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g-  222 (339)
                      ...++.+||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .|...-+....   .+..+.+...... 
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~l~~~~~~~  135 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQSLESLGECP  135 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHTCCSCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHhcCCCC
Confidence            456788999999874 888888988874 3399999999998887765    35331111112   3455545554433 


Q ss_pred             CccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            89999932222   34588889999998 98877543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.06  E-value=0.013  Score=44.67  Aligned_cols=76  Identities=17%  Similarity=0.255  Sum_probs=53.9

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      .+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ ++... +..+.   .+ .+.+.+..-.++|+||.+++
T Consensus         5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~---~~-~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDC---TK-IKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCT---TS-HHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCC---CC-HHHHHHcCcccCCEEEEeeC
Confidence            479999999999999999988998 89999998888777654 46533 32221   11 12233322237999999998


Q ss_pred             CHH
Q 019535          233 LAS  235 (339)
Q Consensus       233 ~~~  235 (339)
                      ...
T Consensus        79 ~~~   81 (140)
T 1lss_A           79 KEE   81 (140)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            865

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.06  E-value=0.0034  Score=55.56  Aligned_cols=100  Identities=12%  Similarity=0.207  Sum_probs=72.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +.+..++.++.+||.+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |..   .++..      ++.   
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~---  150 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ------GWE---  150 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES------CGG---
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC------ChH---
Confidence            45556778899999999876 8888889888898 999999999988887653    321   22221      211   


Q ss_pred             HHhcCCCccEEEEc-----CCC---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          217 IDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       217 ~~~~~g~~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       ++ .+.+|+|+..     .+.   ...++.+.+.|+++ |+++.....
T Consensus       151 -~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          151 -DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             -GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             -HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence             11 2479999865     432   34578889999998 999887654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.04  E-value=0.005  Score=52.95  Aligned_cols=102  Identities=19%  Similarity=0.286  Sum_probs=64.2

Q ss_pred             CCCEEEEEcc-CH--HHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC--ceE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--TEF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~--iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga--~~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ |.  +|.+.++.+...|+ +|+.++++++..+.+++    .+.  ..+  .|..+  .+.+.+.+.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~   82 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN--DAEIETCFASIK   82 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS--SHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC--HHHHHHHHHHHH
Confidence            4678999986 56  99999998889999 89999887655444432    332  122  33333  233333333332


Q ss_pred             C--CCccEEEEcCCCHH-----------------------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          221 D--GGADYCFECVGLAS-----------------------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~--g~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .  +++|++++++|...                             ..+.++..+.++ |++|.++..
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  149 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYL  149 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEecc
Confidence            2  37999999886311                             233444555665 899998754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.03  E-value=0.0036  Score=54.32  Aligned_cols=79  Identities=23%  Similarity=0.349  Sum_probs=51.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC--c-eEE--eCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T-EFV--NSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga--~-~vi--~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |.+|..+++.+...|+ +|+++++++++.+.+.    ..+.  . .++  |..+  .+.+.+.+.+...
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999987 9999999999989999 8999999877655442    2332  1 122  3333  1222222222211


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|+++|.
T Consensus       108 ~~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          108 QHSGVDICINNAGL  121 (279)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hCCCCCEEEECCCC
Confidence              379999998873

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.02  E-value=0.0005  Score=56.83  Aligned_cols=132  Identities=17%  Similarity=0.256  Sum_probs=79.4

Q ss_pred             cccceEE-eeccceEEcCCCCCccccccccchhhhhhHHHHHhcC--CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEE
Q 019535          106 SFSEYTV-LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN--VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG  182 (339)
Q Consensus       106 ~~~~~~~-~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~--~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~  182 (339)
                      .|.+|.. .+....+.+++.+.+..+.. +    +... +.....  +.++.+||-+|+|. |..+..+++ .+..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~----~~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-Q----TTQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-H----HHHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-c----cHHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            5667766 66677888888776655421 1    1111 112222  56789999999875 777777776 45559999


Q ss_pred             EcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH---HHHHHHHHhhcCCcEEEE
Q 019535          183 VDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS---LVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       183 ~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~  253 (339)
                      ++.+++..+.+++    .+..  .++..+-   .+       ...+.+|+|+.......   .++.+.+.|+++ |+++.
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~  157 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---LA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIF  157 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---TT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---cc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEE
Confidence            9999988877765    2432  3333222   11       12247999996554332   255666788897 99888


Q ss_pred             ecc
Q 019535          254 LGV  256 (339)
Q Consensus       254 ~g~  256 (339)
                      ...
T Consensus       158 ~~~  160 (205)
T 3grz_A          158 SGI  160 (205)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            644

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.02  E-value=0.0053  Score=53.41  Aligned_cols=102  Identities=23%  Similarity=0.288  Sum_probs=63.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HH----HHHhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~----~~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.++++.+...|+ +|+.+++++++ .+    .+++.|.. ..+  |..+  .+++.+.+.+... 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 89998887643 22    22334533 222  3222  1222222222211 


Q ss_pred             -CCccEEEEcCCCH----------H---------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          222 -GGADYCFECVGLA----------S---------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 -g~~d~v~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       +++|++|+++|..          .               ..+.+++.+... |++|.++..
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence             3799999988741          1               134555566565 899998753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.01  E-value=0.0082  Score=51.49  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=52.3

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC--ceE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--TEF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga--~~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .|+++||.|+ |  ++|.+.++.+...|+ +|+.+.++++..+.+.    +++.  ...  .|..+  .++..+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS--DEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence            5788999986 4  799999999999999 9999999877665543    3342  222  23333  223333332222


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  |++|++++++|.
T Consensus        82 ~~~G~iD~lvnnAg~   96 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAF   96 (256)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HHhCCCCEEEecccc
Confidence            1  479999998773

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.01  E-value=0.00063  Score=56.63  Aligned_cols=101  Identities=17%  Similarity=0.229  Sum_probs=71.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~  215 (339)
                      +.....+.++.+||.+|+| .|..+..+++..|  . +|++++.+++..+.+++    .+...  ++..      +... 
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~~-  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVG------DGTL-  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEES------CGGG-
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC------Cccc-
Confidence            4556678899999999998 4888999998886  5 99999999988877765    24322  2221      1111 


Q ss_pred             HHHhc-CCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          216 IIDMT-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~-~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        ... .+.+|+|+....-....+.+.+.|+++ |+++..-.
T Consensus       140 --~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          140 --GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             --CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             --CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence              111 237999998766555457889999997 99887743

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.00  E-value=0.0055  Score=53.70  Aligned_cols=102  Identities=18%  Similarity=0.236  Sum_probs=65.1

Q ss_pred             CCCEEEEEcc-CH--HHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~--iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+ |.  +|.+.++.+...|+ +|+.++++++..+.++    +.+....+  |..+  .+.+.+.+.+..  
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  106 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD--AASIDAVFETLEKK  106 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHh
Confidence            5788999986 55  99999999999999 8999998865444332    23432332  3333  122222222221  


Q ss_pred             CCCccEEEEcCCCHH-----------------------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          221 DGGADYCFECVGLAS-----------------------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       221 ~g~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      -+++|++|+++|...                             ..+.++..+... |++|.++..
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~  171 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYY  171 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeeh
Confidence            137999999887421                             234555566676 999998754

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.00  E-value=0.0031  Score=55.46  Aligned_cols=100  Identities=16%  Similarity=0.243  Sum_probs=73.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +....+++++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++.      .++.   
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~------~d~~---  132 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI------QGWE---  132 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE------CCGG---
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------CCHH---
Confidence            45666788999999999985 8888999998887 99999999998887765    3422   2222      1221   


Q ss_pred             HHhcCCCccEEEEcCC-----C----------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          217 IDMTDGGADYCFECVG-----L----------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g-----~----------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       ++ .+.+|+|+....     .          ...++.+.+.|+++ |++++....
T Consensus       133 -~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  185 (302)
T 3hem_A          133 -EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT  185 (302)
T ss_dssp             -GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEE
T ss_pred             -Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEe
Confidence             12 458999986321     1          25588999999998 999987654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.99  E-value=0.0084  Score=49.88  Aligned_cols=99  Identities=8%  Similarity=0.018  Sum_probs=63.1

Q ss_pred             CEEEEEcc-CHHHHHHHHHHH-HcCCCEEEEEcCChh-HHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGAR-LCGATRIIGVDVISE-KFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~-~~G~~~Vi~~~~~~~-~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ++|||.|+ |.+|...++.+. ..|+ +|++++++++ +.+.+...+. ..++..+-   .+ .+.+.+... ++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~d-~~~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF---QN-PGXLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT---TC-HHHHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC---CC-HHHHHHHHc-CCCEEEE
Confidence            46999987 999999998887 8999 9999999887 6555432221 22332221   11 223333332 6899999


Q ss_pred             cCCCHH-HHHHHHHHhhcC-CcEEEEeccCC
Q 019535          230 CVGLAS-LVQEAYACCRKG-WGKTIVLGVDQ  258 (339)
Q Consensus       230 ~~g~~~-~~~~~~~~l~~~-~G~~v~~g~~~  258 (339)
                      ++|... ..+.+++.+... .+++|.++...
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            998632 144555555543 25888887643

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.99  E-value=0.0089  Score=51.21  Aligned_cols=79  Identities=24%  Similarity=0.275  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.++++.++.+.+ ++++.. ..  .|..+  .+.+.+.+.+..  -+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR--QDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 899999988776554 344432 22  23333  122333333222  2379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        84 d~lv~~Ag~   92 (259)
T 4e6p_A           84 DILVNNAAL   92 (259)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.99  E-value=0.0065  Score=52.42  Aligned_cols=79  Identities=23%  Similarity=0.305  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCce-E--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~-v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    ..+... .  .|..+  .+.+.+.+.+...  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            3678999987 8999999999999999 8999999887765542    234322 1  23333  1222222222221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.99  E-value=0.00087  Score=55.50  Aligned_cols=101  Identities=16%  Similarity=0.049  Sum_probs=70.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +.+...++++.+||.+|+|. |..+..+++. +. +|++++.+++..+.+++    .+..  .++..+      ..+...
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~~  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD------GWQGWQ  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGGCCG
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC------cccCCc
Confidence            45667788999999999874 8888888887 66 99999999998887764    3432  222222      111111


Q ss_pred             HhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        ..+.||+|+....-....+.+.+.|+++ |+++..-.
T Consensus       140 --~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  175 (210)
T 3lbf_A          140 --ARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPVG  175 (210)
T ss_dssp             --GGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEEC
T ss_pred             --cCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEEc
Confidence              1237999997655444456788999997 98877643

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.98  E-value=0.0073  Score=51.93  Aligned_cols=103  Identities=12%  Similarity=0.060  Sum_probs=65.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH---HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG---KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+   ++.+.. .  ..|..+  .+++.+.+.+...  |
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            4788999987 8999999999999999 899999887654443   333422 2  233333  1223333332222  4


Q ss_pred             CccEEEEcCCCH------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECVGLA------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~g~~------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++|++++++|..                        ...+.++..|...+|++|.++..
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            799999998741                        12344555554323999998753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.97  E-value=0.012  Score=50.49  Aligned_cols=79  Identities=22%  Similarity=0.278  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.++++.++.+.+.    +.+.. .+  .|..+  .+.+.+.+.+..  .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH--SDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 8999999999889999 8999999887765542    23432 22  23333  122222232221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +.+|++|+++|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.96  E-value=0.0057  Score=52.28  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEE--eCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..+  |..+  .+.+.+.+.+..  -+++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSS--EADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTC--HHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            3678999987 8999999999989999 899999988776554 334432 222  2222  122222222221  1368


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        82 d~lv~~Ag~   90 (253)
T 1hxh_A           82 NVLVNNAGI   90 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.95  E-value=0.0018  Score=54.76  Aligned_cols=101  Identities=18%  Similarity=0.238  Sum_probs=68.9

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhc----C-CceEEeCCCCCCccHHHHHHHh
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----G-VTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~----g-a~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +...+++|++||-+|+|+ |..+..+|+..|.+ +|++++.+++..+.+++.    + ...+.. +.   .+. +.. ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~-d~---~~p-~~~-~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILG-DA---RFP-EKY-RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEES-CT---TCG-GGG-TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEE-ec---cCc-ccc-cc
Confidence            456799999999999874 88999999988753 899999999988877553    2 222322 22   111 000 11


Q ss_pred             cCCCccEEEEcCCCH----HHHHHHHHHhhcCCcEEEEe
Q 019535          220 TDGGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ..+.+|+||....-+    ..+.++.+.|+++ |++++.
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            123789998655432    3477788899998 998875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.94  E-value=0.0092  Score=52.01  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=52.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC----ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV----TEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga----~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      -.+.++||+|+|++|.+++..+...|+++|+++.+++++.+.+ ++++.    ..+.....   +++.+.+.+     +|
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~-----~D  196 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAA-----AD  196 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHH-----SS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhc-----CC
Confidence            3578999999999999999999999997899999998877654 33321    12211121   244444433     79


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      +||+|++.
T Consensus       197 iVInaTp~  204 (283)
T 3jyo_A          197 GVVNATPM  204 (283)
T ss_dssp             EEEECSST
T ss_pred             EEEECCCC
Confidence            99999864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.94  E-value=0.0082  Score=51.14  Aligned_cols=79  Identities=27%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++..   ...|..+  .+++.+.+.+...  +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 99999998877665533 3321   2233333  1223333332221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.93  E-value=0.014  Score=48.92  Aligned_cols=78  Identities=15%  Similarity=0.121  Sum_probs=51.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEE--eCCCCCCccHHHHHHHhc--CCCccE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV--NSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi--~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+. +++...++  |..+  .+.+.+.+.+..  -+++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE--EGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            567999987 9999999999999999 8999999887766543 33322222  3332  122222222221  137999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|+++|.
T Consensus        82 li~~Ag~   88 (234)
T 2ehd_A           82 LVNNAGV   88 (234)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.93  E-value=0.01  Score=52.12  Aligned_cols=79  Identities=25%  Similarity=0.317  Sum_probs=53.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    ..+.. .+  .|..+  .+.+.+.+.+...  
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH--LDEMVRLADEAFRLL  106 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhC
Confidence            5789999987 8999999999999999 8999999987765542    23432 22  23333  1223233332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999883

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.92  E-value=0.013  Score=53.13  Aligned_cols=94  Identities=18%  Similarity=0.151  Sum_probs=67.6

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      -+|+|+|+|.+|..+++.+.. .. .|.+.+++.++.+.+++......+|..+      .+.+.++.. +.|+|++|++.
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~~-~~DvVi~~~p~   87 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVMK-EFELVIGALPG   87 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHHT-TCSEEEECCCG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHHh-CCCEEEEecCC
Confidence            369999999999998887754 45 8888899988888887654333344433      223444332 58999999998


Q ss_pred             HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          234 ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       234 ~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ......+..|+..+ -.++.+...
T Consensus        88 ~~~~~v~~~~~~~g-~~yvD~s~~  110 (365)
T 3abi_A           88 FLGFKSIKAAIKSK-VDMVDVSFM  110 (365)
T ss_dssp             GGHHHHHHHHHHHT-CEEEECCCC
T ss_pred             cccchHHHHHHhcC-cceEeeecc
Confidence            76567777788886 788887643

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.92  E-value=0.0047  Score=51.41  Aligned_cols=92  Identities=14%  Similarity=0.153  Sum_probs=62.8

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+...+...+ .|..+   .+.    ..+  +++|+||++++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~----~~~--~~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE----ADL--DSVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH----HHH--TTCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH----hhc--ccCCEEEECCc
Confidence            5899987 9999999999999999 99999999887766544444332 23322   222    111  36899999997


Q ss_pred             CH----------HHHHHHHHHhhcCCcEEEEecc
Q 019535          233 LA----------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~----------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..          .....+++.+....+++|.++.
T Consensus        72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            62          2245566666553268888853

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.92  E-value=0.011  Score=49.89  Aligned_cols=78  Identities=13%  Similarity=0.211  Sum_probs=51.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCcc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGAD  225 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~d  225 (339)
                      +.++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.. ..  .|..+  .+.+.+.+.+..  .+++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH--HEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS--HHHHHHHHHHHHHHHCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHhcCCCc
Confidence            468999987 8999999999989999 99999999887666533 3321 12  23333  122222222222  13799


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++++++|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99998874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.92  E-value=0.011  Score=51.59  Aligned_cols=87  Identities=16%  Similarity=0.201  Sum_probs=62.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|...   .     .+..+.+..     .|+||-|++.
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~-----~~~~~~~~~-----aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAER---A-----ATPCEVVES-----CPVTFAMLAD   67 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---C-----SSHHHHHHH-----CSEEEECCSS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee---c-----CCHHHHHhc-----CCEEEEEcCC
Confidence            478999999999999999999999 9999999999988887776531   1     233343333     6899999987


Q ss_pred             HHHHHHHH-------HHhhcCCcEEEEec
Q 019535          234 ASLVQEAY-------ACCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~-------~~l~~~~G~~v~~g  255 (339)
                      +...+..+       ..+.++ ..++..+
T Consensus        68 ~~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           68 PAAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            54454444       455664 5555554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.92  E-value=0.0076  Score=52.18  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..+  |..+  .+.+.+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD--PDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678899987 8999999999999999 899999988776655 334422 222  3333  1222232322211  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.91  E-value=0.0037  Score=53.19  Aligned_cols=82  Identities=22%  Similarity=0.182  Sum_probs=53.5

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      ..++++|||.|+ |.+|...++.+...|+ +|+.+++++++.+.+. .+.....+..-+....+-.+.+.+.. +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT-SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC-SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc-CCCCEE
Confidence            346789999987 8999999999999999 9999999888776653 34332222222211122222222222 379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        89 i~~Ag~   94 (249)
T 3f9i_A           89 VCNAGI   94 (249)
T ss_dssp             EECCC-
T ss_pred             EECCCC
Confidence            998874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.90  E-value=0.0075  Score=49.93  Aligned_cols=92  Identities=13%  Similarity=0.201  Sum_probs=63.2

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. .+...+ .|..+   .+.    ..+  +++|+||+++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~----~~~--~~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL----SDL--SDQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH----HHH--TTCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh----hhh--cCCCEEEECCc
Confidence            5899987 9999999999999999 9999999988776554 333322 22222   222    122  36899999998


Q ss_pred             CH--------HHHHHHHHHhhcC-CcEEEEeccC
Q 019535          233 LA--------SLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       233 ~~--------~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      ..        .....+++.+... .++++.++..
T Consensus        71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            63        2345666666653 2688887653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.90  E-value=0.0099  Score=50.94  Aligned_cols=79  Identities=22%  Similarity=0.308  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHHH-hc----CCc-eEE--eCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGK-RF----GVT-EFV--NSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~-~~----ga~-~vi--~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++ .+.+. ++    +.. ..+  |..+  .+.+.+.+.+...
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   79 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            3578899987 8999999999999999 89999988766 44332 22    432 222  3222  1222222222211


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|+++|.
T Consensus        80 ~~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence              379999998873

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.90  E-value=0.0058  Score=53.39  Aligned_cols=77  Identities=26%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .++++||.|+ |.+|.++++.+...|+ +|+.+++++++.+.+.+ ++.. ..  .|..+   .+-.+.+.+.. +++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQD---LSSVRRFADGV-SGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTC---HHHHHHHHHTC-CCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC---HHHHHHHHHhc-CCCCE
Confidence            4788999987 8999999999999999 99999999887766543 4432 22  23222   22222222222 47999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|+++|.
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.89  E-value=0.0088  Score=51.92  Aligned_cols=79  Identities=20%  Similarity=0.381  Sum_probs=53.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..  .|..+  .+.+.+.+.+...  +++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD--EQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC--HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 999999988776654 344432 22  23333  1222222322211  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus       105 D~lvnnAg~  113 (277)
T 3gvc_A          105 DKLVANAGV  113 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.89  E-value=0.0058  Score=53.64  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    +.+....+  |..+  .+.+.+.+.+... 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD--AESVDNMFKVLAEE  105 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4688999987 5  999999999989999 8999998875544443    33433333  3333  1223333332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus       106 ~g~iD~lVnnAG~  118 (296)
T 3k31_A          106 WGSLDFVVHAVAF  118 (296)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998874

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.87  E-value=0.002  Score=54.04  Aligned_cols=105  Identities=16%  Similarity=0.153  Sum_probs=69.7

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..+..++.+||.+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+..
T Consensus        64 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~~~~~~~  139 (229)
T 2avd_A           64 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLA  139 (229)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHH
T ss_pred             HHHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHHHHHHHHh
Confidence            3445678899999987 6888889998763 3399999999988877764    34311111111   344444444321


Q ss_pred             ----CCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          222 ----GGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 ----g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                          +.+|+||-....   ...++.+.+.|+++ |.++....
T Consensus       140 ~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          140 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence                479999854332   34588999999997 98887643

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.86  E-value=0.0058  Score=52.44  Aligned_cols=79  Identities=24%  Similarity=0.302  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----C-CceEE--eCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----G-VTEFV--NSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~-----g-a~~vi--~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++     + ...++  |..+  .+.+.+.+.+...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE--PGDIDRLFEKARD   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999989999 8999999887655432 22     3 12222  3333  1223333333332


Q ss_pred             C-CccEEEEcCCC
Q 019535          222 G-GADYCFECVGL  233 (339)
Q Consensus       222 g-~~d~v~d~~g~  233 (339)
                      . ++|++|+++|.
T Consensus        83 ~~gid~lv~~Ag~   95 (260)
T 2z1n_A           83 LGGADILVYSTGG   95 (260)
T ss_dssp             TTCCSEEEECCCC
T ss_pred             hcCCCEEEECCCC
Confidence            2 49999998873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.86  E-value=0.0089  Score=51.42  Aligned_cols=102  Identities=21%  Similarity=0.189  Sum_probs=63.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc-----CCc-eEE--eCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EFV--NSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~vi--~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +++     +.. ..+  |..+  .+.+.+.+.... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 999999987765443 222     111 222  3332  122223232221 


Q ss_pred             -CCCccEEEEcCCCHH-----------------HHHHHHHHhhc-----CCcEEEEeccC
Q 019535          221 -DGGADYCFECVGLAS-----------------LVQEAYACCRK-----GWGKTIVLGVD  257 (339)
Q Consensus       221 -~g~~d~v~d~~g~~~-----------------~~~~~~~~l~~-----~~G~~v~~g~~  257 (339)
                       -+++|++|+++|...                 ..+.+++.+..     . |++|.++..
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence             137999999987410                 13344555543     4 889988754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.84  E-value=0.014  Score=50.17  Aligned_cols=79  Identities=20%  Similarity=0.367  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.+     .+.. ..  .|..+  .+.+.+.+.+... 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 89999998877654421     3432 22  33333  2333333333222 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        96 ~g~id~lv~nAg~  108 (266)
T 4egf_A           96 FGGLDVLVNNAGI  108 (266)
T ss_dssp             HTSCSEEEEECCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.84  E-value=0.013  Score=50.83  Aligned_cols=79  Identities=22%  Similarity=0.147  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-g  222 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|..+  .....+.+.+... +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999987 8999999999999999 999999987665443    223432 22  23333  2223322222211 5


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998884

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.84  E-value=0.013  Score=50.37  Aligned_cols=79  Identities=25%  Similarity=0.363  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    +.|.. .+  .|..+  .+.+.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999999999999 8999999877665432    22432 22  23333  1222222222211  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.84  E-value=0.0097  Score=50.83  Aligned_cols=75  Identities=13%  Similarity=0.001  Sum_probs=49.7

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH---hcCCceEEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK---RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~---~~ga~~vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      +++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.   ..+.....- +.   +++.+.+.+...  +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~---~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SE---QEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CC---CSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CH---HHHHHHHHHHHHHhCCCCEE
Confidence            36888987 8999999999999999 8999998877655443   234322211 22   334333333221  379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998874

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.83  E-value=0.0082  Score=52.16  Aligned_cols=99  Identities=11%  Similarity=0.151  Sum_probs=70.4

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC---ceEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV---TEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga---~~vi~~~~~~~~~~~~~l  216 (339)
                      +....++.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |.   ..++..      ++    
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~------d~----  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA------GW----  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES------CG----
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC------Ch----
Confidence            44556778899999999875 7888888877898 999999999988877653    32   122221      22    


Q ss_pred             HHhcCCCccEEEEc-----CC---CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFEC-----VG---LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~-----~g---~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .++. +.+|+|+..     .+   -...++.+.+.|+++ |++++...
T Consensus       124 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          124 EQFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GGCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hhCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            1121 579999854     22   134588999999998 99988654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.83  E-value=0.018  Score=49.51  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=51.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hc--CCc-eEE--eCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RF--GVT-EFV--NSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~--ga~-~vi--~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    ..  +.. ..+  |..+   .+..+.+.+.. 
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT---EQGCQDVIEKY-   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS---HHHHHHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC---HHHHHHHHHhc-
Confidence            4678899987 8999999999999999 9999999887654432    22  221 112  2222   33333333322 


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus        84 g~id~lv~nAg~   95 (267)
T 3t4x_A           84 PKVDILINNLGI   95 (267)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.83  E-value=0.0051  Score=52.67  Aligned_cols=78  Identities=21%  Similarity=0.298  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE--eCCCCCCccHHHHHHHhc--CCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi--~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+..+++.. ..+  |..+  .+.+.+.+.+..  .+++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED--ERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            3678999987 8999999999999999 89999988776333344432 333  3332  122333333221  137999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|+++|.
T Consensus        81 lv~~Ag~   87 (256)
T 2d1y_A           81 LVNNAAI   87 (256)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.82  E-value=0.0074  Score=51.40  Aligned_cols=79  Identities=23%  Similarity=0.334  Sum_probs=53.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceE---EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF---VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~v---i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+  .+.+.+.+.+...  +++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISD--PGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCCCC
Confidence            4678999987 8999999999999999 999999988776654 34553322   22222  1222222222211  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        82 d~lv~nAg~   90 (247)
T 3rwb_A           82 DILVNNASI   90 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998884

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.82  E-value=0.011  Score=50.54  Aligned_cols=78  Identities=18%  Similarity=0.132  Sum_probs=50.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhc--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    ..+.. ..+  |..+  .+.+.+.+.+..  -+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            467999987 8999999999999999 8999999877655432    23432 222  3333  122222232221  24


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus        79 ~id~lv~nAg~   89 (256)
T 1geg_A           79 GFDVIVNNAGV   89 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.81  E-value=0.013  Score=50.60  Aligned_cols=79  Identities=19%  Similarity=0.249  Sum_probs=52.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.. .  ..|..+  .+.+.+.+.+...  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            4678899987 8999999999999999 9999999887665442    23422 2  233333  1222232332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       104 g~iD~lvnnAg~  115 (270)
T 3ftp_A          104 GALNVLVNNAGI  115 (270)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.81  E-value=0.011  Score=52.86  Aligned_cols=134  Identities=15%  Similarity=0.161  Sum_probs=80.3

Q ss_pred             CEEEEEccCHHHHHHHHHHH-Hc-CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEE
Q 019535          154 STVVIFGLGSIGLAVAEGAR-LC-GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  228 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~-~~-G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~  228 (339)
                      -+|.|+|+|.+|...++.++ .. ++ +++ +.++++++.+. ++++|...+++       ++.+    +... .+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~----~l~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT-------NYKD----MIDTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES-------CHHH----HHTTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC-------CHHH----HhcCCCCCEEE
Confidence            47999999999998887776 43 66 554 55777777654 45577654442       3322    2333 799999


Q ss_pred             EcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccc--ccHHHHh-hc-CCeEEeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          229 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS--LSSFEVL-HS-GKILMGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~-~~-~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      .|++.....+.+..++..  |+.|++..+. .....  ..+.... .+ ++.+....  .......+..+.+++.+|++-
T Consensus        77 i~tp~~~h~~~~~~al~~--G~~v~~eKp~-~~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNA--GLNVFCEKPL-GLDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHT--TCEEEECSCC-CSCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTTTTC
T ss_pred             EeCChHhHHHHHHHHHHC--CCEEEEcCCC-CCCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcCCCC
Confidence            999988778888888887  5666664321 11111  1111222 23 44443221  111223578888888888663

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.81  E-value=0.0041  Score=53.24  Aligned_cols=103  Identities=16%  Similarity=0.188  Sum_probs=72.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc----eEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT----EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~----~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.....+.++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++....    .++..+-   .++     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            4556678889999999987 58888888887788 999999999999998875421    2222221   110     11


Q ss_pred             cCCCccEEEEcCC--------CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFECVG--------LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..+.+|+|+....        -...++.+.+.|+++ |+++.....
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  161 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDYC  161 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEec
Confidence            2237999996432        123478889999997 999887643

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.81  E-value=0.006  Score=53.99  Aligned_cols=92  Identities=21%  Similarity=0.201  Sum_probs=62.3

Q ss_pred             CEEEEEccCHHHHHHHHHHHH--cCCCEEEEEcCChhH--HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEE
Q 019535          154 STVVIFGLGSIGLAVAEGARL--CGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  228 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~--~G~~~Vi~~~~~~~~--~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~  228 (339)
                      -+|.|+|+|.+|...+..+..  -+.+.+.+.++++++  .+.++++|.... .      .+ .+.+.+.+.+ ++|+||
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~-~------~~-~e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT-Y------AG-VEGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE-S------SH-HHHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc-c------CC-HHHHHhccCCCCCcEEE
Confidence            479999999999988887743  466334455556555  566677886421 1      12 3334343333 799999


Q ss_pred             EcCCCHHHHHHHHHHhhc--CCcEEEEe
Q 019535          229 ECVGLASLVQEAYACCRK--GWGKTIVL  254 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~--~~G~~v~~  254 (339)
                      +|++.....+.+..++..  + .++++.
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~e  103 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLIDL  103 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEEc
Confidence            999977767888888887  7 676663

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.81  E-value=0.013  Score=50.09  Aligned_cols=77  Identities=22%  Similarity=0.291  Sum_probs=48.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCce-EE--eCCCCCCccHHHHHHHhcC--CCc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~ga~~-vi--~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+++++++++  .+.+++.+... .+  |..+  .+.+.+.+.+...  +++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD--VAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS--HHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC--HHHHHHHHHHHHHHcCCC
Confidence            578999987 8999999999999999 89999887652  12233334322 22  2222  1222222322211  379


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++|+++|
T Consensus        81 d~lv~~Ag   88 (255)
T 2q2v_A           81 DILVNNAG   88 (255)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.80  E-value=0.015  Score=49.75  Aligned_cols=41  Identities=20%  Similarity=0.162  Sum_probs=35.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999987 8999999999888999 999999988776554

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.018  Score=49.69  Aligned_cols=101  Identities=24%  Similarity=0.364  Sum_probs=63.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHH----HhcCCce-EE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~----~~~ga~~-vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++ .++.+.+    ++.|... .+  |..+  .+.+.+.+.+... 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD--AEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4778999987 8999999999999999 88887544 3443332    3345332 22  3332  1223333332221 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 -GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 -g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +++|++++++|..                         ...+.+++.+... |++|.++.
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS  166 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS  166 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence             3799999988741                         1244555666676 99999875

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.78  E-value=0.013  Score=51.22  Aligned_cols=86  Identities=17%  Similarity=0.175  Sum_probs=61.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|...   .     .++.+.+.     .+|+||.|++.+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A-----STAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHh-----CCCEEEEECCCH
Confidence            69999999999999988888898 8999999998888887766421   1     23333332     379999999976


Q ss_pred             HHHHHHH-------HHhhcCCcEEEEec
Q 019535          235 SLVQEAY-------ACCRKGWGKTIVLG  255 (339)
Q Consensus       235 ~~~~~~~-------~~l~~~~G~~v~~g  255 (339)
                      ...+..+       ..+.++ ..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            5455444       456665 5565554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.77  E-value=0.0048  Score=52.72  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=52.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--C--CceE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--G--VTEF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--g--a~~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .  +  ...+  .|..+  .+.+.+.+.+..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   82 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD--CTKADTEIKDIH   82 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC--HHHHHHHHHHHH
Confidence            4678999987 8999999999888999 99999999877655432    1  2  1222  23333  122223333222


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  +++|++++++|.
T Consensus        83 ~~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           83 QKYGAVDILVNAAAM   97 (250)
T ss_dssp             HHHCCEEEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            1  379999999874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.77  E-value=0.012  Score=52.00  Aligned_cols=87  Identities=16%  Similarity=0.156  Sum_probs=62.5

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+..   .     .+..+.+..     .|+||-|++.
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~---~-----~~~~~~~~~-----aDvvi~~vp~   87 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASV---C-----ESPAEVIKK-----CKYTIAMLSD   87 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---C-----SSHHHHHHH-----CSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeE---c-----CCHHHHHHh-----CCEEEEEcCC
Confidence            579999999999999999999999 9999999999988888777532   1     233333333     6899988887


Q ss_pred             HHHHHHHH-------HHhhcCCcEEEEec
Q 019535          234 ASLVQEAY-------ACCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~-------~~l~~~~G~~v~~g  255 (339)
                      +..++..+       ..+.++ ..++..+
T Consensus        88 ~~~~~~v~~~~~~l~~~l~~g-~~vv~~s  115 (310)
T 3doj_A           88 PCAALSVVFDKGGVLEQICEG-KGYIDMS  115 (310)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHhCchhhhhccCCC-CEEEECC
Confidence            65455544       234453 4555554

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.77  E-value=0.011  Score=52.12  Aligned_cols=88  Identities=25%  Similarity=0.269  Sum_probs=65.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.++++++ +.+.++|+..+         ++.+.+.     ..|+|+.++
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~-----~aDvV~l~~  204 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK-----ESDVVTIHV  204 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh-----hCCEEEEec
Confidence            47899999999999999999999999 99999998776 55666776321         2223232     279999888


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...    .+ ...+..++++ ..++.++.
T Consensus       205 p~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          205 PLVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            7422    12 3567889997 88888865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.76  E-value=0.016  Score=48.88  Aligned_cols=77  Identities=17%  Similarity=0.169  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      .++++||.|+ |.+|...++.+...|+ +|+++++++++.+.+. ++....++..+-   .+ .+.+.+...  +++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL---GD-WEATERALGSVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TC-HHHHHHHHTTCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC---CC-HHHHHHHHHHcCCCCEE
Confidence            4678999987 8999999999999999 8999999887766543 332223332221   11 122333322  379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.75  E-value=0.0093  Score=51.48  Aligned_cols=88  Identities=14%  Similarity=0.143  Sum_probs=63.4

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +.+++|+|+|++|.+++..+...|. +|+++.|++++.+.+.+++. .+...++     +       .  .+|+||+|++
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~-~~~~~~~-----l-------~--~~DiVInaTp  181 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGC-DCFMEPP-----K-------S--AFDLIINATS  181 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTC-EEESSCC-----S-------S--CCSEEEECCT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCC-eEecHHH-----h-------c--cCCEEEEccc
Confidence            8899999999999999999999995 99999999988766657774 3333333     1       0  5899999886


Q ss_pred             CH-----H-HHHHHHHHhhcCCcEEEEeccC
Q 019535          233 LA-----S-LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       233 ~~-----~-~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..     . ..+.+...++++ ..++++...
T Consensus       182 ~Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY~  211 (269)
T 3phh_A          182 ASLHNELPLNKEVLKGYFKEG-KLAYDLAYG  211 (269)
T ss_dssp             TCCCCSCSSCHHHHHHHHHHC-SEEEESCCS
T ss_pred             CCCCCCCCCChHHHHhhCCCC-CEEEEeCCC
Confidence            42     1 122223367776 777777643

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.74  E-value=0.0014  Score=55.59  Aligned_cols=97  Identities=13%  Similarity=0.137  Sum_probs=67.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC----c-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----T-EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga----~-~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ..+|.+||-+|+| .|..+..+++..+. ++++++.+++..+.+++...    . .++.      .++.+.+..+..+.|
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe------ehHHhhcccccccCC
Confidence            3678999999987 47888888877666 89999999998888876431    1 2222      234343334444489


Q ss_pred             cEEE-EcCCC----------HHHHHHHHHHhhcCCcEEEEec
Q 019535          225 DYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       225 d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |.|+ |+...          ...++++.++|+|+ |+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            9985 65533          23467889999998 9998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.73  E-value=0.0074  Score=51.29  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceE-EeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++|...+ .|..+  .+.+.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            3578999987 8999999999999999 9999999887766543 3453222 23333  1222232322211  36999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +|+++|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.73  E-value=0.015  Score=50.75  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=49.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHH----HhcCCce-EE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~----~~~ga~~-vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++.++ .+.+    ++.+... .+  |..+  .+.+.+.+.+... 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD--EQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4788999987 8999999999999999 89999887653 2222    3344332 22  3332  1222222322221 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +++|++|+++|
T Consensus       123 ~g~iD~lvnnAg  134 (291)
T 3ijr_A          123 LGSLNILVNNVA  134 (291)
T ss_dssp             HSSCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999876

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.73  E-value=0.0081  Score=53.31  Aligned_cols=78  Identities=12%  Similarity=0.152  Sum_probs=52.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC--c-eE--EeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T-EF--VNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga--~-~v--i~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ |.+|..+++.+...|+ +|+++++++++.+.+.+    .+.  . .+  .|..+  .+.+.+.+.... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   83 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS--REGFKMAADEVEA   83 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999989999 89999999877655422    232  1 22  23333  122333333221 


Q ss_pred             -CCCccEEEEcCC
Q 019535          221 -DGGADYCFECVG  232 (339)
Q Consensus       221 -~g~~d~v~d~~g  232 (339)
                       .+++|++|+++|
T Consensus        84 ~~g~id~lv~nAg   96 (319)
T 3ioy_A           84 RFGPVSILCNNAG   96 (319)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence             247999999988

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.72  E-value=0.011  Score=50.72  Aligned_cols=95  Identities=22%  Similarity=0.353  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      +.++.+||.+|+|. |..++.+++ .|. +|++++.++...+.+++    .+.. .++.      .++.+.   +..+.+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~~~f  185 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGCCE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcCCCC
Confidence            57889999999875 777777666 588 99999999998877765    3432 2221      233332   223489


Q ss_pred             cEEEEcCCC---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+|+.....   ...++.+.+.|+++ |++++.+..
T Consensus       186 D~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            999965432   23477888899997 999987654

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.69  E-value=0.003  Score=53.37  Aligned_cols=102  Identities=18%  Similarity=0.182  Sum_probs=68.9

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ....++.+||.+|+| .|..++.+++..  +. +|++++.+++..+.+++    .|...-+....   .+..+.+.++..
T Consensus        68 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~  142 (232)
T 3cbg_A           68 ISLTGAKQVLEIGVF-RGYSALAMALQLPPDG-QIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQ  142 (232)
T ss_dssp             HHHHTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHT
T ss_pred             HHhcCCCEEEEecCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh
Confidence            344567899999987 688889999887  45 99999999988877754    34321112112   344444444432


Q ss_pred             ----CCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 ----GGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 ----g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                          +.||+|| |....  ...++.+.+.|+++ |.++.-.
T Consensus       143 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  182 (232)
T 3cbg_A          143 GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN  182 (232)
T ss_dssp             SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred             cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence                4799998 43322  34488889999997 9887754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.69  E-value=0.0073  Score=52.46  Aligned_cols=96  Identities=15%  Similarity=0.093  Sum_probs=63.4

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +|||+|+ |.+|...++.+... |. +|+++++++++...+...+...+ .|..+      .+.+.+... ++|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d------~~~l~~~~~-~~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN------QESMVEAFK-GMDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC------HHHHHHHTT-TCSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC------HHHHHHHHh-CCCEEEEeC
Confidence            5899987 99999999888877 88 89999998877655444454332 23222      233444433 699999998


Q ss_pred             CCH-------HHHHHHHHHhhcC-CcEEEEeccCC
Q 019535          232 GLA-------SLVQEAYACCRKG-WGKTIVLGVDQ  258 (339)
Q Consensus       232 g~~-------~~~~~~~~~l~~~-~G~~v~~g~~~  258 (339)
                      +..       .....+++.+... -+++|.++...
T Consensus        74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            752       2244556666553 14788887654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.68  E-value=0.0043  Score=55.82  Aligned_cols=90  Identities=18%  Similarity=0.206  Sum_probs=65.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.+++.|+..+        .++.+.+.     ..|+|+-++
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  228 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEMLP-----KCDVIVINM  228 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHGG-----GCSEEEECS
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHHh-----cCCEEEECC
Confidence            57899999999999999999999999 89999988766666777776422        13333222     378998887


Q ss_pred             CCH-H----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GLA-S----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~-~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.. .    .-...+..|+++ ..+|.++.
T Consensus       229 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            632 1    124667788886 77777764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.68  E-value=0.011  Score=49.15  Aligned_cols=96  Identities=14%  Similarity=0.094  Sum_probs=62.1

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+   ....++..+-   .+..+.+.+... ++|+||++++.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~~~~~D~---~d~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---NNVKAVHFDV---DWTPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---TTEEEEECCT---TSCHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---CCceEEEecc---cCCHHHHHHHHc-CCCEEEECCcC
Confidence            6899986 9999999999999999 999999987654332   2123333222   221344555443 69999999985


Q ss_pred             HH---------HHHHHHHHhhcC-CcEEEEeccCC
Q 019535          234 AS---------LVQEAYACCRKG-WGKTIVLGVDQ  258 (339)
Q Consensus       234 ~~---------~~~~~~~~l~~~-~G~~v~~g~~~  258 (339)
                      ..         ....+++.+... .+++|.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            31         133444444442 15888887654

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.67  E-value=0.0035  Score=50.63  Aligned_cols=98  Identities=15%  Similarity=0.197  Sum_probs=66.4

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHHhcC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .|..  .++. .+  ..+    +.....
T Consensus        18 ~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~--~~~----l~~~~~   87 (185)
T 3mti_A           18 EVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG--HEN----LDHYVR   87 (185)
T ss_dssp             TTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC--GGG----GGGTCC
T ss_pred             HhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc--HHH----HHhhcc
Confidence            4577899999999874 7888888877 76 99999999998887754    3432  3333 22  011    122233


Q ss_pred             CCccEEEEcCCC-----------H----HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 GGADYCFECVGL-----------A----SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g~~d~v~d~~g~-----------~----~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.||+|+-..+.           .    ..++.+.+.|+++ |+++.+..
T Consensus        88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            479999855321           1    2357888999998 99988754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.67  E-value=0.019  Score=49.10  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+.    +.+.. ..+  |..+  .+.+.+.+.+... 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ--PAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 88776 77776654442    23432 222  3333  1222222222211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        80 ~g~id~lv~nAg~   92 (258)
T 3oid_A           80 FGRLDVFVNNAAS   92 (258)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.67  E-value=0.0059  Score=52.23  Aligned_cols=90  Identities=19%  Similarity=0.280  Sum_probs=56.4

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh-------------------hHHHHHH----hcC-CceEEeCCCCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFEIGK----RFG-VTEFVNSKNCG  208 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~-------------------~~~~~~~----~~g-a~~vi~~~~~~  208 (339)
                      +.+|+|+|+|++|..+++.+...|..+++.++.+.                   .|.+.++    ++. ...+..... .
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~-~  109 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA-L  109 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS-C
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec-c
Confidence            46899999999999999999999998899998876                   4544442    222 112221111 0


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                       -+ .+.+.++. .++|+|++|+++...-..+.+.+..
T Consensus       110 -~~-~~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          110 -LD-DAELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             -CC-HHHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             -CC-HhHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence             11 11222221 2589999999987744444444444

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.67  E-value=0.014  Score=49.07  Aligned_cols=78  Identities=22%  Similarity=0.187  Sum_probs=50.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-----hcCCc-eEE--eCCCCCCccHHHHHHHhc--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-----RFGVT-EFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-----~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      ++++||.|+ |++|.+.++.+...|+ +|+.++++.++.+.+.     ..+.. .++  |..+  .+.+.+.+.+..  .
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK--AESVEEFSKKVLERF   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHCC-HHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC--HHHHHHHHHHHHHhc
Confidence            568999987 8999999999999999 8999999887765542     23432 222  3333  112222111111  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999998874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.66  E-value=0.021  Score=49.54  Aligned_cols=101  Identities=23%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhHHHHH----HhcCCc-eE--EeCCCCCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEIG----KRFGVT-EF--VNSKNCGDKS  211 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~~----~~~ga~-~v--i~~~~~~~~~  211 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++            .++.+.+    +..+.. ..  .|..+  .+.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~   85 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD--RAA   85 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC--HHH
Confidence            4788999987 8999999999999999 89999876            4433332    233432 22  23333  122


Q ss_pred             HHHHHHHhcC--CCccEEEEcCCCH--------H---------------HHHHHHHHhhcCCcEEEEecc
Q 019535          212 VSQIIIDMTD--GGADYCFECVGLA--------S---------------LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       212 ~~~~l~~~~~--g~~d~v~d~~g~~--------~---------------~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+.+.+...  +++|++++++|..        .               ..+.++..+... |++|.++.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS  154 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence            2233332221  3799999988741        1               123344445565 89998875

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.66  E-value=0.014  Score=51.90  Aligned_cols=89  Identities=17%  Similarity=0.198  Sum_probs=63.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+.. .       .+..+.+.     ..|+||-|++
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~-~-------~~~~e~~~-----~aDvVi~~vp   96 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATI-H-------EQARAAAR-----DADIVVSMLE   96 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEE-E-------SSHHHHHT-----TCSEEEECCS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEe-e-------CCHHHHHh-----cCCEEEEECC
Confidence            4589999999999999999999999 9999999999988887777532 1       12323221     4789999988


Q ss_pred             CHHHHHHHH------HHhhcCCcEEEEecc
Q 019535          233 LASLVQEAY------ACCRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~~~~~~~~------~~l~~~~G~~v~~g~  256 (339)
                      .+..++..+      ..+.++ ..++..+.
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            764455444      245554 55555543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.65  E-value=0.0063  Score=51.74  Aligned_cols=77  Identities=18%  Similarity=0.258  Sum_probs=52.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE--EeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.++.....  .|..+   .+-.+.+.+.. +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-ERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-SCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC---HHHHHHHHHHh-CCCCEEE
Confidence            3678999987 8999999999999999 99999998876655443321122  23333   33233333322 4799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      +++|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.013  Score=50.49  Aligned_cols=101  Identities=19%  Similarity=0.239  Sum_probs=62.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+ .++++..+.+    +..+.. ..  .|..+  .+.+.+.+.+... 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEEA  102 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4788999987 8999999998888999 78776 4444444433    234432 22  23333  1222222222221 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 -GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 -g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +++|++++++|..                         ...+.+++.+..+ |++|.++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  162 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST  162 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence             3799999988741                         1244555666676 89999875

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.65  E-value=0.0071  Score=49.31  Aligned_cols=100  Identities=20%  Similarity=0.228  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCC-c--eEEeCCCCCCccHHHHHHHh
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGV-T--EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga-~--~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ..++++.+||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|. .  .++..+-   .++    ...
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----~~~   89 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNM----DKY   89 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGG----GGT
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHH----hhh
Confidence            4577889999999875 788888888864 2299999999988877754    333 1  2332221   111    112


Q ss_pred             cCCCccEEEEcCCC---------------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+.+|+|+...+-               ...++.+.+.|+++ |+++....
T Consensus        90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            23479999854422               24588999999997 99987753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.65  E-value=0.0085  Score=51.78  Aligned_cols=79  Identities=19%  Similarity=0.248  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEE--eCCCCCCccHHHHHHHhc--CCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMT--DGGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi--~~~~~~~~~~~~~l~~~~--~g~~d  225 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+ +.....+  |..+  .+.+.+.+.+..  -+++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC--HHHHHHHHHHHHHHcCCCC
Confidence            4678999987 8999999999999999 89999998877665533 3322222  3333  122222222221  13799


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|+++|.
T Consensus        85 ~lv~nAg~   92 (270)
T 1yde_A           85 CVVNNAGH   92 (270)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998863

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.65  E-value=0.0058  Score=52.39  Aligned_cols=78  Identities=22%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .+.. ..  .|..+  .+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN--TDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 89999999887665532    2322 22  23333  1222232322221  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++++++|
T Consensus        82 g~id~lv~nAg   92 (257)
T 3imf_A           82 GRIDILINNAA   92 (257)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999988

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.63  E-value=0.0089  Score=51.44  Aligned_cols=78  Identities=27%  Similarity=0.299  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h---c--CCc-eE--EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---F--GVT-EF--VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~---~--ga~-~v--i~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. +   .  +.. ..  .|..+  .+.+.+.+.+...
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999989999 9999999887655432 1   1  432 22  23333  1223333332211


Q ss_pred             --CCccEEEEcCC
Q 019535          222 --GGADYCFECVG  232 (339)
Q Consensus       222 --g~~d~v~d~~g  232 (339)
                        +++|++|+++|
T Consensus        89 ~~g~id~lv~nAg  101 (267)
T 1iy8_A           89 RFGRIDGFFNNAG  101 (267)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999887

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.63  E-value=0.0021  Score=57.09  Aligned_cols=102  Identities=24%  Similarity=0.315  Sum_probs=69.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l  216 (339)
                      +...++++++++||.+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|...  ++..      +..+..
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~------d~~~~~  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG------DGYYGV  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CGGGCC
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC------Chhhcc
Confidence            45667788999999999876 7888888877542 379999999998887765    34332  2221      211111


Q ss_pred             HHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .  ..+.+|+|+....-....+.+.+.|+++ |+++..-
T Consensus       140 ~--~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          140 P--EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             G--GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             c--cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            0  1237999997665444356788999997 9988764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.63  E-value=0.009  Score=51.14  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eEE--eCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. +++.. ..+  |..+  .+.+.+.+.+...  +++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK--EADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHhcCCC
Confidence            4678999987 8999999999999999 8999999988776653 35432 222  3332  1223333332221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        85 d~li~~Ag~   93 (261)
T 3n74_A           85 DILVNNAGI   93 (261)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999998873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.63  E-value=0.0096  Score=52.66  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC---hhHHHHHH-h----cCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---SEKFEIGK-R----FGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~~-~----~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+. +    .+. ..+++.++  .+++.+.+.     
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~-----  225 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIA-----  225 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH-----
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhc-----
Confidence            57899999999999999999999999889999998   65554432 2    232 13344433  011222221     


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|+||+|++.
T Consensus       226 ~aDiIINaTp~  236 (315)
T 3tnl_A          226 ESVIFTNATGV  236 (315)
T ss_dssp             TCSEEEECSST
T ss_pred             CCCEEEECccC
Confidence            48999999863

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.62  E-value=0.012  Score=50.61  Aligned_cols=79  Identities=16%  Similarity=0.161  Sum_probs=48.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+.++..   +.+.+    +..|... .  .|..+  .+.+.+.+.+..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   86 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN--EEEVAKLFDFAE   86 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence            4678999987 8999999999999999 8988866433   22222    2234321 2  23333  122222222222


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  +++|++++++|.
T Consensus        87 ~~~g~iD~lvnnAg~  101 (262)
T 3ksu_A           87 KEFGKVDIAINTVGK  101 (262)
T ss_dssp             HHHCSEEEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            1  379999999883

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.62  E-value=0.013  Score=51.84  Aligned_cols=88  Identities=16%  Similarity=0.272  Sum_probs=65.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.++++++. .++++|+..    .     ++.+.+.     ..|+|+.++
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~-----~l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V-----SLEELLK-----NSDVISLHV  204 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C-----CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c-----CHHHHHh-----hCCEEEEec
Confidence            57899999999999999999999999 999999887764 456677642    1     2223332     269999888


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...    .+ +..+..++++ ..++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            7432    12 4567888987 88888865

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.62  E-value=0.0099  Score=50.56  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    ..|.. ..+  |..+  .+.+.+.+.+...  
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD--RQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3678999987 8999999999999999 8999999887665442    22432 222  3333  1222222222211  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        83 g~id~lv~nAg~   94 (247)
T 2jah_A           83 GGLDILVNNAGI   94 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.61  E-value=0.016  Score=51.00  Aligned_cols=88  Identities=23%  Similarity=0.211  Sum_probs=62.2

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.....+...    +..        ...|+||-|++.
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e~~--------~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR----EFA--------GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST----TTT--------TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH----HHH--------hcCCEEEEECCC
Confidence            579999999999999999989999 9999999999999888878654222211    110        147888888887


Q ss_pred             HHHHHHHH-------HHhhcCCcEEEEec
Q 019535          234 ASLVQEAY-------ACCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~-------~~l~~~~G~~v~~g  255 (339)
                      +...+..+       ..++++ ..++..+
T Consensus        75 ~~~~~~v~~~~~~l~~~l~~g-~ivv~~s  102 (303)
T 3g0o_A           75 AAQVRQVLFGEDGVAHLMKPG-SAVMVSS  102 (303)
T ss_dssp             HHHHHHHHC--CCCGGGSCTT-CEEEECS
T ss_pred             HHHHHHHHhChhhHHhhCCCC-CEEEecC
Confidence            65455543       344554 4555444

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.61  E-value=0.02  Score=49.32  Aligned_cols=103  Identities=19%  Similarity=0.270  Sum_probs=64.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHH----HHhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~----~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.++++ .++.+.    +++.+.. ..+  |..+  .+.+.+.+.+... 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   93 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ--VPEIVKLFDQAVAH   93 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 88886654 443333    2334532 222  3332  1223333332221 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          222 -GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       222 -g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                       +++|++++++|..                         ...+.++..+..+ |++|.++...
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence             3799999988741                         1245566677776 9999998644

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.61  E-value=0.0083  Score=52.06  Aligned_cols=79  Identities=23%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    ..+.. ..+  |..+  .+.+.+.+.+...  
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ--PDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 9999999887655442    23322 222  3333  1223333332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus       108 g~iD~lvnnAg~  119 (276)
T 3r1i_A          108 GGIDIAVCNAGI  119 (276)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.61  E-value=0.0061  Score=52.40  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcC--CceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFG--VTEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~g--a~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    +.+  ....+  |..+  .+.+.+.+.+... 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD--RAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 9999999887765542    233  11222  3332  1222222222221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++++++|.
T Consensus        86 ~g~id~lvnnAg~   98 (262)
T 3pk0_A           86 FGGIDVVCANAGV   98 (262)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence             379999998873

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.60  E-value=0.012  Score=51.00  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=50.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc---C---Cc-eE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---G---VT-EF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~---g---a~-~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++   .   .. ..  .|..+  .+.+.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence            3578899987 8999999999888999 9999999887665542 22   2   11 22  23333  122222232221


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  +++|++|+++|.
T Consensus        82 ~~~g~id~lv~~Ag~   96 (278)
T 1spx_A           82 GKFGKLDILVNNAGA   96 (278)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHcCCCCEEEECCCC
Confidence            1  379999998874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.60  E-value=0.012  Score=50.19  Aligned_cols=102  Identities=16%  Similarity=0.245  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      ....++.+||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        75 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~  149 (247)
T 1sui_A           75 LKLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIK  149 (247)
T ss_dssp             HHHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE---CCHHHHHHHHHh
Confidence            344567899999986 478888888886  45 99999999988877754    35321111111   33444443332 


Q ss_pred             ----CCCccEEEEcCC---CHHHHHHHHHHhhcCCcEEEEec
Q 019535          221 ----DGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ----~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                          .+.||+||-...   ....++.+.+.|+++ |.++.-.
T Consensus       150 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          150 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             SGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             ccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence                347999984332   244588899999997 9887643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.60  E-value=0.015  Score=51.04  Aligned_cols=78  Identities=24%  Similarity=0.256  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC---c-eEE--eCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV---T-EFV--NSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga---~-~vi--~~~~~~~~~~~~~l~~~~  220 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+.    +.+.   . .++  |..+  .+.+.+.+.+..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~  101 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL  101 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHHH
Confidence            3678999987 8999999999999999 8999999887665432    2232   1 222  3333  122222222221


Q ss_pred             --CCCccEEEEcCC
Q 019535          221 --DGGADYCFECVG  232 (339)
Q Consensus       221 --~g~~d~v~d~~g  232 (339)
                        -+++|++|+++|
T Consensus       102 ~~~g~iD~lvnnAG  115 (297)
T 1xhl_A          102 AKFGKIDILVNNAG  115 (297)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              137999999887

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.60  E-value=0.0088  Score=51.02  Aligned_cols=97  Identities=12%  Similarity=0.162  Sum_probs=63.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcC--CCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~--g~~d~v~  228 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.     ....++..+  .+++.+.+.+...  +++|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999987 8999999999999999 89999988764321     111222222  1333334444332  3799999


Q ss_pred             EcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          229 ECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       229 d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +++|..                          ...+.+...+..+ |++|.++..
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            988730                          0134455566675 899998754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.59  E-value=0.022  Score=50.41  Aligned_cols=90  Identities=18%  Similarity=0.227  Sum_probs=63.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCcc-HHHHHHHhcCCCccEEEEc
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKS-VSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~-~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+|.|+|.|.+|...++.++..|.. +|++.++++++.+.+++.|.. ...+ +.   .+ .   +     ...|+||-|
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~-~~---~~~~---~-----~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-SI---AKVE---D-----FSPDFVMLS  101 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-CT---TGGG---G-----GCCSEEEEC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcC-CH---HHHh---h-----ccCCEEEEe
Confidence            5899999999999999999988874 799999999999988888863 2222 11   11 1   1     258999999


Q ss_pred             CCCHHH---HHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLASL---VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~~---~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++....   ++.....++++ ..++.++.
T Consensus       102 vp~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            987542   33444556665 56665553

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.59  E-value=0.0084  Score=51.08  Aligned_cols=79  Identities=25%  Similarity=0.269  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.+    .+.. .++  |..+  .+++.+.+.+..  .
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD--PESAKAMADRTLAEF   84 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 89999998877655432    2322 222  3222  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        85 g~id~li~~Ag~   96 (253)
T 3qiv_A           85 GGIDYLVNNAAI   96 (253)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.59  E-value=0.011  Score=49.87  Aligned_cols=75  Identities=16%  Similarity=0.243  Sum_probs=50.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcC--CCccEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~v~  228 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+.+++++++  ..+.++...+ .|..+   +++.+.+.+...  +++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK---DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT---SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch---HHHHHHHHHHHHHcCCCCEEE
Confidence            468999987 8999999999999999 89999988765  3334453222 23222   344333333221  3799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      ++.|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.59  E-value=0.014  Score=49.30  Aligned_cols=75  Identities=16%  Similarity=0.190  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c-CCceEEeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-GVTEFVNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~-ga~~vi~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.+ . +. .++..+-   .+ .+.+.+...  +++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~---~~-~~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGI-EPVCVDL---GD-WDATEKALGGIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTC-EEEECCT---TC-HHHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCC-CcEEecC---CC-HHHHHHHHHHcCCCCE
Confidence            4678999987 9999999999999999 89999998877655433 3 33 2332221   11 123333332  36899


Q ss_pred             EEEcCC
Q 019535          227 CFECVG  232 (339)
Q Consensus       227 v~d~~g  232 (339)
                      +|+++|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.59  E-value=0.009  Score=50.14  Aligned_cols=76  Identities=13%  Similarity=0.092  Sum_probs=51.5

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc---eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT---EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~---~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      +++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++..   ...|..+   .+-.+.+.+.....+|+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhhcCCEEE
Confidence            36899987 8999999999999999 89999999888766643 4321   1233333   3333333333334459999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      +++|.
T Consensus        78 ~~Ag~   82 (230)
T 3guy_A           78 HSAGS   82 (230)
T ss_dssp             ECCCC
T ss_pred             EeCCc
Confidence            98873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.58  E-value=0.0081  Score=51.34  Aligned_cols=79  Identities=23%  Similarity=0.384  Sum_probs=52.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..  .|..+  .+.+.+.+.+...  +++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            3678999987 8999999999999999 899999988776554 334422 22  23333  1223333332221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        81 D~lv~nAg~   89 (254)
T 1hdc_A           81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.58  E-value=0.027  Score=48.44  Aligned_cols=78  Identities=24%  Similarity=0.352  Sum_probs=50.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC---ceEE--eCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFV--NSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga---~~vi--~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++.   ..++  |..+  .+.+.+.+.+..  .+
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            4678999987 8999999999989999 899999887665443 33331   1222  3322  122222222221  13


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      ++|++|+++|
T Consensus        92 ~id~li~~Ag  101 (278)
T 2bgk_A           92 KLDIMFGNVG  101 (278)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.58  E-value=0.01  Score=50.91  Aligned_cols=79  Identities=30%  Similarity=0.421  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc----CCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~----ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++    +.. ..+  |..+  .+.+.+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3678999987 8999999999999999 9999999887655432 22    432 222  3333  1222222222211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.57  E-value=0.028  Score=48.61  Aligned_cols=79  Identities=22%  Similarity=0.292  Sum_probs=50.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhHHHHH----HhcCCce-E--EeCCCCCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-------------ISEKFEIG----KRFGVTE-F--VNSKNCGDK  210 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-------------~~~~~~~~----~~~ga~~-v--i~~~~~~~~  210 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+++++             ++++.+.+    +..|... .  .|..+  .+
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~   90 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--DA   90 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--HH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HH
Confidence            5788999987 8999999999999999 8999887             44544433    2334322 2  23333  12


Q ss_pred             cHHHHHHHhc--CCCccEEEEcCCC
Q 019535          211 SVSQIIIDMT--DGGADYCFECVGL  233 (339)
Q Consensus       211 ~~~~~l~~~~--~g~~d~v~d~~g~  233 (339)
                      .+.+.+.+..  -+++|++++++|.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222222221  1379999998874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.57  E-value=0.009  Score=51.41  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. +++.. ..  .|..+  .+.+.+.+.+...  +++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence            3678999987 8999999999999999 9999999887766553 34321 22  23333  1222222322211  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        82 D~lvnnAg~   90 (263)
T 2a4k_A           82 HGVAHFAGV   90 (263)
T ss_dssp             CEEEEGGGG
T ss_pred             cEEEECCCC
Confidence            999998873

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.57  E-value=0.013  Score=50.59  Aligned_cols=79  Identities=18%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-H----hcCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-K----RFGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +    ..+.. ..+  |..+  .+.+.+.+.+..  
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   96 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 899999987765443 2    22432 222  3333  122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|++|+++|.
T Consensus        97 ~g~iD~lvnnAg~  109 (267)
T 1vl8_A           97 FGKLDTVVNAAGI  109 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1379999998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.57  E-value=0.0095  Score=51.69  Aligned_cols=79  Identities=22%  Similarity=0.197  Sum_probs=53.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..  .|..+  .+.+.+.+.+...  +++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS--AKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 999999988776655 334532 22  23333  1222222332221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus       103 D~lv~nAg~  111 (277)
T 4dqx_A          103 DVLVNNAGF  111 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.57  E-value=0.012  Score=50.36  Aligned_cols=78  Identities=15%  Similarity=0.220  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHH---HHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQII---IDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l---~~~~  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+    +..+.. ..  .|..+  .+.+.+.+   .+..
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999989999 899999987765543    223432 12  23333  12222222   2222


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      .+++|++|+++|
T Consensus        85 ~g~id~lv~~Ag   96 (260)
T 2ae2_A           85 HGKLNILVNNAG   96 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            257999999887

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.57  E-value=0.015  Score=51.32  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=50.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC---hhHHHHH-Hhc----CCc-eEEeCCCCCCccH-HHHHHHhcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRF----GVT-EFVNSKNCGDKSV-SQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~-~~~----ga~-~vi~~~~~~~~~~-~~~l~~~~~  221 (339)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ +++    +.. .+++..+   .+. .+.+.    
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l~----  219 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEALA----  219 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHHH----
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhcc----
Confidence            57899999999999999999999999889999999   5554443 222    221 2333332   111 22222    


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                       .+|+||+|++.
T Consensus       220 -~~DiIINaTp~  230 (312)
T 3t4e_A          220 -SADILTNGTKV  230 (312)
T ss_dssp             -HCSEEEECSST
T ss_pred             -CceEEEECCcC
Confidence             37999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.56  E-value=0.016  Score=49.24  Aligned_cols=79  Identities=24%  Similarity=0.236  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHH-HHHhcCCc-eEE--eCCCCCCccHHHHHHHhc--CCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE-IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~-~~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++ ++.+ .+++.+.. ..+  |..+  .+.+.+.+.+..  -++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHcCC
Confidence            4678999987 8999999999999999 899999887 5544 34445532 222  3333  122222222221  147


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++|+++|.
T Consensus        83 id~lv~nAg~   92 (249)
T 2ew8_A           83 CDILVNNAGI   92 (249)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.56  E-value=0.003  Score=53.16  Aligned_cols=102  Identities=12%  Similarity=0.143  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--c--eEEeCCCCCCccHHHHHHHhcC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--T--EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--~--~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +...++++.+||-+|+|. |..+..+++..|..+|++++.+++..+.+++...  .  ..+..+.   .+... .... .
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~-~~~~-~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQE-YANI-V  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGG-GTTT-S
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCccc-cccc-C
Confidence            345577889999999876 8888889988874499999999988877754321  1  2222221   11000 0011 1


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhhcCCcEEEEe
Q 019535          222 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       222 g~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.+|+|+.....+    ..++.+.+.|+++ |+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            3799999665544    3378889999997 998886

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.56  E-value=0.0078  Score=49.73  Aligned_cols=97  Identities=16%  Similarity=0.156  Sum_probs=68.6

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce--EEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      ..+.++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++.+...  ++..+-   .++      ...+.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC------CCCCcee
Confidence            3467788999999875 7777777777 77 9999999999999998866322  222221   111      1233899


Q ss_pred             EEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          226 YCFECVG-----L---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       226 ~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+....     .   ...++.+.+.|+++ |.++.....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            9985332     2   34588889999997 999888654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.56  E-value=0.01  Score=51.73  Aligned_cols=79  Identities=16%  Similarity=0.170  Sum_probs=52.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+.. ..+  |..+  .+.+.+.+.+...  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD--ELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999999999999 99999998877655432    2322 222  3333  1223333332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus       104 g~iD~lVnnAg~  115 (283)
T 3v8b_A          104 GHLDIVVANAGI  115 (283)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.55  E-value=0.013  Score=50.61  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=52.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHH---HHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQ---IIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~---~l~~~~  220 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|..+  .+.+.+   .+.+..
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 899999988765543    223432 22  23333  122222   222223


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|++|+++|.
T Consensus        97 ~g~id~lv~nAg~  109 (273)
T 1ae1_A           97 DGKLNILVNNAGV  109 (273)
T ss_dssp             TSCCCEEEECCCC
T ss_pred             CCCCcEEEECCCC
Confidence            2579999998874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.54  E-value=0.015  Score=53.56  Aligned_cols=95  Identities=16%  Similarity=0.195  Sum_probs=67.1

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|+|+|.|.+|+..++.++..|. .|++++.++++.+.+++.|...+. -+.    .-.+.+++..-..+|+++-+++
T Consensus         4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDa----t~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCT----TCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCC----CCHHHHHhcCCCccCEEEECCC
Confidence            4579999999999999999999999 899999999999999988875443 222    1122344432238999999999


Q ss_pred             CHHHHH---HHHHHhhcCCcEEEEe
Q 019535          233 LASLVQ---EAYACCRKGWGKTIVL  254 (339)
Q Consensus       233 ~~~~~~---~~~~~l~~~~G~~v~~  254 (339)
                      ....-.   ...+.+.+. -+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            865332   333344454 455544

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.53  E-value=0.012  Score=49.93  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=52.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.    +.+.. ..  .|..+  .+.+.+.+.+..  .
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD--IESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            3678999987 8999999999989999 9999999887665543    23432 22  23333  122333333332  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        81 ~~id~li~~Ag~   92 (247)
T 3lyl_A           81 LAIDILVNNAGI   92 (247)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.53  E-value=0.009  Score=53.76  Aligned_cols=88  Identities=19%  Similarity=0.176  Sum_probs=62.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+...|+..+        .++.+.+.+     .|+|+-+.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~~-----aDiV~l~~  223 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFEQ-----SDVLSVHL  223 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHhh-----CCEEEEec
Confidence            47899999999999999999999999 999999875 3445556675321        233333333     68888877


Q ss_pred             CCHH-----HHHHHHHHhhcCCcEEEEec
Q 019535          232 GLAS-----LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~-----~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +...     .-...+..|+++ ..+|.++
T Consensus       224 Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          224 RLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             cCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            5321     123566778886 7887776

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.53  E-value=0.0065  Score=53.26  Aligned_cols=79  Identities=16%  Similarity=0.186  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h---cC--CceE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FG--VTEF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~---~g--a~~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +   .+  ....  .|..+  .+.+.+.+.+... 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD--PGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 9999999887655442 2   23  1122  23333  1222222222221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus       117 ~g~iD~lvnnAg~  129 (293)
T 3rih_A          117 FGALDVVCANAGI  129 (293)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.53  E-value=0.011  Score=51.16  Aligned_cols=79  Identities=16%  Similarity=0.228  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+    ++.+.. ..  .|..+  .+.+.+.+.+..  -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            3678999987 8999999999999999 899999988765443    223432 22  23332  122222222221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        98 g~iD~lv~~Ag~  109 (277)
T 2rhc_B           98 GPVDVLVNNAGR  109 (277)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.53  E-value=0.0075  Score=50.42  Aligned_cols=101  Identities=15%  Similarity=0.088  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcC------CCEEEEEcCChhHHHHHHhc----C-----C--ceEEeCCCCCCcc
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCG------ATRIIGVDVISEKFEIGKRF----G-----V--TEFVNSKNCGDKS  211 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G------~~~Vi~~~~~~~~~~~~~~~----g-----a--~~vi~~~~~~~~~  211 (339)
                      .++++.+||.+|+|. |..++.+++..+      . +|++++.+++..+.+++.    +     .  ..++..+.  ...
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNS-YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQV  152 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTC-EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCC-EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhc
Confidence            578899999999876 888889998876      4 899999999888777542    3     1  22332221  011


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          212 VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       212 ~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+...  ..+.||+|+.........+.+.+.|+++ |+++..-.
T Consensus       153 ~~~~~~--~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          153 NEEEKK--ELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             CHHHHH--HHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccCc--cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            110001  1237999997776655578899999997 99887754

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.52  E-value=0.011  Score=52.13  Aligned_cols=102  Identities=19%  Similarity=0.265  Sum_probs=70.6

Q ss_pred             HHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHH
Q 019535          144 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~  215 (339)
                      +.+... ++++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+-   .++   
T Consensus       108 l~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~---  179 (312)
T 3vc1_A          108 LMDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT---  179 (312)
T ss_dssp             HHTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC---
T ss_pred             HHHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC---
Confidence            334444 78899999999874 7888888887788 99999999998877764    3421   2232221   111   


Q ss_pred             HHHhcCCCccEEEEc-----CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          216 IIDMTDGGADYCFEC-----VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~~g~~d~v~d~-----~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        .+..+.||+|+..     .+-...++.+.+.|+++ |+++....
T Consensus       180 --~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 --PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             --CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             --CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence              1122479999853     33355688999999998 99988764

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.52  E-value=0.005  Score=51.35  Aligned_cols=103  Identities=15%  Similarity=0.143  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      ....++.+||-+|+| .|..++.+++..  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        54 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~  128 (223)
T 3duw_A           54 VQIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALDSLQQIEN  128 (223)
T ss_dssp             HHHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh
Confidence            345678899999987 488888888887  45 99999999988877754    35321111111   34444333332 


Q ss_pred             --CCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 --DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 --~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        .+.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       129 ~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          129 EKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence              1369999843322   34588889999997 98776543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.51  E-value=0.0093  Score=51.86  Aligned_cols=79  Identities=18%  Similarity=0.149  Sum_probs=53.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.. ..  .|..+  .+.+.+.+.+..  .+++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS--LQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence            4678999987 8999999999999999 99999999887766543 4432 22  23332  122222233221  1379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        81 D~lvnnAg~   89 (281)
T 3zv4_A           81 DTLIPNAGI   89 (281)
T ss_dssp             CEEECCCCC
T ss_pred             CEEEECCCc
Confidence            999998873

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.51  E-value=0.0085  Score=56.19  Aligned_cols=91  Identities=16%  Similarity=0.162  Sum_probs=67.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|.|+|.|.+|..+++.++.+|+ +|+++++++.+.......|.. +        .++.+.+     ...|+|+.+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~--------~~l~ell-----~~aDiVi~~  339 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-V--------VTMEYAA-----DKADIFVTA  339 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHHHHT-----TTCSEEEEC
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-e--------CCHHHHH-----hcCCEEEEC
Confidence            468899999999999999999999999 999999988765344445653 1        1222222     248999998


Q ss_pred             CCCHHHH-HHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLV-QEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~-~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++....+ ...+..|+++ ..++.++..
T Consensus       340 ~~t~~lI~~~~l~~MK~g-AilINvgrg  366 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHN-AIVCNIGHF  366 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred             CCcccccCHHHHhhCCCC-cEEEEcCCC
Confidence            8654433 4677889997 888888764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.51  E-value=0.0081  Score=51.30  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c-C--Cc-eEEeCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F-G--VT-EFVNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~-g--a~-~vi~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    . +  .. ...|......+.+.+.+.+..  
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            5788999987 8999999999999999 99999998877655422    1 2  11 122331111122223232222  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|++++++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2379999998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.50  E-value=0.0075  Score=51.56  Aligned_cols=77  Identities=18%  Similarity=0.147  Sum_probs=52.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHH---HHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQ---IIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~---~l~~~~  220 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.|.. ..  .|..+  .+.+.+   .+.+. 
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN--EDEVTAFLNAADAH-   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC--HHHHHHHHHHHHhh-
Confidence            4678999987 8999999999999999 9999999887755442    23432 22  23333  122222   23232 


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        82 -g~id~lv~nAg~   93 (252)
T 3h7a_A           82 -APLEVTIFNVGA   93 (252)
T ss_dssp             -SCEEEEEECCCC
T ss_pred             -CCceEEEECCCc
Confidence             579999998884

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.50  E-value=0.0093  Score=50.54  Aligned_cols=81  Identities=16%  Similarity=0.203  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcC--CceEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFG--VTEFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~g--a~~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    ..+  ...++  +.+....+.+.+.+.+..  
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4678999987 8999999999999999 8999999987765543    233  12222  221111122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|++|+++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1379999998874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.50  E-value=0.013  Score=50.20  Aligned_cols=79  Identities=20%  Similarity=0.180  Sum_probs=52.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC-ceE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEF--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga-~~v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. .+.. ...  .|..+  .+.+.+.+.+..  .+++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 9999999887766543 2321 122  23333  122222222221  1379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        88 D~lv~~Ag~   96 (263)
T 3ak4_A           88 DLLCANAGV   96 (263)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999998873

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.49  E-value=0.0089  Score=51.19  Aligned_cols=79  Identities=22%  Similarity=0.219  Sum_probs=52.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.. ..+  |..+  .+.+.+.+.+...  
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD--EQHREAVIKAALDQF   87 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999998888999 8999999887665542    23432 222  3333  1222222222221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus        88 g~id~lv~nAg~   99 (256)
T 3gaf_A           88 GKITVLVNNAGG   99 (256)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.48  E-value=0.036  Score=47.86  Aligned_cols=33  Identities=36%  Similarity=0.371  Sum_probs=29.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence            4688999987 8999999999999999 8999887

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.47  E-value=0.016  Score=49.70  Aligned_cols=79  Identities=22%  Similarity=0.224  Sum_probs=49.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+.. ..+  |..+  .+.+.+.+.+... 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN--AAEVEAAISAAADK   83 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 88887 5555443332    333432 222  3333  1222223332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++++++|.
T Consensus        84 ~g~id~lv~nAg~   96 (259)
T 3edm_A           84 FGEIHGLVHVAGG   96 (259)
T ss_dssp             HCSEEEEEECCCC
T ss_pred             hCCCCEEEECCCc
Confidence             379999998863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.47  E-value=0.012  Score=49.82  Aligned_cols=79  Identities=23%  Similarity=0.326  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.+     .+.. .++  |..+  .+.+.+.+.+..  
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS--EESINKAFEEIYNL   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            3578899987 9999999999888999 99999998776654422     2432 222  3222  122322232221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|++|+++|.
T Consensus        83 ~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           83 VDGIDILVNNAGI   95 (248)
T ss_dssp             SSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2379999998873

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.46  E-value=0.032  Score=48.74  Aligned_cols=104  Identities=20%  Similarity=0.169  Sum_probs=62.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHH----HhcCCceEEeCCCCCCcc-HHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIG----KRFGVTEFVNSKNCGDKS-VSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~----~~~ga~~vi~~~~~~~~~-~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++.+  ..+.+    ++.|....+-.-+....+ +.+.+.+...  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4788999987 8999999999999999 8998887632  22222    334533222111211122 2222222211  


Q ss_pred             CCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          222 GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 g~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +++|+++++.|..                          ...+.++..+..+ |++|.++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~  187 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECCh
Confidence            3799999988741                          1133444456666 899998754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.45  E-value=0.026  Score=47.62  Aligned_cols=79  Identities=23%  Similarity=0.288  Sum_probs=47.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++ .+++++.+.+    +..+.. ..+  |..+  .+.+.+.+.+..  
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN--PEDVENMVKTAMDA   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHh
Confidence            3578999987 9999999999999999 88888 5555544332    233432 222  2222  122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|++|+++|.
T Consensus        81 ~~~~d~vi~~Ag~   93 (247)
T 2hq1_A           81 FGRIDILVNNAGI   93 (247)
T ss_dssp             HSCCCEEEECC--
T ss_pred             cCCCCEEEECCCC
Confidence            1379999998874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.45  E-value=0.0053  Score=55.59  Aligned_cols=90  Identities=19%  Similarity=0.271  Sum_probs=63.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCE-EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATR-IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~-Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ + |++.++++.+.+.+.++|+..+        .++.+.+.     ..|+|+.+
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~  228 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV--------ENIEELVA-----QADIVTVN  228 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH-----TCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec--------CCHHHHHh-----cCCEEEEC
Confidence            57899999999999999999999999 6 9999988766666666774321        12333222     36888887


Q ss_pred             CCCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          231 VGLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++...    .+ +..+..|+++ ..+|.++.
T Consensus       229 ~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          229 APLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            76531    12 3456777776 77777764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.45  E-value=0.012  Score=50.50  Aligned_cols=79  Identities=20%  Similarity=0.210  Sum_probs=52.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ +.+|.+.++.+...|+ +|+.+++++++.+.+.    +.+.. ..+  |..+  .+.+.+.+.+..  -
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5788999987 8999999999999999 8999999887765542    23432 222  3333  122222233221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            379999998854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.45  E-value=0.013  Score=49.71  Aligned_cols=79  Identities=15%  Similarity=0.311  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc--eEE--eCCCCCCccHHHHHHHhc-CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFV--NSKNCGDKSVSQIIIDMT-DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi--~~~~~~~~~~~~~l~~~~-~g~~  224 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++..  ..+  |..+  .+.+.+.+.+.. .+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence            4678999987 9999999999999999 899999988766554 334422  222  3332  122222222211 2479


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999998873

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.44  E-value=0.012  Score=50.97  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCce-E--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~-v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.++++.+...|+ +|+.+++++++.+.+.    +.+... .  .|..+  .+.+.+.+.+...  
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVERF   99 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5688999987 8999999999989999 8999999887765442    234322 2  23333  1222222332221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            379999998874

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.43  E-value=0.015  Score=49.10  Aligned_cols=95  Identities=15%  Similarity=0.144  Sum_probs=66.7

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ++++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++.  ..++.      .+..+.+..+..+.||+|+.
T Consensus        39 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~------~d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           39 FKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK------SDAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             TTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC------SCHHHHHHTSCTTCBSEEEE
T ss_pred             hcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee------ccHHHHhhhcCCCCeeEEEE
Confidence            56788999999863 5666666665 88 899999999999888775  22332      34444333444458999985


Q ss_pred             c-----CCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          230 C-----VGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       230 ~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .     .+.   ...++.+.+.|+++ |.++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            3     232   35588999999998 99887643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.43  E-value=0.0058  Score=51.58  Aligned_cols=96  Identities=13%  Similarity=0.035  Sum_probs=61.8

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+|||.|+ |.+|..+++.+...| + +|+++++++++.+.+...++..+ .|..+   .   +.+.+... ++|++|++
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d---~---~~~~~~~~-~~D~vv~~   95 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN---H---AALKQAMQ-GQDIVYAN   95 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC---H---HHHHHHHT-TCSEEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC---H---HHHHHHhc-CCCEEEEc
Confidence            57999986 999999999999999 7 99999998776543322222221 22222   2   23333332 58999998


Q ss_pred             CCCHH---HHHHHHHHhhcC-CcEEEEeccC
Q 019535          231 VGLAS---LVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~---~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      .+...   ..+.+++.+... .+++|.++..
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            88643   134455555443 2588888763

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.43  E-value=0.0068  Score=50.65  Aligned_cols=87  Identities=15%  Similarity=0.137  Sum_probs=57.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.++++++             .|..+  .+.+.+.+.++  +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--CCCCEEEEC
Confidence            3578899987 8999999999888899 8999987654             23333  12233333333  478999988


Q ss_pred             CCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|..                          ...+.+++.+.++ |+++.++..
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            8742                          0133344455565 899998754

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.43  E-value=0.014  Score=49.62  Aligned_cols=100  Identities=22%  Similarity=0.269  Sum_probs=70.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +.....+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-   .++    
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhC----
Confidence            45566788999999999875 8888899988888 99999999988877754    3421   2222221   111    


Q ss_pred             HHhcCCCccEEEEc-----C-CCHHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDGGADYCFEC-----V-GLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g~~d~v~d~-----~-g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       . ..+.||+|+..     . .-...++.+.+.|+++ |+++...
T Consensus        99 -~-~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 -V-ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             -C-CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             -C-cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence             0 12379999852     1 2345588899999997 9988864

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.42  E-value=0.0074  Score=51.93  Aligned_cols=102  Identities=13%  Similarity=0.047  Sum_probs=66.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhcC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +....++.++.+||-+|+|. |..++.+++. |. +|++++.+++..+.+++.-..  ...+..+   .+.  .......
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~---~~~--~~~~~~~  108 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLD---ITA--EIPKELA  108 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECC---TTS--CCCGGGT
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeee---ccc--ccccccC
Confidence            44566788999999999874 8888888775 77 999999999999988764321  1122222   110  0001112


Q ss_pred             CCccEEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.||+|+....     .   ...+..+.+.+ ++ |++++.-
T Consensus       109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS~  148 (261)
T 3iv6_A          109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRASV  148 (261)
T ss_dssp             TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEEE
T ss_pred             CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEEe
Confidence            47999985432     1   22477777888 97 9887653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.42  E-value=0.015  Score=50.24  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+.. .++  |..+  .+.+.+.+.+..  .
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAEI  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            4678999987 8999999999999999 899999987765543    223432 222  3322  122223232221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       107 g~iD~li~~Ag~  118 (272)
T 1yb1_A          107 GDVSILVNNAGV  118 (272)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            379999998873

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.42  E-value=0.014  Score=51.88  Aligned_cols=89  Identities=17%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.++ ++++ +.++++|+.. .       .++.+.+.     ..|+|+.+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh-----hCCEEEEe
Confidence            57899999999999999999999999 9999998 7765 3455677632 1       13333332     26999988


Q ss_pred             CCCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          231 VGLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++...    .+ +..+..++++ ..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            87432    12 3456778886 77777764

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.42  E-value=0.029  Score=51.25  Aligned_cols=110  Identities=16%  Similarity=0.210  Sum_probs=71.0

Q ss_pred             hHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----------cCC--ce--EEeCC
Q 019535          141 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----------FGV--TE--FVNSK  205 (339)
Q Consensus       141 ~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----------~ga--~~--vi~~~  205 (339)
                      +..+...++++++++||-+|+| .|..++++|+..|+.+|++++.+++..+.+++           +|.  ..  ++..+
T Consensus       162 i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD  240 (438)
T 3uwp_A          162 VAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  240 (438)
T ss_dssp             HHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred             HHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence            3346677789999999999987 48888899988898679999999865555432           342  22  23222


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEE-cC--C--CHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          206 NCGDKSVSQIIIDMTDGGADYCFE-CV--G--LASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g~~d~v~d-~~--g--~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      - ...++.+.+     ..+|+||- +.  .  -...+.+.++.|+++ |++|.+-...
T Consensus       241 ~-~~lp~~d~~-----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~  291 (438)
T 3uwp_A          241 F-LSEEWRERI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFA  291 (438)
T ss_dssp             T-TSHHHHHHH-----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSS
T ss_pred             c-cCCcccccc-----CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeeccc
Confidence            2 111221111     14899984 22  1  122366778889998 9999886543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.41  E-value=0.023  Score=48.32  Aligned_cols=74  Identities=22%  Similarity=0.158  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      -.+.++||.|+ |.+|.+.++.+...|+ +|+.++++++..   ++++...++  -+. .+++.+.+.+..  ++|++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~--~D~-~~~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV--CDL-RKDLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE--CCT-TTCHHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE--eeH-HHHHHHHHHHhc--CCCEEEE
Confidence            35788999987 8999999999989999 899999887443   344532232  221 134444333332  6999999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      ++|.
T Consensus        88 ~Ag~   91 (249)
T 1o5i_A           88 NAGG   91 (249)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.41  E-value=0.011  Score=51.35  Aligned_cols=78  Identities=18%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCceE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +++   +...+  .|..+  .+.+.+.+.+..  .+
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSS--EAGARRLAQALGELSA  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS--HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence            3678999987 8999999999999999 899999988765543 222   31111  12222  122222222221  24


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      ++|++|+++|
T Consensus       105 ~iD~lvnnAg  114 (276)
T 2b4q_A          105 RLDILVNNAG  114 (276)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.41  E-value=0.0064  Score=50.75  Aligned_cols=104  Identities=14%  Similarity=0.149  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC-
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~-  221 (339)
                      ....++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..... 
T Consensus        60 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~  135 (225)
T 3tr6_A           60 VKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHA  135 (225)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTT
T ss_pred             HHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhc
Confidence            3445778999999874 888888888763 3399999999988877754    34321111111   344444433332 


Q ss_pred             ---CCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          222 ---GGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 ---g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                         +.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       136 ~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          136 GQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             cCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence               479999843332   34478889999997 98887543

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.40  E-value=0.014  Score=50.79  Aligned_cols=73  Identities=16%  Similarity=0.164  Sum_probs=54.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|...   .     .+..+.+..     .|+||-|++.+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~-----~~~~~~~~~-----advvi~~v~~~   68 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQ---A-----SSPAEVCAA-----CDITIAMLADP   68 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEE---C-----SCHHHHHHH-----CSEEEECCSSH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee---c-----CCHHHHHHc-----CCEEEEEcCCH
Confidence            58899999999999888888899 8999999999988887777531   1     233333332     68888888876


Q ss_pred             HHHHHHH
Q 019535          235 SLVQEAY  241 (339)
Q Consensus       235 ~~~~~~~  241 (339)
                      ..++..+
T Consensus        69 ~~~~~v~   75 (287)
T 3pdu_A           69 AAAREVC   75 (287)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4355544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.40  E-value=0.0092  Score=51.92  Aligned_cols=79  Identities=11%  Similarity=0.183  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +.. ..  .|..+  .+.+.+.+.+... 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD--PDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5678999987 8999999999999999 99999998877655432 2    211 22  23333  1222232322211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++++++|.
T Consensus       109 ~g~iD~lvnnAG~  121 (281)
T 4dry_A          109 FARLDLLVNNAGS  121 (281)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             479999998874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.40  E-value=0.0053  Score=52.26  Aligned_cols=75  Identities=21%  Similarity=0.218  Sum_probs=49.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc--CCCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--DGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~--~g~~d~v~  228 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+.  +  ...|..+  .+.+.+.+.+..  .+++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999987 8999999999999999 8999998765443221  1  2234443  122222222221  13789999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      +++|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.39  E-value=0.012  Score=51.52  Aligned_cols=78  Identities=14%  Similarity=0.086  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCC--ceE--EeCCCCCCc-cHHHHH-HHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGV--TEF--VNSKNCGDK-SVSQII-IDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga--~~v--i~~~~~~~~-~~~~~l-~~~~  220 (339)
                      .++++||.|+ |++|.++++.+...|+ +|+.++++.++.+.+    ++.+.  ..+  +|..+   . +..+.+ ....
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~---~~~~v~~~~~~~~   86 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD---PIATMSSLADFIK   86 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS---CHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC---cHHHHHHHHHHHH
Confidence            4678999987 8999999999889999 999999998765443    22221  122  23333   2 222222 2221


Q ss_pred             --CCCccEEEEcCCC
Q 019535          221 --DGGADYCFECVGL  233 (339)
Q Consensus       221 --~g~~d~v~d~~g~  233 (339)
                        .+++|++|+++|.
T Consensus        87 ~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           87 THFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHSSCCEEEECCCC
T ss_pred             HhCCCCCEEEECCcc
Confidence              1379999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.39  E-value=0.016  Score=50.05  Aligned_cols=78  Identities=21%  Similarity=0.252  Sum_probs=50.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++++..+.+++   .+.. ..  .|..+   .+-.+.+.+..  .+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD---LEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC---HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC---HHHHHHHHHHHHhcC
Confidence            4678999987 8999999999999999 89999876544443333   3322 12  23333   33222222211  14


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus       106 ~iD~lv~nAg~  116 (273)
T 3uf0_A          106 RVDVLVNNAGI  116 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.39  E-value=0.013  Score=50.26  Aligned_cols=79  Identities=13%  Similarity=0.216  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+. ++... ..  .|..+  .+.+.+.+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999888999 9999999887765543 33221 22  23333  1222233332211  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        83 D~lv~~Ag~   91 (260)
T 1nff_A           83 HVLVNNAGI   91 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.39  E-value=0.016  Score=49.40  Aligned_cols=78  Identities=24%  Similarity=0.330  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+.. .++  |..+  .+.+.+.+.+...  
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN--TESVQNAVRSVHEQE   88 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999989999 999999987665433    223432 222  3232  1222233332211  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        89 ~~id~vi~~Ag   99 (260)
T 3awd_A           89 GRVDILVACAG   99 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999886

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.39  E-value=0.022  Score=50.89  Aligned_cols=87  Identities=25%  Similarity=0.415  Sum_probs=62.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|. +|++.++++++ +.++.+|..  .       .++.+.+.+     .|+|+.++
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~--~-------~~l~~~l~~-----aDvVil~v  212 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAE--F-------KPLEDLLRE-----SDFVVLAV  212 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCE--E-------CCHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCcc--c-------CCHHHHHhh-----CCEEEECC
Confidence            46789999999999999999999999 99999998877 555566652  1       123333332     68998888


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEec
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g  255 (339)
                      +...    .+ ...+..++++ ..++.++
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            6533    12 3556778886 7777665

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.38  E-value=0.0092  Score=51.74  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=52.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+++++++++.+.+. .++.. ..  .|..+  .+.+.+.+.+...  +++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD--GERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC--HHHHHHHHHHHHHhCCCC
Confidence            3578999987 8999999999999999 9999999887766553 34422 22  23333  1222222322221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        81 d~lv~~Ag~   89 (281)
T 3m1a_A           81 DVLVNNAGR   89 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.38  E-value=0.016  Score=52.19  Aligned_cols=90  Identities=21%  Similarity=0.299  Sum_probs=62.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHH-HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|.|+|.|.+|...++.++ ..|. +|++.++++++.+...++|+..+        .++.+.+.+     .|+|+.+
T Consensus       162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV--------DSLEELARR-----SDCVSVS  227 (348)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHHHH-----CSEEEEC
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe--------CCHHHHhcc-----CCEEEEe
Confidence            5789999999999999999999 9999 99999988776666666665321        123333332     6899888


Q ss_pred             CCCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          231 VGLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++...    .+ ...+..++++ ..++.++.
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            76432    11 3456777775 66666653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.38  E-value=0.02  Score=49.05  Aligned_cols=78  Identities=17%  Similarity=0.180  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHh---c
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDM---T  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~---~  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.    ..+.. ..  .|..+  .+.+.+.+.+.   .
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ--ESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            3678899987 8999999999999999 8999999877655432    22432 22  23333  12232333332   1


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      .+++|++++++|
T Consensus        81 ~g~id~lvnnAg   92 (260)
T 2qq5_A           81 QGRLDVLVNNAY   92 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCceEEEECCc
Confidence            357999999984

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.37  E-value=0.013  Score=49.52  Aligned_cols=102  Identities=17%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      ....++.+||.+|+| .|..++.+++.+  +. ++++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        66 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~  140 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVF-TGYSLLLTALSIPDDG-KITAIDFDREAYEIGLPFIRKAGVEHKINFIE---SDAMLALDNLLQ  140 (237)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHHHSCTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCCCEEEEeCCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh
Confidence            344567899999986 377888888886  45 99999999988877754    35421111111   34444443332 


Q ss_pred             ----CCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          221 ----DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ----~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                          .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       141 ~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          141 GQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             STTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence                3479999843322   34478889999997 9887643

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.37  E-value=0.038  Score=48.62  Aligned_cols=89  Identities=16%  Similarity=0.054  Sum_probs=64.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|...   .     .+..+.+..     .|+||-|++
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~-----~~~~e~~~~-----aDvVi~~vp   74 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---C-----ESVKAALSA-----SPATIFVLL   74 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---C-----SSHHHHHHH-----SSEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHhc-----CCEEEEEeC
Confidence            4579999999999999999999999 8999999999988887777531   1     234444433     699999999


Q ss_pred             CHHHHHHHH-----HHhhcCCcEEEEecc
Q 019535          233 LASLVQEAY-----ACCRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~~~~~~~~-----~~l~~~~G~~v~~g~  256 (339)
                      .+..++..+     ..+.++ ..++.++.
T Consensus        75 ~~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           75 DNHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             SHHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             CHHHHHHHhcccchhhccCC-CEEEECCC
Confidence            775444433     234554 56666654

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.37  E-value=0.014  Score=52.16  Aligned_cols=88  Identities=30%  Similarity=0.448  Sum_probs=64.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++.+ +.++.+|+..    .     ++.+.+.     ..|+|+.+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~-----~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L-----PLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C-----CHHHHGG-----GCSEEEECC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C-----CHHHHHh-----cCCEEEEec
Confidence            57899999999999999999999999 99999987665 3556677642    1     2222221     379999888


Q ss_pred             CCHHH----H-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLASL----V-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~~----~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +....    + ...+..++++ ..++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            75321    2 4567788887 88888875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.37  E-value=0.011  Score=50.22  Aligned_cols=79  Identities=22%  Similarity=0.258  Sum_probs=51.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC---CceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFV--NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g---a~~vi--~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.   ...++  |..+  .+.+.+.+.+...  +
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            3678999987 9999999999989999 8999999877665442 232   11222  3222  1222222222211  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus        82 ~id~li~~Ag~   92 (251)
T 1zk4_A           82 PVSTLVNNAGI   92 (251)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.36  E-value=0.013  Score=50.23  Aligned_cols=78  Identities=28%  Similarity=0.372  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++.. .++  |..+  .+.+.+.+.+...  +++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS--EKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCCCC
Confidence            4678999987 8999999999999999 899999887665544 344432 222  3332  1223332322211  379


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++|+++|
T Consensus        88 d~li~~Ag   95 (265)
T 2o23_A           88 DVAVNCAG   95 (265)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.36  E-value=0.02  Score=51.69  Aligned_cols=133  Identities=20%  Similarity=0.224  Sum_probs=81.7

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc-CCCEEEEE-cCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          154 STVVIFGLGSIGLAVAEGARLC-GATRIIGV-DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~-~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      -+|.|+|+|.+|...+..++.. ++ +++++ ++++++.+.++++|+. +  +     .++.+.+.+   ..+|+|+.|+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~--~-----~~~~~ll~~---~~~D~V~i~t   73 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-I--Y-----ESYEAVLAD---EKVDAVLIAT   73 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-B--C-----SCHHHHHHC---TTCCEEEECS
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-e--e-----CCHHHHhcC---CCCCEEEEcC
Confidence            4689999999998888777766 66 66654 6777777777777763 2  1     234333321   3799999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      +...-.+.+..++..  |+-|++..+..... -...+... ..+++.+ .++.   ......++.+.+++.+|.+
T Consensus        74 p~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           74 PNDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN---RRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG---GGGCHHHHHHHHHHHHTTT
T ss_pred             CcHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee---eccCHHHHHHHHHHHcCCC
Confidence            988878888888887  56677754321110 01111122 2234433 3332   1223457778888888765

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.36  E-value=0.019  Score=49.70  Aligned_cols=92  Identities=8%  Similarity=-0.009  Sum_probs=60.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC--ceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .+++++|+|+|++|.+++..+...|+++|+++.+++++.+.+ ++++.  ..++..++     +.       ...+|+||
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----l~-------~~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----LE-------GQSFDIVV  186 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----GT-------TCCCSEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----hc-------ccCCCEEE
Confidence            578999999999999999988899977999999998876654 44543  23332222     11       13699999


Q ss_pred             EcCCCHHHH---HHHHHHhhcCCcEEEEecc
Q 019535          229 ECVGLASLV---QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       229 d~~g~~~~~---~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|++....-   ....+.++++ ..++++..
T Consensus       187 naTp~gm~~~~~~i~~~~l~~~-~~V~DlvY  216 (272)
T 3pwz_A          187 NATSASLTADLPPLPADVLGEA-ALAYELAY  216 (272)
T ss_dssp             ECSSGGGGTCCCCCCGGGGTTC-SEEEESSC
T ss_pred             ECCCCCCCCCCCCCCHHHhCcC-CEEEEeec
Confidence            998754210   0112346665 56666644

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.36  E-value=0.0066  Score=50.64  Aligned_cols=96  Identities=18%  Similarity=0.225  Sum_probs=61.0

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+.  ....++..+-   .+ .+.+.+... ++|+||++++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl---~d-~~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADV---SS-LDEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCT---TC-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecC---CC-HHHHHHHhc-CCCEEEEeCc
Confidence            57999987 9999999999999998 9999999877643221  1112222221   11 233334333 5899999987


Q ss_pred             CH-----------HHHHHHHHHhhcC-CcEEEEeccC
Q 019535          233 LA-----------SLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       233 ~~-----------~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      ..           .....+++.+... ..++|.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            64           2244555555553 1378888754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.36  E-value=0.0074  Score=51.87  Aligned_cols=79  Identities=13%  Similarity=0.069  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH-HHHHhcCCceE-EeCCCCCCccHHHHHHHhc--CCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGVTEF-VNSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++. +.+++.++..+ .|..+  .+.+.+.+.+..  .+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcCCCCE
Confidence            3578999987 8999999999999999 899999887653 44455564322 23333  122323333221  237999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +++++|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.36  E-value=0.013  Score=49.36  Aligned_cols=36  Identities=22%  Similarity=0.490  Sum_probs=31.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      +.++||.|+ |.+|.+.++.+...|+ +|+.+++++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~   39 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSAND   39 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccc
Confidence            467899987 8999999999999999 99999987654

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.35  E-value=0.0096  Score=51.84  Aligned_cols=94  Identities=16%  Similarity=0.224  Sum_probs=65.1

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-----C---------Cc--eEEeCCCCCCccHHH
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----G---------VT--EFVNSKNCGDKSVSQ  214 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-----g---------a~--~vi~~~~~~~~~~~~  214 (339)
                      ..+.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +         ..  .++.      .+..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            4578999998764 6677777777 766999999999988887753     1         11  2221      34444


Q ss_pred             HHHHhcCCCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          215 IIIDMTDGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       215 ~l~~~~~g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+..  .+.||+|+ |...         ....++.+.+.|+++ |.++...
T Consensus       146 ~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  193 (281)
T 1mjf_A          146 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  193 (281)
T ss_dssp             HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             Hhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            4444  44899998 4431         244588999999997 9988764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.34  E-value=0.014  Score=49.95  Aligned_cols=79  Identities=19%  Similarity=0.164  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHH---HHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQII---IDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l---~~~~  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+.. .++  |..+  .+.+.+.+   .+..
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            3578999987 8999999999999999 999999987765543    223432 222  2222  11222222   2222


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      ++++|++|+++|.
T Consensus        90 ~~~id~li~~Ag~  102 (266)
T 1xq1_A           90 GGKLDILINNLGA  102 (266)
T ss_dssp             TTCCSEEEEECCC
T ss_pred             CCCCcEEEECCCC
Confidence            2579999998874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.34  E-value=0.016  Score=49.80  Aligned_cols=79  Identities=19%  Similarity=0.123  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----h-cCCc--eE--EeCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----R-FGVT--EF--VNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~-~ga~--~v--i~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    . .+..  ..  .|..+  .+.+.+.+.+.. 
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 8999999887665442    2 3322  22  23333  122222222221 


Q ss_pred             -CCCccEEEEcCCC
Q 019535          221 -DGGADYCFECVGL  233 (339)
Q Consensus       221 -~g~~d~v~d~~g~  233 (339)
                       -+++|++++++|.
T Consensus        84 ~~g~id~lvnnAg~   97 (265)
T 3lf2_A           84 TLGCASILVNNAGQ   97 (265)
T ss_dssp             HHCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence             1379999998874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.34  E-value=0.014  Score=50.35  Aligned_cols=79  Identities=24%  Similarity=0.263  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. .  ..|..+  .+.+.+.+.+...  +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 899999988776554 345532 2  233333  1222222222221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.33  E-value=0.0073  Score=53.08  Aligned_cols=94  Identities=14%  Similarity=0.010  Sum_probs=62.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .+.+++|+|+|++|.+++..+...|+++|+++.+++++.+.+ +.++..  .++        ++ +.+.+.. ..+|+||
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~-~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRL-AEYDIII  209 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTG-GGCSEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhh-ccCCEEE
Confidence            578999999999999999999999987899999998876554 455542  222        11 1222222 2589999


Q ss_pred             EcCCCHHHH-----HHHHHHhhcCCcEEEEecc
Q 019535          229 ECVGLASLV-----QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       229 d~~g~~~~~-----~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|++....-     ......+.++ ..++++..
T Consensus       210 n~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          210 NTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             ECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            999864310     0112345564 66667655

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.33  E-value=0.0094  Score=47.98  Aligned_cols=102  Identities=17%  Similarity=0.151  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +.....+.++.+||.+|+|. |..+..+++.. . ++++++.+++..+.+++    .+. ..+ ....   .++.+.+..
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~---~d~~~~~~~   97 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLME---GDAPEALCK   97 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEE---SCHHHHHTT
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcce-EEEe---cCHHHhccc
Confidence            44556788899999999876 78888887766 5 99999999988877765    343 221 1111   233332221


Q ss_pred             hcCCCccEEEEcCC---CHHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                        .+.+|+|+....   -...++.+.+.|+++ |+++...
T Consensus        98 --~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           98 --IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             --SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             --CCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence              137999996543   144578888999997 9888764

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.32  E-value=0.0089  Score=54.54  Aligned_cols=90  Identities=16%  Similarity=0.107  Sum_probs=62.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|. +|++.++++.+.+..+.+|+..+        .++.+.+ +    ..|+|+.++
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~ell-~----~aDvV~l~~  255 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMY-P----VCDVVTLNC  255 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHG-G----GCSEEEECS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHHHH-h----cCCEEEEec
Confidence            57899999999999999999999999 99999988766666666775321        1222222 1    368888877


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...    .+ ...+..|+++ ..+|.++.
T Consensus       256 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          256 PLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            6321    12 3556677776 77777763

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=96.32  E-value=0.052  Score=46.87  Aligned_cols=103  Identities=16%  Similarity=0.177  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~~  218 (339)
                      ..+.++++++||-+|+|+ |..+..++... +..+|++++.++++.+.+++    +|...  ++.      .+..+....
T Consensus        77 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~------~D~~~~~~~  149 (274)
T 3ajd_A           77 IVLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN------ADMRKYKDY  149 (274)
T ss_dssp             HHHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE------SCHHHHHHH
T ss_pred             HHhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe------CChHhcchh
Confidence            345678899999998764 66667777765 43499999999998877654    45432  332      233222221


Q ss_pred             h--cCCCccEEE-E--cCCC---------------------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          219 M--TDGGADYCF-E--CVGL---------------------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       219 ~--~~g~~d~v~-d--~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +  ..+.||.|+ |  |.+.                     ...++.+++.|+++ |+++....
T Consensus       150 ~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stc  212 (274)
T 3ajd_A          150 LLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTC  212 (274)
T ss_dssp             HHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             hhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEEC
Confidence            1  134799998 4  4431                     34577888899997 99877543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.31  E-value=0.011  Score=50.59  Aligned_cols=79  Identities=19%  Similarity=0.323  Sum_probs=47.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..  .|..+  .+++.+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN--EADATAALAFAKQEFGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 8999999999999999 899999987765544 334422 22  23333  1222232322221  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        83 d~lv~nAg~   91 (257)
T 3tpc_A           83 HGLVNCAGT   91 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.31  E-value=0.0082  Score=51.14  Aligned_cols=75  Identities=19%  Similarity=0.279  Sum_probs=51.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCce---EEeCCCCCCccHHHHHHHhcC-CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMTD-GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~~-g~~  224 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.++++..  ..+.+++.|...   ..|..+   +.   .+++... +++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d---~~---~v~~~~~~g~i   80 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD---PL---AAKDSFTDAGF   80 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS---TT---TTTTSSTTTCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC---HH---HHHHHHHhCCC
Confidence            4778888887 8999999999999999 8999988753  345556666432   223333   22   1223222 489


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        81 DiLVNNAGi   89 (247)
T 4hp8_A           81 DILVNNAGI   89 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.31  E-value=0.01  Score=55.49  Aligned_cols=91  Identities=20%  Similarity=0.264  Sum_probs=66.7

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.+.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +        .++.+.+     ...|+|+-+
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~--------~~l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V--------VTLDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHHHHT-----TTCSEEEEC
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e--------cCHHHHH-----hcCCEEEEC
Confidence            468899999999999999999999999 999999988765444455652 2        1222222     247999988


Q ss_pred             CCCHHHH-HHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLV-QEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~-~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+....+ ...++.|+++ ..++.+|..
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg  346 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHF  346 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence            7654433 3667788887 888888754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.31  E-value=0.02  Score=49.65  Aligned_cols=76  Identities=24%  Similarity=0.323  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhcC-CCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-GGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-g~~d  225 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++.. .+  .|..+  .+.+.+.+.+... +++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS--EDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHTTSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhCCCC
Confidence            4678999987 8999999999999999 8999999988766653 45532 22  23333  1233333333321 2789


Q ss_pred             EEEEc
Q 019535          226 YCFEC  230 (339)
Q Consensus       226 ~v~d~  230 (339)
                      +++.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.30  E-value=0.015  Score=50.61  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=51.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c---CCce-EE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVTE-FV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~---ga~~-vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +   +... .+  |..+  .+.+.+.+.+...  
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGD--EALHEALVELAVRRF   83 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 89999998877655432 2   3222 11  2222  1222222222211  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        84 g~iD~lvnnAg   94 (280)
T 3tox_A           84 GGLDTAFNNAG   94 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.30  E-value=0.0096  Score=51.56  Aligned_cols=101  Identities=11%  Similarity=0.048  Sum_probs=68.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHhc-----CCce--EEeCCCCCCccHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRF-----GVTE--FVNSKNCGDKSVSQ  214 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~~-----ga~~--vi~~~~~~~~~~~~  214 (339)
                      +.....+.++.+||-+|+| .|..+..+++..  +. +|++++.+++..+.+++.     |...  ++..      ++.+
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~------d~~~  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS------DIAD  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS------CTTT
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC------chhc
Confidence            4455678899999999987 477888888874  45 999999999888877652     5322  2221      2111


Q ss_pred             HHHHhcCCCccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535          215 IIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                         .+..+.+|+|+-..... ..++.+.+.|+++ |+++....
T Consensus       174 ---~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 ---FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             ---CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             ---cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence               11123799999755543 4588999999997 99888753

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.29  E-value=0.027  Score=49.74  Aligned_cols=87  Identities=16%  Similarity=0.280  Sum_probs=61.2

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. +  .     .+..+.+.     ..|+||.|++.
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~-----~~~~~~~~-----~~DvVi~av~~   96 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGAR-L--G-----RTPAEVVS-----TCDITFACVSD   96 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCE-E--C-----SCHHHHHH-----HCSEEEECCSS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCE-E--c-----CCHHHHHh-----cCCEEEEeCCC
Confidence            469999999999999988888898 899999998888877776653 1  1     12333332     37999999996


Q ss_pred             HHHHHHHHH-------HhhcCCcEEEEec
Q 019535          234 ASLVQEAYA-------CCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~~-------~l~~~~G~~v~~g  255 (339)
                      +...+..+.       .+.++ ..++.++
T Consensus        97 ~~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           97 PKAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            654665553       24454 4555554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.29  E-value=0.012  Score=49.70  Aligned_cols=77  Identities=21%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhc-CCc-eEE--eCCCCCCccHHHHH---HHhcCC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF-GVT-EFV--NSKNCGDKSVSQII---IDMTDG  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~-ga~-~vi--~~~~~~~~~~~~~l---~~~~~g  222 (339)
                      +.++||.|+ |.+|..+++.+...|  + +|+++++++++.+.++++ +.. .++  |..+  .+.+.+.+   .+..+.
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC--HHHHHHHHHHHHHhcCC
Confidence            568999987 999999999998899  8 999999998877766654 221 222  3222  12222222   222222


Q ss_pred             -CccEEEEcCC
Q 019535          223 -GADYCFECVG  232 (339)
Q Consensus       223 -~~d~v~d~~g  232 (339)
                       ++|++|+++|
T Consensus        80 ~~id~li~~Ag   90 (250)
T 1yo6_A           80 DGLSLLINNAG   90 (250)
T ss_dssp             GCCCEEEECCC
T ss_pred             CCCcEEEECCc
Confidence             6999999886

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.28  E-value=0.034  Score=46.18  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=55.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. ..+.. ++..+.   .+ .+.+++..-..+|+++-+++.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKAT-IIHGDG---SH-KEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSE-EEESCT---TS-HHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCe-EEEcCC---CC-HHHHHhcCcccCCEEEEecCC
Confidence            48899999999999999999999 8999999999887764 45654 333332   11 233444433379999999998


Q ss_pred             HH
Q 019535          234 AS  235 (339)
Q Consensus       234 ~~  235 (339)
                      ..
T Consensus        76 d~   77 (218)
T 3l4b_C           76 DE   77 (218)
T ss_dssp             HH
T ss_pred             cH
Confidence            76

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.28  E-value=0.0076  Score=51.99  Aligned_cols=79  Identities=20%  Similarity=0.194  Sum_probs=51.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++.++.+.+...... ...|..+  .+.+.+.+.+...  +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD--KYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC--HHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            4678999987 8999999999999999 899999887766544322211 1223333  1222222322221  379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.26  E-value=0.032  Score=48.69  Aligned_cols=78  Identities=12%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc----CCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~----ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++    +.. .++  |..+  .+.+.+.+....  
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 8999999877655432 21    432 222  3332  122223222221  


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      .+.+|++|+++|
T Consensus       102 ~g~id~li~~Ag  113 (302)
T 1w6u_A          102 AGHPNIVINNAA  113 (302)
T ss_dssp             TCSCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            237899999887

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.26  E-value=0.0075  Score=50.52  Aligned_cols=96  Identities=21%  Similarity=0.189  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCC------CEEEEEcCChhHHHHHHhc----C-------CceEEeCCCCCCcc
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGA------TRIIGVDVISEKFEIGKRF----G-------VTEFVNSKNCGDKS  211 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~------~~Vi~~~~~~~~~~~~~~~----g-------a~~vi~~~~~~~~~  211 (339)
                      .++++.+||.+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +       ...++..+.     
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-----  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-----  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-----
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc-----
Confidence            478899999999875 8888888887662      3899999999887777542    1       122222221     


Q ss_pred             HHHHHHHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          212 VSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       212 ~~~~l~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .+   .+.. +.||+|+.........+.+.+.|+++ |+++..-
T Consensus       155 -~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          155 -RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             -GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence             11   1122 37999997776655578899999997 9987764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.25  E-value=0.015  Score=50.23  Aligned_cols=78  Identities=28%  Similarity=0.303  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .+.++||.|+ |.+|...+..+...|+ +|+.+++++++.+.+.    ..+.. .++  |..+  .+.+.+.+.+...  
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD--PKSVEETISQQEKDF  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999988888899 8999998776544332    23432 222  3332  1223233322211  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +.+|++|+++|
T Consensus       110 g~id~li~~Ag  120 (279)
T 3ctm_A          110 GTIDVFVANAG  120 (279)
T ss_dssp             SCCSEEEECGG
T ss_pred             CCCCEEEECCc
Confidence            36999999876

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.25  E-value=0.015  Score=49.51  Aligned_cols=75  Identities=15%  Similarity=0.274  Sum_probs=50.1

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eEE--eCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      ++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. +++.. ..+  |..+  .+.+.+.+.+...  +++|++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHTSCTTTCCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHhCCCCCEE
Confidence            6788887 8999999999999999 9999999887766543 34422 222  3333  1223333333322  379999


Q ss_pred             EEcCC
Q 019535          228 FECVG  232 (339)
Q Consensus       228 ~d~~g  232 (339)
                      |+++|
T Consensus        79 vnnAg   83 (248)
T 3asu_A           79 VNNAG   83 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.23  E-value=0.031  Score=48.31  Aligned_cols=74  Identities=12%  Similarity=0.054  Sum_probs=52.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+++|+|+|++|.++++.+...|+ +|+++.+++++.+.+ +.++...-++..+  ..+    +.+   +.+|+++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~----~~~---~~~DivVn~  187 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDE----LEG---HEFDLIINA  187 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG----GTT---CCCSEEEEC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHH----hcc---CCCCEEEEC
Confidence            57899999999999999999999997 999999998876544 4454310011111  011    111   479999999


Q ss_pred             CCCHH
Q 019535          231 VGLAS  235 (339)
Q Consensus       231 ~g~~~  235 (339)
                      ++...
T Consensus       188 t~~~~  192 (271)
T 1nyt_A          188 TSSGI  192 (271)
T ss_dssp             CSCGG
T ss_pred             CCCCC
Confidence            98755

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.23  E-value=0.085  Score=46.97  Aligned_cols=76  Identities=21%  Similarity=0.250  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh----HHHHHHhc------CCceEEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRF------GVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~----~~~~~~~~------ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .+.+|||+|+ |.+|..+++.+...|. +|+++++++.    ..+.++..      ....++..+-   .+ .+.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI---RD-LTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT---TC-HHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC---CC-HHHHHHHh
Confidence            3578999987 9999999999999999 9999998543    33333332      2222332221   12 23344444


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      . ++|+||++++.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 69999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.23  E-value=0.019  Score=49.59  Aligned_cols=79  Identities=15%  Similarity=0.008  Sum_probs=50.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHHH-hc----CCc-eE--EeCCCCCC----ccHHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGK-RF----GVT-EF--VNSKNCGD----KSVSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~-~~----ga~-~v--i~~~~~~~----~~~~~~l~  217 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++ ++++.+.+. ++    +.. .+  .|..+  .    +.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   86 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL--SSSLLDCCEDIID   86 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--STTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC--ccccHHHHHHHHH
Confidence            3578899987 8999999999989999 9999998 776655432 22    432 22  23333  2    12222222


Q ss_pred             Hhc--CCCccEEEEcCCC
Q 019535          218 DMT--DGGADYCFECVGL  233 (339)
Q Consensus       218 ~~~--~g~~d~v~d~~g~  233 (339)
                      +..  -+++|++|+++|.
T Consensus        87 ~~~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCC
Confidence            221  1379999998873

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.22  E-value=0.026  Score=48.77  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=50.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhHHHHH----HhcCCc-eE--EeCCCCCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEIG----KRFGVT-EF--VNSKNCGDKS  211 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~~----~~~ga~-~v--i~~~~~~~~~  211 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.++++            +++.+.+    +..+.. ..  .|..+  .+.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~   88 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD--RES   88 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC--HHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC--HHH
Confidence            4788999987 8999999999999999 89999876            4443332    233432 22  23333  122


Q ss_pred             HHHHHHHhcC--CCccEEEEcCCC
Q 019535          212 VSQIIIDMTD--GGADYCFECVGL  233 (339)
Q Consensus       212 ~~~~l~~~~~--g~~d~v~d~~g~  233 (339)
                      +.+.+.+...  +++|++|+++|.
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            2223332221  379999998874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.22  E-value=0.016  Score=49.08  Aligned_cols=79  Identities=23%  Similarity=0.297  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++ ++++.+.+    +..+.. ..+  |..+  .+.+.+.+.+... 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3578899987 8999999999999999 8999888 66655433    223432 222  3333  1223332322211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 2uvd_A           80 FGQVDILVNNAGV   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.21  E-value=0.021  Score=49.60  Aligned_cols=79  Identities=23%  Similarity=0.297  Sum_probs=49.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHHH----hc-CCc-eEE--eCCCCCCccHHHHHHHhc-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGK----RF-GVT-EFV--NSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~----~~-ga~-~vi--~~~~~~~~~~~~~l~~~~-  220 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+.    .. +.. ..+  |..+  .+.+.+.+.+.. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  100 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK--PSEIADMMAMVAD  100 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4678999987 8999999999999999 8999988 444444332    22 322 222  2222  122222222221 


Q ss_pred             -CCCccEEEEcCCC
Q 019535          221 -DGGADYCFECVGL  233 (339)
Q Consensus       221 -~g~~d~v~d~~g~  233 (339)
                       -+++|++++++|.
T Consensus       101 ~~g~iD~lv~nAg~  114 (281)
T 3v2h_A          101 RFGGADILVNNAGV  114 (281)
T ss_dssp             HTSSCSEEEECCCC
T ss_pred             HCCCCCEEEECCCC
Confidence             2379999998874

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.21  E-value=0.0089  Score=53.44  Aligned_cols=97  Identities=20%  Similarity=0.260  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc------CC----ceEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV----TEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~------ga----~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.      |.    ..++.      .+..+.+...
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~~  190 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  190 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHhc
Confidence            45678999998763 66777787766544999999999988887652      11    12222      3444444433


Q ss_pred             cCCCccEEEE-cC---C------CHHHHHHHHHHhhcCCcEEEEe
Q 019535          220 TDGGADYCFE-CV---G------LASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       220 ~~g~~d~v~d-~~---g------~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ..+.||+|+- ..   +      ....++.+.+.|+++ |.++.-
T Consensus       191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            3348999984 32   1      245588999999997 998885

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.20  E-value=0.019  Score=48.62  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=50.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc----CCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFV--NSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~----ga~-~vi--~~~~~~~~~~~~~l~~~~~--  221 (339)
                      +.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+. ++    +.. .++  |..+  .+.+.+.+.+...  
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD--EGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            468999987 9999999999989999 8999999887665442 22    322 222  3222  1222232322211  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        79 ~~id~li~~Ag   89 (250)
T 2cfc_A           79 GAIDVLVNNAG   89 (250)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999886

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.20  E-value=0.052  Score=45.92  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=48.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCce-EE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~~-vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++ ++++.+.+    +..+... .+  |..+  .+++.+.+.+... 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD--ADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            3578899987 8999999999999999 8887766 43444333    3344332 22  3222  1222222332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++++++|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 3osu_A           80 FGSLDVLVNNAGI   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.20  E-value=0.015  Score=49.46  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+.. .++  |..+  .+.+.+.+.+..  .
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999988999 899999987765443    223432 222  2222  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        87 ~~~d~vi~~Ag~   98 (255)
T 1fmc_A           87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.20  E-value=0.012  Score=49.21  Aligned_cols=97  Identities=21%  Similarity=0.198  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cC-----C--ceEEeCCCCCCccHHHHHH
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FG-----V--TEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~g-----a--~~vi~~~~~~~~~~~~~l~  217 (339)
                      ++++.+||.+|+|. |..+..+++..|. .+|++++.+++..+.+++    .+     .  ..++..+      ..+.  
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------~~~~--  145 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------GRMG--  145 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------GGGC--
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC------cccC--
Confidence            77899999999875 8888888888763 289999999988877754    22     1  1222221      1100  


Q ss_pred             HhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ....+.||+|+.........+.+.+.|+++ |+++..-.
T Consensus       146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            011237999997666555578899999997 99887643

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.19  E-value=0.03  Score=50.56  Aligned_cols=111  Identities=15%  Similarity=0.166  Sum_probs=72.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC----hhH---------HHHHHhcCCceEEeCCCCCCccHHHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI----SEK---------FEIGKRFGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~----~~~---------~~~~~~~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      .+.+|+|+|+|..|..+++++..+|+++|++++++    .++         .+++++...    ....   .++.+.++ 
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~~---~~L~eav~-  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERLS---GDLETALE-  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCCC---SCHHHHHT-
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCch---hhHHHHHc-
Confidence            67899999999999999999999999899999987    544         333333221    0011   45555553 


Q ss_pred             hcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEe
Q 019535          219 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  279 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~  279 (339)
                          ++|++|-+++.....++.++.|+++ ..++.++.+.    ....+...+..+..+..
T Consensus       263 ----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~a  314 (388)
T 1vl6_A          263 ----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVA  314 (388)
T ss_dssp             ----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEE
T ss_pred             ----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEE
Confidence                3799998887544466788888886 6665555432    23444444443333333

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=96.19  E-value=0.023  Score=49.68  Aligned_cols=45  Identities=22%  Similarity=0.271  Sum_probs=37.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF  196 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~  196 (339)
                      .++.+||-+|+|. |..++.+++..+..+|++++.++...+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3678999999874 88888999988655999999999988888653

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.19  E-value=0.051  Score=47.45  Aligned_cols=87  Identities=16%  Similarity=0.302  Sum_probs=60.2

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. +  .     .+..+.+.     ..|+||.|++.
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~-----~~~~~~~~-----~~D~vi~~vp~   70 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--C-----ENNQKVAA-----ASDIIFTSLPN   70 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--C-----SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--c-----CCHHHHHh-----CCCEEEEECCC
Confidence            479999999999999888888898 899999998888877666642 1  1     23333332     27999999987


Q ss_pred             HHHHHHHH-------HHhhcCCcEEEEec
Q 019535          234 ASLVQEAY-------ACCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~-------~~l~~~~G~~v~~g  255 (339)
                      +...+..+       ..+.++ ..++.++
T Consensus        71 ~~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           71 AGIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            65454444       345554 4555543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.18  E-value=0.029  Score=49.14  Aligned_cols=78  Identities=21%  Similarity=0.219  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhHHHH----HHhcCCce-E--EeCCCCCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEI----GKRFGVTE-F--VNSKNCGDKS  211 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~----~~~~ga~~-v--i~~~~~~~~~  211 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|++++++            +++.+.    ++..|... .  .|..+  .+.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~  103 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD--FDA  103 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC--HHH
Confidence            4678999987 8999999999999999 89998876            333332    23345322 2  23333  122


Q ss_pred             HHHHHHHhcC--CCccEEEEcCC
Q 019535          212 VSQIIIDMTD--GGADYCFECVG  232 (339)
Q Consensus       212 ~~~~l~~~~~--g~~d~v~d~~g  232 (339)
                      +.+.+.+...  +++|++|+++|
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCC
Confidence            2223332221  37999999887

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.18  E-value=0.088  Score=40.92  Aligned_cols=77  Identities=4%  Similarity=0.056  Sum_probs=52.4

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHHHh---cCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKR---FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~---~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ..+++|+|+|.+|...++.+...|. +|++++++ +++.+.++.   .|.. ++.-+.   .+ .+.+.+..-.++|.|+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---ND-SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TS-HHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC---CC-HHHHHHcChhhCCEEE
Confidence            4579999999999999999999999 89999986 455544432   2443 333322   11 2334443233799999


Q ss_pred             EcCCCHH
Q 019535          229 ECVGLAS  235 (339)
Q Consensus       229 d~~g~~~  235 (339)
                      -+++...
T Consensus        77 ~~~~~d~   83 (153)
T 1id1_A           77 ALSDNDA   83 (153)
T ss_dssp             ECSSCHH
T ss_pred             EecCChH
Confidence            9998765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.18  E-value=0.014  Score=50.02  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-C-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcC-C-ceE--EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFG-V-TEF--VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~g-a-~~v--i~~~~~~~~~~~~~l~~~~~  221 (339)
                      .++++||.|+ | ++|...++.+...|+ +|+.++++.++.+.+.    +.+ . ..+  .|..+  .+.+.+.+.+...
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   97 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS--TEAVDALITQTVE   97 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC--HHHHHHHHHHHHH
Confidence            4778999987 7 799999999989999 8999999887655442    222 1 122  23333  1223233332221


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|+++|.
T Consensus        98 ~~g~id~li~~Ag~  111 (266)
T 3o38_A           98 KAGRLDVLVNNAGL  111 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCCcEEEECCCc
Confidence              379999998884

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.18  E-value=0.018  Score=49.18  Aligned_cols=79  Identities=15%  Similarity=0.205  Sum_probs=51.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+    +..+.. ..  .|..+  .+++.+.+.+..  -
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK--AEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 8999999999999999 999999987765443    223432 22  23222  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        90 g~iD~lv~~Ag~  101 (260)
T 2zat_A           90 GGVDILVSNAAV  101 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.18  E-value=0.023  Score=49.73  Aligned_cols=78  Identities=17%  Similarity=0.255  Sum_probs=50.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---------cCCc-eEE--eCCCCCCccHHHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGVT-EFV--NSKNCGDKSVSQIIID  218 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---------~ga~-~vi--~~~~~~~~~~~~~l~~  218 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.+         .+.. .++  |..+  .+.+.+.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~   93 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLVKS   93 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC--HHHHHHHHHH
Confidence            3678999987 8999999999989999 89999998776554321         1222 222  3222  1222222322


Q ss_pred             hcC--CCccEEEEcCC
Q 019535          219 MTD--GGADYCFECVG  232 (339)
Q Consensus       219 ~~~--g~~d~v~d~~g  232 (339)
                      ...  +++|++|+++|
T Consensus        94 ~~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.18  E-value=0.019  Score=49.82  Aligned_cols=79  Identities=22%  Similarity=0.334  Sum_probs=52.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCC---c-eE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGV---T-EF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga---~-~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+    ++.+.   . ..  .|..+  .+++.+.+.+..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   86 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN--EDETARAVDAVT   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC--HHHHHHHHHHHH
Confidence            4678999987 8999999999999999 899999988765543    23332   1 12  23333  122223333222


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  +++|++++++|.
T Consensus        87 ~~~g~id~lv~nAg~  101 (281)
T 3svt_A           87 AWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence            1  379999998884

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.17  E-value=0.029  Score=46.11  Aligned_cols=99  Identities=14%  Similarity=0.086  Sum_probs=63.5

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC-----------------ceEEeCCCC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-----------------TEFVNSKNC  207 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga-----------------~~vi~~~~~  207 (339)
                      ....+.++.+||.+|+|. |..+..+++. |+ +|++++.+++..+.+++. +.                 ..++..+- 
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-   91 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-   91 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-
Confidence            445567889999999874 7777788876 88 999999999998888653 11                 11222111 


Q ss_pred             CCccHHHHHHHhcCCCccEEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEec
Q 019535          208 GDKSVSQIIIDMTDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       208 ~~~~~~~~l~~~~~g~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ...+..+      .+.||+|++...     .   ...++++.+.|+++ |+++++.
T Consensus        92 ~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~~  140 (203)
T 1pjz_A           92 FALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  140 (203)
T ss_dssp             SSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            0011110      025999997321     1   12467889999998 9844443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.17  E-value=0.026  Score=51.85  Aligned_cols=96  Identities=14%  Similarity=0.115  Sum_probs=63.4

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCC--CEEEEEcCChhHHHHHH-hcC------Cce-EEeCCCCCCccHHHHHHHhcCC-
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGK-RFG------VTE-FVNSKNCGDKSVSQIIIDMTDG-  222 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~--~~Vi~~~~~~~~~~~~~-~~g------a~~-vi~~~~~~~~~~~~~l~~~~~g-  222 (339)
                      .+|+|+|+|.+|..+++.+...|.  .+|++.++++++.+.+. +++      ... .+|..+      .+.+.++..+ 
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d------~~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS------IEELVALINEV   75 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC------HHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC------HHHHHHHHHhh
Confidence            379999999999999998888873  38999999988876553 232      211 223222      1223333333 


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++|+||+|++.......+..++..+ -.++.+..
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred             CCCEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence            6899999998765456666777775 66666543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.15  E-value=0.022  Score=48.67  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHH-Hh---cCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIG-KR---FGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~-~~---~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+.+++++++  .+.+ ++   .+.. ..+  |..+  .+.+.+.+.+..  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD--KANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            568999987 8999999998888899 89999988766  4332 22   2422 222  3333  122222222221  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|++|+++|.
T Consensus        79 ~g~iD~lv~nAg~   91 (258)
T 3a28_C           79 LGGFDVLVNNAGI   91 (258)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            1379999998873

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.15  E-value=0.0048  Score=51.75  Aligned_cols=101  Identities=14%  Similarity=0.206  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.+...+.++.+||.+|+|. |..+..+++.. . +|++++.+++..+.+++.    +...++..+-      .+.+.  
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~------~~~~~--  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------TLGYE--  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------GGCCG--
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc------ccccc--
Confidence            45566788899999999875 88888888764 5 999999999988888663    2122332221      11000  


Q ss_pred             cCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+.+|+|+....-....+.+.+.|+++ |+++..-.
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            1237999997655444456888999997 99887743

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.15  E-value=0.056  Score=45.13  Aligned_cols=93  Identities=16%  Similarity=0.124  Sum_probs=59.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+.+|||+|+|.+|...++.+...|+ +|++++.... ..+.+.+.+....+. ..+...+         -.++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~d---------L~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-KKVGEED---------LLNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGG---------SSSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhH---------hCCCCEEEEC
Confidence            46889999999999999999999999 8888876543 233333333223332 2211111         1269999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++.+. .+..+...+.. |..|.....
T Consensus        99 T~d~~-~N~~I~~~ak~-gi~VNvvD~  123 (223)
T 3dfz_A           99 TNDQA-VNKFVKQHIKN-DQLVNMASS  123 (223)
T ss_dssp             CCCTH-HHHHHHHHSCT-TCEEEC---
T ss_pred             CCCHH-HHHHHHHHHhC-CCEEEEeCC
Confidence            99988 55555555555 888777654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.14  E-value=0.019  Score=51.61  Aligned_cols=79  Identities=25%  Similarity=0.281  Sum_probs=51.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-----------HHHHHhcCCce-E--EeCCCCCCccHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-----------FEIGKRFGVTE-F--VNSKNCGDKSVSQII  216 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-----------~~~~~~~ga~~-v--i~~~~~~~~~~~~~l  216 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++           .+.++..|... .  .|..+  .+.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~  120 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAAV  120 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHH
Confidence            5789999987 8999999999999999 89999987653           23334445322 2  23333  12222333


Q ss_pred             HHhcC--CCccEEEEcCCC
Q 019535          217 IDMTD--GGADYCFECVGL  233 (339)
Q Consensus       217 ~~~~~--g~~d~v~d~~g~  233 (339)
                      .+...  +++|++|+++|.
T Consensus       121 ~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            32221  379999999884

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.14  E-value=0.021  Score=49.48  Aligned_cols=78  Identities=15%  Similarity=0.169  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hh----cCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++.++.+.+ ++    .+.. ..  .|..+  .+.+.+.+.+... 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4788999987 8999999999999999 999999987765443 22    2432 22  23333  1222222332221 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +++|++++++|
T Consensus       103 ~g~id~lv~nAg  114 (277)
T 4fc7_A          103 FGRIDILINCAA  114 (277)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence             37999999987

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.13  E-value=0.045  Score=51.18  Aligned_cols=93  Identities=9%  Similarity=0.063  Sum_probs=60.6

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh-cCCce-EEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~-~ga~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.+|+|+|+|.+|.+++..+... +. +|+++++++++.+.+.+ .+... .++..+     . +.+.+... ++|+||+
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-----~-~~l~~~l~-~~DvVIn   94 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-----D-SALDKVLA-DNDVVIS   94 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-----H-HHHHHHHH-TSSEEEE
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-----H-HHHHHHHc-CCCEEEE
Confidence            46899999999999999888877 67 89999999887766543 34322 223222     1 12222211 5899999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |++..........++..+ -.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEEe
Confidence            998754334455566664 555554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.13  E-value=0.013  Score=50.34  Aligned_cols=78  Identities=13%  Similarity=0.197  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcC---CCEEEEEcCChhHHHHHHhc---CCc-eE--EeCCCCCCccHHHHHH---H
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCG---ATRIIGVDVISEKFEIGKRF---GVT-EF--VNSKNCGDKSVSQIII---D  218 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G---~~~Vi~~~~~~~~~~~~~~~---ga~-~v--i~~~~~~~~~~~~~l~---~  218 (339)
                      .+.++||.|+ |.+|...++.+...|   + +|+++++++++.+.++++   +.. .+  .|..+  .+.+.+.+.   +
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   96 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEG   96 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC--hHHHHHHHHHHHH
Confidence            4578999987 999999999998899   7 999999887654433332   321 22  23333  233333333   2


Q ss_pred             hcCC-CccEEEEcCC
Q 019535          219 MTDG-GADYCFECVG  232 (339)
Q Consensus       219 ~~~g-~~d~v~d~~g  232 (339)
                      ..+. ++|++|+++|
T Consensus        97 ~~g~~~id~li~~Ag  111 (267)
T 1sny_A           97 VTKDQGLNVLFNNAG  111 (267)
T ss_dssp             HHGGGCCSEEEECCC
T ss_pred             hcCCCCccEEEECCC
Confidence            2332 6999999887

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.12  E-value=0.011  Score=52.66  Aligned_cols=89  Identities=22%  Similarity=0.316  Sum_probs=61.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++.+.+..+.+|+..         .++.+.+.+     .|+|+-++
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~---------~~l~ell~~-----aDvV~l~~  208 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ---------VACSELFAS-----SDFILLAL  208 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE---------CCHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee---------CCHHHHHhh-----CCEEEEcC
Confidence            47899999999999999999999999 9999998875555555666421         123333322     57888776


Q ss_pred             CCH-H----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GLA-S----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~-~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.. .    .-...+..|+++ ..+|.++.
T Consensus       209 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  237 (330)
T 4e5n_A          209 PLNADTLHLVNAELLALVRPG-ALLVNPCR  237 (330)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            632 1    123566677776 77777754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.12  E-value=0.022  Score=49.24  Aligned_cols=79  Identities=19%  Similarity=0.289  Sum_probs=52.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceE---EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~v---i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+  .+.+.+.+.+..  .
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS--ESEIIEAFARLDEQG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHC
Confidence            4678999987 8999999999999999 999999988765544    23343322   22222  122222232221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++++++|.
T Consensus       102 g~iD~lv~nAg~  113 (271)
T 4ibo_A          102 IDVDILVNNAGI  113 (271)
T ss_dssp             CCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.11  E-value=0.07  Score=47.73  Aligned_cols=133  Identities=9%  Similarity=0.042  Sum_probs=81.4

Q ss_pred             EEEEEccCHHHHH-HHHHHHHc-CCCEEEEE-cCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGLGSIGLA-VAEGARLC-GATRIIGV-DVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~-a~~la~~~-G~~~Vi~~-~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|.|+|+|.+|.. .+...+.. ++ +++++ ++++++.+ +++++|..++++       ++.+.+.+   ..+|+|+-|
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~~---~~iDaV~I~   93 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLAS---DVIDAVYIP   93 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHHC---SSCSEEEEC
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhcC---CCCCEEEEe
Confidence            7899999999975 35555544 67 67655 45555544 456788776652       34333322   379999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCe-EEeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKI-LMGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      ++...-.+.+..+|..  |+-|++.-+.....- ...+... ..+++. +.++.   ......++.+-+++.+|+|
T Consensus        94 tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~---~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           94 LPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYM---ITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCG---GGGSHHHHHHHHHHHTTTT
T ss_pred             CCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeee---eecCHHHHHhhHhhhcCCC
Confidence            9988778888888887  688888654321111 1111122 223333 34432   1223457888888888866

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.10  E-value=0.036  Score=47.91  Aligned_cols=84  Identities=19%  Similarity=0.209  Sum_probs=58.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+++.|.. .+.+  +     .    .+.  ...|+||-|++.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~-----~----~~~--~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D-----L----SLL--QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C-----G----GGG--TTCSEEEECSCH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C-----H----HHh--CCCCEEEEECCH
Confidence            58899999999999998888999 899999999888888777753 2221  1     1    111  258999999987


Q ss_pred             HHHHHHHHHH----hhcCCcEEEEe
Q 019535          234 ASLVQEAYAC----CRKGWGKTIVL  254 (339)
Q Consensus       234 ~~~~~~~~~~----l~~~~G~~v~~  254 (339)
                      .. ....++.    +.++ ..++.+
T Consensus        68 ~~-~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QL-ILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HH-HHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HH-HHHHHHHHHhhCCCC-CEEEEC
Confidence            55 4444443    3343 455544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.10  E-value=0.017  Score=49.45  Aligned_cols=79  Identities=15%  Similarity=0.173  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|..+++.+.. .|+ +|+.+++++++.+.+    +..+.. .++  |..+  .+.+.+.+.+... 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   79 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHh
Confidence            4678999987 9999999988887 899 999999987665443    222321 222  3332  1223233332211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        80 ~g~id~li~~Ag~   92 (276)
T 1wma_A           80 YGGLDVLVNNAGI   92 (276)
T ss_dssp             HSSEEEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence             379999998873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.09  E-value=0.014  Score=49.56  Aligned_cols=79  Identities=23%  Similarity=0.273  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|++++++ +++.+.+    +..+.. .++  |..+  .+.+.+.+.+... 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT--SEACQQLVDEFVAK   82 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            3578999987 9999999999888999 89999987 6555433    222422 222  3222  1223233332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        83 ~g~id~vi~~Ag~   95 (258)
T 3afn_B           83 FGGIDVLINNAGG   95 (258)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.09  E-value=0.033  Score=48.24  Aligned_cols=34  Identities=29%  Similarity=0.242  Sum_probs=30.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence            4688999987 8999999999999999 89999886

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.07  E-value=0.032  Score=48.61  Aligned_cols=97  Identities=13%  Similarity=0.099  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceEEeCCCCCCccHHHHHHHhcC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++.+||-+|+| .|..+..+++..|+ +|++++.+++..+.+++    .|.   ..++..+-   .++     ....
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PCED  148 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SSCT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CCCC
Confidence            77889999999987 47888888888888 99999999988777754    232   12222221   111     1112


Q ss_pred             CCccEEEEcCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          222 GGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+|+|+....     . ...++.+.+.|+++ |+++....
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            37999986432     1 44588999999998 99988754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.07  E-value=0.026  Score=47.55  Aligned_cols=72  Identities=17%  Similarity=0.021  Sum_probs=48.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.+|||.|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..+...+ .|..+      .+.+.+... ++|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d------~~~~~~~~~-~~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD------ADSINPAFQ-GIDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS------HHHHHHHHT-TCSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC------HHHHHHHHc-CCCEE
Confidence            3578999987 99999999988888  78 999999987765543 1122222 23222      223333333 58999


Q ss_pred             EEcCC
Q 019535          228 FECVG  232 (339)
Q Consensus       228 ~d~~g  232 (339)
                      |++++
T Consensus        74 i~~a~   78 (253)
T 1xq6_A           74 VILTS   78 (253)
T ss_dssp             EECCC
T ss_pred             EEecc
Confidence            99886

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.06  E-value=0.042  Score=48.80  Aligned_cols=132  Identities=13%  Similarity=0.142  Sum_probs=75.5

Q ss_pred             EEEEEccCHHHHHH-HHHHHHcCCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEc
Q 019535          155 TVVIFGLGSIGLAV-AEGARLCGATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~a-~~la~~~G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~  230 (339)
                      +|.|+|+|.+|... +..++..+. +++ +.++++++.+. .+++|...++       .++.+    +... .+|+|+.|
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~----~l~~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEE----LVGDPDVDAVYVS   69 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHH----HHTCTTCCEEEEC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHH----HhcCCCCCEEEEe
Confidence            58899999999876 543333777 665 55667766554 4556753222       23333    2223 69999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      ++.....+.+..++..  |+-|++..+..... ....+..+ ..+++.+ .++.   ......++.+.+++.+|.+
T Consensus        70 tp~~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~---~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           70 TTNELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHH---LRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCC---GGGSHHHHHHHHHHHTTTT
T ss_pred             CChhHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeeh---hhcCHHHHHHHHHHHcCCC
Confidence            9987767777888877  56666643211110 00111222 1234443 3332   1122357788888888765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.05  E-value=0.034  Score=49.38  Aligned_cols=77  Identities=16%  Similarity=0.165  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHh-cCC-ceEEeCCCCCCccHHHHHHHhcC-CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTD-GG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~----~~~~-~ga-~~vi~~~~~~~~~~~~~l~~~~~-g~  223 (339)
                      .+.+|||.|+ |.+|...++.+...|+ +|++++++.++.+    .+.. .+. ..++..+-   .+ .+.+.++.. ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDV---SD-ERALARIFDAHP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT---TC-HHHHHHHHHHSC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeec---CC-HHHHHHHHhccC
Confidence            4568999987 9999999999999999 8999988654322    2221 121 12222111   11 122333332 37


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+||++++.
T Consensus        79 ~d~vih~A~~   88 (341)
T 3enk_A           79 ITAAIHFAAL   88 (341)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECccc
Confidence            9999999874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.05  E-value=0.026  Score=49.08  Aligned_cols=91  Identities=10%  Similarity=-0.029  Sum_probs=59.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC---ceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga---~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.+++|+|+|++|.+++..+...|+++|+++.+++++.+.+ ++++.   ..+.+.++            +. ..+|+|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~-~~aDiI  191 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK-QSYDVI  191 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC-SCEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc-CCCCEE
Confidence            578999999999999999988889977999999998876554 33432   23333322            11 368999


Q ss_pred             EEcCCCHHHHH---HHHHHhhcCCcEEEEecc
Q 019535          228 FECVGLASLVQ---EAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g~~~~~~---~~~~~l~~~~G~~v~~g~  256 (339)
                      |+|++....-+   .....++++ ..++++..
T Consensus       192 InaTp~gm~~~~~~l~~~~l~~~-~~V~DlvY  222 (281)
T 3o8q_A          192 INSTSASLDGELPAIDPVIFSSR-SVCYDMMY  222 (281)
T ss_dssp             EECSCCCC----CSCCGGGEEEE-EEEEESCC
T ss_pred             EEcCcCCCCCCCCCCCHHHhCcC-CEEEEecC
Confidence            99997543111   012345554 55556543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.05  E-value=0.022  Score=49.53  Aligned_cols=79  Identities=15%  Similarity=0.221  Sum_probs=50.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .+.++||.|+ |.+|..+++.+...|+ +|+++.+++++.+.+    ++.+.. ..  .|..+  .+.+.+.+.+..  .
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC--HHHHHHHHHHHHHhc
Confidence            3578999987 8999999998888899 899888877665443    223432 22  23333  122223232221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       120 ~~id~li~~Ag~  131 (285)
T 2c07_A          120 KNVDILVNNAGI  131 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.04  E-value=0.013  Score=50.75  Aligned_cols=78  Identities=26%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC---c-eE--EeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV---T-EF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga---~-~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|+++++++++.+.+.    ..+.   . .+  .|..+  .+.+.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence            4678899987 8999999999999999 9999999887665442    2232   1 22  23333  122222222221


Q ss_pred             C--CCccEEEEcCC
Q 019535          221 D--GGADYCFECVG  232 (339)
Q Consensus       221 ~--g~~d~v~d~~g  232 (339)
                      .  +++|++|+++|
T Consensus        82 ~~~g~iD~lv~nAg   95 (280)
T 1xkq_A           82 KQFGKIDVLVNNAG   95 (280)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  37999999887

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.04  E-value=0.0088  Score=50.76  Aligned_cols=75  Identities=8%  Similarity=-0.047  Sum_probs=50.4

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-c--CChhHHHHHH-hc-CCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-D--VISEKFEIGK-RF-GVTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~--~~~~~~~~~~-~~-ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+.+ +  +++++.+.+. ++ +. .+.+..+  ...+.+.+.+.. +++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~-g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK--PERLVDATLQHG-EAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC--GGGHHHHHGGGS-SCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH--HHHHHHHHHHHc-CCCCE
Confidence            357899987 8999999999999999 89999 6  8877766543 34 32 2333222  233444443332 37999


Q ss_pred             EEEcCC
Q 019535          227 CFECVG  232 (339)
Q Consensus       227 v~d~~g  232 (339)
                      +|+++|
T Consensus        76 lv~~Ag   81 (244)
T 1zmo_A           76 IVSNDY   81 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.04  E-value=0.02  Score=49.34  Aligned_cols=81  Identities=19%  Similarity=0.265  Sum_probs=50.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHH----HhcCCc-eEEeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~----~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .++++||.|+ |++|.++++.+...|+ +|+.++++ ++..+.+    ++.+.. .++..+-...+.+.+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999987 8999999999989999 89999884 3333333    334432 2332222111223333333221  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|+++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.03  E-value=0.036  Score=48.01  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=50.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+    +..|.. ..  .|..+  .+.+.+.+.+... 
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  104 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            5678999987 8999999999999999 8988875 55544333    233432 22  23333  2333333333222 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus       105 ~g~iD~lvnnAg~  117 (280)
T 4da9_A          105 FGRIDCLVNNAGI  117 (280)
T ss_dssp             HSCCCEEEEECC-
T ss_pred             cCCCCEEEECCCc
Confidence             379999998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.02  E-value=0.017  Score=49.26  Aligned_cols=78  Identities=19%  Similarity=0.190  Sum_probs=49.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+.+++ ++++.+.+    +..+.. .++  |..+  .+.+.+.+.+... 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            3678999987 9999999998888999 8999998 66554433    223432 222  3222  1222232332211 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +++|++|+++|
T Consensus        83 ~g~id~li~~Ag   94 (261)
T 1gee_A           83 FGKLDVMINNAG   94 (261)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999887

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.02  E-value=0.049  Score=47.32  Aligned_cols=41  Identities=20%  Similarity=0.444  Sum_probs=36.4

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      .+|.|+|+|.+|...++.+...|+ +|++.++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 99999999988776644

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.02  E-value=0.029  Score=47.80  Aligned_cols=101  Identities=21%  Similarity=0.343  Sum_probs=67.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +.......++.+||.+|+| .|..+..+++.. . +|++++.+++..+.+++.    |..  .++..+-   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            4455667789999999987 477777777654 5 999999999888877652    322  2222221   111     


Q ss_pred             HhcCCCccEEEEcCCC------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+..+.||+|+....-      ...++++.+.|+++ |+++....
T Consensus        98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~~  141 (260)
T 1vl5_A           98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  141 (260)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence            1122379999965332      35588999999998 99988653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.01  E-value=0.029  Score=48.72  Aligned_cols=34  Identities=29%  Similarity=0.322  Sum_probs=30.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            4788999987 8999999999999999 89998776

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.01  E-value=0.037  Score=49.48  Aligned_cols=91  Identities=11%  Similarity=0.107  Sum_probs=63.1

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.|+|.|.+|...+..++..|. +|++.++++++.+.++++|+.. .       .+..+.+.+. ....|+||-|++.
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~-~-------~~~~e~~~~a-~~~aDlVilavP~   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDV-S-------ADLEATLQRA-AAEDALIVLAVPM   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCE-E-------SCHHHHHHHH-HHTTCEEEECSCH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee-e-------CCHHHHHHhc-ccCCCEEEEeCCH
Confidence            579999999999999999999998 8999999999999888888742 1       2333333321 1146999999986


Q ss_pred             HHHHHHHHHH---hhcCCcEEEEecc
Q 019535          234 ASLVQEAYAC---CRKGWGKTIVLGV  256 (339)
Q Consensus       234 ~~~~~~~~~~---l~~~~G~~v~~g~  256 (339)
                      .. ....++.   +.++ ..++.++.
T Consensus        79 ~~-~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TA-IDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HH-HHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HH-HHHHHHHHHccCCC-CEEEEcCC
Confidence            54 3333332   3443 45555554

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.00  E-value=0.031  Score=48.80  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=31.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ...+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            357899999999999999999999998999988664

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.00  E-value=0.021  Score=49.21  Aligned_cols=79  Identities=16%  Similarity=0.181  Sum_probs=49.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.++++.+...|+ +|+.+++ ++++.+.+    +..+.. ..+  |..+  .+.+.+.+.+... 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ--ESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678899987 8999999999999999 8888877 44444433    233432 222  3333  1222222322221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus       104 ~g~id~lv~nAg~  116 (269)
T 4dmm_A          104 WGRLDVLVNNAGI  116 (269)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.00  E-value=0.023  Score=49.42  Aligned_cols=79  Identities=24%  Similarity=0.321  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-----------HHHHHhcCCce-EE--eCCCCCCccHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-----------FEIGKRFGVTE-FV--NSKNCGDKSVSQII  216 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-----------~~~~~~~ga~~-vi--~~~~~~~~~~~~~l  216 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++           .+.++..+... .+  |..+  .+.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence            4678999987 8999999999999999 99999988652           22233344322 22  3333  12222223


Q ss_pred             HHhcC--CCccEEEEcCCC
Q 019535          217 IDMTD--GGADYCFECVGL  233 (339)
Q Consensus       217 ~~~~~--g~~d~v~d~~g~  233 (339)
                      .+...  +++|++|+++|.
T Consensus        85 ~~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            32221  379999998874

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.00  E-value=0.024  Score=51.09  Aligned_cols=48  Identities=23%  Similarity=0.285  Sum_probs=40.4

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVT  199 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~~ga~  199 (339)
                      -.+.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+. ++++|+.
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            468999999999999999999999999 89999988887664 4446653

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.00  E-value=0.019  Score=50.80  Aligned_cols=98  Identities=12%  Similarity=0.082  Sum_probs=64.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--------CceEEeCCCCCCccHHHHHHHhcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--------VTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--------a~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        ...+ ....   .+..+.+.. ..+
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv-~~~~---~D~~~~l~~-~~~  180 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL-DLFC---GDGFEFLKN-HKN  180 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTE-EEEC---SCHHHHHHH-CTT
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCE-EEEE---ChHHHHHHh-cCC
Confidence            4568999998763 667777777655449999999999888887631        1111 1112   345444443 334


Q ss_pred             CccEEEEcCCC----------HHHHHHHHHHhhcCCcEEEEec
Q 019535          223 GADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       223 ~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .||+||--...          ...++.+.+.|+++ |.++.-.
T Consensus       181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             CEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            89999843311          34578899999997 9988764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.00  E-value=0.018  Score=50.02  Aligned_cols=41  Identities=22%  Similarity=0.257  Sum_probs=35.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            3678999987 8999999999989999 899999988776554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.99  E-value=0.018  Score=49.82  Aligned_cols=77  Identities=16%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC---CceE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g---a~~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      +++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+. ++.   ....  .|..+  .+.+.+.+.+...  +++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD--RAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence            67899987 8999999999999999 9999999887766543 232   1122  23333  1223333333222  368


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++|+++|.
T Consensus        99 D~lvnnAG~  107 (272)
T 2nwq_A           99 RGLINNAGL  107 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998863

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.99  E-value=0.07  Score=45.78  Aligned_cols=79  Identities=14%  Similarity=0.180  Sum_probs=48.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++ ++.+..+..    +..+.. .+  .|..+  .+.+.+.+.+... 
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD--FESCERCAEKVLAD  100 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4678899987 8999999999999999 888887 444433332    223322 22  23333  1222222222221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus       101 ~g~id~li~nAg~  113 (269)
T 3gk3_A          101 FGKVDVLINNAGI  113 (269)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998874

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.98  E-value=0.068  Score=47.95  Aligned_cols=134  Identities=13%  Similarity=0.127  Sum_probs=80.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc--CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          154 STVVIFGLGSIGLAVAEGARLC--GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      -+|.|+|+|.+|...+..++..  ++ +++ +.++++++.+. ++++|+ .++       .++.+.+.+   ..+|+|+.
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~---~~~D~V~i   81 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ---TDADIVIL   81 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH---CCCSEEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC---CCCCEEEE
Confidence            4799999999998877776665  67 655 55667776554 455776 333       234444432   36999999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      |++.....+.+..++..  |+-|++..+..... -...+... ..++..+ .++..   .....++.+.+++.+|++-
T Consensus        82 ~tp~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~---r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           82 TTPSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQN---RRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGG---GGSHHHHHHHHHHHTTTTC
T ss_pred             CCCcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcc---cCCHHHHHHHHHHhcCCCC
Confidence            99988767778888877  56677754321110 01111122 2234433 34321   1234577888888888663

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.96  E-value=0.042  Score=48.99  Aligned_cols=87  Identities=17%  Similarity=0.121  Sum_probs=61.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++++.  +++. +.    ..    .++.+.+.+     .|+|+.++
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~~----~~l~ell~~-----aDvV~l~~  207 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----YV----DSLDDLYKQ-----ADVISLHV  207 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----BC----SCHHHHHHH-----CSEEEECS
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----ec----CCHHHHHhh-----CCEEEEcC
Confidence            46799999999999999999999999 999999887654  2332 22    11    133333322     69999888


Q ss_pred             CCHHH----H-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLASL----V-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~~----~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +....    + +..+..++++ ..+|.++.
T Consensus       208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          208 PDVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            74321    1 3566788886 88888864

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.95  E-value=0.022  Score=50.38  Aligned_cols=94  Identities=11%  Similarity=0.088  Sum_probs=65.5

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhc-CC---c--eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          154 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF-GV---T--EFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~-ga---~--~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +.   .  .++.      .+..+.+.....+.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccCCCCCE
Confidence            3899998764 77778888865 66 999999999999888763 31   1  2221      34555554443458999


Q ss_pred             EEE-cCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          227 CFE-CVG---------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       227 v~d-~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ||- ...         ....++.+.+.|+++ |.++....
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence            984 321         134588999999998 98877654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.95  E-value=0.012  Score=50.45  Aligned_cols=90  Identities=13%  Similarity=0.064  Sum_probs=57.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .+ +++|+|+|++|.+++..+...|+++|+++.+++++.+.+.+ ++   ....     .++.+.+.     .+|+||+|
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~~~~-----~~~~~~~~-----~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---IFSL-----DQLDEVVK-----KAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---EEEG-----GGHHHHHH-----TCSEEEEC
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---cCCH-----HHHHhhhc-----CCCEEEEC
Confidence            45 89999999999999999999998789999999877655432 22   1222     22333222     48999998


Q ss_pred             CCCHH---HHHHHHHHhhcCCcEEEEecc
Q 019535          231 VGLAS---LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       231 ~g~~~---~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++...   ........++++ ..++++..
T Consensus       174 tp~gm~p~~~~i~~~~l~~~-~~V~Divy  201 (253)
T 3u62_A          174 TSVGMKGEELPVSDDSLKNL-SLVYDVIY  201 (253)
T ss_dssp             SSTTTTSCCCSCCHHHHTTC-SEEEECSS
T ss_pred             CCCCCCCCCCCCCHHHhCcC-CEEEEeeC
Confidence            86321   000113446665 66666643

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.94  E-value=0.029  Score=49.70  Aligned_cols=81  Identities=25%  Similarity=0.310  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC----------hhHHHH----HHhcCCceEEeCCCCCCc-cHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI----------SEKFEI----GKRFGVTEFVNSKNCGDK-SVSQI  215 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~----------~~~~~~----~~~~ga~~vi~~~~~~~~-~~~~~  215 (339)
                      .++++||.|+ |++|.+.++.+...|+ +|+.++++          .++.+.    ++..+.......-+.... .+.+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4678999987 8999999999989999 99999876          333332    233443322222221112 22222


Q ss_pred             HHHhcC--CCccEEEEcCCC
Q 019535          216 IIDMTD--GGADYCFECVGL  233 (339)
Q Consensus       216 l~~~~~--g~~d~v~d~~g~  233 (339)
                      +.+...  +++|++|+++|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            222221  379999998874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.94  E-value=0.038  Score=49.25  Aligned_cols=89  Identities=21%  Similarity=0.250  Sum_probs=62.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|. +|++.++++++.+.+.++|....         ++.+.+.     ..|+|+.++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~e~l~-----~aDvVi~~v  218 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV---------STPELAA-----QSDFIVVAC  218 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC---------CHHHHHh-----hCCEEEEeC
Confidence            46789999999999999999999999 89999987766665665664321         2222232     269999888


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...    .+ ...+..++++ ..++.++.
T Consensus       219 p~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          219 SLTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            6532    12 3556778876 66666653

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.94  E-value=0.031  Score=49.16  Aligned_cols=99  Identities=16%  Similarity=0.050  Sum_probs=66.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--------C--ceEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--------V--TEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--------a--~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        .  ..++.      .+..+.+...
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            35678999998764 667777777655459999999998888776531        1  12222      3444433322


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+.||+|+-....          ...++.+.+.|+++ |.++....
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            33489999842211          34588999999998 99988753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.93  E-value=0.078  Score=51.34  Aligned_cols=101  Identities=15%  Similarity=0.216  Sum_probs=63.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hHHHH----HHhcCCceEEeCCCCCCccHH---H
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEI----GKRFGVTEFVNSKNCGDKSVS---Q  214 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~----~~~~ga~~vi~~~~~~~~~~~---~  214 (339)
                      .++++||.|+ +++|++.++.+...|+ +|++++++.         ++.+.    ++..|...+.|..+  ..+..   +
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d--~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN--VLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC--TTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC--HHHHHHHHH
Confidence            3577888887 7999999999999999 899887643         33322    23345445556555  23333   3


Q ss_pred             HHHHhcCCCccEEEEcCCCH-------------------------HHHHHHHHHhhc-CCcEEEEecc
Q 019535          215 IIIDMTDGGADYCFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGV  256 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  256 (339)
                      .+.+.. |++|++++++|..                         ...+.++..|.. +.|++|.++.
T Consensus        84 ~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           84 TAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            333322 4799999988740                         124455556632 1389999875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.93  E-value=0.0069  Score=51.67  Aligned_cols=89  Identities=26%  Similarity=0.377  Sum_probs=56.5

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHH--HHHHHhc---CCCccEE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS--QIIIDMT---DGGADYC  227 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~--~~l~~~~---~g~~d~v  227 (339)
                      +++||.|+ |.+|.++++.+...|+ +|+++++++++.+.      .     -.   .|+.  +.++++.   .+++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~-----~~---~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D-----LS---TAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C-----TT---SHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c-----cc---cCCCCHHHHHHHHHHhCCCCCEE
Confidence            36899987 8999999999989999 89999987653211      0     00   1221  1222222   2478999


Q ss_pred             EEcCCCHH------------------HHHHHHHHhhcC-CcEEEEeccC
Q 019535          228 FECVGLAS------------------LVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       228 ~d~~g~~~------------------~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      |+++|...                  ..+.+++.+... .|++|.++..
T Consensus        67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            99887432                  134455555331 2799988754

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.93  E-value=0.074  Score=47.70  Aligned_cols=132  Identities=11%  Similarity=0.063  Sum_probs=79.3

Q ss_pred             CEEEEEccCHHHH-HHHHHHHHc-CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEE
Q 019535          154 STVVIFGLGSIGL-AVAEGARLC-GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  228 (339)
Q Consensus       154 ~~VLI~G~G~iG~-~a~~la~~~-G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~  228 (339)
                      -+|.|+|+|.+|. ..+..++.. ++ +++ +.++++++.+. ++++|...+        .++.+    +... .+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~--------~~~~~----ll~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPV--------EGYPA----LLERDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEE--------ESHHH----HHTCTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCc--------CCHHH----HhcCCCCCEEE
Confidence            4799999999998 555555555 77 665 44666666554 456776543        12322    2223 799999


Q ss_pred             EcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          229 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      .|++...-.+.+..++..  |+-|++..+.....- ...+... ..+++.+ .++.   ......++.+.+++.+|++
T Consensus        95 i~tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~---~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFM---FLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG---GGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEec---ccCCHHHHHHHHHHhcCCC
Confidence            999988878888888877  566777543211110 1111222 2234433 3332   1223567888888888866

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.93  E-value=0.08  Score=45.76  Aligned_cols=90  Identities=17%  Similarity=0.286  Sum_probs=60.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g  232 (339)
                      +|.|+|+|.+|.+.++.+...|.. +|++.++++++.+.++++|...... .+     ..+.+     . ..|+||.|++
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~-----~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-TS-----IAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-SC-----GGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-CC-----HHHHh-----cCCCCEEEEcCC
Confidence            689999999999999988888852 6999999998888888888642111 11     11111     2 4899999998


Q ss_pred             CHHHH---HHHHHHhhcCCcEEEEecc
Q 019535          233 LASLV---QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~~~~---~~~~~~l~~~~G~~v~~g~  256 (339)
                      .....   +.....+.++ ..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            76532   2233445564 55555543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.92  E-value=0.03  Score=48.34  Aligned_cols=79  Identities=23%  Similarity=0.249  Sum_probs=50.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-------HH----HHHhcCCce-E--EeCCCCCCccHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FE----IGKRFGVTE-F--VNSKNCGDKSVSQII  216 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-------~~----~~~~~ga~~-v--i~~~~~~~~~~~~~l  216 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.++++.++       .+    .++..+... .  .|..+  .+.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   81 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE--EDQVRAAV   81 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC--HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHH
Confidence            4678999987 8999999999999999 89999987643       11    222334321 2  23333  12222222


Q ss_pred             HHhcC--CCccEEEEcCCC
Q 019535          217 IDMTD--GGADYCFECVGL  233 (339)
Q Consensus       217 ~~~~~--g~~d~v~d~~g~  233 (339)
                      .+...  +++|++++++|.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            22221  379999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.92  E-value=0.084  Score=44.99  Aligned_cols=34  Identities=29%  Similarity=0.330  Sum_probs=30.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +.+|+|+|+|++|..++..+...|..++..++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5789999999999999999999999888888654

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.92  E-value=0.058  Score=46.98  Aligned_cols=74  Identities=23%  Similarity=0.232  Sum_probs=54.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. +  .     .+..+.+.     ..|+||-|++.+
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~-----~~~~~~~~-----~~Dvvi~~vp~~   67 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQ-V--V-----SSPADVAE-----KADRIITMLPTS   67 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCE-E--C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCe-e--c-----CCHHHHHh-----cCCEEEEeCCCH
Confidence            58899999999999888888898 899999999888888776642 1  1     12333332     268999998766


Q ss_pred             HHHHHHHH
Q 019535          235 SLVQEAYA  242 (339)
Q Consensus       235 ~~~~~~~~  242 (339)
                      ...+..+.
T Consensus        68 ~~~~~v~~   75 (296)
T 2gf2_A           68 INAIEAYS   75 (296)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            54666554

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.91  E-value=0.067  Score=47.52  Aligned_cols=132  Identities=17%  Similarity=0.167  Sum_probs=79.7

Q ss_pred             EEEEEccCHHHHHHHHHHHHc-CCCEEE-EEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC-GATRII-GVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|..  +       .++.+.+.+   ..+|+|+.|+
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~-------~~~~~~l~~---~~~D~V~i~t   71 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V-------RTIDAIEAA---ADIDAVVICT   71 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E-------CCHHHHHHC---TTCCEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c-------CCHHHHhcC---CCCCEEEEeC
Confidence            689999999998888777665 67 666 466677765544 556764  2       233333321   2689999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      +.....+.+..++..  |+-|++..+...... ...+... ..++..+ .++.   ......++.+.+++.+|++-
T Consensus        72 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           72 PTDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN---RRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG---GGGCHHHHHHHHHHHTTTTC
T ss_pred             CchhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc---ccCCHHHHHHHHHHHcCCCC
Confidence            988878888888877  566777543211100 1111222 2234433 3332   12234578888888888663

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.91  E-value=0.036  Score=47.92  Aligned_cols=92  Identities=11%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      +...+.+++|+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++..  +.. .   ..         ...+|+|
T Consensus       115 ~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~-~---~~---------~~~~Div  179 (271)
T 1npy_A          115 HLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN-S---LE---------NQQADIL  179 (271)
T ss_dssp             TCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES-C---CT---------TCCCSEE
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch-h---hh---------cccCCEE
Confidence            344567899999999999999989999987899999998775544 556642  111 1   00         0258999


Q ss_pred             EEcCCCHHH-------HHHHHHHhhcCCcEEEEecc
Q 019535          228 FECVGLASL-------VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g~~~~-------~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |+|++....       .......+.++ ..++++..
T Consensus       180 InaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          180 VNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             EECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             EECCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            999875431       11123456675 66777754

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.91  E-value=0.059  Score=48.18  Aligned_cols=134  Identities=18%  Similarity=0.226  Sum_probs=80.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHc-CCCEEEE-EcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC-GATRIIG-VDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~-G~~~Vi~-~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +|.|+|+|.+|...+..++.. ++ ++++ .++++++.+. ++++|...++       .++.+.+.+   ..+|+|+.|+
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~---~~~D~V~i~t   72 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY-------KDPHELIED---PNVDAVLVCS   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE-------SSHHHHHHC---TTCCEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee-------CCHHHHhcC---CCCCEEEEcC
Confidence            689999999998876666554 56 6664 5667776554 4567765454       234333321   2699999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHH-hhcCCe-EEeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEV-LHSGKI-LMGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      +.....+.+..++..  |+-|++..+..... -...+... ..++.. +.++.   ......++.+.+++.+|.+-
T Consensus        73 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~---~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           73 STNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFN---RRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECG---GGGCHHHHHHHHHHHTTTTS
T ss_pred             CCcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeec---ccCCHHHHHHHHHHHcCCCC
Confidence            988767778888877  56666654321110 01111222 223333 33432   22234577888888888663

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.90  E-value=0.024  Score=52.72  Aligned_cols=103  Identities=16%  Similarity=0.211  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHH-cCC--CEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCc
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARL-CGA--TRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~-~G~--~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ++....+|||+|+|++|+.++.++.. .+.  ..|+.++..+...+..+..|.... ...+.   .+..+.+..+..++ 
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vda---dnv~~~l~aLl~~~-   84 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITP---QNYLEVIGSTLEEN-   84 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCT---TTHHHHTGGGCCTT-
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccc---hhHHHHHHHHhcCC-
Confidence            45566789999999999999877754 444  267888776665555556664322 22223   55555565565545 


Q ss_pred             cEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          225 DYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       225 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      |+|++++.....+..+-.|+..+ -.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99999887666577788888886 77788764

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.89  E-value=0.023  Score=51.05  Aligned_cols=89  Identities=22%  Similarity=0.324  Sum_probs=60.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.++++++. ..+.+|+..+        .++.+.+.+     .|+|+-++
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~~-----aDvV~l~~  231 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLFH-----SDCVTLHC  231 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHhc-----CCEEEEcC
Confidence            57899999999999999999999999 899998765542 2345565321        123333322     68888776


Q ss_pred             CCHH----HH-HHHHHHhhcCCcEEEEecc
Q 019535          232 GLAS----LV-QEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~----~~-~~~~~~l~~~~G~~v~~g~  256 (339)
                      +...    .+ ...+..++++ ..+|.++.
T Consensus       232 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  260 (347)
T 1mx3_A          232 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  260 (347)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence            5421    12 4556677776 77777764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.88  E-value=0.031  Score=47.94  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHHHh-cCCceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~~~-~ga~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   |.+|.+.++.+...|+ +|+.+++++   +..+.+.+ .+...++  |..+  .+.+.+.+.+... 
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE--DASIDTMFAELGKV   84 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678999974   6999999999989999 899998876   22333322 3432333  3333  1223333333322 


Q ss_pred             -CCccEEEEcCC
Q 019535          222 -GGADYCFECVG  232 (339)
Q Consensus       222 -g~~d~v~d~~g  232 (339)
                       +++|++|+++|
T Consensus        85 ~g~iD~lv~~Ag   96 (265)
T 1qsg_A           85 WPKFDGFVHSIG   96 (265)
T ss_dssp             CSSEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999887

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.88  E-value=0.028  Score=50.30  Aligned_cols=88  Identities=22%  Similarity=0.256  Sum_probs=60.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++...+...  |+..+        .++.+.+.     ..|+|+-++
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~-----~sDvV~l~~  235 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG-----ASDIFLIAA  235 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH-----TCSEEEECS
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh-----hCCEEEEec
Confidence            36899999999999999999999999 9999998765443322  43221        13333332     368888877


Q ss_pred             CCH-HH----HHHHHHHhhcCCcEEEEecc
Q 019535          232 GLA-SL----VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~-~~----~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.. .+    -...+..|+++ ..+|.++.
T Consensus       236 Plt~~T~~li~~~~l~~mk~g-ailIN~aR  264 (345)
T 4g2n_A          236 PGRPELKGFLDHDRIAKIPEG-AVVINISR  264 (345)
T ss_dssp             CCCGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            632 11    24667788886 77777764

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.86  E-value=0.038  Score=47.36  Aligned_cols=102  Identities=17%  Similarity=0.247  Sum_probs=70.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC---ceEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV---TEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga---~~vi~~~~~~~~~~~~~l  216 (339)
                      +....++.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    |.   ..++..+-   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            45667788999999999875 7888888888888 999999999887777542    32   22332221   111    


Q ss_pred             HHhcCCCccEEEEc-----CC-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFEC-----VG-LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~-----~g-~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       ....+.+|+|+..     .. ....++.+.+.|+++ |+++....
T Consensus       124 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 -PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             -CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             -CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence             1112379999842     22 244588889999997 99887754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.86  E-value=0.035  Score=49.23  Aligned_cols=78  Identities=22%  Similarity=0.209  Sum_probs=50.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC---------ChhHHHH----HHhcCCceEEeCCCCCCccHHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV---------ISEKFEI----GKRFGVTEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~---------~~~~~~~----~~~~ga~~vi~~~~~~~~~~~~~l~  217 (339)
                      .+.++||.|+ |++|..+++.+...|+ +|+++++         +.++.+.    ++..+...+.|..+  ..++.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            4678899987 8999999999999999 8888643         4444332    23345444566655  233333333


Q ss_pred             Hhc--CCCccEEEEcCC
Q 019535          218 DMT--DGGADYCFECVG  232 (339)
Q Consensus       218 ~~~--~g~~d~v~d~~g  232 (339)
                      +..  .+++|++|+++|
T Consensus        85 ~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHTSCCCEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            221  237999999887

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.86  E-value=0.016  Score=49.95  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=49.1

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      ...++++||.|+ |++|.+.++.+...|+ +|+.++++++...   . .... ..|..+  .+.+.+.+.+...  +++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTN--EEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            346889999987 8999999999999999 8999988765431   1 1111 233333  1223233332221  3799


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      ++|+++|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.86  E-value=0.039  Score=48.07  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=34.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG  193 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~  193 (339)
                      .+.++||.|+ |++|.+.++.+...|+ +|+.++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            3678899987 8999999999999999 899999 887765443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.85  E-value=0.033  Score=47.38  Aligned_cols=80  Identities=15%  Similarity=0.229  Sum_probs=49.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhc--CCc-eE--EeCCCCCC-ccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRF--GVT-EF--VNSKNCGD-KSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~--ga~-~v--i~~~~~~~-~~~~~~l~~~~~-  221 (339)
                      .+.++||+|+ |.+|.++++.+...|+++|+.++++++  ..+.+++.  +.. .+  .|..+  . +.+.+.+.+... 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence            3678999987 899999999999999944888888753  33334332  221 22  23332  1 223332332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        82 ~g~id~lv~~Ag~   94 (254)
T 1sby_A           82 LKTVDILINGAGI   94 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence             379999999873

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.85  E-value=0.025  Score=48.32  Aligned_cols=77  Identities=19%  Similarity=0.333  Sum_probs=48.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhc-CCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMT-DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~-~g~~d~  226 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.++++.++  ..+.++.. ..  .|..+  .+++.+.+.... .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD--EAAVASALDLAETMGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC--HHHHHHHHHHHHHHSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhCCCCE
Confidence            3678999987 8999999999889999 89999875443  33444432 22  23333  122222222111 247999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +++++|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999883

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.84  E-value=0.021  Score=49.16  Aligned_cols=74  Identities=20%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHH-HHHHHhc--CCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS-QIIIDMT--DGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~-~~l~~~~--~g~~d~v  227 (339)
                      .++++||.|+ |++|.++++.+...|+ +|+.++++.++.+....+    ..|..+   .+.. +.+.+..  -+++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~---~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE---AAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS---HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC---HHHHHHHHHHHHHhcCCCCEE
Confidence            4678999987 8999999999999999 999998876543221111    112222   2222 2222221  1379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      ++++|.
T Consensus        99 vnnAg~  104 (266)
T 3uxy_A           99 VNNAGV  104 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998874

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.82  E-value=0.0055  Score=52.82  Aligned_cols=95  Identities=19%  Similarity=0.232  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHc---CCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLC---GATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~---G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ++++.+||-+|+|. |..+..+++..   |+ +|++++.+++..+.+++    .+..   .++..+-          .++
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~----------~~~  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI----------RDI  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT----------TTC
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc----------ccc
Confidence            78999999999873 78888888865   56 89999999998888765    2322   2222111          112


Q ss_pred             cCCCccEEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..+.+|+|+-...     .   ...++.+.+.|+|+ |++++....
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~~  180 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEKF  180 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEB
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEecc
Confidence            2236888875322     1   23478899999998 999887543

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.82  E-value=0.029  Score=50.59  Aligned_cols=87  Identities=26%  Similarity=0.372  Sum_probs=58.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+...|+..         .++.+.+.     ..|+|+-+.
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~  238 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP---------ASLEDVLT-----KSDFIFVVA  238 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE---------CCHHHHHH-----SCSEEEECS
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee---------CCHHHHHh-----cCCEEEEcC
Confidence            37899999999999999999999999 999999875 334445556431         12322222     257777665


Q ss_pred             CCH-H----HHHHHHHHhhcCCcEEEEec
Q 019535          232 GLA-S----LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~-~----~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.. .    .-...+..|+++ ..+|.++
T Consensus       239 Plt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          239 AVTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             CSSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             cCCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            532 1    113556667775 6777665

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.81  E-value=0.033  Score=48.25  Aligned_cols=79  Identities=18%  Similarity=0.305  Sum_probs=50.4

Q ss_pred             CCCEEEEEcc-CH--HHHHHHHHHHHcCCCEEEEEcCCh--hHHHHHHh-cCCceEE--eCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVIS--EKFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~--iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~-~ga~~vi--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++++||.|+ |.  +|.+.++.+...|+ +|+.++++.  +..+.+.+ .+...++  |..+  .+.+.+.+.+..  -
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS--DQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC--HHHHHHHHHHHHHHc
Confidence            4678999985 44  99999999889999 899999876  44444433 3432333  3333  122333333222  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999998873

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.81  E-value=0.0078  Score=50.69  Aligned_cols=100  Identities=9%  Similarity=0.082  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~  217 (339)
                      ......++.+||-+|+|. |..++.+++.. +. +|++++.+++..+.+++    .|..   .++..+      ..+.+.
T Consensus        65 ~~~~~~~~~~vLDiG~G~-G~~~~~la~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~  136 (232)
T 3ntv_A           65 QLIRMNNVKNILEIGTAI-GYSSMQFASISDDI-HVTTIERNETMIQYAKQNLATYHFENQVRIIEGN------ALEQFE  136 (232)
T ss_dssp             HHHHHHTCCEEEEECCSS-SHHHHHHHTTCTTC-EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC------GGGCHH
T ss_pred             HHHhhcCCCEEEEEeCch-hHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC------HHHHHH
Confidence            334456788999999863 77777788754 45 99999999988877754    3432   333322      222222


Q ss_pred             -HhcCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          218 -DMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 -~~~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .+ .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       137 ~~~-~~~fD~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~d~  176 (232)
T 3ntv_A          137 NVN-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQ-GLVITDN  176 (232)
T ss_dssp             HHT-TSCEEEEEEETTSSSHHHHHHHHGGGEEEE-EEEEEEC
T ss_pred             hhc-cCCccEEEEcCcHHHHHHHHHHHHHhcCCC-eEEEEee
Confidence             22 3489999843322   34477888999997 9887743

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.80  E-value=0.021  Score=48.54  Aligned_cols=75  Identities=20%  Similarity=0.310  Sum_probs=49.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhc--CCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~--~g~~d~v  227 (339)
                      .+.++||.|+ |.+|.+.++.+...|+ +|++++++++.    ++.+... ..|..+  .+.+.+.+.+..  .+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999987 8999999999999999 99999987652    2234221 123333  122333333221  2379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.79  E-value=0.043  Score=47.80  Aligned_cols=79  Identities=20%  Similarity=0.217  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCC--CEEEEEcCChhHHHHHHh-c-----CCc-eE--EeCCCCCCccHHHHHHHh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGKR-F-----GVT-EF--VNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~--~~Vi~~~~~~~~~~~~~~-~-----ga~-~v--i~~~~~~~~~~~~~l~~~  219 (339)
                      .++++||.|+ |++|.+.++.+...|+  .+|+.++++.++.+.+.+ +     +.. ..  .|..+  .+.+.+.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHH
Confidence            4678999987 8999998877666664  289999998877665532 1     322 12  23333  23444444443


Q ss_pred             cC--CCccEEEEcCC
Q 019535          220 TD--GGADYCFECVG  232 (339)
Q Consensus       220 ~~--g~~d~v~d~~g  232 (339)
                      ..  +++|++|+++|
T Consensus       110 ~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          110 PQEFKDIDILVNNAG  124 (287)
T ss_dssp             CGGGCSCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            32  37999999887

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.78  E-value=0.039  Score=49.08  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=34.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG  193 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~  193 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+.++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            3678899987 8999999999999999 899998 887765544

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.78  E-value=0.026  Score=47.35  Aligned_cols=101  Identities=15%  Similarity=0.259  Sum_probs=67.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc---eEEeCCCCCCccHHHHHHHhc
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT---EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~---~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      +.......++.+||-+|+|. |..+..+++. |..++++++.+++..+.+++....   .++..      +..+ + ...
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~------d~~~-~-~~~  104 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERA------DLDK-L-HLP  104 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEEC------CGGG-C-CCC
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEc------Chhh-c-cCC
Confidence            44556667889999999864 6677777765 655899999999999888775421   22221      1111 0 111


Q ss_pred             CCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          221 DGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+.+|+|+....      -...++.+.+.|+++ |+++...
T Consensus       105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            237999986432      134578889999997 9988754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.78  E-value=0.025  Score=48.91  Aligned_cols=95  Identities=15%  Similarity=0.084  Sum_probs=61.4

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|||.|+ |.+|...++.+...  |. +|+++++++++.+.+...+...+ .|..+      .+.+.+... ++|+||++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d------~~~l~~~~~-~~d~vi~~   73 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ------PESLQKAFA-GVSKLLFI   73 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC------HHHHHHHHh-cCCEEEEc
Confidence            5899987 99999999888777  88 89999988776655544454332 22222      233444433 58999998


Q ss_pred             CCCH-------HHHHHHHHHhhcC-CcEEEEeccC
Q 019535          231 VGLA-------SLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~-------~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      ++..       .....+++.+... -+++|.++..
T Consensus        74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            8741       2234455555543 1478887754

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.78  E-value=0.051  Score=42.75  Aligned_cols=100  Identities=19%  Similarity=0.204  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcC-CCccEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD-GGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~-g~~d~v  227 (339)
                      ++++.+||.+|+|. |..+..+++..|. .++++++.++ ..+.    ....++..+- ...+..+.+..... +.+|+|
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCCceeEE
Confidence            67889999999876 8888888888642 3999999876 3321    2122332222 11222223333233 489999


Q ss_pred             EE-----cCCC------------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          228 FE-----CVGL------------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       228 ~d-----~~g~------------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +.     ..+.            ...++.+.+.|+++ |.++.....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            96     2333            35578889999997 998876543

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.78  E-value=0.061  Score=48.04  Aligned_cols=132  Identities=14%  Similarity=0.120  Sum_probs=78.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc-CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEE
Q 019535          154 STVVIFGLGSIGLAVAEGARLC-GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE  229 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d  229 (339)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+. ++++|. .++       .++.    ++... .+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~-------~~~~----~~l~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV-------ASPD----EVFARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE-------SSHH----HHTTCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee-------CCHH----HHhcCCCCCEEEE
Confidence            3689999999998888777665 66 666 55666766554 455773 333       2232    33333 7999999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHHh-hcCCe-EEeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVL-HSGKI-LMGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~-~~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      |++.....+.+..++..  |+-|++..+..... -...+.... .++.. +.++.   ......+..+.+++.+|++
T Consensus        72 ~tp~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN---RRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG---GGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch---hhcCHHHHHHHHHHhcCCC
Confidence            99988878888888877  45566654321110 011111222 22332 33332   1223457788888888866

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.78  E-value=0.05  Score=48.87  Aligned_cols=133  Identities=17%  Similarity=0.166  Sum_probs=80.2

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc-CCCEEE-EEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          154 STVVIFGLGSIGLAVAEGARLC-GATRII-GVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|...   +     .++.+.+.   ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~-----~~~~~~l~---~~~~D~V~i~   73 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---D-----ATMEALLA---REDVEMVIIT   73 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---C-----SSHHHHHH---CSSCCEEEEC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---c-----CCHHHHhc---CCCCCEEEEe
Confidence            4799999999998877777666 67 655 456677665544 5567542   2     23433332   2379999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCe-EEeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKI-LMGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      ++.....+.+..++..  |+-|++..+...... ...+... ..+++. +.++.   ......++.+.+++.+|.+
T Consensus        74 tp~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~---~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           74 VPNDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS---SRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             SCTTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG---GGGSHHHHHHHHHHHTTTT
T ss_pred             CChHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec---hhcCHHHHHHHHHHhcCCC
Confidence            9988767788888877  566777543211100 1111122 223343 33432   2223457788888888866

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.77  E-value=0.09  Score=48.92  Aligned_cols=95  Identities=7%  Similarity=-0.005  Sum_probs=58.2

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +.+|+|+|+|.+|.+.++.+...|. +|+++++++++.+.+.+ ++....+..+-   .+. +.+.+... ++|+|++|+
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv---~d~-~~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT---TCH-HHHHHHHT-TSSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec---CCH-HHHHHHHc-CCcEEEECC
Confidence            4689999999999999988888898 89999998877665432 33222221111   122 22333222 699999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEe
Q 019535          232 GLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +..........++..+ -.++..
T Consensus        77 ~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHT-CEEEES
T ss_pred             ccccchHHHHHHHhCC-CeEEEe
Confidence            8643233445556664 444443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.77  E-value=0.16  Score=42.93  Aligned_cols=88  Identities=13%  Similarity=0.136  Sum_probs=58.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH--------------HHH-HHhcCCceEEeCCCCCCccHHHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK--------------FEI-GKRFGVTEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~--------------~~~-~~~~ga~~vi~~~~~~~~~~~~~l  216 (339)
                      .+.+|.|+|+|.+|.+.++.+...|. +|++.++++++              .+. ...++....        .+..+.+
T Consensus        18 ~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHL--------AAFADVA   88 (245)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEE--------EEHHHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceec--------cCHHHHH
Confidence            45789999999999999999999999 89999998876              333 233443322        2333333


Q ss_pred             HHhcCCCccEEEEcCCCHHHHHHH----HHHhhcCCcEEEEec
Q 019535          217 IDMTDGGADYCFECVGLASLVQEA----YACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~g~~~~~~~~----~~~l~~~~G~~v~~g  255 (339)
                      ..     .|+||-|+......+.+    ...+ ++ -.++.++
T Consensus        89 ~~-----aDvVilavp~~~~~~~~~~i~~~~l-~g-~ivi~~s  124 (245)
T 3dtt_A           89 AG-----AELVVNATEGASSIAALTAAGAENL-AG-KILVDIA  124 (245)
T ss_dssp             HH-----CSEEEECSCGGGHHHHHHHHCHHHH-TT-SEEEECC
T ss_pred             hc-----CCEEEEccCcHHHHHHHHHhhhhhc-CC-CEEEECC
Confidence            33     79999999876533332    2334 54 5666665

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.76  E-value=0.13  Score=46.38  Aligned_cols=91  Identities=16%  Similarity=0.188  Sum_probs=62.5

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+..   .     .++.+.+...  ..+|+||-|++
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~-----~s~~e~~~~a--~~~DvVi~~vp   90 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---A-----RSIEEFCAKL--VKPRVVWLMVP   90 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---C-----SSHHHHHHHS--CSSCEEEECSC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---e-----CCHHHHHhcC--CCCCEEEEeCC
Confidence            3579999999999999999999999 9999999999988887766431   1     2333433331  13589999888


Q ss_pred             CHHHHHHHHHH----hhcCCcEEEEecc
Q 019535          233 LASLVQEAYAC----CRKGWGKTIVLGV  256 (339)
Q Consensus       233 ~~~~~~~~~~~----l~~~~G~~v~~g~  256 (339)
                      ... ++..++.    +.++ ..++..+.
T Consensus        91 ~~~-v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           91 AAV-VDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             GGG-HHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             HHH-HHHHHHHHHhhCCCC-CEEEeCCC
Confidence            764 4444333    3443 45555543

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.76  E-value=0.013  Score=49.25  Aligned_cols=99  Identities=12%  Similarity=0.078  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC---ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga---~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      ..++.+||-+|+|. |..+..+++.... +|++++.+++..+.+++...   ..+ ....   .++.+.+..+..+.||+
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~---~d~~~~~~~~~~~~fD~  131 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKV-IPLK---GLWEDVAPTLPDGHFDG  131 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEE-EEEE---SCHHHHGGGSCTTCEEE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcCCCe-EEEe---cCHHHhhcccCCCceEE
Confidence            46788999999873 6777777554444 89999999998888866321   222 1111   34433222333348999


Q ss_pred             EEE-cCC----CH------HHHHHHHHHhhcCCcEEEEec
Q 019535          227 CFE-CVG----LA------SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~d-~~g----~~------~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+. +..    ..      ..++++.+.|+++ |+++.+.
T Consensus       132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  170 (236)
T 1zx0_A          132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EEECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEe
Confidence            986 322    11      2367889999998 9988774

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.03  Score=49.72  Aligned_cols=77  Identities=19%  Similarity=0.214  Sum_probs=48.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHh
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-----SEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-----~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~  219 (339)
                      ++++||.|+ |++|.++++.+...|+ +|++++++     +++.+.+    +..+.. ..  .|..+  .+.+.+.+.+.
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd--~~~v~~~~~~~   81 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS--QVSVDRAIDQI   81 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHH
Confidence            568899987 8999999999999999 89987765     3333333    223422 22  23333  12333333332


Q ss_pred             cC--CCccEEEEcCC
Q 019535          220 TD--GGADYCFECVG  232 (339)
Q Consensus       220 ~~--g~~d~v~d~~g  232 (339)
                      ..  +++|++++++|
T Consensus        82 ~~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHHSCCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            21  37999999988

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.74  E-value=0.019  Score=49.45  Aligned_cols=73  Identities=14%  Similarity=0.104  Sum_probs=47.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhc--CCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMT--DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~--~g~~d~  226 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++     .....  ...|..+  .++..+.+.+..  -|++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTT--KEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTS--HHHHHHHHHHHHHHTSSCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            5788999987 8999999999999999 99999986542     12211  1223333  122222222222  247999


Q ss_pred             EEEcCC
Q 019535          227 CFECVG  232 (339)
Q Consensus       227 v~d~~g  232 (339)
                      ++++.|
T Consensus        82 lVnnAG   87 (261)
T 4h15_A           82 IVHMLG   87 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.74  E-value=0.035  Score=48.28  Aligned_cols=80  Identities=20%  Similarity=0.081  Sum_probs=49.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHHH-----hcCCc-eEEeCCCCC----CccHHHHHHHh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGK-----RFGVT-EFVNSKNCG----DKSVSQIIIDM  219 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~-----~~ga~-~vi~~~~~~----~~~~~~~l~~~  219 (339)
                      .+.++||.|+ |++|.++++.+...|+ +|+.+++++ ++.+.+.     ..+.. .++..+-..    .+.+.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3678899987 8999999999888999 899999887 5544332     23432 222222101    12222222222


Q ss_pred             c--CCCccEEEEcCC
Q 019535          220 T--DGGADYCFECVG  232 (339)
Q Consensus       220 ~--~g~~d~v~d~~g  232 (339)
                      .  .+++|++|+++|
T Consensus       101 ~~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            1  137999999887

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.73  E-value=0.027  Score=49.07  Aligned_cols=98  Identities=12%  Similarity=0.152  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC-------c--eEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-------T--EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga-------~--~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++. ..       .  .++.      .+..+.+...
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~~  148 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI------EDASKFLENV  148 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE------SCHHHHHHHC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE------CChHHHHHhC
Confidence            34678999998763 66666777765445999999999988888763 21       1  2221      3444444332


Q ss_pred             cCCCccEEEE-cCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFE-CVG---------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d-~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       .+.||+|+- ...         ....++.+.+.|+++ |.++....
T Consensus       149 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~~  193 (283)
T 2i7c_A          149 -TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQCE  193 (283)
T ss_dssp             -CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             -CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEECC
Confidence             348999984 321         035588999999997 99987743

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.73  E-value=0.039  Score=45.61  Aligned_cols=101  Identities=18%  Similarity=0.172  Sum_probs=68.0

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHH-hcCC-C
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID-MTDG-G  223 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~-~~~g-~  223 (339)
                      ......++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++.+...+..      .++.+.... ...+ .
T Consensus        46 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~~~~~  116 (227)
T 3e8s_A           46 LAILGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHL------ASYAQLAEAKVPVGKD  116 (227)
T ss_dssp             HHHHHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEE------CCHHHHHTTCSCCCCC
T ss_pred             HHhhcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccch------hhHHhhcccccccCCC
Confidence            333445678999999864 6677777666 88 9999999999999988765333332      122221111 1233 5


Q ss_pred             ccEEEEcCC-----CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          224 ADYCFECVG-----LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~d~~g-----~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ||+|+....     -...++.+.+.|+++ |.++....
T Consensus       117 fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~~  153 (227)
T 3e8s_A          117 YDLICANFALLHQDIIELLSAMRTLLVPG-GALVIQTL  153 (227)
T ss_dssp             EEEEEEESCCCSSCCHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccEEEECchhhhhhHHHHHHHHHHHhCCC-eEEEEEec
Confidence            999986432     245588999999997 99888654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.72  E-value=0.024  Score=47.78  Aligned_cols=77  Identities=22%  Similarity=0.192  Sum_probs=48.6

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH----HhcCCc-eE-E--eCCCCCCccHHHHHHHhc--C
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EF-V--NSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~~ga~-~v-i--~~~~~~~~~~~~~l~~~~--~  221 (339)
                      +++||.|+ |.+|...++.+...|+ +|+++ .+++++.+.+    +..+.. .. +  |..+  .+.+.+.+.+..  -
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE--AEAATALVHQAAEVL   78 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC--HHHHHHHHHHHHHhc
Confidence            57899987 8999999999989999 88887 7777665443    223432 12 2  3332  122222222221  1


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.72  E-value=0.03  Score=48.07  Aligned_cols=74  Identities=19%  Similarity=0.220  Sum_probs=47.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d~v  227 (339)
                      .+.++||.|+ |.+|.++++.+...|+ +|+++++++++     ...+.. ..|..+  .+.+.+.+.+...  +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN--PDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999987 8999999999999999 89999887654     111211 223333  1222222322221  379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.71  E-value=0.029  Score=48.26  Aligned_cols=80  Identities=19%  Similarity=0.131  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~  221 (339)
                      ..+.++||.|+ |.+|.++++.+...|+ +|+.+ .+++++.+.+.    +.+.. .++  |..+  .+++.+.+.+...
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN--AADIAAMFSAVDR  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35678999987 8999999999999999 77666 66666554432    23432 222  3222  1222222322221


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++|+++|.
T Consensus       101 ~~g~id~li~nAg~  114 (272)
T 4e3z_A          101 QFGRLDGLVNNAGI  114 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hCCCCCEEEECCCC
Confidence              379999998873

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.70  E-value=0.032  Score=48.30  Aligned_cols=95  Identities=14%  Similarity=0.105  Sum_probs=64.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc------CC----ceEEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV----TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~------ga----~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.    ..++.      .+..+.+.. ..
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~------~D~~~~l~~-~~  146 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV------DDGFMHIAK-SE  146 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE------SCSHHHHHT-CC
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE------CcHHHHHhh-CC
Confidence            568999998763 66677777766666999999999988887652      11    12332      233333433 23


Q ss_pred             CCccEEEEcCCC----------HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.||+|+--...          ...++.+.+.|+++ |.++...
T Consensus       147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            489999843221          35588999999997 9988864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.70  E-value=0.034  Score=47.53  Aligned_cols=79  Identities=19%  Similarity=0.380  Sum_probs=49.3

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHHHh-cCCceEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-~ga~~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+   |.+|.+.++.+...|+ +|+.++++++   ..+.+.+ .+....+  |..+  .+.+.+.+.+... 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ--DEELDALFAGVKEA   83 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHHHHHH
Confidence            3678999975   6999999988888899 8999998775   2333322 3422333  3333  1222222222211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        84 ~g~iD~lv~~Ag~   96 (261)
T 2wyu_A           84 FGGLDYLVHAIAF   96 (261)
T ss_dssp             HSSEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.70  E-value=0.086  Score=47.74  Aligned_cols=135  Identities=16%  Similarity=0.095  Sum_probs=79.6

Q ss_pred             CEEEEEccCHHHHHHHHHHHH--------cCCCEEEEE-cCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARL--------CGATRIIGV-DVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~--------~G~~~Vi~~-~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      =+|.|+|+|.+|..-+...+.        -++ +++++ ++++++.+ +++++|...++       .++.+.+.+   ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~~---~~   94 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIAD---PE   94 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHHC---TT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhcC---CC
Confidence            479999999999765443322        256 66665 44555544 45678877665       234333322   37


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCe-EEeeecCCCCCCCcHHHHHHHHhC
Q 019535          224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKI-LMGSLFGGLKAKSDIPILLKRYMD  300 (339)
Q Consensus       224 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~l~~  300 (339)
                      +|+|+-|++...-.+.+..+|..  |+-|++.-+...... ...+... ..+++. +.++.   ......++.+.+++.+
T Consensus        95 iDaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~---~R~~p~~~~~k~~i~~  169 (393)
T 4fb5_A           95 VDVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGYN---YIQNPVMRHIRKLVGD  169 (393)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCG---GGGCHHHHHHHHHHHT
T ss_pred             CcEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCccccccc---cccChHHHHHHHHHHc
Confidence            99999999988878888888887  688888643221100 0111122 223333 33332   2223467888888988


Q ss_pred             CCCC
Q 019535          301 KELE  304 (339)
Q Consensus       301 g~l~  304 (339)
                      |++-
T Consensus       170 G~iG  173 (393)
T 4fb5_A          170 GVIG  173 (393)
T ss_dssp             TTTC
T ss_pred             CCCc
Confidence            8663

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.70  E-value=0.023  Score=48.44  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHHH-hcCC
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID-MTDG  222 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~~-~~~g  222 (339)
                      ..++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++    +|...  ++.      .+..+.... ...+
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~------~d~~~~~~~~~~~~  150 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALW------GRAEVLAREAGHRE  150 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE------CCHHHHTTSTTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEE------CcHHHhhcccccCC
Confidence            35688999998763 6666777777643399999999998888754    45432  232      232221111 1124


Q ss_pred             CccEEEEc-CCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFEC-VGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .||+|+.. +.. ...++.+.+.|+++ |+++.+-.
T Consensus       151 ~fD~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~g  185 (249)
T 3g89_A          151 AYARAVARAVAPLCVLSELLLPFLEVG-GAAVAMKG  185 (249)
T ss_dssp             CEEEEEEESSCCHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred             CceEEEECCcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            79999853 332 44577788899997 99887643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.70  E-value=0.043  Score=48.50  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=49.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhHHHH----HHhcCCce-E--EeCCCCCCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEI----GKRFGVTE-F--VNSKNCGDKS  211 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~----~~~~ga~~-v--i~~~~~~~~~  211 (339)
                      .++++||.|+ |++|.++++.+...|+ +|++++++            +++.+.    ++..+... .  .|..+  .+.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~  121 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD--LAS  121 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHH
Confidence            5678999987 8999999999999999 89988765            333332    23344332 2  23333  122


Q ss_pred             HHHHHHHhcC--CCccEEEEcCCC
Q 019535          212 VSQIIIDMTD--GGADYCFECVGL  233 (339)
Q Consensus       212 ~~~~l~~~~~--g~~d~v~d~~g~  233 (339)
                      +.+.+.+...  +++|++|+++|.
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333332221  379999998874

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.69  E-value=0.026  Score=46.35  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC----ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----TEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga----~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      +.++.+||.+|+|. |..+..+++. |..++++++.++...+.+++...    ..++..+-   .++     ....+.+|
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~~~fD  109 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPSASFD  109 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCSSCEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCCCccc
Confidence            46788999999875 7777777776 44489999999998888876421    22332222   111     12223799


Q ss_pred             EEEEcCC---------------------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          226 YCFECVG---------------------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       226 ~v~d~~g---------------------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|+....                     ....++.+.+.|+++ |+++....
T Consensus       110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            9996321                     134578889999997 99988754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.67  E-value=0.068  Score=43.40  Aligned_cols=97  Identities=15%  Similarity=0.127  Sum_probs=59.6

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      .+|||.|+ |.+|..+++.+...|. +|+++++++++.+.....+. .++..+-   .+ .+.+.+... ++|+||++++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~---~~-~~~~~~~~~-~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDV---LQ-AADVDKTVA-GQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCT---TS-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecC---CC-HHHHHHHHc-CCCEEEECcc
Confidence            57999987 9999999999988998 99999998765432211122 2332221   12 223333332 5899999987


Q ss_pred             CHH----------HHHHHHHHhhcC-CcEEEEeccC
Q 019535          233 LAS----------LVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       233 ~~~----------~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      ...          ....+++.+... .++++.++..
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            432          133444444331 1588877653

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.67  E-value=0.028  Score=47.74  Aligned_cols=97  Identities=16%  Similarity=0.206  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..   .++..+-   .++     ...
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~  111 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNL-----PFQ  111 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----SSC
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhC-----CCC
Confidence            3678889999999874 8888999999887 99999999988877654    3421   2222221   111     111


Q ss_pred             CCCccEEEEc-----CCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          221 DGGADYCFEC-----VGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g~~d~v~d~-----~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+.||+|+..     .+-...++.+.+.|+++ |+++...
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            2379999742     23345688999999997 9998875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.66  E-value=0.028  Score=48.27  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=50.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|+++++ ++++.+.+    ++.+.. .++  |..+  .+.+.+.+.+... 
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 8999888 65554433    333533 222  3332  1222232322211 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       +++|++|+++|.
T Consensus        97 ~~~~d~vi~~Ag~  109 (274)
T 1ja9_A           97 FGGLDFVMSNSGM  109 (274)
T ss_dssp             HSCEEEEECCCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.66  E-value=0.086  Score=49.07  Aligned_cols=102  Identities=15%  Similarity=0.229  Sum_probs=65.9

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++++++||-+|+|+ |..++++|..++ ..+|++++.++++.+.+++    +|...+....    .+..+ +.....
T Consensus       100 ~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~----~Da~~-l~~~~~  173 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN----HAPAE-LVPHFS  173 (456)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC----CCHHH-HHHHHT
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe----CCHHH-hhhhcc
Confidence            45678899999998754 555566666543 2389999999998877743    6755332222    23322 222223


Q ss_pred             CCccEEE-E--cCCCH-------------------------HHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.||.|+ |  |+|..                         ..++.+++.|+++ |+++...
T Consensus       174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsT  234 (456)
T 3m4x_A          174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYST  234 (456)
T ss_dssp             TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            4799998 4  54432                         4477888999997 9887643

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.64  E-value=0.055  Score=44.74  Aligned_cols=100  Identities=14%  Similarity=0.147  Sum_probs=62.4

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~----~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      ..++++++||-+|+|+ |..+..+++..+..+|++++.+++..+    .+++......+..+.   ..... ... ..+.
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~---~~~~~-~~~-~~~~  126 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPWK-YSG-IVEK  126 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGGG-TTT-TCCC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCC---CCchh-hcc-cccc
Confidence            4577899999999874 778888888775338999999987543    333332112222111   11100 001 1237


Q ss_pred             ccEEEEcCCCHH----HHHHHHHHhhcCCcEEEEe
Q 019535          224 ADYCFECVGLAS----LVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       224 ~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~  254 (339)
                      +|+|+.....+.    .++++.+.|+++ |+++..
T Consensus       127 fD~V~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~i~  160 (210)
T 1nt2_A          127 VDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  160 (210)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEEEeccChhHHHHHHHHHHHHhCCC-CEEEEE
Confidence            999986554322    257888999998 999887

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.64  E-value=0.031  Score=48.94  Aligned_cols=96  Identities=16%  Similarity=0.147  Sum_probs=63.0

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--------C--ceEEeCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--------V--TEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--------a--~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        .  ..++.      .+..+.+.. .
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE------CcHHHHHhh-C
Confidence            3568999998764 666777777666559999999998888776521        1  12222      233333322 2


Q ss_pred             CCCccEEE-EcCCC----------HHHHHHHHHHhhcCCcEEEEec
Q 019535          221 DGGADYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g~~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+.||+|+ |....          ...++.+.+.|+++ |.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            34799998 43211          34578999999997 9988864

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=95.64  E-value=0.13  Score=42.69  Aligned_cols=98  Identities=12%  Similarity=0.124  Sum_probs=66.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-CCCccE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-DGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-~g~~d~  226 (339)
                      .+.+||-+|+|. |..++.+|+...-.+|++++.+++..+.+++    .|...+ ....   .+..+.+.... .+.+|.
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv-~~~~---~Da~~~l~~~~~~~~~d~  108 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNL-RVMC---HDAVEVLHKMIPDNSLRM  108 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSE-EEEC---SCHHHHHHHHSCTTCEEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcE-EEEE---CCHHHHHHHHcCCCChhe
Confidence            567899999874 7888888887743389999999988777643    444332 1112   34444444433 348999


Q ss_pred             EEEcCCCH--------------HHHHHHHHHhhcCCcEEEEec
Q 019535          227 CFECVGLA--------------SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       227 v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      |+-....+              ..++.+.+.|+++ |.+++..
T Consensus       109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG-G~l~i~t  150 (218)
T 3dxy_A          109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG-GVFHMAT  150 (218)
T ss_dssp             EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC-cEEEEEe
Confidence            88553221              3588999999997 9887764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.64  E-value=0.026  Score=48.70  Aligned_cols=95  Identities=12%  Similarity=0.084  Sum_probs=59.5

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|||.|+ |.+|...++.+...  |+ +|+++++++++.+.+...+...+ .|..+      .+.+.+... ++|+||++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~~-~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD------EAALTSALQ-GVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC------HHHHHHHHh-CCCEEEEe
Confidence            4899987 99999999888877  88 89999988776555544454332 22222      233444433 58999998


Q ss_pred             CCCH-----HHHHHHHHHhhcC-CcEEEEeccC
Q 019535          231 VGLA-----SLVQEAYACCRKG-WGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~-----~~~~~~~~~l~~~-~G~~v~~g~~  257 (339)
                      ++..     .....+++.+... -+++|.++..
T Consensus        73 a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           73 SSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             C--------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            8742     1234455554432 1578887754

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.63  E-value=0.0062  Score=52.90  Aligned_cols=93  Identities=6%  Similarity=-0.034  Sum_probs=57.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+++|+|+|++|.+++..+...|+++|+++.+++++.+.+... . ...        .+ +.+.+.. ..+|+||+|+
T Consensus       116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~-~~~--------~~-~~~~~~~-~~aDiVInaT  183 (277)
T 3don_A          116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-I-NKI--------NL-SHAESHL-DEFDIIINTT  183 (277)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-C-EEE--------CH-HHHHHTG-GGCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-c-ccc--------cH-hhHHHHh-cCCCEEEECc
Confidence            578899999999999999999999997899999988765443221 0 111        12 1222221 2589999998


Q ss_pred             CCHHH--HH--HHHHHhhcCCcEEEEeccC
Q 019535          232 GLASL--VQ--EAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       232 g~~~~--~~--~~~~~l~~~~G~~v~~g~~  257 (339)
                      +....  ..  .....++++ ..++++...
T Consensus       184 p~Gm~~~~~~~l~~~~l~~~-~~V~D~vY~  212 (277)
T 3don_A          184 PAGMNGNTDSVISLNRLASH-TLVSDIVYN  212 (277)
T ss_dssp             C-------CCSSCCTTCCSS-CEEEESCCS
T ss_pred             cCCCCCCCcCCCCHHHcCCC-CEEEEecCC
Confidence            75321  10  013445665 666676543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.63  E-value=0.03  Score=48.34  Aligned_cols=91  Identities=15%  Similarity=0.130  Sum_probs=62.6

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|||+|+|.+|...++.+...|. +|+++++++.+.+.+...+...+. .+-   .++.       ..++|+||++++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~---~d~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPG---EEPS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSS---SCCC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-ecc---cccc-------cCCCCEEEECCCc
Confidence            579999999999999999988899 999999999888777666654332 221   1211       2379999998864


Q ss_pred             H----HHHHHHHHHhhc--C-CcEEEEecc
Q 019535          234 A----SLVQEAYACCRK--G-WGKTIVLGV  256 (339)
Q Consensus       234 ~----~~~~~~~~~l~~--~-~G~~v~~g~  256 (339)
                      .    ...+..++.+..  . -.++|.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    223445555543  1 157887764

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.63  E-value=0.042  Score=50.53  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +.....+.++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.+.......-.   .+..+.+. ...+.
T Consensus        99 l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~---~~~~~~l~-~~~~~  171 (416)
T 4e2x_A           99 FLATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE---KATADDVR-RTEGP  171 (416)
T ss_dssp             HHHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS---HHHHHHHH-HHHCC
T ss_pred             HHHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec---hhhHhhcc-cCCCC
Confidence            44555677889999999864 666666665 488 9999999999999998877554432222   22222222 22347


Q ss_pred             ccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEe
Q 019535          224 ADYCFECVG------LASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       224 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ||+|+....      -...++.+.+.|+++ |.++..
T Consensus       172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          172 ANVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            999985332      234588999999997 998875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.62  E-value=0.019  Score=49.09  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=48.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~v  227 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.     +. ...|..+  .+.+.+.+.+..  -+++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d--~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD--TEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS--HHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999987 8999999999999999 89999987654321     11 1123333  122222232221  2378999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |+++|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.61  E-value=0.09  Score=49.77  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-------HHHHHhcCCce-EE--eCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVTE-FV--NSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~~ga~~-vi--~~~~~~~~~~~~~l~~  218 (339)
                      ++++.++||.|+ |.+|...++.+...|+++|+.+.++...       .+.++..|... ++  |..+   .+-.+.+.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd---~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE---RDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC---HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC---HHHHHHHHh
Confidence            457889999986 9999999998888898678888887531       22334456432 22  3232   222222222


Q ss_pred             hcCCCccEEEEcCCC
Q 019535          219 MTDGGADYCFECVGL  233 (339)
Q Consensus       219 ~~~g~~d~v~d~~g~  233 (339)
                      .  +.+|+||++.|.
T Consensus       333 ~--~~ld~VVh~AGv  345 (511)
T 2z5l_A          333 A--YPPNAVFHTAGI  345 (511)
T ss_dssp             H--SCCSEEEECCCC
T ss_pred             c--CCCcEEEECCcc
Confidence            1  479999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.61  E-value=0.031  Score=47.16  Aligned_cols=38  Identities=18%  Similarity=0.380  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      ..+.++||.|+ |.+|.+.++.+...|+ +|+++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~   43 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENE   43 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhh
Confidence            35678999987 8999999999999999 89999987654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.61  E-value=0.038  Score=47.94  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=49.0

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHHHh-cCCceEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-~ga~~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+   |.+|.++++.+...|+ +|++++++++   ..+.+.+ .+....+  |..+  .+.+.+.+.+..  
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   96 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL--DEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999975   6999999999888999 8999998775   2233322 3422222  3333  122222222221  


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      -+++|++|+++|
T Consensus        97 ~g~iD~lv~~Ag  108 (285)
T 2p91_A           97 WGSLDIIVHSIA  108 (285)
T ss_dssp             TSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            247999999887

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.61  E-value=0.045  Score=45.62  Aligned_cols=99  Identities=19%  Similarity=0.314  Sum_probs=66.2

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ..++++.+||-+|+|..|..++.+++..+. +|++++.+++..+.+++    .+. ..++..+-   ..+    ..+..+
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~~~  122 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVVEG  122 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTCCS
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhcccC
Confidence            346789999999988558888888887666 99999999998877754    342 23333221   001    112224


Q ss_pred             CccEEEEcCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          223 GADYCFECVGL-------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       223 ~~d~v~d~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .||+|+-...-                         ...++.+.+.|+++ |+++.+-
T Consensus       123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  179 (230)
T 3evz_A          123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALYL  179 (230)
T ss_dssp             CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEEe
Confidence            79999843110                         34477888889997 9988763

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.56  E-value=0.036  Score=45.21  Aligned_cols=62  Identities=24%  Similarity=0.336  Sum_probs=43.1

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      ++||.|+ |.+|...++.+. .|+ +|++++++++          ....|..+  .+.+.+.+...  +++|++|+++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--CCCCEEEECCC
Confidence            6999987 999999998888 899 8999988754          12234333  12233333333  46899999887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.54  E-value=0.036  Score=47.46  Aligned_cols=81  Identities=17%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEc-c--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceE--EeCCCCCCccHHHHHHHhc
Q 019535          150 VEVGSTVVIFG-L--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       150 ~~~~~~VLI~G-~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      ...++++||.| +  |++|.+.++.+...|+ +|+.++++.+..+.++    +.+...+  .|..+  .+.+.+.+.+..
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   87 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD--DAQIDALFASLK   87 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC--HHHHHHHHHHHH
Confidence            34678999997 4  6999999999999999 9999988765444443    2343223  33333  122333333222


Q ss_pred             --CCCccEEEEcCCC
Q 019535          221 --DGGADYCFECVGL  233 (339)
Q Consensus       221 --~g~~d~v~d~~g~  233 (339)
                        .+++|++|+++|.
T Consensus        88 ~~~g~id~lv~nAg~  102 (271)
T 3ek2_A           88 THWDSLDGLVHSIGF  102 (271)
T ss_dssp             HHCSCEEEEEECCCC
T ss_pred             HHcCCCCEEEECCcc
Confidence              2379999998873

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.53  E-value=0.038  Score=48.90  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-----CC-ceEE---eCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----GV-TEFV---NSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-----ga-~~vi---~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.+|||.|+ |.+|..+++.+...|+ +|+++++++++.+.+...     +. ..++   |..+   .+   .+.+..
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~---~~~~~~   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK---QG---AYDEVI   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS---TT---TTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC---hH---HHHHHH
Confidence            35678999987 9999999998888899 999999987765544321     21 1222   2222   11   122222


Q ss_pred             CCCccEEEEcCCCH--------------HHHHHHHHHhhc--CCcEEEEecc
Q 019535          221 DGGADYCFECVGLA--------------SLVQEAYACCRK--GWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~d~~g~~--------------~~~~~~~~~l~~--~~G~~v~~g~  256 (339)
                      . ++|+||++++..              .....+++.+.+  +.+++|.++.
T Consensus        82 ~-~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS  132 (342)
T 1y1p_A           82 K-GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS  132 (342)
T ss_dssp             T-TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred             c-CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence            2 689999988642              112344454442  1268888765

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.51  E-value=0.037  Score=47.23  Aligned_cols=78  Identities=12%  Similarity=0.144  Sum_probs=49.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHH---cCCCEEEEEcCChhHHHHHH-hc-----CCc-eE--EeCCCCCCccHHHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARL---CGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSVSQIIID  218 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~-~~-----ga~-~v--i~~~~~~~~~~~~~l~~  218 (339)
                      .+.++||.|+ |++|.+.++.+..   .|+ +|+.+++++++.+.+. ++     +.. ..  .|..+  .+.+.+.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~   81 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSA   81 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHH
Confidence            3567888887 8999999888777   899 9999999887665442 22     322 22  23333  1223333333


Q ss_pred             hcC----CCcc--EEEEcCC
Q 019535          219 MTD----GGAD--YCFECVG  232 (339)
Q Consensus       219 ~~~----g~~d--~v~d~~g  232 (339)
                      ...    +++|  ++++++|
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCC
T ss_pred             HHhccccccCCccEEEECCc
Confidence            322    3678  9999876

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.50  E-value=0.082  Score=44.77  Aligned_cols=39  Identities=26%  Similarity=0.219  Sum_probs=30.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFE  191 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~  191 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+ .++.++.+
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~   46 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE   46 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence            4678999987 8999999999999999 78775 55554443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.50  E-value=0.028  Score=49.77  Aligned_cols=80  Identities=10%  Similarity=0.072  Sum_probs=47.8

Q ss_pred             CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcC---CceEEeCCCCCCccHHHHHHHhcCC
Q 019535          149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFG---VTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~g---a~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .-+++.+|||+|+ |.+|..+++.+...|. +|+++++++.+  .+.++.+.   ...++..+-   .+ .+.+.+...+
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~   84 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM---AD-ACSVQRAVIK   84 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCT---TC-HHHHHHHHHH
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCC---CC-HHHHHHHHHH
Confidence            3567889999987 9999999998888999 99999987643  12222221   112222211   11 2233333334


Q ss_pred             -CccEEEEcCCC
Q 019535          223 -GADYCFECVGL  233 (339)
Q Consensus       223 -~~d~v~d~~g~  233 (339)
                       ++|+||++++.
T Consensus        85 ~~~d~Vih~A~~   96 (335)
T 1rpn_A           85 AQPQEVYNLAAQ   96 (335)
T ss_dssp             HCCSEEEECCSC
T ss_pred             cCCCEEEECccc
Confidence             68999999874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.50  E-value=0.038  Score=46.53  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEE-EcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~  221 (339)
                      +.++||.|+ |.+|...++.+...|+ +|++ ..+++++.+.+    ++.+.. ..  .|..+  .+.+.+.+.+..  -
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            467899987 9999999999999999 8888 47776665443    223432 12  23332  122223232221  2


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      +++|++|+++|.
T Consensus        78 g~id~li~~Ag~   89 (244)
T 1edo_A           78 GTIDVVVNNAGI   89 (244)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.50  E-value=0.063  Score=46.70  Aligned_cols=74  Identities=16%  Similarity=0.243  Sum_probs=51.1

Q ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc----CCc-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          152 VGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       152 ~~~~VLI~G-~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~----ga~-~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      .+.++||+| +|++|++++..+...|+ +|+.+.+++++.+.+. ++    +.. ...|..+   .   +.+.+... .+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~-~~  189 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---D---ASRAEAVK-GA  189 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---H---HHHHHHTT-TC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---H---HHHHHHHH-hC
Confidence            578999998 59999999999999999 7999999877665442 22    322 2334433   2   22333322 48


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999963

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.49  E-value=0.039  Score=48.89  Aligned_cols=76  Identities=21%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH--HHHHhcCC---ceEEeCCCCCCccHHHHHHHhcCC-Ccc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF--EIGKRFGV---TEFVNSKNCGDKSVSQIIIDMTDG-GAD  225 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~--~~~~~~ga---~~vi~~~~~~~~~~~~~l~~~~~g-~~d  225 (339)
                      +.+|||.|+ |.+|...++.+...|+ +|+++++++++.  +.++.++.   ..++. -+.  .+ .+.+.+...+ ++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~Dl--~d-~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIH-MDL--LE-FSNIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECC-CCT--TC-HHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEE-CCC--CC-HHHHHHHHHhcCCC
Confidence            568999987 9999999988888899 999999876542  23343321   11221 111  11 1233333333 689


Q ss_pred             EEEEcCCC
Q 019535          226 YCFECVGL  233 (339)
Q Consensus       226 ~v~d~~g~  233 (339)
                      +||++++.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.49  E-value=0.068  Score=47.48  Aligned_cols=135  Identities=14%  Similarity=0.043  Sum_probs=79.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc-CCCEEEE-EcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          154 STVVIFGLGSIGLAVAEGARLC-GATRIIG-VDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~-~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -+|.|+|+|.+|...+..++.. ++ ++++ .++++++.+. ++++|...++       .++.+.+.   ...+|+|+.|
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~   74 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCK---DETIDIIYIP   74 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHH---CTTCSEEEEC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhc---CCCCCEEEEc
Confidence            3789999999998877777665 66 6664 4566666544 4557754322       23433332   1269999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      ++.....+.+..++..  |+-|++..+.....- ...+... ..+++.+ .++.   ......++.+.+++.+|.+-
T Consensus        75 tp~~~h~~~~~~al~~--gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           75 TYNQGHYSAAKLALSQ--GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQK---SVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CCGGGHHHHHHHHHHT--TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCS---GGGCHHHHHHHHHHHTTTTC
T ss_pred             CCCHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEh---hhhCHHHHHHHHHHhCCCCC
Confidence            9988878888888877  465666543211100 1111122 2234433 3332   11234577888888888663

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.48  E-value=0.045  Score=46.11  Aligned_cols=79  Identities=15%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCC------EEEEEcCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHH
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGAT------RIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIID  218 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~------~Vi~~~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~  218 (339)
                      +.++||.|+ |.+|...++.+...|+.      +|+.+++++++.+.+.+    .+.. .++  |..+  .+.+.+.+.+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC--HHHHHHHHHH
Confidence            457899987 89999999888888874      78889988776655432    2422 222  3222  1222222222


Q ss_pred             hc--CCCccEEEEcCCC
Q 019535          219 MT--DGGADYCFECVGL  233 (339)
Q Consensus       219 ~~--~g~~d~v~d~~g~  233 (339)
                      ..  .+++|++|+++|.
T Consensus        80 ~~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHHTSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence            21  2379999998873

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=95.46  E-value=0.13  Score=41.44  Aligned_cols=97  Identities=18%  Similarity=0.200  Sum_probs=61.0

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      .++.+||-+|+|. |..++.+++ .+..+|++++.+++..+.+++    .+..  .++.      .+..+.......+.+
T Consensus        43 ~~~~~vLDlgcG~-G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~------~d~~~~~~~~~~~~f  114 (189)
T 3p9n_A           43 LTGLAVLDLYAGS-GALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRR------GAVAAVVAAGTTSPV  114 (189)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE------SCHHHHHHHCCSSCC
T ss_pred             CCCCEEEEeCCCc-CHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE------ccHHHHHhhccCCCc
Confidence            5788999998753 455554554 466589999999988887754    3432  2332      344444433334489


Q ss_pred             cEEEEcC--CC-----HHHHHHHHH--HhhcCCcEEEEecc
Q 019535          225 DYCFECV--GL-----ASLVQEAYA--CCRKGWGKTIVLGV  256 (339)
Q Consensus       225 d~v~d~~--g~-----~~~~~~~~~--~l~~~~G~~v~~g~  256 (339)
                      |+|+-..  ..     ...++.+.+  .|+++ |.++..-.
T Consensus       115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pg-G~l~~~~~  154 (189)
T 3p9n_A          115 DLVLADPPYNVDSADVDAILAALGTNGWTREG-TVAVVERA  154 (189)
T ss_dssp             SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTT-CEEEEEEE
T ss_pred             cEEEECCCCCcchhhHHHHHHHHHhcCccCCC-eEEEEEec
Confidence            9998532  11     233556666  78897 98877643

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.46  E-value=0.039  Score=47.10  Aligned_cols=94  Identities=13%  Similarity=0.027  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC--------------------c--eEEeCCC
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--------------------T--EFVNSKN  206 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga--------------------~--~vi~~~~  206 (339)
                      ..++.+||.+|+|. |..+..+++. |+ +|++++.++...+.+++ .+.                    .  .++..+-
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~  142 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI  142 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence            45788999999874 7777777765 99 99999999999888854 321                    1  1121111


Q ss_pred             CCCccHHHHHHHhcC-CCccEEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEec
Q 019535          207 CGDKSVSQIIIDMTD-GGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~-g~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                         .++     .... +.||+|++...     .   ...++.+.+.|+++ |+++++.
T Consensus       143 ---~~l-----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          143 ---FDL-----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             ---TTG-----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ---ccC-----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence               111     1112 47999997432     1   23477888999998 9986554

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.45  E-value=0.027  Score=47.80  Aligned_cols=100  Identities=15%  Similarity=0.039  Sum_probs=68.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcC-CceEEeCCCCCCccHHHHHHHhcC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +.......++.+||-+|+| .|..+..+++.. +. ++++++.+++..+.+++.. ...++..+-   .++     . ..
T Consensus        25 l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~-~~   93 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL---ATW-----K-PA   93 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT---TTC-----C-CS
T ss_pred             HHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh---hhc-----C-cc
Confidence            4555667788999999987 477777888776 55 8999999999988887642 222332222   111     0 12


Q ss_pred             CCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCFECVG------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.+|+|+....      -...++.+.+.|+++ |+++...
T Consensus        94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            37999986432      234477888999997 9988764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.45  E-value=0.17  Score=44.54  Aligned_cols=88  Identities=20%  Similarity=0.232  Sum_probs=58.0

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC--hhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVI--SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~--~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+|.|+|.|.+|...++.+...|..+|++.+++  +++.+.+++.|...   .     .+..+.+..     .|+||-|+
T Consensus        25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~---~-----~~~~e~~~~-----aDvVi~~v   91 (312)
T 3qsg_A           25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC---K-----ASVAEVAGE-----CDVIFSLV   91 (312)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE---C-----SCHHHHHHH-----CSEEEECS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE---e-----CCHHHHHhc-----CCEEEEec
Confidence            479999999999999988888887689999986  57777777777531   1     223333332     68888888


Q ss_pred             CCHHHHHH---HHHHhhcCCcEEEEec
Q 019535          232 GLASLVQE---AYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~~~~~---~~~~l~~~~G~~v~~g  255 (339)
                      +.....+.   ....+.++ ..++..+
T Consensus        92 p~~~~~~~~~~l~~~l~~~-~ivvd~s  117 (312)
T 3qsg_A           92 TAQAALEVAQQAGPHLCEG-ALYADFT  117 (312)
T ss_dssp             CTTTHHHHHHHHGGGCCTT-CEEEECC
T ss_pred             CchhHHHHHHhhHhhcCCC-CEEEEcC
Confidence            77653332   22333443 4445443

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.45  E-value=0.056  Score=48.18  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=37.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  197 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g  197 (339)
                      .+.+|.|+|.|.+|...++.++..|. +|++.++++++ +..+++|
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g  188 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK  188 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence            46799999999999999999999999 99999988776 4444444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.44  E-value=0.062  Score=45.86  Aligned_cols=77  Identities=16%  Similarity=0.186  Sum_probs=47.9

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      ++++||.|+ |.+|.+.++.+...|+ +|+.+.++. +..+.+++    .+.. .+  .|..+  .+.+.+.+.+...  
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK--KEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            578999987 8999999999999999 888886554 33343332    2221 22  23333  1223333333221  


Q ss_pred             CCccEEEEcCC
Q 019535          222 GGADYCFECVG  232 (339)
Q Consensus       222 g~~d~v~d~~g  232 (339)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            37999999988

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.44  E-value=0.047  Score=47.07  Aligned_cols=78  Identities=14%  Similarity=0.192  Sum_probs=49.5

Q ss_pred             CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHHHh-cCCceE--EeCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGKR-FGVTEF--VNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-~ga~~v--i~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+   |.+|.++++.+...|+ +|+.++++++   ..+.+++ .+...+  .|..+  .+.+.+.+.+..  
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3678999974   6999999999999999 8999998865   3333322 342222  23333  122222232221  


Q ss_pred             CCCccEEEEcCC
Q 019535          221 DGGADYCFECVG  232 (339)
Q Consensus       221 ~g~~d~v~d~~g  232 (339)
                      -+++|++|+++|
T Consensus        82 ~g~id~lv~nAg   93 (275)
T 2pd4_A           82 LGSLDFIVHSVA   93 (275)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            237999999887

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.43  E-value=0.067  Score=44.43  Aligned_cols=96  Identities=20%  Similarity=0.340  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC-------ceEEeCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV-------TEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga-------~~vi~~~~~~~~~~~~~l~~  218 (339)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    +.       ..++..+.   ..+     .
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~-----~   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA---SSL-----S   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT---TSC-----C
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc---ccc-----C
Confidence            45788999999874 7777777776 88 999999999988888763    22       12222221   111     1


Q ss_pred             hcCCCccEEEEcC-----CCH----HHHHHHHHHhhcCCcEEEEeccC
Q 019535          219 MTDGGADYCFECV-----GLA----SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       219 ~~~g~~d~v~d~~-----g~~----~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ...+.+|+|+-..     ...    ..++.+.+.|+++ |+++.....
T Consensus        97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  143 (235)
T 3sm3_A           97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEFG  143 (235)
T ss_dssp             SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEEB
T ss_pred             CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEECC
Confidence            1123799998532     222    4588999999998 999887654

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.42  E-value=0.021  Score=47.75  Aligned_cols=96  Identities=13%  Similarity=0.090  Sum_probs=67.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhc-CCCccEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMT-DGGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~-~g~~d~v  227 (339)
                      +.++.+||-+|+|. |..+..+++. |. +|++++.++...+.+++... ..++..+-.  ..+     ... .+.||+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~-----~~~~~~~fD~v  115 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK--GEL-----PAGLGAPFGLI  115 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC--SSC-----CTTCCCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh--hcc-----CCcCCCCEEEE
Confidence            36788999999874 7777777776 77 99999999999988876532 233322210  000     112 2379999


Q ss_pred             EEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          228 FECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +....-...++.+.+.|+++ |+++..+.
T Consensus       116 ~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          116 VSRRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             EEESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             EeCCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            97766566688999999998 99995543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.42  E-value=0.016  Score=49.78  Aligned_cols=75  Identities=17%  Similarity=0.210  Sum_probs=48.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE--eCCCCCCccHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi--~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      .++++||.|+ |.+|.+.++.+...|+ +|+.++++.++.+..   .+ ..+  |..+  .+.+.+.+.+...  +++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISK--PETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTS--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCC--HHHHHHHHHHHHHHCCCCCE
Confidence            4678999987 8999999999999999 999999876543211   11 222  3332  1222222332211  37999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +++++|.
T Consensus       100 lv~nAg~  106 (260)
T 3un1_A          100 LVNNAGV  106 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998874

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.41  E-value=0.083  Score=46.22  Aligned_cols=92  Identities=15%  Similarity=0.147  Sum_probs=59.0

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      .+|||+|+ |.+|...++.+...|. +|+++++++.+.+ ++  +.. ++..+    -. .+.+.+... ++|+||++++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D----l~-~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD----YT-LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC----CC-HHHHHHHTT-TCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc----cc-HHHHHHhhc-CCCEEEEccc
Confidence            58999987 9999999999999999 9999999855554 33  332 33222    23 555655544 7999999887


Q ss_pred             CH-------------HHHHHHHHHhhcC-CcEEEEecc
Q 019535          233 LA-------------SLVQEAYACCRKG-WGKTIVLGV  256 (339)
Q Consensus       233 ~~-------------~~~~~~~~~l~~~-~G~~v~~g~  256 (339)
                      ..             .....+++.+... -.++|.++.
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            42             1134445555442 146877764

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.40  E-value=0.094  Score=43.19  Aligned_cols=99  Identities=16%  Similarity=0.129  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +.......++.+||-+|+|. |..+..+++. +. ++++++.+++..+.+++.-.  ..++..+-   .++     ... 
T Consensus        37 ~l~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~~~-----~~~-  104 (220)
T 3hnr_A           37 ILEDVVNKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDF---LSF-----EVP-  104 (220)
T ss_dssp             HHHHHHHTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCS---SSC-----CCC-
T ss_pred             HHHHhhccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCCh---hhc-----CCC-
Confidence            34444456788999999864 6777777766 77 99999999998888876422  22332221   111     011 


Q ss_pred             CCccEEEEcCC-----CHH---HHHHHHHHhhcCCcEEEEec
Q 019535          222 GGADYCFECVG-----LAS---LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g~~d~v~d~~g-----~~~---~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.+|+|+....     ...   .++.+.+.|+++ |.++...
T Consensus       105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  145 (220)
T 3hnr_A          105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG-GKIVFAD  145 (220)
T ss_dssp             SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            47999986432     221   588999999998 9988874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.39  E-value=0.098  Score=46.71  Aligned_cols=77  Identities=21%  Similarity=0.200  Sum_probs=51.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh-cC--CceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR-FG--VTEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~-~g--a~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+.+|||.|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +.  ...++..+-   .+ .+.+.+... ++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl---~d-~~~l~~~~~-~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV---RD-LERLNYALE-GVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCT---TC-HHHHHHHTT-TCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCC---CC-HHHHHHHHh-cCCE
Confidence            4678999987 99999999888777 86689999998877655533 32  112222111   11 233444433 6999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      ||++++.
T Consensus        95 Vih~Aa~  101 (344)
T 2gn4_A           95 CIHAAAL  101 (344)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.39  E-value=0.1  Score=47.87  Aligned_cols=134  Identities=13%  Similarity=0.067  Sum_probs=81.3

Q ss_pred             CEEEEEccCHHHHHHHHHHHHc---------CCCEEEEE-cCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLC---------GATRIIGV-DVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~---------G~~~Vi~~-~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      =+|.|+|+|.+|..-+...+..         ++ +++++ ++++++.+. ++++|...++       .++.+.+.+   .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~-elvav~d~~~~~a~~~a~~~~~~~~y-------~d~~~ll~~---~   95 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRP-HLYALADQDQAMAERHAAKLGAEKAY-------GDWRELVND---P   95 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEE-EEEEEECSSHHHHHHHHHHHTCSEEE-------SSHHHHHHC---T
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCe-EEEEEEcCCHHHHHHHHHHcCCCeEE-------CCHHHHhcC---C
Confidence            4789999999998766555443         45 56655 455665544 4678877665       234333322   3


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcC-CeEEeeecCCCCCCCcHHHHHHHHh
Q 019535          223 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSG-KILMGSLFGGLKAKSDIPILLKRYM  299 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~-~~i~~~~~~~~~~~~~~~~~~~~l~  299 (339)
                      .+|+|+-|++...-.+.+..+|..  |+-|++.-+.....- ...+... ..++ ..+.++..   .....++.+.+++.
T Consensus        96 ~vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~---R~~p~~~~~k~~i~  170 (412)
T 4gqa_A           96 QVDVVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNN---IKTPAALLAKQIIA  170 (412)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGG---GTSHHHHHHHHHHH
T ss_pred             CCCEEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccce---ecCHHHHHHHHHHh
Confidence            799999999988778888888887  578888654321100 0111112 1233 33444432   22345777888888


Q ss_pred             CCCC
Q 019535          300 DKEL  303 (339)
Q Consensus       300 ~g~l  303 (339)
                      +|.|
T Consensus       171 ~G~i  174 (412)
T 4gqa_A          171 RGDI  174 (412)
T ss_dssp             HTTT
T ss_pred             cCCc
Confidence            8766

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.39  E-value=0.024  Score=49.43  Aligned_cols=85  Identities=22%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+.     . .   ..    .++.+.+.+     .|+|+-+.
T Consensus       121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-----~-~---~~----~~l~ell~~-----aDiV~l~~  181 (290)
T 3gvx_A          121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNV-----D-V---IS----ESPADLFRQ-----SDFVLIAI  181 (290)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTC-----S-E---EC----SSHHHHHHH-----CSEEEECC
T ss_pred             ecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccc-----c-c---cc----CChHHHhhc-----cCeEEEEe
Confidence            47899999999999999999999999 99999987654321     1 1   11    233333333     57777766


Q ss_pred             CC-HHH----HHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-ASL----VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~~----~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +. +.+    -...+..|+++ ..+|.++.
T Consensus       182 P~t~~t~~li~~~~l~~mk~g-ailIN~aR  210 (290)
T 3gvx_A          182 PLTDKTRGMVNSRLLANARKN-LTIVNVAR  210 (290)
T ss_dssp             CCCTTTTTCBSHHHHTTCCTT-CEEEECSC
T ss_pred             eccccchhhhhHHHHhhhhcC-ceEEEeeh
Confidence            63 111    13556667775 66766653

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.39  E-value=0.031  Score=47.78  Aligned_cols=101  Identities=17%  Similarity=0.207  Sum_probs=65.8

Q ss_pred             HhcCCC-CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHH
Q 019535          146 RTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       146 ~~~~~~-~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~  217 (339)
                      ....++ ++.+||-+|+|. |..++.+++.... +|++++.+++..+.+++    .+..   .++..      ++.+...
T Consensus        42 ~~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~------D~~~~~~  113 (259)
T 3lpm_A           42 KFSYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY------DLKKITD  113 (259)
T ss_dssp             HHCCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS------CGGGGGG
T ss_pred             HHhcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC------cHHHhhh
Confidence            345677 889999998863 6666677776555 99999999988887754    3422   33322      2222111


Q ss_pred             HhcCCCccEEEEcCC--------C------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDGGADYCFECVG--------L------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g--------~------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+..+.||+|+..-+        .                  ...++.+.+.|+++ |+++.+-
T Consensus       114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  176 (259)
T 3lpm_A          114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG-GKANFVH  176 (259)
T ss_dssp             TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC-cEEEEEE
Confidence            122348999996311        0                  13578889999997 9998864

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.39  E-value=0.028  Score=46.24  Aligned_cols=94  Identities=15%  Similarity=0.119  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .+.++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++. +...+. .+-   .++    .  ..+.||+|
T Consensus        40 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~d~---~~~----~--~~~~fD~v  106 (211)
T 3e23_A           40 ELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVRT-MLF---HQL----D--AIDAYDAV  106 (211)
T ss_dssp             TSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCEE-CCG---GGC----C--CCSCEEEE
T ss_pred             hcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceEE-eee---ccC----C--CCCcEEEE
Confidence            456788999999864 6677777765 77 999999999988888764 433221 111   111    0  12389999


Q ss_pred             EEcCC--------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          228 FECVG--------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +....        -...++.+.+.|+++ |.++..-.
T Consensus       107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  142 (211)
T 3e23_A          107 WAHACLLHVPRDELADVLKLIWRALKPG-GLFYASYK  142 (211)
T ss_dssp             EECSCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EecCchhhcCHHHHHHHHHHHHHhcCCC-cEEEEEEc
Confidence            86431        124578899999997 98887643

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=95.39  E-value=0.036  Score=46.11  Aligned_cols=102  Identities=22%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ....++.+||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+..
T Consensus        54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~l~~~~~  128 (221)
T 3u81_A           54 IREYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEINPDCAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKK  128 (221)
T ss_dssp             HHHHCCSEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGTTT
T ss_pred             HHhcCCCEEEEECCCC-CHHHHHHHHhCCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCceEEEE---CCHHHHHHHHHH
Confidence            3445678999999864 77888888865  55 99999999988887754    35321111111   344444433332


Q ss_pred             ----CCccEEEEcCCCHH------HHHHHHHHhhcCCcEEEEecc
Q 019535          222 ----GGADYCFECVGLAS------LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 ----g~~d~v~d~~g~~~------~~~~~~~~l~~~~G~~v~~g~  256 (339)
                          +.||+||-......      .++.+ +.|+++ |.++.-..
T Consensus       129 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg-G~lv~~~~  171 (221)
T 3u81_A          129 KYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG-TVLLADNV  171 (221)
T ss_dssp             TSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT-CEEEESCC
T ss_pred             hcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC-eEEEEeCC
Confidence                47999984332222      12222 678997 98876544

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.39  E-value=0.027  Score=49.54  Aligned_cols=97  Identities=13%  Similarity=0.150  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--------C--ceEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--------V--TEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--------a--~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        .  ..++.      .+..+.+.. 
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~------~Da~~~l~~-  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHhh-
Confidence            45678999998763 677777777655459999999999888876521        1  12222      344443433 


Q ss_pred             cCCCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          220 TDGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       220 ~~g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..+.||+|| |...         ....++.+.+.|+++ |.++...
T Consensus       165 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          165 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            334899998 4432         123488999999998 9988764

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.39  E-value=0.051  Score=46.49  Aligned_cols=97  Identities=20%  Similarity=0.224  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceEEeCCCCCCccHHHHHHHhcC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+.++.+||-+|+|. |..+..+++.-+. +|++++.+++..+.+++    .|.   ..++..+-   .++     ....
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----~~~~  112 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMVLAGHVTG-QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM---DDL-----PFRN  112 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHTTCSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----CCCT
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh---hhC-----CCCC
Confidence            477899999999874 8888888888555 99999999998877754    332   22222221   111     0112


Q ss_pred             CCccEEEEc-----CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          222 GGADYCFEC-----VGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g~~d~v~d~-----~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+|+|+..     .+-...++.+.+.|+++ |+++....
T Consensus       113 ~~fD~i~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  151 (267)
T 3kkz_A          113 EELDLIWSEGAIYNIGFERGLNEWRKYLKKG-GYLAVSEC  151 (267)
T ss_dssp             TCEEEEEESSCGGGTCHHHHHHHHGGGEEEE-EEEEEEEE
T ss_pred             CCEEEEEEcCCceecCHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            379999853     23345588889999997 99988754

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=95.36  E-value=0.036  Score=49.75  Aligned_cols=132  Identities=10%  Similarity=0.060  Sum_probs=75.2

Q ss_pred             EEEEEccCHHHH-HHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCC-CccEEEE
Q 019535          155 TVVIFGLGSIGL-AVAEGARLC-GATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE  229 (339)
Q Consensus       155 ~VLI~G~G~iG~-~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d  229 (339)
                      +|.|+|+|.+|. ..+...+.. ++ ++++++......+++++++.  ..+++       ++.    ++... .+|+|+.
T Consensus         4 rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~a~~~~~~~~~~~~-------~~~----~ll~~~~~D~V~i   71 (349)
T 3i23_A            4 KMGFIGFGKSANRYHLPYVMIRETL-EVKTIFDLHVNEKAAAPFKEKGVNFTA-------DLN----ELLTDPEIELITI   71 (349)
T ss_dssp             EEEEECCSHHHHHTTHHHHTTCTTE-EEEEEECTTCCHHHHHHHHTTTCEEES-------CTH----HHHSCTTCCEEEE
T ss_pred             EEEEEccCHHHHHHHHHHHhhCCCe-EEEEEECCCHHHHHHHhhCCCCCeEEC-------CHH----HHhcCCCCCEEEE
Confidence            689999999997 566655544 67 77766644334445555422  13331       222    22333 7999999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCeEE-eeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKILM-GSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      |++...-.+.+..++..  |+-|++..+...... ...+... ..+++.+. ++.   ......++.+.+++.+|++
T Consensus        72 ~tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~~~~i~~g~i  143 (349)
T 3i23_A           72 CTPAHTHYDLAKQAILA--GKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQN---RRFDGDYLAMKQVVEQGFL  143 (349)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG---GGGCHHHHHHHHHHHHTTT
T ss_pred             eCCcHHHHHHHHHHHHc--CCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEec---ccCCHHHHHHHHHHhcCCC
Confidence            99988768888888887  577777533211100 0111122 22344433 221   1123457778888888765

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.33  E-value=0.077  Score=44.11  Aligned_cols=101  Identities=16%  Similarity=0.191  Sum_probs=64.6

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      ...++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    ..-..++..+-   .+.. .... ..
T Consensus        68 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~---~~~~-~~~~-~~  141 (227)
T 1g8a_A           68 NFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKPE-EYRA-LV  141 (227)
T ss_dssp             CCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCGG-GGTT-TC
T ss_pred             hcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC---CCcc-hhhc-cc
Confidence            34577899999999875 8888888888652 399999999876655533    21112332222   1110 0001 12


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhhcCCcEEEEe
Q 019535          222 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       222 g~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.+|+|+.....+    ..+..+.+.|+++ |+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            3799999554433    2278889999997 998887

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.33  E-value=0.055  Score=45.95  Aligned_cols=95  Identities=15%  Similarity=0.175  Sum_probs=64.6

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ..+.++.+||-+|+|. |..+..+++. +. +|++++.+++..+.+++.    .. ..++..+-   .++     ....+
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~~~~~  103 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA---RAI-----PLPDE  103 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT---TSC-----CSCTT
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEccc---ccC-----CCCCC
Confidence            3567889999999864 6777777765 77 999999999988888664    11 12222221   111     11223


Q ss_pred             CccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEe
Q 019535          223 GADYCFECVG------LASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       223 ~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .+|+|+....      -...++.+.+.|+++ |.++..
T Consensus       104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~  140 (263)
T 2yqz_A          104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPG-GALLEG  140 (263)
T ss_dssp             CEEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CeeEEEECCchhhcCCHHHHHHHHHHHCCCC-cEEEEE
Confidence            7999986432      244588899999997 998876

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.33  E-value=0.068  Score=44.91  Aligned_cols=102  Identities=21%  Similarity=0.258  Sum_probs=68.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +....+++++.+||-+|+|. |..+..+++. +. ++++++.+++..+.+++    .+..  .++..+-   .++     
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~-----   81 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   81 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc---ccC-----
Confidence            34567788999999999875 7777777665 45 89999999988877754    2322  2222211   111     


Q ss_pred             HhcCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          218 DMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ....+.||+|+....      -...++.+.+.|+++ |+++.....
T Consensus        82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  126 (239)
T 1xxl_A           82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVDHY  126 (239)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCC-cEEEEEEcC
Confidence            112237999986432      134588999999998 999887543

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.33  E-value=0.031  Score=49.41  Aligned_cols=96  Identities=20%  Similarity=0.195  Sum_probs=64.6

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc------C---Cc--eEEeCCCCCCccHHHHHHHh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------G---VT--EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~------g---a~--~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.      +   ..  .++.      .+..+.+.. 
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE------chHHHHHHh-
Confidence            4568999998763 66777777765545999999999888877652      1   11  2222      344443433 


Q ss_pred             cCCCccEEE-EcCC------------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          220 TDGGADYCF-ECVG------------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       220 ~~g~~d~v~-d~~g------------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..+.||+|+ |...            ....++.+.+.|+++ |.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCC-cEEEEEc
Confidence            334899998 4322            235588999999998 9988764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.32  E-value=0.069  Score=45.44  Aligned_cols=79  Identities=22%  Similarity=0.312  Sum_probs=49.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH-HHHh----cCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~-~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .+.++||.|+ |.+|...++.+...|+ +|++++++.++.+ .+++    .+.. ..+  |..+  .+.+.+.+.+..  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHHh
Confidence            3568999987 8999999999888999 8999998654332 2222    2432 222  3333  122223333322  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -+++|++|+++|.
T Consensus        90 ~~~id~li~~Ag~  102 (265)
T 1h5q_A           90 LGPISGLIANAGV  102 (265)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2369999998874

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.32  E-value=0.05  Score=46.98  Aligned_cols=94  Identities=18%  Similarity=0.256  Sum_probs=61.5

Q ss_pred             cccchhhhhhHHHHHhcCC-CCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCC
Q 019535          132 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  209 (339)
Q Consensus       132 ~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~  209 (339)
                      .+||....+.. +.+..++ -.|.+++|+|.| .+|..+++++...|+ .|+...+..                      
T Consensus       140 ~~PcTp~gv~~-lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------  195 (285)
T 3l07_A          140 LESCTPKGIMT-MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT----------------------  195 (285)
T ss_dssp             CCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------
T ss_pred             CCCCCHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence            34543333333 3333433 478999999985 589999999999999 777765321                      


Q ss_pred             ccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          210 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       210 ~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .++.+.++     .+|++|.++|.+..+.  .+.++++ -.++++|..
T Consensus       196 ~~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          196 TDLKSHTT-----KADILIVAVGKPNFIT--ADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             SSHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             hhHHHhcc-----cCCEEEECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence            23333332     3799999999875332  2456776 788888764

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.32  E-value=0.12  Score=45.83  Aligned_cols=134  Identities=10%  Similarity=0.042  Sum_probs=79.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC---CCEEEEE-cCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG---ATRIIGV-DVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G---~~~Vi~~-~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ++.|+|+|.+|...+..++..+   + +++++ ++++++.+ +++++|...++       .++.+.+.+   ..+|+|+-
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~-~l~av~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~vD~V~i   72 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEH-QVVAVAARDLSRAKEFAQKHDIPKAY-------GSYEELAKD---PNVEVAYV   72 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTE-EEEEEECSSHHHHHHHHHHHTCSCEE-------SSHHHHHHC---TTCCEEEE
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCe-EEEEEEcCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEE
Confidence            6899999999988777666553   3 45554 55655544 44667865544       234333322   37999999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHH-hhcCCeE-EeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV-LHSGKIL-MGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      |++...-.+.+..++..  |+-|++..+.....- ...+... ..+++.+ .++..   .....++.+.+++.+|++-
T Consensus        73 ~tp~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~---r~~p~~~~~k~~i~~g~iG  145 (334)
T 3ohs_X           73 GTQHPQHKAAVMLCLAA--GKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWT---RFFPASEALRSVLAQGTLG  145 (334)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGG---GGSHHHHHHHHHHHHTTTC
T ss_pred             CCCcHHHHHHHHHHHhc--CCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhH---hcCHHHHHHHHHHhcCCCC
Confidence            99988778888888877  577777643211100 1111122 2234433 34321   1234577788888877653

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.31  E-value=0.011  Score=52.23  Aligned_cols=95  Identities=16%  Similarity=0.202  Sum_probs=60.7

Q ss_pred             CCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHH-HHHHhcCCc-eEEe----CCCCCCccHHHHHHHhcCCC
Q 019535          151 EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGVT-EFVN----SKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       151 ~~~~~VLI~G~G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~~~~ga~-~vi~----~~~~~~~~~~~~l~~~~~g~  223 (339)
                      -.+.+++|+|+| .+|..+++++...|+ .|+++.++..+. +....++.. +...    ++.   .++.+.+++     
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~---~~L~e~l~~-----  245 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSE---DLLKKCSLD-----  245 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCH---HHHHHHHHH-----
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccccccH---hHHHHHhcc-----
Confidence            368899999998 569999999999998 888887763321 112223321 1110    111   244455544     


Q ss_pred             ccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535          224 ADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       224 ~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +|+||.++|.+.. +..  +.++++ -.++++|..
T Consensus       246 ADIVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~  277 (320)
T 1edz_A          246 SDVVITGVPSENYKFPT--EYIKEG-AVCINFACT  277 (320)
T ss_dssp             CSEEEECCCCTTCCBCT--TTSCTT-EEEEECSSS
T ss_pred             CCEEEECCCCCcceeCH--HHcCCC-eEEEEcCCC
Confidence            7999999998762 222  235776 788888765

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.31  E-value=0.04  Score=48.88  Aligned_cols=98  Identities=13%  Similarity=0.168  Sum_probs=64.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC-------ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-------TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga-------~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++. ..       ..+ ....   .+..+.+.. ..+
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v-~~~~---~D~~~~l~~-~~~  188 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRV-NVFI---EDASKFLEN-VTN  188 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTE-EEEE---SCHHHHHHH-CCS
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcE-EEEE---ccHHHHHhh-cCC
Confidence            4568999998764 66677777765544999999999988888753 11       111 1111   344444433 234


Q ss_pred             CccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEec
Q 019535          223 GADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       223 ~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .||+|+ |...         ....++.+.+.|+++ |.++...
T Consensus       189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            899998 4421         145588999999997 9988864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.31  E-value=0.042  Score=46.78  Aligned_cols=78  Identities=18%  Similarity=0.300  Sum_probs=49.3

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh-cCCc-eEE--eCCCCCCccHHHHHHHhcC--CC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~-~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      ++++||.|+ +++|.+.++.+...|  + +|+.+++++++.+.+.+ ++.. ..+  |..+  .+.+.+.+.+...  ++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE--DSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence            568899987 899999887766664  6 89999998877666543 4432 222  3333  1222222222211  37


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++++++|.
T Consensus        79 id~lvnnAg~   88 (254)
T 3kzv_A           79 IDSLVANAGV   88 (254)
T ss_dssp             CCEEEEECCC
T ss_pred             ccEEEECCcc
Confidence            9999998874

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.31  E-value=0.14  Score=44.82  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=38.9

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  198 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga  198 (339)
                      ++|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga   47 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGA   47 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTC
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCC
Confidence            478999999999988888888899 99999999999998887775

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.29  E-value=0.074  Score=46.98  Aligned_cols=100  Identities=17%  Similarity=0.225  Sum_probs=66.6

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~  218 (339)
                      ....++++++||-+|+|+ |..+..+++..+ ..+|++++.++++.+.+++    +|..  .++..+.   .++.    .
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~----~  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIG----E  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGG----G
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcc----c
Confidence            445688899999998764 667777887763 2389999999998877754    4643  2332222   1111    1


Q ss_pred             hcCCCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MTDGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~~g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       ..+.||.|+ |  |+|.                         ...++.+.+.|+++ |+++...
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~st  246 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  246 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEe
Confidence             233799998 4  4332                         24578899999997 9987754

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.29  E-value=0.059  Score=46.27  Aligned_cols=93  Identities=12%  Similarity=0.111  Sum_probs=63.8

Q ss_pred             cccchhhhhhHHHHHhcCCCCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCc
Q 019535          132 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  210 (339)
Q Consensus       132 ~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~  210 (339)
                      .+||....... +.+..+ -.|.+++|+|.| .+|..+++++...|+ .|++..+.                   .   .
T Consensus       131 ~~PcTp~gv~~-lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~-------------------t---~  185 (276)
T 3ngx_A          131 LVPATPRAVID-IMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSK-------------------T---K  185 (276)
T ss_dssp             SCCHHHHHHHH-HHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---S
T ss_pred             CCCCcHHHHHH-HHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCC-------------------c---c
Confidence            34543333333 344445 679999999985 689999999999999 88877642                   1   3


Q ss_pred             cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          211 SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       211 ~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++.+.+++     +|++|.++|.+..+..  +.++++ ..++++|..
T Consensus       186 ~L~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          186 DIGSMTRS-----SKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             CHHHHHHH-----SSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             cHHHhhcc-----CCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            45555544     7999999998753322  346776 788888764

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.27  E-value=0.04  Score=46.24  Aligned_cols=96  Identities=18%  Similarity=0.239  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC---ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga---~~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      +.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++...   ..++..+-   .++     ....+.+|+
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~-----~~~~~~fD~  119 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDL---SSL-----PFENEQFEA  119 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBT---TBC-----SSCTTCEEE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcch---hcC-----CCCCCCccE
Confidence            45788999999864 6777777766 88 99999999999988877531   12222221   111     111237999


Q ss_pred             EEEcCC-----C-HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          227 CFECVG-----L-ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       227 v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+....     . ...++.+.+.|+++ |.++.....
T Consensus       120 v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~~  155 (242)
T 3l8d_A          120 IMAINSLEWTEEPLRALNEIKRVLKSD-GYACIAILG  155 (242)
T ss_dssp             EEEESCTTSSSCHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEcChHhhccCHHHHHHHHHHHhCCC-eEEEEEEcC
Confidence            986332     1 24588999999997 998887543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.27  E-value=0.12  Score=48.63  Aligned_cols=82  Identities=17%  Similarity=0.191  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-------HHHHHhcCCc-eEE--eCCCCCCccHHHHHHH
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVT-EFV--NSKNCGDKSVSQIIID  218 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~~ga~-~vi--~~~~~~~~~~~~~l~~  218 (339)
                      ++++.++||.|+ |.+|...++.+...|+++|+.+.++...       .+.++..|.. .++  |..+  .+.+.+.+..
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d--~~~v~~~~~~  300 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLGG  300 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC--HHHHHHHHHH
Confidence            456889999986 9999999988888899668989887641       1233445643 222  3222  1223333333


Q ss_pred             hcC-CCccEEEEcCCC
Q 019535          219 MTD-GGADYCFECVGL  233 (339)
Q Consensus       219 ~~~-g~~d~v~d~~g~  233 (339)
                      ... +.+|.||++.|.
T Consensus       301 i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHhcCCCcEEEECCcc
Confidence            322 278999999874

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.25  E-value=0.032  Score=47.29  Aligned_cols=100  Identities=9%  Similarity=0.074  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHH----HhcCCc---eEEeCCCCCCccHHHHHHH
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIG----KRFGVT---EFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~----~~~ga~---~vi~~~~~~~~~~~~~l~~  218 (339)
                      ....++.+||-+|+|. |..++.+|+..  +. +|++++.+++..+.+    +..|..   .++.      .+..+.+..
T Consensus        56 ~~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~~  127 (242)
T 3r3h_A           56 IRLTRAKKVLELGTFT-GYSALAMSLALPDDG-QVITCDINEGWTKHAHPYWREAKQEHKIKLRL------GPALDTLHS  127 (242)
T ss_dssp             HHHHTCSEEEEEESCC-SHHHHHHHHTSCTTC-EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HhhcCcCEEEEeeCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHH
Confidence            3455678999999863 77788888876  45 999999988754433    444532   2222      234443333


Q ss_pred             hc----CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEecc
Q 019535          219 MT----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       219 ~~----~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.    .+.||+|| |..-.  ...++.+.+.|+++ |.++.-..
T Consensus       128 ~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~~  171 (242)
T 3r3h_A          128 LLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPK-GLIAIDNI  171 (242)
T ss_dssp             HHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             HhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCC-eEEEEECC
Confidence            31    24799998 44322  23477889999997 98887543

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.24  E-value=0.059  Score=43.18  Aligned_cols=101  Identities=13%  Similarity=0.099  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC----ceEEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV----TEFVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga----~~vi~~~~~~~~~~~~~  215 (339)
                      +.+....+++.+||-+|+|. |..+..+++. +. ++++++.+++..+.+++.    +.    ..++..+-   .+.   
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~~---  114 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YEN---  114 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TTT---
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hcc---
Confidence            45566777889999999873 7777777777 77 999999999888777542    32    22333222   110   


Q ss_pred             HHHhcCCCccEEEEcCCC-------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          216 IIDMTDGGADYCFECVGL-------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~g~-------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                         ...+.+|+|+-...-       ...++.+.+.|+++ |.++.....
T Consensus       115 ---~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  159 (194)
T 1dus_A          115 ---VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQT  159 (194)
T ss_dssp             ---CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             ---cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEECC
Confidence               112379999864321       24477888899997 998887653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.23  E-value=0.14  Score=48.32  Aligned_cols=78  Identities=17%  Similarity=0.277  Sum_probs=50.9

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-------HHHHHHhcCCce-EE--eCCCCCCccHHHHHHHhcCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-------KFEIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-------~~~~~~~~ga~~-vi--~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .++||.|+ |++|...++.+...|+++|+.+.++..       ..+.+++.|... ++  |..+  .+.+.+.+.+....
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd--~~~v~~~~~~i~~~  317 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD--REALAALLAELPED  317 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHTCCTT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHh
Confidence            89999986 999999998888899878888887532       123344566542 22  2222  12333334443333


Q ss_pred             -CccEEEEcCCC
Q 019535          223 -GADYCFECVGL  233 (339)
Q Consensus       223 -~~d~v~d~~g~  233 (339)
                       ++|++|++.|.
T Consensus       318 g~ld~vVh~AGv  329 (496)
T 3mje_A          318 APLTAVFHSAGV  329 (496)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCeEEEECCcc
Confidence             79999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-38
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-36
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	6e-34
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-31
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-31
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	9e-31
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-29
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	4e-18
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-17
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-16
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-14
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	7e-14
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-13
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-11
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-09
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-09
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	1e-08
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	5e-08
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-07
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	5e-07
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-06
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	2e-06
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	7e-06
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-05
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	3e-04

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  132 bits (332), Expect = 3e-38
 Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 2/177 (1%)

Query: 125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 184
            PP + CL+ CG STG GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 244
           +  +KFE     G TE ++ K+   K +S+++ +MT     Y FE +G    + +A A C
Sbjct: 62  LNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 120

Query: 245 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 301
              +G ++V+GV      L+     +L +G+   G +FGGLK++ D+P L+  ++ K
Sbjct: 121 HMNYGTSVVVGVPPSAKMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  127 bits (320), Expect = 2e-36
 Identities = 70/176 (39%), Positives = 99/176 (56%), Gaps = 3/176 (1%)

Query: 127 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186
           P  +CL+ CG +TG GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV   
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 187 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 246
            +KF      G TE +N K+  DK + ++I + T+GG DY  EC G    +  A      
Sbjct: 62  KDKFPKAIELGATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC 120

Query: 247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
           G G T+VLG+  P  +L L    +L +G+ L GS+FGG K + ++  L+  YM K+
Sbjct: 121 GSGVTVVLGLASPNERLPLDPL-LLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  120 bits (302), Expect = 6e-34
 Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 2/177 (1%)

Query: 126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185
           P  + CL+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 186 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
             +KF   K  G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC+
Sbjct: 62  NKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
           + +G ++++G   P SQ    +  +L SG+   G++FGG K+K  +P L+  +M K+
Sbjct: 121 EAYGVSVIVG-VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  115 bits (287), Expect = 1e-31
 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 4/177 (2%)

Query: 126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185
              R CL+ CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 186 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
             EKF   K  G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C  
Sbjct: 62  NGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
            GWG   V+G      ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K+
Sbjct: 121 LGWGSCTVVGA--KVDEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  113 bits (283), Expect = 4e-31
 Identities = 78/177 (44%), Positives = 114/177 (64%), Gaps = 2/177 (1%)

Query: 126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185
           P ++ CLL CG+STG GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 186 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
             +KF   K FG TE +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C 
Sbjct: 62  NKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
           KGWG ++V+GV   G +++   F  L +G+   G+ FGG K+   +P L+  YM K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPF-QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  112 bits (281), Expect = 9e-31
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 4/178 (2%)

Query: 125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 184
           VP      L CG+ TG GA      V   S+ V +G G++GL+    A++CGA+ II VD
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 244
           ++  + E+ K+ G T  +NSK    +     I ++TDGG ++  E  G   ++++     
Sbjct: 61  IVESRLELAKQLGATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 245 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
               GK  V+G  Q G+       ++L  GK ++G + G    K  IP L++ Y   +
Sbjct: 118 GI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  108 bits (271), Expect = 3e-29
 Identities = 77/177 (43%), Positives = 107/177 (60%), Gaps = 3/177 (1%)

Query: 126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185
           P +  CLL CGVSTG GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 186 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 245
             +KFE  K FG T+FVN  +   + +SQ++  MT+GG D+  ECVG   +++ A   C 
Sbjct: 62  NPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 246 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 302
           KGWG ++++G          +    L +G+   GS+FGG K K  +P ++K Y+DK+
Sbjct: 121 KGWGVSVLVGW--TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 88.0 bits (217), Expect = 2e-21
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 1/154 (0%)

Query: 6   PSNKTAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS 65
            ++       + +  FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S
Sbjct: 47  HTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQS 106

Query: 66  KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 125
            K N C       SP +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+V
Sbjct: 107 PKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV 165

Query: 126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF 159
             +        + +   A     + +   TV+  
Sbjct: 166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 4e-18
 Identities = 51/142 (35%), Positives = 69/142 (48%), Gaps = 1/142 (0%)

Query: 17  CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 76
               FP ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC     
Sbjct: 56  PEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRV 115

Query: 77  KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 136
                +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP +  +     +  
Sbjct: 116 TQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLS 174

Query: 137 VSTGVGAAWRTANVEVGSTVVI 158
                 A     + +   TVV 
Sbjct: 175 FDEINKAFELMHSGKSIRTVVK 196

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 77.3 bits (189), Expect = 1e-17
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 184
           +P   A +++  ++TG   A   A++E+GS+VV+ G+G++GL    GA+L GA RIIGV 
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 244
                 E  K +G T+ +N          Q++      G D      G +  + +A    
Sbjct: 60  SRPICVEAAKFYGATDILN--YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117

Query: 245 RKGWGKTIVLGVDQPGSQLSLS--SFEVLHSGKILMGSLFGGLKAKSDIPILL 295
           + G G    +     G  L +    +    + K + G L  G + +++    +
Sbjct: 118 KPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDM 169

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 75.3 bits (184), Expect = 1e-16
 Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
              + FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C    
Sbjct: 56  IIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKND 115

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
                 +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP +  N       
Sbjct: 116 MGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL----- 169

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 168
                V        +     ++  G G   + +
Sbjct: 170 -----VSTKLTLDQINKAFELLSSGQGVRSIMI 197

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 69.1 bits (168), Expect = 2e-14
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 6/146 (4%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC---S 72
           + +A+FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC    
Sbjct: 56  KKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR 115

Query: 73  AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL 132
            F +        +  +     +G +I+HF+ VSSFS+YTV+  A++ +VD     +    
Sbjct: 116 NFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVT 175

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVI 158
            +    +   A      ++ G ++  
Sbjct: 176 HALPFESINDAI---DLMKEGKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 67.2 bits (163), Expect = 7e-14
 Identities = 50/145 (34%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
                 P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C    
Sbjct: 56  TLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND 115

Query: 76  FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 135
             +     +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D          L  
Sbjct: 116 LSMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFA---LDPLIT 171

Query: 136 GVSTGVGAAWRTANVEVGSTVVIFG 160
            V            +  G ++    
Sbjct: 172 HVLPFEKINEGFDLLRSGESIRTIL 196

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 65.3 bits (158), Expect = 3e-13
 Identities = 41/192 (21%), Positives = 66/192 (34%), Gaps = 21/192 (10%)

Query: 130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 189
              LS  + TG   A   A V  GSTV + G G +GLA A  ARL GA  +I  D+   +
Sbjct: 4   LTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 190 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL--------------- 233
               K  G      S    D  + + I  +      D   + VG                
Sbjct: 63  LAHAKAQGFEIADLSL---DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 234 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPI 293
           A+++       R   GK  + G+       ++ +   + S  I  G  +    +      
Sbjct: 120 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT 178

Query: 294 LLKRYMDKELEL 305
            + +Y    ++ 
Sbjct: 179 PVMKYNRALMQA 190

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 63.0 bits (152), Expect = 1e-12
 Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 3/173 (1%)

Query: 130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 189
             +  C  +T   A         G TVVI G G +GL     AR  GA  +I +     +
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 65

Query: 190 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGW 248
            ++ +  G    +N +    +   + I+D+T G GAD+  E  G +  + E     R+G 
Sbjct: 66  LKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG- 124

Query: 249 GKTIVLGVDQPGSQLSLSSFEVLHS-GKILMGSLFGGLKAKSDIPILLKRYMD 300
           G   V GV  P   +    +E L        G              +  R   
Sbjct: 125 GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQ 177

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 8/148 (5%)

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           LS G+      A R   V +G  V++ G G IG+     A+  GA +++  D+ + +   
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252
            K  G    +       + +++ +        +   EC G  + +Q      R G     
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GT 123

Query: 253 VLGVDQPGSQLSLSSFEVLHSGKILMGS 280
           ++ V       ++           + G 
Sbjct: 124 LVLVGLGSEMTTVPLLHAAIREVDIKGV 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 53.4 bits (127), Expect = 3e-09
 Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 11/172 (6%)

Query: 130 ACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 188
              L+    T   A  + A  +  G+ V I G+G +G    +  ++     +I +DV  E
Sbjct: 9   MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE 68

Query: 189 KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW 248
           K ++ +R G    V+++      V Q++      G +   + VG  + V        +  
Sbjct: 69  KLKLAERLGADHVVDAR---RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM- 124

Query: 249 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 300
           G+ I++G           +  V+ S     GSL G      ++  L+   + 
Sbjct: 125 GRLIIVGYGGELRF---PTIRVISSEVSFEGSLVGNYV---ELHELVTLALQ 170

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 53.8 bits (128), Expect = 3e-09
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 2/144 (1%)

Query: 16  QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP 75
           +     P +LGHE  G++E++G NV  +  GD V+  +   C +C  C +     CS F 
Sbjct: 51  KYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFF 109

Query: 76  FKISPWMPRDQTSRF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 134
            +       +         +G    HF + SSF+ Y +    + VKV    P ++     
Sbjct: 110 GRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFY 169

Query: 135 CGVSTGVGAAWRTANVEVGSTVVI 158
                   A      + +   + I
Sbjct: 170 AFDEINQAAIDSRKGITLKPIIKI 193

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 192
           LS GV      A R A V++G+TV++ G G IGL     A+  GA  +        + E+
Sbjct: 12  LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP-RRLEV 65

Query: 193 GKRFGVTEFVN--SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 250
            K  G    +        + S+ + I        +   +C G    +       R   G 
Sbjct: 66  AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124

Query: 251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 281
            +++G       +++           +    
Sbjct: 125 LMLVG--MGSQMVTVPLVNACAREIDIKSVF 153

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (119), Expect = 5e-08
 Identities = 27/142 (19%), Positives = 48/142 (33%), Gaps = 18/142 (12%)

Query: 21  FPRILGHEAIGVVESVGENVD-GVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKI 78
            P ++GHE +G V  +G   + G+  G  V +   +  C EC  C++     C+ F    
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121

Query: 79  SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 138
           S                     +VS   ++ Y  +    VV +   +      +   GV 
Sbjct: 122 SQPYE---------------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVH 166

Query: 139 TGVGAAWRTANVEVGSTVVIFG 160
                     +V    T+V + 
Sbjct: 167 EAF-ERMEKGDVRYRFTLVGYD 187

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-07
 Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 24/147 (16%)

Query: 12  GKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 71
           G+        P +LGHEA G VE VG +V  +  GD V     A       C+  + NL 
Sbjct: 54  GRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLS 113

Query: 72  SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 131
            +  F  +P                         +   +   + A   K+   V P    
Sbjct: 114 PSIFFCATPPDDG---------------------NLCRFYKHNAAFCYKLPDNVKPLVTH 152

Query: 132 LLSCGVSTGVGAAWRTANVEVGSTVVI 158
                 +     A+ T    +G  +++
Sbjct: 153 RFPLEKAL---EAFETFKKGLGLKIML 176

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 46.9 bits (110), Expect = 5e-07
 Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 11/164 (6%)

Query: 123 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 182
           P         L C   T      R      G  V + G+G +G    + A       ++ 
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVA 59

Query: 183 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 242
                 K E  K  G  E VNS+N  +               D+    V     + +   
Sbjct: 60  FTTSEAKREAAKALGADEVVNSRNADEM-------AAHLKSFDFILNTVAAPHNLDDFTT 112

Query: 243 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 286
             ++  G   ++G        S   F ++   + + GS+ GG+ 
Sbjct: 113 LLKRD-GTMTLVGA-PATPHKSPEVFNLIMKRRAIAGSMIGGIP 154

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 22/149 (14%)

Query: 12  GKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 71
           G+        P ++GHEA G V  VG+NV  + +GD V       C  C  C+  K NLC
Sbjct: 48  GRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC 107

Query: 72  SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 131
               F  +P                         + + Y V       K+       +  
Sbjct: 108 PDLTFCATPPDD---------------------GNLARYYVHAADFCHKLPDNCNVKQLV 146

Query: 132 LLSCGVSTGVGAAWRTANVEVGSTVVIFG 160
             S  +   V  A+  A  +  +T+ +  
Sbjct: 147 THSFKLEQTVD-AFEAARKKADNTIKVMI 174

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 106 SFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS 163
             +EY ++  A  +++K+           ++  V   V +    A    G     F  G 
Sbjct: 133 GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDD-APRGYG----EFDAGV 187

Query: 164 IGLAVAEGARLCGA 177
               V +  +   A
Sbjct: 188 PKKFVIDPHKTFSA 201

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (101), Expect = 7e-06
 Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 184
           +P + A  L CG  T V +         G  V I GLG IG      ++         + 
Sbjct: 1   IPSHLAAPLLCGGLT-VYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVIS 58

Query: 185 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-LVQEAYAC 243
             S K E   + G   ++ +   GD        +      D    C    + +       
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGD------WGEKYFDTFDLIVVCASSLTDIDFNIMPK 112

Query: 244 CRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 286
             K  G+ + + + +    LSL           +  S  G +K
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSL--KPYGLKAVSISYSALGSIK 153

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 16/147 (10%)

Query: 13  KPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLC 71
           +      V+P + GHE +G V +VG+ V+    GD V +   +  C  C  C     N C
Sbjct: 46  RSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC 105

Query: 72  SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP-NRA 130
                  +   P +                     +S+  V+   +V+++        RA
Sbjct: 106 DHMTGTYNSPTPDEPGHTLG--------------GYSQQIVVHERYVLRIRVADIEMIRA 151

Query: 131 CLLSCGVSTGVGAAWRTANVEVGSTVV 157
             ++      +    +   V    T+ 
Sbjct: 152 DQINEAYERMLRGDVKYRFVIDNRTLT 178

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 23/138 (16%)

Query: 21  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +       
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSP------ 115

Query: 81  WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 140
                                    +++EY ++     +     V P     +    +  
Sbjct: 116 ----------------RWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 141 VGAAWRTANVEVGSTVVI 158
                      +G  V+I
Sbjct: 160 AIDNLENFKA-IGRQVLI 176

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.88
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.86
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.86
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.84
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.83
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.83
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.81
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.81
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.81
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.75
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.73
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.68
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.59
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.55
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.47
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.45
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.4
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.31
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.58
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	98.49
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.98
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.76
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.65
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.63
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.63
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.58
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.55
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.54
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.45
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.45
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.42
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.4
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.36
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.35
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.31
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.28
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.27
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.27
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.27
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.25
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.24
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.23
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.22
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.22
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.21
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.2
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.19
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.19
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.19
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.18
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.17
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.16
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.15
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.14
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.14
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.13
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.12
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.1
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.09
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.08
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.07
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.05
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.03
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.02
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.01
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.99
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.99
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.98
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.96
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.91
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.9
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.9
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.9
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.87
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.87
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.85
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.84
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.84
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.79
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.78
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.76
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.76
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.71
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.7
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.68
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.67
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.63
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.61
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.6
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.57
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.57
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.56
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.54
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.53
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.53
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.52
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.5
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.5
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.5
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.47
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.47
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.46
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.46
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.45
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.44
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.44
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.38
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.35
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.35
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.28
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.27
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.26
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.24
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.23
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.2
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.15
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.11
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.1
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.08
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.02
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.02
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	96.01
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.99
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.99
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.9
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.89
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.83
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.71
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.67
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.51
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	95.45
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.42
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.41
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.39
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.35
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.35
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.34
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.28
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.26
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.25
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.25
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.14
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	95.12
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.11
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.05
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.05
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.03
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.99
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.96
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.87
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.85
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.8
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.79
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.75
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.75
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.74
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.74
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.63
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.56
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.53
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.5
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.5
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.44
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.44
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.44
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.37
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.36
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.31
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	94.23
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.17
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.17
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.13
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.11
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.09
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.07
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.04
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.0
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.98
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.97
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.89
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.88
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.7
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.64
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.6
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	93.57
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.56
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	93.54
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.52
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.49
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	93.48
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.46
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.45
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.41
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.41
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.4
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.37
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.34
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.33
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.22
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.2
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.2
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.12
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.11
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.98
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.91
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.86
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.86
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.8
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.8
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.73
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.69
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.68
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.66
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.51
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	92.49
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.45
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.44
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	92.4
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.27
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.22
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	92.19
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.15
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	92.11
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.02
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.02
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	91.93
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.89
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.85
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.8
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.77
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.68
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.61
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.58
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.4
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.21
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.21
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	91.2
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	91.16
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.96
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.94
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.83
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	90.8
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.78
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.6
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.52
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.52
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	90.51
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	90.49
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.47
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.47
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.4
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.36
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.28
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	90.27
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.27
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.91
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	89.86
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.83
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.82
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.66
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.62
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.54
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.51
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	89.46
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.45
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.27
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.06
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	88.91
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.86
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.79
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.63
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.6
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.58
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.53
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	88.31
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.31
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.24
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	88.22
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	87.99
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.97
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.9
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.89
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.76
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.76
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	87.75
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	87.74
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	87.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.38
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.35
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	87.29
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	87.09
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	87.08
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.04
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	87.02
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	86.92
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.87
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.83
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.57
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	86.54
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.48
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	86.43
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.37
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	86.36
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	86.19
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.08
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	86.07
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.97
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	85.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	85.77
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	85.76
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	85.64
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.61
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.56
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	85.49
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	85.25
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	84.96
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.91
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	84.84
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.48
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	84.31
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.27
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.2
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	84.11
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	83.81
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.76
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	83.72
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	83.46
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.39
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	83.38
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	83.27
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	82.92
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.81
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	82.75
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.66
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	82.23
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.15
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	81.99
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.79
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	81.71
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.36
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	81.19
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	80.98
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	80.89
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	80.81
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	80.74
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.65
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	80.56
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	80.5
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	80.44
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.21
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	80.21

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=1.8e-29  Score=206.20  Aligned_cols=174  Identities=31%  Similarity=0.557  Sum_probs=160.0

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      ++++.|+.++|++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35778999999999999999999999999999999999999999999999999888888999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          205 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      ++   +++.+++++++++++|+||||+|++..++.++++++++ |+++.+|.........+++..++.|++++.|+..+.
T Consensus        81 ~~---~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~  156 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  156 (174)
T ss_dssp             TT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             CC---cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence            88   89999999999889999999999998899999999997 999999976555667888999999999999998887


Q ss_pred             CCCCCcHHHHHHHHhCCC
Q 019535          285 LKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~  302 (339)
                      ...+++++++++++++|+
T Consensus       157 ~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         157 GSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             SCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHcCC
Confidence            776778999999999885

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=195.62  Aligned_cols=167  Identities=19%  Similarity=0.278  Sum_probs=147.8

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  203 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~  203 (339)
                      +|+++||+++++++|||+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999999999999999988899999999999986 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeec
Q 019535          204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  282 (339)
Q Consensus       204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~  282 (339)
                      +++   +++.+.+++.+++ ++|++|||+|+.. ++.++++++++ |+++.+|..   ...++++..++.|++++.++.+
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~---~~~~~~~~~~~~k~~~i~g~~~  151 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSR---GTIEINPRDTMAKESSIIGVTL  151 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCC---SCEEECTHHHHTTTCEEEECCG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHHH-HHHHHhccCCC-CEEEEEecC---CCCCCCHHHHHHCCCEEEEEEe
Confidence            998   8999999999988 9999999999765 99999999997 999999864   2356777888899999999875


Q ss_pred             CCCCCCCcHHHHHHHHhCC
Q 019535          283 GGLKAKSDIPILLKRYMDK  301 (339)
Q Consensus       283 ~~~~~~~~~~~~~~~l~~g  301 (339)
                      ... .++++++++++++++
T Consensus       152 ~~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         152 FSS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GGC-CHHHHHHHHHHHHHH
T ss_pred             cCC-CHHHHHHHHHHHHHH
Confidence            543 245677777777654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=8.6e-27  Score=189.85  Aligned_cols=172  Identities=40%  Similarity=0.695  Sum_probs=145.0

Q ss_pred             ccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCC
Q 019535          127 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  206 (339)
Q Consensus       127 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~  206 (339)
                      |.+||++.|++.|+|+++.+.++++++++|||+|+|++|++++|+++++|+++|++++++++|+++++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999989999999999999999999999999999999989999999999999999999999999766


Q ss_pred             CCCccHHHHHHHh-cCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCC
Q 019535          207 CGDKSVSQIIIDM-TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  285 (339)
Q Consensus       207 ~~~~~~~~~l~~~-~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  285 (339)
                        .++..+++.+. +++++|++||++|++...+.++..+.++.|+++.+|.......++++...++ ++.++.|+.+++.
T Consensus        82 --~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 --YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGGF  158 (174)
T ss_dssp             --CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH-TTCEEEECSGGGC
T ss_pred             --chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHh-CCCEEEEEEeCCC
Confidence              13344444444 4449999999999998889999888663389999998765566666655554 4789999988775


Q ss_pred             CCCCcHHHHHHHHhCCC
Q 019535          286 KAKSDIPILLKRYMDKE  302 (339)
Q Consensus       286 ~~~~~~~~~~~~l~~g~  302 (339)
                      . .+++.++++++++|+
T Consensus       159 ~-~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 K-GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             C-GGGHHHHHHHHHTTS
T ss_pred             C-HHHHHHHHHHHHcCC
Confidence            4 458999999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=4.1e-27  Score=191.51  Aligned_cols=172  Identities=36%  Similarity=0.721  Sum_probs=147.5

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      ++++||.++|++.|+|+++.+.++++++++|+|+|+|++|++++|+++.+|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            56789999999999999998999999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          206 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      .  .++..+.+.+.+.+ ++|++|||+|.+..++.++++++++.|+++.+|...  ....++...++. +.++.|+..++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~-~k~i~Gs~~Gs  156 (174)
T d1e3ia2          82 E--LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVIL-GRSINGTFFGG  156 (174)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHT-TCEEEECSGGG
T ss_pred             c--chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhc-cCEEEEEEeeC
Confidence            4  13344555555545 999999999999999999999998328999999763  445677666655 67899998888


Q ss_pred             CCCCCcHHHHHHHHhCCC
Q 019535          285 LKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~  302 (339)
                      +..++++.++++++++||
T Consensus       157 ~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         157 WKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHCcC
Confidence            777788999999998885

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=1.5e-26  Score=189.20  Aligned_cols=175  Identities=41%  Similarity=0.743  Sum_probs=145.5

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      ++++||+++|++.|+|+++.+.++++++++|||+|+|++|++++|+++.+|+++|++++++++++++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46789999999999999998899999999999999999999999999999988999999999999999999999999886


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCC
Q 019535          206 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  285 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  285 (339)
                      + ...+..+.+++.+++++|++||++|++..++.+..+++++ |+++.++...............+.++.++.|+.+++.
T Consensus        82 ~-~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW  159 (176)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c-hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCC
Confidence            5 1234555555555559999999999999889999999997 8887776544333333333334456899999998887


Q ss_pred             CCCCcHHHHHHHHhCCC
Q 019535          286 KAKSDIPILLKRYMDKE  302 (339)
Q Consensus       286 ~~~~~~~~~~~~l~~g~  302 (339)
                      ..++++.++++++++||
T Consensus       160 ~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         160 KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            77778999999999885

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.2e-26  Score=190.83  Aligned_cols=171  Identities=23%  Similarity=0.307  Sum_probs=146.2

Q ss_pred             ccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCC
Q 019535          127 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  206 (339)
Q Consensus       127 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~  206 (339)
                      ++.+|.+.|+++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45677888999999999988889999999999999999999999999999978999999999999999999999999988


Q ss_pred             CCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHH-HhhcCCeEEeeecCC
Q 019535          207 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE-VLHSGKILMGSLFGG  284 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~  284 (339)
                      ....+..+.+.+++.+ ++|+||||+|++..++.++++++++ |+++.+|...+..+.+++... ++.|++++.|++.+.
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            2222345567788888 9999999999988799999999997 999999976555666666544 677899999987553


Q ss_pred             CCCCCcHHHHHHHHhCC
Q 019535          285 LKAKSDIPILLKRYMDK  301 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g  301 (339)
                         .+++++++++++++
T Consensus       162 ---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 ---TSHFVKTVSITSRN  175 (182)
T ss_dssp             ---HHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHC
Confidence               35788888888775

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=7e-27  Score=190.29  Aligned_cols=171  Identities=28%  Similarity=0.421  Sum_probs=146.5

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      +|+++|+.++++++|||+++ +.++++++++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999975 67899999999999999999999999999999789999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHH--HhhcCCeEEeee
Q 019535          205 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE--VLHSGKILMGSL  281 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~~i~~~~  281 (339)
                      ++   +++.+.+++++++ ++|+||||+|++..++.++++++++ |+++.+|.......+.++...  ...++.++.++.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            88   8899999999998 9999999999988899999999997 999999987655554444332  344678888876


Q ss_pred             cCCCCCCCcHHHHHHHHhCCC
Q 019535          282 FGGLKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       282 ~~~~~~~~~~~~~~~~l~~g~  302 (339)
                      .+..  +...+.+++++.+|+
T Consensus       156 ~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--HHHHHHHHHHHHTTS
T ss_pred             CCCC--cccHHHHHHHHHcCC
Confidence            5432  234667788888774

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=2.2e-26  Score=187.15  Aligned_cols=168  Identities=24%  Similarity=0.299  Sum_probs=151.8

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  203 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~  203 (339)
                      +++.+||.++|++.|||+++ +..+++++++|+|+|+ |++|++++|+++..|+.+|++++++++++++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57889999999999999976 6689999999999995 999999999999999779999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeec
Q 019535          204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  282 (339)
Q Consensus       204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~  282 (339)
                      +++   +++.+++++.+.+ ++|++|||+|++..++.++++++++ |+++.+|...  .+..++...++.|++++.|++.
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~Gs~~  153 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG--ADLHYHAPLITLSEIQFVGSLV  153 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSC--CCCCCCHHHHHHHTCEEEECCS
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEecccc--CccccCHHHHHhCCcEEEEEec
Confidence            888   8899999999988 8999999999998899999999997 9999999764  3467788888999999999876


Q ss_pred             CCCCCCCcHHHHHHHHhCCC
Q 019535          283 GGLKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       283 ~~~~~~~~~~~~~~~l~~g~  302 (339)
                      ++   +++++++++++++|+
T Consensus       154 ~~---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         154 GN---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CC---HHHHHHHHHHHHTTS
T ss_pred             CC---HHHHHHHHHHHHcCC
Confidence            54   467999999999885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=4e-26  Score=186.13  Aligned_cols=172  Identities=37%  Similarity=0.739  Sum_probs=148.1

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      ++++||.++|++.|+|+++.+.++++++++|+|+|+|++|++++|+++.+|+++|++++.++++++.++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            47899999999999999988999999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          206 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      +  .....+.+.+.+.+ ++|++||++|.+...+.++..+.+++|+++.+|.........+++..++. +.++.|+.++.
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~-~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFT-GRTWKGCVFGG  159 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSGGG
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhC-CCEEEEEEEeC
Confidence            6  23345667776766 99999999999988888888776534899999987666666666665554 78999999888


Q ss_pred             CCCCCcHHHHHHHHhC
Q 019535          285 LKAKSDIPILLKRYMD  300 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~  300 (339)
                      ...++++.++++++.+
T Consensus       160 ~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CCHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC
Confidence            8778889999888754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=8.2e-27  Score=192.01  Aligned_cols=173  Identities=23%  Similarity=0.271  Sum_probs=145.7

Q ss_pred             cccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCC
Q 019535          128 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  206 (339)
Q Consensus       128 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~  206 (339)
                      +|||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+..|+ +++++++++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5789999999999999999999999999999986 9999999999999999 9999999999999999999999999988


Q ss_pred             CCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCC
Q 019535          207 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  285 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  285 (339)
                         +++.+++++.+++ ++|++|||+|++. ++.++++++++ |+++.+|............ ..+.++.++.++.+...
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGL-AALAKSASFSVVDLDLN  153 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEG-GGGTTTCEEEECCHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCC-CEEEEEccCCCCCCcccch-HHHhCCcEEEEEEccce
Confidence               8999999999988 9999999999876 99999999997 9999998654333223333 23456888887753321


Q ss_pred             C------CCCcHHHHHHHHhCCCCCCcc
Q 019535          286 K------AKSDIPILLKRYMDKELELDK  307 (339)
Q Consensus       286 ~------~~~~~~~~~~~l~~g~l~~~~  307 (339)
                      .      .++.++++++++++|++++.|
T Consensus       154 ~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         154 LKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             eccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            1      134578888999999887653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-25  Score=180.59  Aligned_cols=168  Identities=20%  Similarity=0.350  Sum_probs=144.1

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      +|+++||++. ++++||+++ ++++++++++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            5788988775 899999975 66899999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHh--cCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeee
Q 019535          205 KNCGDKSVSQIIIDM--TDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  281 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~--~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~  281 (339)
                      .+   ++..+..+.+  +.+ ++|++|||+|++..++.++++++++ |+++++|...  ....+++..++.|++++.|++
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~--~~~~~~~~~~~~k~l~i~Gs~  152 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVF  152 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECC
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHHCCcEEEEEe
Confidence            87   5554433332  234 8999999999999899999999997 9999999764  345788888999999999885


Q ss_pred             cCCCCCCCcHHHHHHHHhCCCCC
Q 019535          282 FGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       282 ~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      .    +.++++++++++++|+++
T Consensus       153 ~----~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         153 R----YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             S----CSSCHHHHHHHHHTTSCC
T ss_pred             C----CHhHHHHHHHHHHcCCCC
Confidence            2    246899999999999764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=1.3e-25  Score=183.53  Aligned_cols=174  Identities=38%  Similarity=0.659  Sum_probs=143.9

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|.+++++++..|+++|++++++++++++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999999999999999999999999999999999999988999999999999999999999999875


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          206 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      +  .++..+...+.+.+ ++|++||++|.+..++.++..++++ +..+.++..............++.+++++.|+..++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 D--YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA-YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             C--chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcC-CcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            5  13445445555544 9999999999999889999999996 555555544333333333334556799999999888


Q ss_pred             CCCCCcHHHHHHHHhCCC
Q 019535          285 LKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~  302 (339)
                      ...++++.++++++.+||
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence            777788999999998885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=2e-25  Score=181.70  Aligned_cols=165  Identities=21%  Similarity=0.350  Sum_probs=145.1

Q ss_pred             ccccccccchhhhhhHHHHHhc-CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          127 PNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       127 ~~~aa~l~~~~~ta~~al~~~~-~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      +.++|.++|+++|||+++.+.. .++++++|||+|+|++|++++|+++.+|+++|++++++++++++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5678899999999999988765 479999999999999999999999999988899999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          206 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      +    +..+.+.+.+.+ ++|++|||+|+...++.++++++++ |+++.+|..   ...++++..++.|++++.|+..++
T Consensus        86 ~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~---~~~~~~~~~l~~k~~~i~Gs~~~~  157 (172)
T d1h2ba2          86 R----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG---GELRFPTIRVISSEVSFEGSLVGN  157 (172)
T ss_dssp             S----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCS---SCCCCCHHHHHHTTCEEEECCSCC
T ss_pred             c----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCc---ccccCCHHHHHhCCcEEEEEEecC
Confidence            6    455666677777 9999999999998899999999997 999999963   235678888999999999997655


Q ss_pred             CCCCCcHHHHHHHHhCCC
Q 019535          285 LKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~  302 (339)
                         +++++++++++.+|+
T Consensus       158 ---~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 ---YVELHELVTLALQGK  172 (172)
T ss_dssp             ---HHHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               467999999999885

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.4e-26  Score=185.66  Aligned_cols=171  Identities=13%  Similarity=0.110  Sum_probs=136.3

Q ss_pred             CCccccccccchhhhhhHH---HHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce
Q 019535          125 VPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  200 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~a---l~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~  200 (339)
                      +|++|||+++++++|||++   +.+..+.+++++|||+|+ |++|.+++|+|+..|+ +|+++++++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5889999999999999965   445677889999999986 9999999999999999 8999999999999999999999


Q ss_pred             EEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEee
Q 019535          201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  280 (339)
Q Consensus       201 vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~  280 (339)
                      ++|+++    .+.+.++...++++|+|||++|+.. ++..+++|+++ |+++.+|... +....+++..++.|++++.|.
T Consensus        80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~~-g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeeccc-CcccCCCHHHHHHCCcEEEEE
Confidence            999765    3444444433449999999999988 99999999997 9999999864 455678888999999999997


Q ss_pred             ecCCCCCCCcHHHHHHHHhCCCCCC
Q 019535          281 LFGGLKAKSDIPILLKRYMDKELEL  305 (339)
Q Consensus       281 ~~~~~~~~~~~~~~~~~l~~g~l~~  305 (339)
                      .... ...++..++++.+ .++++|
T Consensus       153 ~~~~-~~~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         153 DSVY-CPMDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             CSSS-CCHHHHHHHHHHH-HTTTCC
T ss_pred             eCCc-CCHHHHHHHHHHH-hcccCC
Confidence            4322 2234455666666 366654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=2.3e-25  Score=180.26  Aligned_cols=165  Identities=22%  Similarity=0.331  Sum_probs=145.6

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      +++++||.++|++.|||+++ +.++++++++|+|+|+|++|++++|+++.+|+ +|++++++++++++++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999986 55899999999999999999999999999998 99999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          205 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      .+   ++..+.+++.+. +.+.++++++++..++.++++++++ |+++.+|..  .....++...++.|++++.|+..++
T Consensus        79 ~~---~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~--~~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLP--PGDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCC--SSEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEec--CCCccCCHHHHHhCCcEEEEEeecC
Confidence            88   888888887665 4666777777777799999999997 999999975  3456788889999999999987554


Q ss_pred             CCCCCcHHHHHHHHhCC
Q 019535          285 LKAKSDIPILLKRYMDK  301 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g  301 (339)
                         +++++++++++.+|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               46799999999887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.2e-25  Score=184.34  Aligned_cols=141  Identities=15%  Similarity=0.220  Sum_probs=126.4

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  203 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~  203 (339)
                      +|+++||+++++++|||+++.+..+++++++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999999999999999998889999999999976 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhh
Q 019535          204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH  272 (339)
Q Consensus       204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~  272 (339)
                      +++   +++.+++++++++ ++|++||+++++. ++.++++++++ |+++.++.... .....+...+..
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  143 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQ  143 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHH
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-CeeeecccccC-Cccccchhhhhc
Confidence            998   8999999999988 9999999999877 99999999997 99999987643 334444444444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.93  E-value=2.9e-25  Score=182.41  Aligned_cols=165  Identities=18%  Similarity=0.189  Sum_probs=140.1

Q ss_pred             ccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCC
Q 019535          131 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  209 (339)
Q Consensus       131 a~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~  209 (339)
                      ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +||++++++++.++++++|+++++++++   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4678899999999999999999999999987 8999999999999999 9999999999999999999999999988   


Q ss_pred             ccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC-----CCCcccccHHHHhhcCCeEEeeecC
Q 019535          210 KSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ-----PGSQLSLSSFEVLHSGKILMGSLFG  283 (339)
Q Consensus       210 ~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~  283 (339)
                      +++.+.+.+.+.+ ++|+|||++|++. ++.++++++++ |+++.+|...     ...+..+++..++.|++++.+++..
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            8888888887777 9999999999765 99999999997 9999998532     1223456677889999999998766


Q ss_pred             CCCC---CCcHHHHHHHHhCC
Q 019535          284 GLKA---KSDIPILLKRYMDK  301 (339)
Q Consensus       284 ~~~~---~~~~~~~~~~l~~g  301 (339)
                      .+..   .+.++++++++.+|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            5432   12356677777664

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=6.2e-25  Score=179.30  Aligned_cols=173  Identities=41%  Similarity=0.672  Sum_probs=144.3

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      ++++||+++|++.|+|+++.+.++++++++|+|+|+|++|.+++++++..|..+|+++++++++++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46889999999999999998999999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          206 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      +  ..+..+++.+.+.+ ++|++||++|....++.++.++.++ |..+.++...+.. .......++.++.++.|+..+.
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g-~~~~~~~g~~~~~-~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG-WGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCSSS-CEEECHHHHHTTCEEEECSGGG
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCC-CcceeEEEecCCc-ccCccHHHHHCCcEEEEEEEeC
Confidence            6  23455666666655 9999999999998888999988876 5554444333332 3344445566789999998888


Q ss_pred             CCCCCcHHHHHHHHhCCC
Q 019535          285 LKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~  302 (339)
                      +..++++.++++++.+|+
T Consensus       158 ~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         158 FKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence            777788999999999884

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=4.3e-24  Score=173.39  Aligned_cols=168  Identities=21%  Similarity=0.327  Sum_probs=139.7

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      +|+++||++. ++++||+++ ++.+++++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            5788999876 889999975 66889999999999999999999999999999 99999999999999999999877655


Q ss_pred             CCCC--CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeec
Q 019535          205 KNCG--DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  282 (339)
Q Consensus       205 ~~~~--~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~  282 (339)
                      +...  ..+..+.+.+..++++|++|||+|++..++.++++++++ |+++.+|...  .+..+++..++.|++++.|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC--CCCCcCHHHHHHCCCEEEEEEC
Confidence            4311  112334454444559999999999998899999999997 9999999763  3456788889999999998742


Q ss_pred             CCCCCCCcHHHHHHHHhCCC
Q 019535          283 GGLKAKSDIPILLKRYMDKE  302 (339)
Q Consensus       283 ~~~~~~~~~~~~~~~l~~g~  302 (339)
                          +.++++++++++++|+
T Consensus       155 ----~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 ----YCNDYPIALEMVASGR  170 (170)
T ss_dssp             ----CSSCHHHHHHHHHTTS
T ss_pred             ----CHHHHHHHHHHHHcCC
Confidence                2457999999999884

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.1e-24  Score=176.51  Aligned_cols=168  Identities=21%  Similarity=0.399  Sum_probs=147.4

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      +|+++||+++|++.|||+++ +..+++++++|||+|+|++|++++|+++..|+ +|++++++++++++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999976 56889999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC
Q 019535          205 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  284 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  284 (339)
                      .+   .++.+.+++.+.+.. .++++.++...++.++++++++ |+++.+|..  ..+..++...++.+++++.++..+.
T Consensus        79 ~~---~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~--~~~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGGVH-AAVVTAVSKPAFQSAYNSIRRG-GACVLVGLP--PEEMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TT---SCHHHHHHHHHSSEE-EEEESSCCHHHHHHHHHHEEEE-EEEEECCCC--SSEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---chhhhhcccccCCCc-eEEeecCCHHHHHHHHHHhccC-CceEecccc--cCCCCCCHHHHHHCCcEEEEEeeCC
Confidence            98   889999998887644 4455666677799999999997 999999975  4456788888999999999986543


Q ss_pred             CCCCCcHHHHHHHHhCCCCC
Q 019535          285 LKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       285 ~~~~~~~~~~~~~l~~g~l~  304 (339)
                         +++++++++++++|+++
T Consensus       152 ---~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 ---RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTSCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               56899999999999763

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=3.7e-25  Score=183.93  Aligned_cols=141  Identities=32%  Similarity=0.465  Sum_probs=121.6

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.+++++|.+.......+...+++.+ ...+|..
T Consensus        59 ~~~~p~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~-~~~~g~~  137 (199)
T d1cdoa1          59 KDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETR-FTCKGRK  137 (199)
T ss_dssp             TTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCC-EEETTEE
T ss_pred             ccccccccccccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccc-eeeccce
Confidence            457999999999999999999999999999999999999999999999999999877553223333333222 2246667


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                      +.+..+.|+|+||++++++.++++|+++++++++++.+++.|++.++......+.+++|||+
T Consensus       138 ~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         138 VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             eecccccCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            77788889999999999999999999999999999999999999998888888999999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=1.1e-25  Score=184.22  Aligned_cols=124  Identities=26%  Similarity=0.345  Sum_probs=110.7

Q ss_pred             ccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535           16 QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        16 ~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~   95 (339)
                      ....++|+++|||++|+|+++|++|++|++||||++.+..+|+.|..|..+++++|.+..+.  .+...+|         
T Consensus        52 ~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~G---------  120 (178)
T d1e3ja1          52 DFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDDG---------  120 (178)
T ss_dssp             SCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBCC---------
T ss_pred             cccccCCeeeccccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccce--ecccccc---------
Confidence            34557899999999999999999999999999999999999999999999999999877652  2222344         


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  161 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~  161 (339)
                                +|+||++++++.++++|+++++++++.+++++.|||+++ +.++++++++|+|+|+
T Consensus       121 ----------~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         121 ----------NLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             ----------SCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             ----------ccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence                      999999999999999999999999999999999999975 6789999999999974

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.3e-24  Score=173.67  Aligned_cols=164  Identities=20%  Similarity=0.288  Sum_probs=135.1

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  204 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~  204 (339)
                      .++..+|.+.|+..|+|+++ +.++++++++|||+|+|++|++++|+|+.+|+ ++++++++++++++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45677888999999999977 56899999999999999999999999999999 78889999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecC
Q 019535          205 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  283 (339)
Q Consensus       205 ~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~  283 (339)
                      .+   ++..     .... ++|++||++|++..++.++++++++ |+++.+|... +....++...++.|++++.|+..+
T Consensus        82 ~~---~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~l~~k~~~i~Gs~~~  151 (168)
T d1uufa2          82 RN---ADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPA-TPHKSPEVFNLIMKRRAIAGSMIG  151 (168)
T ss_dssp             TC---HHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSC
T ss_pred             ch---hhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCC-CCcccccHHHHHHCCcEEEEEeec
Confidence            87   4322     2223 8999999999887799999999997 9999999753 344466777888899999998765


Q ss_pred             CCCCCCcHHHHHHHHhCCCC
Q 019535          284 GLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       284 ~~~~~~~~~~~~~~l~~g~l  303 (339)
                      +   +++++++++++.++++
T Consensus       152 ~---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         152 G---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHcCC
Confidence            4   4678899998877643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=2.3e-24  Score=178.00  Aligned_cols=174  Identities=15%  Similarity=0.134  Sum_probs=138.6

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-cc-CHHHHHHHHHHHHcCCCEEEEEcCChh----HHHHHHhcCC
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRFGV  198 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~-G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~----~~~~~~~~ga  198 (339)
                      +|+++||+++++++|||+++.+..+++++++++|+ |+ |++|++++|+||.+|+ +||+++++++    +.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58899999999999999999999999999999998 55 8999999999999999 8888876543    4556788999


Q ss_pred             ceEEeCCCCCCccHHHHHHHhc---CCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCC
Q 019535          199 TEFVNSKNCGDKSVSQIIIDMT---DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  275 (339)
Q Consensus       199 ~~vi~~~~~~~~~~~~~l~~~~---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  275 (339)
                      ++++++++....++.+.+++.+   ++++|++||++|++. ++.++++|+++ |+++.+|... +.+..++...++.|++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGMS-FQPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCCS-SCCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECCcc-CCCccCcHHHHHHCCc
Confidence            9999875422245555666543   348999999999887 89999999997 9999999753 4556788888889999


Q ss_pred             eEEeeecCCCCC------CCcHHHHHHHHhCCC
Q 019535          276 ILMGSLFGGLKA------KSDIPILLKRYMDKE  302 (339)
Q Consensus       276 ~i~~~~~~~~~~------~~~~~~~~~~l~~g~  302 (339)
                      ++.|+++..+..      ++.+.++++++++|+
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999986543211      133566777777663

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=1.8e-24  Score=175.35  Aligned_cols=118  Identities=27%  Similarity=0.454  Sum_probs=108.1

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ..+.+|.++|||++|+|+++|+++++|++||||++.+..+|+.|..|+.+.+++|.+..+   .|+..+|          
T Consensus        53 ~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G----------  119 (171)
T d1h2ba1          53 LQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG----------  119 (171)
T ss_dssp             HCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC----------
T ss_pred             cCCccccccceeeeeeeecccCCCCcCCCCCEEEEcCccCCCCccccccccccccccccc---ceeeccc----------
Confidence            356899999999999999999999999999999999999999999999999999988775   6777766          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEE
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  158 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI  158 (339)
                               +|+||+.++++.++++|++++++.++++.+++.|||+++ +...+ .|++|||
T Consensus       120 ---------~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         120 ---------GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             ---------SSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             ---------ccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence                     999999999999999999999998888888999999976 55777 8999998

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=1.1e-24  Score=176.84  Aligned_cols=147  Identities=20%  Similarity=0.327  Sum_probs=122.5

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  203 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~  203 (339)
                      +++++||++++++.|||+++. ..+++++++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            588999999999999999875 589999999999986 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeec
Q 019535          204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  282 (339)
Q Consensus       204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~  282 (339)
                      +.+        ..++.+.+ ++|+||||+|. . ++.++++++++ |+++.+|... +....+++..++.|++++.+++.
T Consensus        79 ~~~--------~~~~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~-G~~v~~G~~~-g~~~~~~~~~~~~k~~~i~g~~~  146 (171)
T d1iz0a2          79 YAE--------VPERAKAWGGLDLVLEVRGK-E-VEESLGLLAHG-GRLVYIGAAE-GEVAPIPPLRLMRRNLAVLGFWL  146 (171)
T ss_dssp             GGG--------HHHHHHHTTSEEEEEECSCT-T-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCH
T ss_pred             hhh--------hhhhhhccccccccccccch-h-HHHHHHHHhcC-CcEEEEeCCC-CCCCCccHHHHHHCCcEEEEEeC
Confidence            755        23344445 99999999883 4 78999999997 9999999753 34556777888999999999876


Q ss_pred             CCC
Q 019535          283 GGL  285 (339)
Q Consensus       283 ~~~  285 (339)
                      ..+
T Consensus       147 ~~~  149 (171)
T d1iz0a2         147 TPL  149 (171)
T ss_dssp             HHH
T ss_pred             cCh
Confidence            543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.3e-24  Score=176.15  Aligned_cols=165  Identities=19%  Similarity=0.205  Sum_probs=137.5

Q ss_pred             CccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          126 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       126 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      +++.||.+.|+..|+|+++. ..+++++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~-~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            45678899999999999764 6899999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEEcCCCHH--HHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecC
Q 019535          206 NCGDKSVSQIIIDMTDGGADYCFECVGLAS--LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  283 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~  283 (339)
                      +  ..++.+    ...+++|+++||+++..  .++.++++++++ |+++.+|...  ....++...++.|++++.|+..+
T Consensus        80 ~--~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPE--QHEMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCC--SSCCEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEecccc--ccccccHHHHHhCCcEEEEEeeC
Confidence            5  133322    23348999999987643  367889999997 9999999754  33456667788899999998766


Q ss_pred             CCCCCCcHHHHHHHHhCCCCC
Q 019535          284 GLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       284 ~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      +   +++++++++++.+|+++
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            5   46899999999999763

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=6.9e-24  Score=175.11  Aligned_cols=139  Identities=25%  Similarity=0.427  Sum_probs=107.6

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCc-ccccccCCce
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT-SRFKDLRGET   97 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~-~~~~~~~~~~   97 (339)
                      .++|+|+|||++|+|+++|++|++|++||||+.. +.+|++|.+|+.+.+++|++.......|...+|. ..+....+..
T Consensus        54 ~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~  132 (194)
T d1f8fa1          54 VPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVV  132 (194)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------C
T ss_pred             ccCCcccccceEEEeeecCccceeEccCceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceee
Confidence            4799999999999999999999999999999554 5589999999999999998752211244444442 2223334445


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  177 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~  177 (339)
                      ..++++.|+|+||+++++..++++|++++++++                         +++.|+|++|++++|+++.+|+
T Consensus       133 ~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~  187 (194)
T d1f8fa1         133 NDHFFAQSSFATYALSRENNTVKVTKDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITL  187 (194)
T ss_dssp             BCCGGGTCCSBSEEEEEGGGEEEECTTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCS
T ss_pred             ccccccccccceeEEEehHHEEECCCCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCC
Confidence            566777789999999999999999999876543                         3456789999999999999999


Q ss_pred             CEEEEE
Q 019535          178 TRIIGV  183 (339)
Q Consensus       178 ~~Vi~~  183 (339)
                      ++|+++
T Consensus       188 ~~iiaV  193 (194)
T d1f8fa1         188 KPIIKI  193 (194)
T ss_dssp             EEEEEC
T ss_pred             CEEEEe
Confidence            666664

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=1.6e-22  Score=167.15  Aligned_cols=166  Identities=25%  Similarity=0.238  Sum_probs=137.4

Q ss_pred             cccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCC
Q 019535          128 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  207 (339)
Q Consensus       128 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~  207 (339)
                      ++.+.+..+++|||+++ +.+++++|++|||+|+|++|++++++|+..|+++|++++.++++++.++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            35566788999999985 6799999999999999999999999999999989999999999999999999999999888 


Q ss_pred             CCccHHHHHHHhcCC-CccEEEEcCCC---------------HHHHHHHHHHhhcCCcEEEEeccCCCCCc---------
Q 019535          208 GDKSVSQIIIDMTDG-GADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVDQPGSQ---------  262 (339)
Q Consensus       208 ~~~~~~~~l~~~~~g-~~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~~~~---------  262 (339)
                        +++.+.+++++++ ++|++||++|.               +..++.++++++++ |+++.+|...+..+         
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              8999999999988 99999999984               35699999999997 99999997543222         


Q ss_pred             --ccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC
Q 019535          263 --LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK  301 (339)
Q Consensus       263 --~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g  301 (339)
                        ..++...++.|++++.+   +..+.+..+.++++++.++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~  194 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWD  194 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTT
T ss_pred             CceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcC
Confidence              23444556777887753   2333334467788887765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=3.1e-23  Score=170.70  Aligned_cols=172  Identities=17%  Similarity=0.162  Sum_probs=131.1

Q ss_pred             CCccccccccchhhhhhHHHHHhcCCCCC--CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce
Q 019535          125 VPPNRACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE  200 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~--~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~  200 (339)
                      +|+.+.| +++++.|||+++.+..+++++  ++|||+|+ |++|++++|+||.+|+++|++++.++++...+ +++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4555544 677899999999999999887  89999986 99999999999999997788777776665544 5799999


Q ss_pred             EEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC--------CCcccccHHHHhh
Q 019535          201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP--------GSQLSLSSFEVLH  272 (339)
Q Consensus       201 vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~--------~~~~~~~~~~~~~  272 (339)
                      ++|+.+   +++.+.+++.++.++|+|||++|++. ++..+++++++ |+++.+|...+        ..........+..
T Consensus        81 vi~~~~---~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          81 AVNYKT---GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEETTS---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             Eeeccc---hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999999   89999999998779999999999876 99999999997 99999986432        1111111233566


Q ss_pred             cCCeEEeeecCCCCC--CCcHHHHHHHHhCCC
Q 019535          273 SGKILMGSLFGGLKA--KSDIPILLKRYMDKE  302 (339)
Q Consensus       273 ~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~  302 (339)
                      |++++.++.+..+..  .+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            899999876544322  123566777777664

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-23  Score=170.58  Aligned_cols=120  Identities=24%  Similarity=0.289  Sum_probs=103.5

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~   96 (339)
                      ..++|+++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.+++++|....+   +|.. .+|          
T Consensus        60 ~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~G----------  126 (185)
T d1pl8a1          60 IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG----------  126 (185)
T ss_dssp             ECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC----------
T ss_pred             CCCCCeeeeeeeeeeEEEeccceeeecccccceecceeccccchhhccchhchhcccee---eecccccc----------
Confidence            45789999999999999999999999999999999999999999999999999988775   4433 334          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCH
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS  163 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~  163 (339)
                               +|+||+++++++++++|++++++++++++  +.+|+++ ++.++++.+++||| |+|+
T Consensus       127 ---------~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         127 ---------NLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             ---------SCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             ---------cceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence                     99999999999999999999999987654  5667775 45678899999998 5553

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=5.9e-23  Score=169.95  Aligned_cols=142  Identities=36%  Similarity=0.513  Sum_probs=117.0

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ....+|.++|||++|+|+++|++|+++++||||++.+..+|+.|..|+.+++++|.+.......+...+...++. .+|.
T Consensus        56 ~~~~~p~v~GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~-~~g~  134 (197)
T d2fzwa1          56 PEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGK  134 (197)
T ss_dssp             TTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTE
T ss_pred             ccccccccCCcceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceec-cCCc
Confidence            345799999999999999999999999999999999999999999999999999987543212233333322221 3466


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                      .+.++.++|+|+||+++++..++++|+++++++++.+++++.|++.++......+.+++|||+
T Consensus       135 ~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         135 TILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEBCCTTTCCSBSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             ceecccccccceeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            677777889999999999999999999999999999999999999987555555678888874

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.86  E-value=4.6e-22  Score=165.62  Aligned_cols=136  Identities=37%  Similarity=0.565  Sum_probs=113.3

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-------CCCcccc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-------RDQTSRF   90 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-------~~g~~~~   90 (339)
                      +..+|.++|||++|+|+++|++|+++++||||++.+...|+.|.+|+.+.+++|.+...   +++.       .++..++
T Consensus        58 ~~~~P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~---~~~~~~~~~~~~~~~~~~  134 (202)
T d1e3ia1          58 KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN---FKYPTIDQELMEDRTSRF  134 (202)
T ss_dssp             CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCC---SSCGGGSSCSCTTSCCSE
T ss_pred             ccccccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccc---cccCccceeccccccccc
Confidence            35789999999999999999999999999999999999999999999999999987764   3322       1111122


Q ss_pred             cccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc
Q 019535           91 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  160 (339)
Q Consensus        91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G  160 (339)
                       ..+|.++.+..+.|+|+||++++++.++++|++++++.++++.+++.+++.++..   +++|++|.|+.
T Consensus       135 -~~~g~~v~~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         135 -TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             -EETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             -ccCceeeecccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence             2467778888888999999999999999999999999988888888888876532   46788887763

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=3.2e-22  Score=164.49  Aligned_cols=122  Identities=20%  Similarity=0.326  Sum_probs=101.5

Q ss_pred             CCCCCcccCCceeEEEEEecCCC-CCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCC----CCCCCCCCCccccc
Q 019535           18 RAVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFK----ISPWMPRDQTSRFK   91 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~----~~~g~~~~g~~~~~   91 (339)
                      ..++|+++|||++|+|+++|+++ +.+++||||++.+. ..|+.|.+|+.+.+++|......    ...|+..+      
T Consensus        59 ~~~~P~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~------  132 (192)
T d1piwa1          59 NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ------  132 (192)
T ss_dssp             CCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC------
T ss_pred             CCCCCcCcccccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccc------
Confidence            45789999999999999999988 56999999977665 48999999999999999876532    01122233      


Q ss_pred             ccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           92 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                                   |+|+||++++++.++++|++++++.|+.+.+.+.|||+++ +.++++.+++|||.
T Consensus       133 -------------Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         133 -------------GGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             -------------CSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             -------------cceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence                         3999999999999999999999998877765678999966 67899999999875

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=5.2e-22  Score=161.60  Aligned_cols=119  Identities=25%  Similarity=0.316  Sum_probs=103.8

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~   95 (339)
                      ....+|.++|||++|+|+++|++|++|++||||+..+. ..|+.|.+|+.+++++|.....   +|+..+|         
T Consensus        56 ~~~~~P~i~GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g---------  123 (175)
T d1llua1          56 VKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG---------  123 (175)
T ss_dssp             SCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC---------
T ss_pred             ccccCCcCCCCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccc---ccccccc---------
Confidence            44579999999999999999999999999999987654 5899999999999999988764   6777666         


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                                +|+||+++++++++++|++++++.++++.+++.|+++++ + ++..+|++|||+
T Consensus       124 ----------g~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         124 ----------GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             ----------SSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             ----------ccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence                      999999999999999999999998888888999998854 3 344579999985

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=1.5e-24  Score=179.97  Aligned_cols=142  Identities=20%  Similarity=0.240  Sum_probs=108.9

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|+++|||++|+|+++|++|++|++||||++.+..+|+.|..|+.++++.|.........+..  |....++.     
T Consensus        58 ~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~--g~~~~~~~-----  130 (201)
T d1kola1          58 AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAY--GYVDMGDW-----  130 (201)
T ss_dssp             CCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEB--TCTTSCCB-----
T ss_pred             cccceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccc--cccCCCcc-----
Confidence            47899999999999999999999999999999999999999999999999999776432111111  10011111     


Q ss_pred             ecccccccccceEEeec--cceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535           99 HHFVSVSSFSEYTVLDI--AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  176 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G  176 (339)
                           .|+|+||+++|.  ..++++|++.++.+++.+..++.++++++ ...+.+.+    ++|+|++|++++|.||.+|
T Consensus       131 -----~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~G  200 (201)
T d1kola1         131 -----TGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFS  200 (201)
T ss_dssp             -----CCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSC
T ss_pred             -----ccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcC
Confidence                 249999999975  47999999877777777777888888864 33343333    3588999999999999988


Q ss_pred             C
Q 019535          177 A  177 (339)
Q Consensus       177 ~  177 (339)
                      +
T Consensus       201 A  201 (201)
T d1kola1         201 A  201 (201)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.9e-22  Score=161.81  Aligned_cols=149  Identities=15%  Similarity=0.144  Sum_probs=123.8

Q ss_pred             CCccccccccchhhhhhHHHH---HhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce
Q 019535          125 VPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  200 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~---~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~  200 (339)
                      +|+.+|+.+++++.|||+++.   +......+++|||+|+ |++|.+++|+||.+|+ +|+++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578899999999999998653   3333445679999976 9999999999999999 8999999999999999999999


Q ss_pred             EEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEee
Q 019535          201 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  280 (339)
Q Consensus       201 vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~  280 (339)
                      ++++++   .++.+   .+....+|.++|+++++. +...+++++++ |+++.+|... +....++...++.|++++.|+
T Consensus        80 vi~~~~---~~~~~---~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~~-~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLAG-GFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTT-CSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeecccC-CccccccHHHHHHCCCeEEEE
Confidence            999877   44322   222336899999999887 99999999997 9999999764 445667788888999999997


Q ss_pred             ecC
Q 019535          281 LFG  283 (339)
Q Consensus       281 ~~~  283 (339)
                      ...
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            544

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.85  E-value=1.3e-23  Score=170.72  Aligned_cols=120  Identities=18%  Similarity=0.145  Sum_probs=95.2

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|+++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.++++.|........+|...+|            
T Consensus        51 ~~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G------------  118 (177)
T d1jqba1          51 DRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG------------  118 (177)
T ss_dssp             CCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC------------
T ss_pred             CCCCccCcceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCCh------------
Confidence            47899999999999999999999999999999999999999999999999999876543223433444            


Q ss_pred             ecccccccccceEEeec--cceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHH
Q 019535           99 HHFVSVSSFSEYTVLDI--AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  168 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a  168 (339)
                             +|+||+++|.  ..++++|+++++++++...+   +++.++        ++.+||+|+|++|+++
T Consensus       119 -------~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~---~~~~~~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         119 -------VFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             -------SSBSSEEESSHHHHCEECCTTSCGGGGEEEEE---ESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred             -------hcCeeEEEEhhhCeEEECCCCcchHHHHHHHH---HHHHHh--------cCceEEECCCHHHhhe
Confidence                   9999999986  46899999999887765332   233222        2347777888777654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.84  E-value=6.7e-22  Score=158.89  Aligned_cols=154  Identities=14%  Similarity=0.123  Sum_probs=120.5

Q ss_pred             chhhhhhHH---HHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCc
Q 019535          135 CGVSTGVGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  210 (339)
Q Consensus       135 ~~~~ta~~a---l~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~  210 (339)
                      ++..|||.+   |.+.....++++|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|+++++++++    
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----   77 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----
Confidence            356677754   445555667889999986 9999999999999999 8999999999999999999999998654    


Q ss_pred             cHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCC
Q 019535          211 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS  289 (339)
Q Consensus       211 ~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  289 (339)
                      ...+. ...+.+ ++|+|||++|++. ++.++++|+++ |+++.+|... +...+++...++.|+++++|......+ .+
T Consensus        78 ~~~~~-~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~~-g~~~~~~~~~l~~k~~~i~G~~~~~~~-~~  152 (167)
T d1tt7a2          78 VYDGT-LKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVSLLGIDSVYCP-MD  152 (167)
T ss_dssp             HCSSC-CCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCEEEECCSSSCC-HH
T ss_pred             hhchh-hhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeeccC-CCcccCCHHHHHHCCcEEEEEecCCCC-HH
Confidence            11222 233444 9999999999988 99999999997 9999999875 456778888899999999997533221 23


Q ss_pred             cHHHHHHHH
Q 019535          290 DIPILLKRY  298 (339)
Q Consensus       290 ~~~~~~~~l  298 (339)
                      ...++.+.+
T Consensus       153 ~~~~~~~~l  161 (167)
T d1tt7a2         153 VRAAVWERM  161 (167)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            344555555

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.83  E-value=2.2e-21  Score=160.57  Aligned_cols=137  Identities=36%  Similarity=0.600  Sum_probs=106.0

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      ..+|.++|||++|+|+++|++++++++||||++.+..+|+.|.+|+.+.+++|+...+....|...++..++. .++..+
T Consensus        59 ~~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~~~~~  137 (198)
T d1p0fa1          59 SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPI  137 (198)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEE
T ss_pred             cccccccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEe-eCCeec
Confidence            4789999999999999999999999999999999999999999999999999998776433333333332322 334445


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHH
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL  166 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~  166 (339)
                      +...+.|+|+||+.+++..++++|++++++.++...+.+.+          +.++++|||.|+|++|+
T Consensus       138 ~~~~~~g~faey~~v~~~~~~kip~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         138 YNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             BCSTTTCCSBSEEEEETTSEEEECTTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             cccCCCccceeeEEecHHHEEECCCCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            55556789999999999999999999998776654443332          22344577888887765

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.83  E-value=5.8e-21  Score=155.60  Aligned_cols=118  Identities=23%  Similarity=0.368  Sum_probs=96.8

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ...++|+|+|||++|+|+++|+++++|++||||++.+..+|+.|..|+.+++++|.+..+   +|+..+|          
T Consensus        58 ~~~~~P~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G----------  124 (177)
T d1jvba1          58 LGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG----------  124 (177)
T ss_dssp             TCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC----------
T ss_pred             cccCCCccccceEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcce---eeecccc----------
Confidence            345899999999999999999999999999999999999999999999999999998775   6777666          


Q ss_pred             eeecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEE
Q 019535           97 TIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  158 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI  158 (339)
                               +|+||++++.. .+.++|+..+.+.|+....++.++++++ ..+++ .|++|||
T Consensus       125 ---------~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         125 ---------AYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             ---------SSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             ---------ccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence                     99999999765 4666665554444444455888888865 55665 5889987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.81  E-value=2.8e-20  Score=150.68  Aligned_cols=119  Identities=25%  Similarity=0.364  Sum_probs=99.4

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG   95 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~   95 (339)
                      ....+|.++|||++|+|+++|++++++++||||++.+. ..|+.|..|..+..++|.....   .|+..+|         
T Consensus        51 ~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G---------  118 (171)
T d1rjwa1          51 VKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG---------  118 (171)
T ss_dssp             SCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC---------
T ss_pred             cccccccccCCEEEEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccc---cceeccC---------
Confidence            45589999999999999999999999999999987665 4788999999999999988764   6666666         


Q ss_pred             ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc
Q 019535           96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  161 (339)
Q Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~  161 (339)
                                +|+||+++++++++++|++++++.|+ +. .+.++++++. ...+ +|++|||+|.
T Consensus       119 ----------~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         119 ----------GYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             ----------SSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             ----------ccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence                      99999999999999999999987665 44 4566776543 3445 5999999984

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.81  E-value=7.8e-20  Score=151.39  Aligned_cols=138  Identities=33%  Similarity=0.502  Sum_probs=107.1

Q ss_pred             CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535           19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI   98 (339)
Q Consensus        19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~   98 (339)
                      .++|.++|||++|+|+++|++++++++||||++.+..+|+.|.+|+.+.+++|......-..|...++. .....+|..+
T Consensus        59 ~~~P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~-~~~~~~g~~~  137 (198)
T d2jhfa1          59 TPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGT-SRFTCRGKPI  137 (198)
T ss_dssp             CCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSC-CSEEETTEEE
T ss_pred             cccceecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCcc-ccccccCcee
Confidence            468999999999999999999999999999999999999999999999999999876532222222221 1122566677


Q ss_pred             ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc
Q 019535           99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  160 (339)
Q Consensus        99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G  160 (339)
                      .+..+.|+|+||+++++..++++|+.++++.++...+++.+...+   ...+++|++|+|+.
T Consensus       138 ~~~~~~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         138 HHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTIL  196 (198)
T ss_dssp             BCSTTTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEEE
T ss_pred             ccCCCCCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEEE
Confidence            777788999999999999999999999987766655454443332   12356788888763

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=2.3e-20  Score=152.01  Aligned_cols=121  Identities=26%  Similarity=0.393  Sum_probs=94.9

Q ss_pred             CCCCCcccCCceeEEEEEecCCCC-----CcCCCCEEeeccCCCCCCCccccCCCC-CCCCCCCCCCCCCCCCCCccccc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVD-----GVVEGDVVIPHFLADCTECVGCRSKKG-NLCSAFPFKISPWMPRDQTSRFK   91 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~-----~~~~Gd~V~~~~~~~~~~~~~c~~~~~-~~c~~~~~~~~~g~~~~g~~~~~   91 (339)
                      ..++|+++|||++|+|+++|++|+     ++++||+|++.+..+|+.|.+|+.+++ +.|.+...   +|+... ..+++
T Consensus        55 ~~~~P~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~~~-~~~~~  130 (184)
T d1vj0a1          55 RVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRG-CSEYP  130 (184)
T ss_dssp             TCCSSBCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCC-SSSTT
T ss_pred             ccccccccceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCcee---eccCCC-CCCCC
Confidence            347999999999999999999986     468999999999999999999999985 56876553   554321 11122


Q ss_pred             ccCCceeecccccccccceEEee-ccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           92 DLRGETIHHFVSVSSFSEYTVLD-IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        92 ~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                      +.+          |+|+||++++ +++++++|++++.++      ++++|++++ +++++++|++|||+
T Consensus       131 ~~~----------Gg~ae~~~v~~~~~v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         131 HLR----------GCYSSHIVLDPETDVLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             CCC----------SSSBSEEEECTTCCEEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             Ccc----------eeCcCcEEechhHcEEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            222          3999999996 579999999998753      355677754 67889999999997

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.2e-18  Score=135.99  Aligned_cols=95  Identities=18%  Similarity=0.301  Sum_probs=85.1

Q ss_pred             cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      .+..+|.++|||++|+|+++|+++++|++||||+..+.                             .+           
T Consensus        56 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-----------   95 (150)
T d1yb5a1          56 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSST-----------------------------IS-----------   95 (150)
T ss_dssp             CCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCC-----------------------------SS-----------
T ss_pred             ccccccccCccceeeeeEeecceeeccccCcccccccc-----------------------------cc-----------
Confidence            45688999999999999999999999999999965321                             12           


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                              |+|+||+.++++.++++|+++++++||+++++..|+|+++........|+++||+
T Consensus        96 --------G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          96 --------GGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             --------CSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             --------ccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence                    3999999999999999999999999999999999999998888899999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=5.4e-18  Score=137.46  Aligned_cols=116  Identities=20%  Similarity=0.306  Sum_probs=84.5

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE   96 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~   96 (339)
                      ...+|+|+|||++|+|+++|++|+++++||+|.+.+ ..+|+.|++|+.+.+++|.+.... ..+.....          
T Consensus        51 ~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~----------  119 (179)
T d1uufa1          51 GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPTPDE----------  119 (179)
T ss_dssp             CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCSST----------
T ss_pred             cccccccccccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCcccc-ccccCCCC----------
Confidence            357899999999999999999999999999997665 459999999999999999876421 01111000          


Q ss_pred             eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCC
Q 019535           97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE  151 (339)
Q Consensus        97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~  151 (339)
                         .....|+|+||+++++++++++|+.....  +.. .++.++++++ .++.++
T Consensus       120 ---~~~~~GgfaEy~~v~~~~~~~ip~~~~~~--~~a-~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         120 ---PGHTLGGYSQQIVVHERYVLRIRVADIEM--IRA-DQINEAYERM-LRGDVK  167 (179)
T ss_dssp             ---TSBCCCSSBSEEEEEGGGCEECCCCCEEE--ECG-GGHHHHHHHH-HTTCSS
T ss_pred             ---CcccccccceEEEechHHEEECCCCCcCh--hHh-chhHHHHHHH-HHhCcc
Confidence               01112499999999999999999654322  222 2667888865 335553

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=1.2e-16  Score=125.50  Aligned_cols=92  Identities=20%  Similarity=0.235  Sum_probs=75.8

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ...+|.++|||++|+|+++|++|++|++||||+...                             ...            
T Consensus        53 ~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~-----------------------------~~~------------   91 (147)
T d1qora1          53 PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQ-----------------------------SAL------------   91 (147)
T ss_dssp             CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESC-----------------------------CSS------------
T ss_pred             CCcceeeeccccccceeeeeeecccccccceeeeec-----------------------------ccc------------
Confidence            457999999999999999999999999999995311                             112            


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccc--cccchhhhhhHHHHHhcCCCCCCEEEE
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC--LLSCGVSTGVGAAWRTANVEVGSTVVI  158 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa--~l~~~~~ta~~al~~~~~~~~~~~VLI  158 (339)
                             |+|+||++++.+.++++|++++++.++  ++++...|+++++++ .++++|++|||
T Consensus        92 -------G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          92 -------GAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             -------CCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             -------ccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence                   389999999999999999999987554  456666777776655 67899999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.59  E-value=1.4e-15  Score=120.01  Aligned_cols=99  Identities=22%  Similarity=0.169  Sum_probs=80.2

Q ss_pred             cccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccC
Q 019535           15 IQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR   94 (339)
Q Consensus        15 ~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~   94 (339)
                      +.....+|+++|||++|+|++  ..++.|++||+|....+                        ..+...+|        
T Consensus        54 ~~~~~~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~------------------------~~~~~~~G--------   99 (152)
T d1xa0a1          54 GKIVKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGY------------------------EIGVTHFG--------   99 (152)
T ss_dssp             GSSCCSSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEEST------------------------TBTTTBCC--------
T ss_pred             ccccccccceeeeeeeeeeec--cCCCccccCCEEEEecC------------------------ccccccCC--------
Confidence            344568999999999999999  44678999999965422                        02222333        


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  160 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G  160 (339)
                                 +|+||+.++++.++++|++++ .+||+++++..|++.++....+++ |++|||+|
T Consensus       100 -----------~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         100 -----------GYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             -----------SSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             -----------CcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence                       999999999999999999998 468888889999988888888886 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=1.5e-15  Score=116.21  Aligned_cols=83  Identities=19%  Similarity=0.200  Sum_probs=70.2

Q ss_pred             cccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccC
Q 019535           15 IQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR   94 (339)
Q Consensus        15 ~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~   94 (339)
                      ++.+..+|+++|||++|+|           +||+|....                              .+|        
T Consensus        49 ~~~~~~~P~v~G~E~~G~V-----------vGd~V~~~~------------------------------~~G--------   79 (131)
T d1iz0a1          49 YLTRLHPPFIPGMEVVGVV-----------EGRRYAALV------------------------------PQG--------   79 (131)
T ss_dssp             SSSCCCSSBCCCCEEEEEE-----------TTEEEEEEC------------------------------SSC--------
T ss_pred             ccccccceeEeeeeeEEee-----------ccceEEEEe------------------------------ccC--------
Confidence            4455689999999999999           399995422                              223        


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  159 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~  159 (339)
                                 +|+||+.++++.++++|+++++++||++++++.|||+++.++++  .+++||++
T Consensus        80 -----------~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g~--~g~tvl~l  131 (131)
T d1iz0a1          80 -----------GLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGH--TGKVVVRL  131 (131)
T ss_dssp             -----------CSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTTC--CBEEEEEC
T ss_pred             -----------ccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhccc--CCCEEEEC
Confidence                       99999999999999999999999999999999999999877664  48888863

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=2e-14  Score=98.13  Aligned_cols=73  Identities=15%  Similarity=0.192  Sum_probs=65.4

Q ss_pred             CCccccccccchhhhhhHHHH---HhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535          125 VPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  198 (339)
Q Consensus       125 ~~~~~aa~l~~~~~ta~~al~---~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga  198 (339)
                      +|+++|+.+++++.|||.++.   +....+++++|||+|+ |++|.+++|+++.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999988754   4455689999999976 9999999999999999 89999999999999999985

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=1.4e-13  Score=107.17  Aligned_cols=83  Identities=13%  Similarity=0.018  Sum_probs=68.7

Q ss_pred             cccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccC
Q 019535           15 IQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR   94 (339)
Q Consensus        15 ~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~   94 (339)
                      +.....+|.++|+|++|+|+++|.+  .+++||+|++...                        ..|...+|        
T Consensus        51 ~~~~~~~p~v~G~e~~G~V~~~~~~--~~~~g~~v~~~~~------------------------~~g~~~~G--------   96 (146)
T d1o89a1          51 GKIIRNFPMIPGIDFAGTVRTSEDP--RFHAGQEVLLTGW------------------------GVGENHWG--------   96 (146)
T ss_dssp             SSCCCSSSBCCCSEEEEEEEEECST--TCCTTCEEEEECT------------------------TBTTTBCC--------
T ss_pred             cccccccceeccccccccceeeccC--CccceeeEEeecc------------------------cceecCCC--------
Confidence            3455689999999999999998774  7999999976432                        13333444        


Q ss_pred             CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhH
Q 019535           95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG  142 (339)
Q Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  142 (339)
                                 +|+||+++|++.++++|+++|+++||++++++.||+.
T Consensus        97 -----------~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~  133 (146)
T d1o89a1          97 -----------GLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAI  133 (146)
T ss_dssp             -----------SSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHH
T ss_pred             -----------cceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHH
Confidence                       9999999999999999999999999999988888854

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.40  E-value=6.7e-15  Score=117.26  Aligned_cols=98  Identities=21%  Similarity=0.195  Sum_probs=78.4

Q ss_pred             CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535           18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET   97 (339)
Q Consensus        18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~   97 (339)
                      ....|.++|+|++|+|++.  .+.++++||+|...+.                        ..|+..+|           
T Consensus        57 ~~~~~~~~g~e~~G~v~~~--~~~~~~~g~~v~~~~~------------------------~~g~~~~G-----------   99 (162)
T d1tt7a1          57 VREYPLILGIDAAGTVVSS--NDPRFAEGDEVIATSY------------------------ELGVSRDG-----------   99 (162)
T ss_dssp             CSSCSEECCSEEEEEEEEC--SSTTCCTTCEEEEEST------------------------TBTTTBCC-----------
T ss_pred             cccceeeeeeecccccccc--cccccccceeeEeeec------------------------cceecccc-----------
Confidence            4577899999999999984  4668999999975432                        13444444           


Q ss_pred             eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc
Q 019535           98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  161 (339)
Q Consensus        98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~  161 (339)
                              +|+||+++|++.++++|+++++++||.+++..+|||.++.. .+...+++|||.|+
T Consensus       100 --------~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         100 --------GLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRI  154 (162)
T ss_dssp             --------SSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCC
T ss_pred             --------ccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECC
Confidence                    99999999999999999999999999999999999986443 33455577777765

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.31  E-value=8.3e-15  Score=118.35  Aligned_cols=101  Identities=16%  Similarity=0.087  Sum_probs=82.4

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ..|.++|+|++|+|+++|.++..++.||+|.....                             ..              
T Consensus        71 ~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------~~--------------  107 (175)
T d1gu7a1          71 EPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF--------------  107 (175)
T ss_dssp             SCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC--------------
T ss_pred             CCCcccccccccccccccccccccccccceecccc-----------------------------cc--------------
Confidence            68899999999999999999999999999964321                             12              


Q ss_pred             cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH-hcCCCCCCEEEEEc-c-CHHHHHHHH
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFG-L-GSIGLAVAE  170 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~-~~~~~~~~~VLI~G-~-G~iG~~a~~  170 (339)
                           |+|+||+++++++++++|++++.+.++  .+...|||+++.. ..+++++++|||.| + |++|++++|
T Consensus       108 -----g~~aey~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         108 -----GTWRTHALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             -----CCSBSEEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             -----ccccceeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence                 389999999999999999987644443  4577888887664 45799999999997 4 679988765

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.58  E-value=1.3e-07  Score=72.58  Aligned_cols=83  Identities=12%  Similarity=0.106  Sum_probs=60.3

Q ss_pred             CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535           20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH   99 (339)
Q Consensus        20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~   99 (339)
                      ....++..+.+|+|++  ++.++|++||+|+..                                               
T Consensus        58 ~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~-----------------------------------------------   88 (147)
T d1v3va1          58 KEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQ-----------------------------------------------   88 (147)
T ss_dssp             CTTSBCCCCEEEEEEE--ESCTTSCTTCEEEEC-----------------------------------------------
T ss_pred             ccCCccccceEEEEEE--eCCCcccCCCEEEEc-----------------------------------------------
Confidence            3444566689999998  667899999999531                                               


Q ss_pred             cccccccccceEEeeccceEEcCCCCCcc-----ccccccchhhhh-hHHHHHhcCCCCCCEEEE
Q 019535          100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPN-----RACLLSCGVSTG-VGAAWRTANVEVGSTVVI  158 (339)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~-----~aa~l~~~~~ta-~~al~~~~~~~~~~~VLI  158 (339)
                           ++|+||.+++.+.+.++|+.++..     ..+++....+|| |..+..  ..+.|++|++
T Consensus        89 -----~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~  146 (147)
T d1v3va1          89 -----SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT  146 (147)
T ss_dssp             -----CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred             -----cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence                 289999999999999998765432     344566677775 434543  3467999886

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.10  E-value=6.4e-06  Score=63.54  Aligned_cols=99  Identities=23%  Similarity=0.254  Sum_probs=75.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ++.+|+|+|+|..|+.|++.|+.+|+ .|.+.+.+.++++.++....  ...+..++   +.+.+.+.+     +|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~~-----aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVAE-----ADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHHT-----CSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhcc-----CcEEEE
Confidence            46789999999999999999999999 99999999999999877432  22232222   344444443     799998


Q ss_pred             cCCCH------HHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          230 CVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       230 ~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      ++--+      ...++.++.|+++ ..+|++....++
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqGG  137 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGG  137 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCC
T ss_pred             eeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCCC
Confidence            77321      2267899999998 999999876544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.98  E-value=7.2e-06  Score=64.17  Aligned_cols=106  Identities=21%  Similarity=0.256  Sum_probs=75.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEe----CCCCC-------------CccHHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN----SKNCG-------------DKSVSQ  214 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~----~~~~~-------------~~~~~~  214 (339)
                      ++.+|+|+|+|..|+.|++.|+.+|+ .|.+.+.++++++.+++++...+-.    ....+             .....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45789999999999999999999999 9999999999999999988644310    00000             001112


Q ss_pred             HHHHhcCCCccEEEEcCC---CH---HHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535          215 IIIDMTDGGADYCFECVG---LA---SLVQEAYACCRKGWGKTIVLGVDQPG  260 (339)
Q Consensus       215 ~l~~~~~g~~d~v~d~~g---~~---~~~~~~~~~l~~~~G~~v~~g~~~~~  260 (339)
                      .+.+... ..|+||-++-   ..   ...+.+++.|+++ ..+|++....++
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqGG  156 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTC
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCCC
Confidence            2322222 5899998662   21   2367899999998 999999876554

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.76  E-value=1.4e-05  Score=64.96  Aligned_cols=110  Identities=21%  Similarity=0.254  Sum_probs=77.4

Q ss_pred             ccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCC
Q 019535          133 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCG  208 (339)
Q Consensus       133 l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~  208 (339)
                      +..+...|.  +.+.++++++++||.+|+|. |..++.+++..|. +|++++.+++-.+.++    ++|...+.....  
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--  134 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG--  134 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence            343555554  56788999999999999874 8888999988886 8999999887666554    467554432222  


Q ss_pred             CccHHHHHHHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          209 DKSVSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       209 ~~~~~~~l~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                        +..+   -+.. +.||.|+-+.+-...-+.+++.|+++ |+++..
T Consensus       135 --d~~~---g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         135 --DGSK---GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             --CGGG---CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             --cccc---CCcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence              1111   1122 38999997666555467889999998 999875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.65  E-value=0.00012  Score=56.97  Aligned_cols=74  Identities=15%  Similarity=0.161  Sum_probs=56.4

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +++..++.++.+|||+|+|+.+++++..++..|+++|.++.|++++.+.+.+ ++... ++...              ..
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~--------------~~   72 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE--------------NQ   72 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT--------------TC
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc--------------cc
Confidence            3455666678899999999999999999999998889999999988777644 55432 32221              02


Q ss_pred             CccEEEEcCC
Q 019535          223 GADYCFECVG  232 (339)
Q Consensus       223 ~~d~v~d~~g  232 (339)
                      .+|++++|++
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            5899999876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.63  E-value=0.00038  Score=57.63  Aligned_cols=105  Identities=24%  Similarity=0.264  Sum_probs=72.9

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      -.|+++||.|+ +++|.+.++.+...|+ +|+.++++++..+.+++.+...+ .|..+  .+++.+.+.+...  |++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcCCCCe
Confidence            36889999987 8999999999999999 99999999988888887775432 33333  2233333333222  47999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhhc-CCcEEEEeccCC
Q 019535          227 CFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~  258 (339)
                      +++++|..                         ...+.+++.|.. ++|++|.++...
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            99988751                         124556666644 238999987543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.63  E-value=0.00016  Score=55.58  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=58.4

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      .+..+--.+.+|||+|+|.+|.+.++.+...|+++++++.++.++.+ +++++|.. ++++     .++.+.+.     .
T Consensus        16 ~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~-----~   84 (159)
T d1gpja2          16 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA-----R   84 (159)
T ss_dssp             HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-----T
T ss_pred             HHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc-----hhHHHHhc-----c
Confidence            33334446889999999999999999999999988999999877754 55667743 3333     23444443     4


Q ss_pred             ccEEEEcCCCH
Q 019535          224 ADYCFECVGLA  234 (339)
Q Consensus       224 ~d~v~d~~g~~  234 (339)
                      +|+||.|++.+
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            89999999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.58  E-value=6.8e-06  Score=66.99  Aligned_cols=102  Identities=22%  Similarity=0.313  Sum_probs=72.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +.+.++++++++||-+|+|. |..++.+|+..|.. +|++++.+++..+.+++    .+...+.....    +..+   .
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~----d~~~---~  138 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DGYY---G  138 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGG---C
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC----chHH---c
Confidence            56788999999999999875 88888999987632 89999999988777754    34332221111    1110   1


Q ss_pred             hc-CCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          219 MT-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       219 ~~-~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +. .+.||+|+...+-....+.+++.|+++ |+++..
T Consensus       139 ~~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         139 VPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             CGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             cccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            11 237999998776555456788999998 999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=0.00039  Score=57.59  Aligned_cols=102  Identities=21%  Similarity=0.260  Sum_probs=68.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceE--EeCCCCCCccHHHHHHHhcC--CCcc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEF--VNSKNCGDKSVSQIIIDMTD--GGAD  225 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~v--i~~~~~~~~~~~~~l~~~~~--g~~d  225 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++....  .|..+  .+++.+.+.+...  +++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC--HHHHHHHHHHHHHhcCCCC
Confidence            5788999987 8999999999999999 99999999888877755 443222  33333  2233333333222  4799


Q ss_pred             EEEEcCCC--------------------------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          226 YCFECVGL--------------------------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       226 ~v~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++++++|.                          -...+.+++.|...+|++|.++.
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS  138 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  138 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence            99998874                          01245555566543489998874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.54  E-value=0.00075  Score=55.93  Aligned_cols=106  Identities=14%  Similarity=0.157  Sum_probs=70.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCc-cHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDK-SVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~-~~~~~l~~~~~--g~~d~  226 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.....-.-+.... +..+.+.+...  +++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5788899987 8999999999999999 999999998887665 44664433222221112 22222222221  47999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          227 CFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +++++|..                         ...+.+++.|...+|++|.++...
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            99988851                         125566667754349999988643

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.45  E-value=0.00013  Score=59.45  Aligned_cols=106  Identities=14%  Similarity=0.190  Sum_probs=73.1

Q ss_pred             hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C---CceEEeCCCCCCcc
Q 019535          136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G---VTEFVNSKNCGDKS  211 (339)
Q Consensus       136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-g---a~~vi~~~~~~~~~  211 (339)
                      +...|.  +.+.+.++++++||-+|+| .|..++.+++.. . +|++++.+++..+.+++. .   ...++..+.  ...
T Consensus        56 p~~~a~--ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~g  128 (224)
T d1vbfa_          56 LNLGIF--MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLG  128 (224)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGC
T ss_pred             hhhHHH--HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch--hhc
Confidence            444443  5677899999999999987 478888888764 4 899999999888887653 1   122332221  011


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          212 VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       212 ~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +      ...++||.|+-+.+-+...+..++.|+++ |++|..-
T Consensus       129 ~------~~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~pv  165 (224)
T d1vbfa_         129 Y------EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPI  165 (224)
T ss_dssp             C------GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             c------hhhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEEE
Confidence            1      01237999987666555567788999998 9998853

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.45  E-value=0.00012  Score=60.77  Aligned_cols=102  Identities=13%  Similarity=0.105  Sum_probs=69.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----cC-CceEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FG-VTEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~g-a~~vi~~~~~~~~~~~~~l~  217 (339)
                      +...+++++|++||-.|+|. |.++..+|+..|.. +|++++.+++..+.+++    ++ ...+-...    .++.    
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~----~Di~----  147 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR----SDIA----  147 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC----SCTT----
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE----eeee----
Confidence            44568899999999999875 78888888887543 89999999988888764    22 23221111    1221    


Q ss_pred             HhcCC-CccEEEEcCC-CHHHHHHHHHHhhcCCcEEEEec
Q 019535          218 DMTDG-GADYCFECVG-LASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ~~~~g-~~d~v~d~~g-~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +.... .||.||--.+ ....++.+.+.|+++ |+++.+.
T Consensus       148 ~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         148 DFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             cccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            12223 7999984343 445589999999998 9998874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00038  Score=57.43  Aligned_cols=101  Identities=21%  Similarity=0.349  Sum_probs=68.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc---eEEeCCCCCCccHHHHHHHhc--CCCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT---EFVNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~---~vi~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++..   ...|..+  .+++.+.+.+..  -|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence            4788899987 8999999999999999 9999999988877654 34432   2334333  233333333322  2479


Q ss_pred             cEEEEcCCC-------------------------HHHHHHHHHHh--hcCCcEEEEecc
Q 019535          225 DYCFECVGL-------------------------ASLVQEAYACC--RKGWGKTIVLGV  256 (339)
Q Consensus       225 d~v~d~~g~-------------------------~~~~~~~~~~l--~~~~G~~v~~g~  256 (339)
                      |++++++|.                         -...+.+++.|  +.. |++|.++.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS  137 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGS  137 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecc
Confidence            999998875                         11245566665  344 99999975

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.40  E-value=0.00044  Score=58.58  Aligned_cols=103  Identities=15%  Similarity=0.217  Sum_probs=72.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.+.+++++|++||-+|+|- |..+..+|+..|+ +|++++.+++..+.+++    .|....+....   .+.     ..
T Consensus        53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~~  122 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----EE  122 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----GG
T ss_pred             HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----cc
Confidence            66888999999999999873 5677889999999 99999999988766543    45332221111   121     12


Q ss_pred             cCCCccEEEE-----cCCC----------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFE-----CVGL----------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..+.||.|+.     .++.          ...++.+.+.|+|+ |++++-...
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i~  174 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT  174 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEEe
Confidence            2348999864     4443          34588999999998 999876543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.36  E-value=0.0035  Score=51.92  Aligned_cols=79  Identities=14%  Similarity=0.187  Sum_probs=54.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCce---EEeCCCCCCccHHHHHH---Hhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE---FVNSKNCGDKSVSQIII---DMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~---vi~~~~~~~~~~~~~l~---~~~  220 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.|...   ..|..+  .++..+.+.   +..
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHHh
Confidence            5788999987 8999999999999999 9999999988766542    334322   223333  122222222   323


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      ++++|++++++|.
T Consensus        84 ~~~idilvnnAG~   96 (259)
T d2ae2a_          84 HGKLNILVNNAGI   96 (259)
T ss_dssp             TTCCCEEEECCCC
T ss_pred             CCCceEEEECCce
Confidence            3479999998885

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.00036  Score=58.32  Aligned_cols=101  Identities=18%  Similarity=0.288  Sum_probs=74.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----cCC-ceE-EeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGV-TEF-VNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~ga-~~v-i~~~~~~~~~~~~~l  216 (339)
                      +...+++++|++||-.|+|. |.+++.+|+..|.. +|++++.+++..+.+++    +|. ..+ +...     +.    
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-----d~----  164 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-----DI----  164 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-----CG----
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-----cc----
Confidence            56789999999999999875 88888999988632 89999999998887754    453 222 2222     21    


Q ss_pred             HHhcCC-CccEEEEcCCC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDG-GADYCFECVGL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g-~~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ...... .+|.||--.+. ...++.+.++|+++ |+++.+.
T Consensus       165 ~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         165 SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            122233 78988855554 45689999999998 9999875

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.32  E-value=0.0021  Score=50.67  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=55.3

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cC-CceEEeCCCCCCccHHHHHHHhcCC
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~g-a~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      --.++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+.+     .. .....|..+      .+.+.+.. +
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~-~   91 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAV-K   91 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHT-T
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHh-c
Confidence            347899999986 9999999999999999 99999999988766533     12 223444443      22344433 3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++|++.|.
T Consensus        92 ~iDilin~Ag~  102 (191)
T d1luaa1          92 GAHFVFTAGAI  102 (191)
T ss_dssp             TCSEEEECCCT
T ss_pred             CcCeeeecCcc
Confidence            69999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.31  E-value=0.002  Score=46.06  Aligned_cols=93  Identities=11%  Similarity=0.005  Sum_probs=63.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .+.+|||+|+|.+|..-++.+...|+ +|++++.....  ..+++. +....+...- ...++         .++++|+-
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~dl---------~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVEGPF-DETLL---------DSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEESSC-CGGGG---------TTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeeccCC-CHHHh---------CCCcEEee
Confidence            47899999999999999999999999 88887654432  233322 2222332211 11221         25899999


Q ss_pred             cCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          230 CVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +.+....-....+.++.. |.+|.+...
T Consensus        79 at~d~~~n~~i~~~a~~~-~ilVNv~D~  105 (113)
T d1pjqa1          79 ATDDDTVNQRVSDAAESR-RIFCNVVDA  105 (113)
T ss_dssp             CCSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred             cCCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence            999988556777888886 888887643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=0.002  Score=53.14  Aligned_cols=102  Identities=19%  Similarity=0.344  Sum_probs=67.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-----HhcCCce---EEeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----~~~ga~~---vi~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|...   ..|..+  .+++.+.+.+... 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4788999987 8999999999999999 999999988775443     3345432   223333  2233333333222 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhhcC-CcEEEEecc
Q 019535          222 -GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGV  256 (339)
Q Consensus       222 -g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~-~G~~v~~g~  256 (339)
                       |++|++++++|..                         ...+.+++.|... +|++|.++.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence             3799999988751                         1355666777432 379998875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.27  E-value=0.00079  Score=51.80  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=59.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|.|+|+|.+|...++.++..|. +|++.++++++.+.+++.|. +...+..     +   .+     ...|+||-|+..
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~-----~---~~-----~~~DiIilavp~   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDL-----S---LL-----QTAKIIFLCTPI   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCG-----G---GG-----TTCSEEEECSCH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeec-----c---cc-----cccccccccCcH
Confidence            58899999999999888899999 99999999999999888884 3332211     1   11     258999999986


Q ss_pred             HHHHHHHHHH----hhcCCcEEEEec
Q 019535          234 ASLVQEAYAC----CRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~~~----l~~~~G~~v~~g  255 (339)
                      .. .+..++.    +.++ -.++.++
T Consensus        68 ~~-~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          68 QL-ILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HH-HHHHHHHHGGGSCTT-CEEEECC
T ss_pred             hh-hhhhhhhhhhhcccc-cceeecc
Confidence            54 4444443    4443 4444443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00027  Score=57.55  Aligned_cols=106  Identities=21%  Similarity=0.243  Sum_probs=72.0

Q ss_pred             hhhhhhHHHHHhc--CCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----cCC-------ceE
Q 019535          136 GVSTGVGAAWRTA--NVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGV-------TEF  201 (339)
Q Consensus       136 ~~~ta~~al~~~~--~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~ga-------~~v  201 (339)
                      +...|.  +.+.+  .+++|++||.+|+|. |..++.+|+..|.. +|++++.+++..+.+++    .+.       ..+
T Consensus        60 P~~~a~--~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~  136 (224)
T d1i1na_          60 PHMHAY--ALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQL  136 (224)
T ss_dssp             HHHHHH--HHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEE
T ss_pred             hHHHHH--HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEE
Confidence            444444  44544  689999999999874 88888999887633 89999999887776643    221       122


Q ss_pred             EeCCCCCCccHHHHHHHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          202 VNSKNCGDKSVSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       202 i~~~~~~~~~~~~~l~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ...+.      .   .-... +.||+|+-+..-....+..++.|+++ |++|..
T Consensus       137 ~~gD~------~---~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         137 VVGDG------R---MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             EESCG------G---GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             EEeec------c---cccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            21111      0   01112 27999997766555567889999998 999885

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00016  Score=59.78  Aligned_cols=101  Identities=22%  Similarity=0.283  Sum_probs=71.5

Q ss_pred             HHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHH
Q 019535          143 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI  215 (339)
Q Consensus       143 al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~  215 (339)
                      .+...++++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .+...+-   .++   
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~---~~~---   95 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY---   95 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC---
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHH---hhc---
Confidence            366788999999999999874 6677788888898 99999999988877654    3532   2222111   110   


Q ss_pred             HHHhcCCCccEEEEc-----C-CCHHHHHHHHHHhhcCCcEEEEec
Q 019535          216 IIDMTDGGADYCFEC-----V-GLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       216 l~~~~~g~~d~v~d~-----~-g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                         ...+.||+|+..     . .-...++++.+.|+|+ |+++...
T Consensus        96 ---~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          96 ---VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             ---CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             ---cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence               123389999752     1 2355688999999998 9988754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.0031  Score=51.73  Aligned_cols=105  Identities=15%  Similarity=0.186  Sum_probs=69.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .|+++||.|+ +++|...+.-+...|+ +|+.+++++++.+.+.    ..|.. +  ..|..+  .+.+.+.++...  .
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHc
Confidence            5889999987 8999999999999999 9999999998876553    34432 2  334333  223333333332  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhhcC-CcEEEEeccCCC
Q 019535          222 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQP  259 (339)
Q Consensus       222 g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~-~G~~v~~g~~~~  259 (339)
                      |.+|++++++|..                         ...+.++..+... +|++|.++...+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            3799999998861                         1234455555432 378998887654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.24  E-value=0.00066  Score=55.88  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=55.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceE-EeCCCCCCccHHHHHHHhcC--CCccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~  226 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++++..+ .|..+  .+++.+.+.+...  +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence            4788999987 8999999999999999 9999999988877664 4555432 34333  2333333333222  37999


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      +++++|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998875

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.23  E-value=0.0028  Score=46.60  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|+|.|.|.+|+..++.+...|. .|++++.++++.+.++. ++.. ++..+.    .-.+.+++..-..+|.++-++++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~----~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC----TKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT----TSHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc----cchhhhhhcChhhhhhhcccCCc
Confidence            58999999999999999999999 99999999999888765 5543 444332    22333444433378999998888


Q ss_pred             HH
Q 019535          234 AS  235 (339)
Q Consensus       234 ~~  235 (339)
                      ..
T Consensus        76 d~   77 (132)
T d1lssa_          76 EE   77 (132)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.22  E-value=0.0027  Score=52.59  Aligned_cols=79  Identities=25%  Similarity=0.373  Sum_probs=54.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCce---EEeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE---FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~---vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|...   ..|..+  .+++.+.+.+...  
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5789999987 8999999999999999 9999999988776553    345322   233333  1223333332222  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      |++|+++++.|.
T Consensus        81 g~iDilVnnaG~   92 (260)
T d1zema1          81 GKIDFLFNNAGY   92 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCeehhhhcc
Confidence            479999998774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.22  E-value=0.0027  Score=52.44  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=54.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..   ...|..+  .+++.+.+.+...  +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcCCc
Confidence            5789999987 8999999999999999 899999998877665 445532   2233333  1233333332222  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        81 DilVnnAg~   89 (254)
T d1hdca_          81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecCcc
Confidence            999998875

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.21  E-value=0.00098  Score=56.17  Aligned_cols=100  Identities=13%  Similarity=0.122  Sum_probs=71.8

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceE-EeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEF-VNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~v-i~~~~~~~~~~~~~l~  217 (339)
                      +.+.+++++|++||-+|+|- |..++.+|+..|+ +|+++..+++..+++++    .|- +.+ +..     .++     
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~-----~d~-----  121 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL-----AGW-----  121 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE-----SCG-----
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH-----hhh-----
Confidence            66778999999999999873 7888889999999 99999999998887754    231 111 111     121     


Q ss_pred             HhcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ....+.+|.|+.     .++.   ...++.+.+.|+++ |++++...
T Consensus       122 ~~~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i  167 (285)
T d1kpga_         122 EQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  167 (285)
T ss_dssp             GGCCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hcccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence            112347888864     4443   34588999999998 99987544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.20  E-value=0.014  Score=47.63  Aligned_cols=79  Identities=22%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCce---EEeCCCCCCccHHHHHHHhcC--CC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GG  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--g~  223 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++  .+.+++.|...   ..|..+  .+++.+.+.+...  |+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence            4788899987 8999999999999999 89999987643  23345666432   223333  2223333332222  47


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|++++++|.
T Consensus        81 iDilVnnAG~   90 (247)
T d2ew8a1          81 CDILVNNAGI   90 (247)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998875

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00068  Score=56.40  Aligned_cols=104  Identities=16%  Similarity=0.190  Sum_probs=73.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----c--C-CceEEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----F--G-VTEFVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~--g-a~~vi~~~~~~~~~~~~~  215 (339)
                      +...+++++|++||-.|+|. |.+++.+|+..|.. +|++++.+++..+.+++    +  + .+.+-...    .+..+ 
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~----~d~~~-  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV----SDLAD-  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC----SCGGG-
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe----ccccc-
Confidence            66788999999999999875 88999999998743 89999999998888754    2  1 22221111    12111 


Q ss_pred             HHHhcCCCccEEEEcCCC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          216 IIDMTDGGADYCFECVGL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       ..+..+.||.||--.+. ...++.+.+.|+++ |+++.+.
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence             01112379988744444 45588999999998 9998874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.0022  Score=53.05  Aligned_cols=79  Identities=23%  Similarity=0.389  Sum_probs=54.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCC-ceE----EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGV-TEF----VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga-~~v----i~~~~~~~~~~~~~l~~~~~  221 (339)
                      +++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+. ..+    .|..+  .++..+.+.+...
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~~   85 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            5788999987 8999999999999999 999999998886665    23332 122    23333  2333333333222


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        +++|++++++|.
T Consensus        86 ~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          86 QHSGVDICINNAGL   99 (257)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hcCCCCEEEecccc
Confidence              479999998876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.19  E-value=0.0016  Score=54.02  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=55.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccH---HHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSV---SQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~---~~~l~~~~  220 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|..+  .+++   .+.+.+..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   81 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            5889999987 8999999999999999 999999998776554    3345432 2  33333  1222   23344444


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      ++.+|++++++|.
T Consensus        82 ~g~idilinnag~   94 (258)
T d1ae1a_          82 DGKLNILVNNAGV   94 (258)
T ss_dssp             TSCCCEEEECCCC
T ss_pred             CCCcEEEeccccc
Confidence            4579999998876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.0015  Score=50.56  Aligned_cols=72  Identities=10%  Similarity=0.108  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC---CceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~g---a~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      ..++++|||+|+|+.+++++.-+..+|+ +|+.+.|++++.+.+.+ +.   ....+...+            .....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------~~~~~~d   81 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------LEGHEFD   81 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------GTTCCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------ccccccc
Confidence            3568899999999999999998899999 89999999988766543 32   222222111            1112689


Q ss_pred             EEEEcCCCH
Q 019535          226 YCFECVGLA  234 (339)
Q Consensus       226 ~v~d~~g~~  234 (339)
                      ++|+|++..
T Consensus        82 liIN~Tp~G   90 (170)
T d1nyta1          82 LIINATSSG   90 (170)
T ss_dssp             EEEECCSCG
T ss_pred             eeecccccC
Confidence            999998643

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.17  E-value=0.0022  Score=49.54  Aligned_cols=96  Identities=8%  Similarity=0.012  Sum_probs=64.8

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +++|||+|+|-+|..+++.+...|. +|++++++.++.+.+.+ ++...+. ...   ........... ...|.++.+.
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~-~~~---~~~~~~~~~~i-~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPI-SLD---VNDDAALDAEV-AKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEE-ECC---TTCHHHHHHHH-TTSSEEEECS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccc-ccc---ccchhhhHhhh-hccceeEeec
Confidence            5789999999999999999999999 89999999998888755 4433332 222   11122222221 2478888888


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEec
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +..........++..+ -.++...
T Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          76 PYTFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             CGGGHHHHHHHHHHHT-CEEECSS
T ss_pred             cchhhhHHHHHHHhhc-cceeecc
Confidence            7766455555666664 5665554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.0012  Score=54.29  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=54.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCce--EEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...  .+|..+   .+-.+++.+.. |++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALGGI-GPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-CCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHc-CCCeEE
Confidence            5789999987 8999999999999999 9999999988776653 444322  233333   33333332222 489999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      ++++|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.15  E-value=0.00016  Score=59.45  Aligned_cols=100  Identities=15%  Similarity=0.189  Sum_probs=63.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC---CccHHHHHHHhcCC-CccE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG---DKSVSQIIIDMTDG-GADY  226 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~~~~~l~~~~~g-~~d~  226 (339)
                      ++++|||.|+ +++|.+.++.+...|+ +|+.+++++.+...     ....+......   .+.+...+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999987 8999999999999999 99998876543211     11111111100   01122333344444 7999


Q ss_pred             EEEcCCC--------------------------HHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          227 CFECVGL--------------------------ASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       227 v~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +++++|.                          -...+.+++.++++ |++|.++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            9998874                          01244566677886 9999997643

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.0012  Score=54.25  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=55.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCce--EEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...  .+|..+   .+-.+++.+.. +++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~-g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALGSV-GPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-CCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHh-CCceEE
Confidence            5889999987 8999999999999999 9999999988877654 444322  334443   33333333322 379999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      ++++|.
T Consensus        81 VnnAg~   86 (244)
T d1pr9a_          81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.0024  Score=53.17  Aligned_cols=106  Identities=16%  Similarity=0.157  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCce-EEeCCCCCCccHHHHHHH-h--c
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE-FVNSKNCGDKSVSQIIID-M--T  220 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~~-vi~~~~~~~~~~~~~l~~-~--~  220 (339)
                      -.|+++||.|+ +++|++.++.+...|+ +|+.+++++++++.+.+     .+... .+..+. ......+.+.+ .  .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhh-hhHHHHHHHHHHHHHH
Confidence            35889999987 8999999999999999 99999999988776632     23322 222221 11222222222 1  1


Q ss_pred             CCCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535          221 DGGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       221 ~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      .+..|+++++.|..                         ...+.++..+...+|+++.++...
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~  152 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA  152 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence            23789998876640                         124444445544238988887644

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.13  E-value=0.004  Score=51.51  Aligned_cols=79  Identities=19%  Similarity=0.165  Sum_probs=54.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc---eEEeCCCCCCccHHH---HHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSVSQ---IIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~---~vi~~~~~~~~~~~~---~l~~~~  220 (339)
                      +++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..   ...|..+  .++..+   .+.+..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            4788999987 8999999999999999 9999999988766552    23322   1233333  122222   333333


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      ++.+|++++++|.
T Consensus        84 ~g~idilvnnAG~   96 (259)
T d1xq1a_          84 GGKLDILINNLGA   96 (259)
T ss_dssp             TTCCSEEEEECCC
T ss_pred             CCCcccccccccc
Confidence            4579999998885

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0017  Score=50.80  Aligned_cols=97  Identities=15%  Similarity=0.173  Sum_probs=60.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcC-----CceEEeCCCCCCccHHHHHHHhcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFG-----VTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~g-----a~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+.+|+|+|+|+.+.+++..+...|+++++.+.+++++.+.+.    +++     ...+.+..+  ...+.+.+     .
T Consensus        17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~   89 (182)
T d1vi2a1          17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEAL-----A   89 (182)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHH-----H
T ss_pred             CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhh-----c
Confidence            5789999999999999999999999989999999877655432    222     122333333  11122222     1


Q ss_pred             CccEEEEcCCCHHH------HHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVGLASL------VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g~~~~------~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+|++|+|++-...      ...-+..+.++ ..++++-.
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~Y  128 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECVY  128 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECCC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhhc
Confidence            58999999863210      00112345665 67776643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.10  E-value=0.0012  Score=51.86  Aligned_cols=101  Identities=15%  Similarity=0.150  Sum_probs=67.1

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-----------------eEEeCCC
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-----------------EFVNSKN  206 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a~-----------------~vi~~~~  206 (339)
                      +..+.+.++.+||.+|+|. |..+..+|+ .|+ +|++++.+++..+.+++.. ..                 ..+..+-
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4456789999999999874 788888886 499 9999999999999987631 10                 1111111


Q ss_pred             CCCccHHHHHHHhcCCCccEEEEcCCC--------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          207 CGDKSVSQIIIDMTDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~g~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                         .++.....    ..+|+|++...-        ...++.+.+.|+++ |++++...
T Consensus        90 ---~~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~~  139 (201)
T d1pjza_          90 ---FALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLITL  139 (201)
T ss_dssp             ---SSSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEEE
T ss_pred             ---cccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEEc
Confidence               11111111    158898874331        23478889999997 98776543

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.09  E-value=0.0015  Score=54.93  Aligned_cols=102  Identities=11%  Similarity=0.156  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.+.+++++|++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|....+....   .+.     ..
T Consensus        44 ~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~---~d~-----~~  113 (280)
T d2fk8a1          44 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL---QGW-----ED  113 (280)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCG-----GG
T ss_pred             HHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh---hhh-----hh
Confidence            66778899999999999873 5566778888899 99999999998877754    34221111111   111     11


Q ss_pred             cCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ..+.||.|+.     .++.   ...++.+.+.|+|+ |++++-..
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~i  157 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS  157 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEEe
Confidence            2347899864     3343   34588899999998 99987543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.08  E-value=0.0021  Score=49.96  Aligned_cols=85  Identities=18%  Similarity=0.134  Sum_probs=57.7

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE-------eCCCCCCccHHHHHHHhcCCCccE
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-------NSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi-------~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .++.|+|+|.+|.+.+..+...|+ .|+++++++++.+.+++.+.....       ........+..+.+     ..+|+
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD~   75 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV   75 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCCE
Confidence            689999999999999999999999 999999999998888765422110       00000001222322     24899


Q ss_pred             EEEcCCCHHHHHHHHHHhh
Q 019535          227 CFECVGLASLVQEAYACCR  245 (339)
Q Consensus       227 v~d~~g~~~~~~~~~~~l~  245 (339)
                      +|-++.... .+..++.++
T Consensus        76 iii~v~~~~-~~~~~~~i~   93 (184)
T d1bg6a2          76 ILIVVPAIH-HASIAANIA   93 (184)
T ss_dssp             EEECSCGGG-HHHHHHHHG
T ss_pred             EEEEEchhH-HHHHHHHhh
Confidence            999998765 444444343

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.07  E-value=0.00084  Score=54.88  Aligned_cols=93  Identities=18%  Similarity=0.169  Sum_probs=68.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      ..++.+||-+|+| .|..+..+++ .|+ +|++++.+++..+.+++.+....+..+.   .++     ....+.+|+|+.
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTTCEEEEEE
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----ccccccccceee
Confidence            4578899999998 4888888876 588 9999999999999999877665555433   222     122347999886


Q ss_pred             cCC------C-HHHHHHHHHHhhcCCcEEEEe
Q 019535          230 CVG------L-ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       230 ~~g------~-~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ...      . ...++.+.++|.++ |.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            432      2 34478889999997 988764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.05  E-value=0.0037  Score=51.46  Aligned_cols=168  Identities=14%  Similarity=0.115  Sum_probs=93.8

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHhc--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      .++.+||.|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  .+++.+.+.+..  -
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4678899987 8999999999989999 999999998876654    3345322   223333  223333333221  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHh--hcCCcEEEEeccCCCC----CcccccH---
Q 019535          222 GGADYCFECVGLA-------------------------SLVQEAYACC--RKGWGKTIVLGVDQPG----SQLSLSS---  267 (339)
Q Consensus       222 g~~d~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~~~~----~~~~~~~---  267 (339)
                      |++|+++++.|..                         ...+.++..+  +.. |++|.++...+.    .......   
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~~~~~~~~~~~~Y~asKa  164 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY-GRIINISSIVGLTGNVGQANYSSSKA  164 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC-EEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCC-eEEEEECCHHhcCCCCCCHHHHHHHH
Confidence            4899999988751                         1234444444  343 999998753211    1111000   


Q ss_pred             ----------HHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535          268 ----------FEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG  328 (339)
Q Consensus       268 ----------~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~  328 (339)
                                ..+-.+++++-....+....   ....++..+.+.+. ..+    .+.-..+|+.++..++.+.
T Consensus       165 al~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~-~pl----~R~~~pedvA~~v~fL~S~  233 (251)
T d2c07a1         165 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN-IPA----GRMGTPEEVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT-CTT----SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc-CCC----CCCcCHHHHHHHHHHHhCc
Confidence                      11334456665544443221   11223444444443 122    2333578899998888654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.03  E-value=0.0026  Score=52.47  Aligned_cols=95  Identities=21%  Similarity=0.330  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      .+++++||-+|+|. |..++.++ ..|+ +|++++.+++..+.+++    .|.. .++.      .+..+   ....+.|
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~---~~~~~~f  185 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEA---ALPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHH---HGGGCCE
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------ccccc---ccccccc
Confidence            57899999999874 66666555 4688 89999999998887764    3433 2332      22222   1223489


Q ss_pred             cEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+|+......   ..++.+.+.|+++ |++++.|..
T Consensus       186 D~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             chhhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence            9998655432   3356788899997 999987653

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00025  Score=61.05  Aligned_cols=104  Identities=17%  Similarity=0.214  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh----cC-----------CceE--EeCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FG-----------VTEF--VNSK  205 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----~g-----------a~~v--i~~~  205 (339)
                      +...+++++|++||-.|+|. |.+++.+|+..|.. +|++++.+++..+.+++    ++           .+.+  ...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            56678999999999999875 88999999998753 89999999988877753    11           1111  1111


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEEcCCC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          206 NCGDKSVSQIIIDMTDGGADYCFECVGL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       206 ~~~~~~~~~~l~~~~~g~~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      -   .+..+   .+..+.+|.||--.+. ...++.+.+.|+++ |+++.+.
T Consensus       169 i---~~~~~---~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I---SGATE---DIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---hhccc---ccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            1   11111   1122268888733333 34588999999998 9999874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.01  E-value=0.0012  Score=54.30  Aligned_cols=79  Identities=13%  Similarity=0.216  Sum_probs=55.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+. +++.. ..  .|..+  .+++.+.+++...  +++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCCC
Confidence            5788999987 8999999999999999 9999999988876654 45422 22  33333  2233333333322  379


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        82 dilinnAG~   90 (244)
T d1nffa_          82 HVLVNNAGI   90 (244)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999998876

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.99  E-value=0.0044  Score=52.52  Aligned_cols=102  Identities=20%  Similarity=0.263  Sum_probs=65.4

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hHHHHH----HhcCCceEEeCCCCCCccHHHHHH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEIG----KRFGVTEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~  217 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+..+++.         +..+.+    ...+.....+..+  .++..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            4788888887 8999999999999999 899886542         222222    2344445556555  233333333


Q ss_pred             Hhc--CCCccEEEEcCCCH-------------------------HHHHHHHHHhhc-CCcEEEEecc
Q 019535          218 DMT--DGGADYCFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGV  256 (339)
Q Consensus       218 ~~~--~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  256 (339)
                      +..  -|++|++++++|..                         ...+.++..|.. ++|++|.++.
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            322  24799999998851                         124555666632 2389999975

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.99  E-value=0.0015  Score=54.43  Aligned_cols=79  Identities=25%  Similarity=0.356  Sum_probs=54.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC---CceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFV--NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g---a~~vi--~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++   ....+  |..+  .+++.+.+.+...  |
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            5788999987 8999999999999999 9999999988876653 333   22222  3333  2333333333222  4


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++++++|.
T Consensus        82 ~iD~lVnnAG~   92 (268)
T d2bgka1          82 KLDIMFGNVGV   92 (268)
T ss_dssp             CCCEEEECCCC
T ss_pred             Ccceecccccc
Confidence            79999998874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.98  E-value=0.0031  Score=52.81  Aligned_cols=102  Identities=14%  Similarity=0.086  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l  216 (339)
                      +.....+.++.+||-+|+| .|..+..+++..|+ +|++++.++...+.+++    .|..   .++..+-   .++    
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence            4455678999999999987 37778888888898 99999999988777754    3422   2332222   111    


Q ss_pred             HHhcCCCccEEEEc-----CCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFEC-----VGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~-----~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       ....+.||+|+-.     +.. ...++++.++|+++ |+++....
T Consensus       130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence             1112379999752     222 34588999999998 99888754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.96  E-value=0.0019  Score=52.56  Aligned_cols=101  Identities=21%  Similarity=0.270  Sum_probs=69.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~  217 (339)
                      +.+.++++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .+..  .++..+.   .++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            66788999999999999874 7888888774 56 89999999988777644    3332  2222111   111     


Q ss_pred             HhcCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+..+.||+|+.+-.      -...++++.+.|+|+ |+++..-.
T Consensus        77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~~  120 (234)
T d1xxla_          77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVDH  120 (234)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEEc
Confidence            122347999985322      234588999999998 99887643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.92  E-value=0.0058  Score=46.88  Aligned_cols=91  Identities=20%  Similarity=0.271  Sum_probs=65.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|+|+|.|.+|...+..++..|.. +|++++++++..+.+++.+. +.+.+..+           .......|+|+-|+.
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----------~~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KVEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GGGGTCCSEEEECSC
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----------hhhccccccccccCC
Confidence            699999999999999888888853 89999999999999999885 34433222           111125799999998


Q ss_pred             CHHH---HHHHHHHhhcCCcEEEEeccC
Q 019535          233 LASL---VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       233 ~~~~---~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ....   ++...+.+.++ -.++.++..
T Consensus        72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             chhhhhhhhhhhcccccc-ccccccccc
Confidence            6542   44555666775 677777653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.91  E-value=0.0068  Score=46.11  Aligned_cols=88  Identities=17%  Similarity=0.149  Sum_probs=64.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...++-+...|+ +|++.++++++.+.+++.++. +.       .+..+.+++     .|+||-|+.++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~-~~-------~~~~e~~~~-----~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAE-TA-------STAKAIAEQ-----CDVIITMLPNS   67 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------SSHHHHHHH-----CSEEEECCSSH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhh-hc-------ccHHHHHhC-----CCeEEEEcCCH
Confidence            48899999999999988888999 999999999999998887763 21       233333333     79999999877


Q ss_pred             HHHHHHH-------HHhhcCCcEEEEeccC
Q 019535          235 SLVQEAY-------ACCRKGWGKTIVLGVD  257 (339)
Q Consensus       235 ~~~~~~~-------~~l~~~~G~~v~~g~~  257 (339)
                      ...+..+       ..+.++ -.++.++..
T Consensus        68 ~~v~~v~~~~~~~~~~~~~g-~iiid~sT~   96 (161)
T d1vpda2          68 PHVKEVALGENGIIEGAKPG-TVLIDMSSI   96 (161)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECSCC
T ss_pred             HHHHHHHhCCcchhhccCCC-CEEEECCCC
Confidence            6565543       344554 566666543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.90  E-value=0.0016  Score=54.01  Aligned_cols=79  Identities=25%  Similarity=0.320  Sum_probs=55.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce---EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+ +++|...   ..|..+  .+++.+.+.+...  |++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            4778899987 8999999999999999 999999998877654 5566432   234333  2233333333222  479


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+++++.|.
T Consensus        81 DilVnnAg~   89 (256)
T d1k2wa_          81 DILVNNAAL   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEeeccc
Confidence            999998885

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.90  E-value=0.0003  Score=57.20  Aligned_cols=106  Identities=20%  Similarity=0.199  Sum_probs=66.7

Q ss_pred             hhhhhhHHHHHhc--CCCCCCEEEEEccCHHHHHHHHHHHHc---CC---CEEEEEcCChhHHHHHHh---------cCC
Q 019535          136 GVSTGVGAAWRTA--NVEVGSTVVIFGLGSIGLAVAEGARLC---GA---TRIIGVDVISEKFEIGKR---------FGV  198 (339)
Q Consensus       136 ~~~ta~~al~~~~--~~~~~~~VLI~G~G~iG~~a~~la~~~---G~---~~Vi~~~~~~~~~~~~~~---------~ga  198 (339)
                      +...|.  +.+.+  .++++++||.+|+|. |..++.+++..   |+   .+|++++.+++..+.+++         .+.
T Consensus        64 P~~~a~--~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~  140 (223)
T d1r18a_          64 PHMHAF--ALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS  140 (223)
T ss_dssp             HHHHHH--HHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHH--HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCc
Confidence            444453  34444  789999999998753 66666555554   42   279999998877666543         121


Q ss_pred             c--eEEeCCCCCCccHHHHHHHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          199 T--EFVNSKNCGDKSVSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       199 ~--~vi~~~~~~~~~~~~~l~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .  .++..+.      .+   .+.. +.||.|+-+.+-+..-+..++.|+++ |++|..
T Consensus       141 ~nv~~~~~d~------~~---~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         141 GQLLIVEGDG------RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             TSEEEEESCG------GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cEEEEEeccc------cc---ccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence            2  2222221      11   1112 37999987666555467889999998 999874

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.90  E-value=0.0014  Score=51.46  Aligned_cols=101  Identities=16%  Similarity=0.127  Sum_probs=67.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +...++++++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|. +.+- ...   .+..+..  
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~-~~~---gda~~~~--   95 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVT-LME---GDAPEAL--   95 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEE-EEE---SCHHHHH--
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceE-EEE---Cchhhcc--
Confidence            44567899999999998763 5566666664 44 99999999988877754    553 2221 111   2333322  


Q ss_pred             hcC-CCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 MTD-GGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~~~-g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                       .. ..+|.|+-..+.   ...++.+.+.|+++ |+++...
T Consensus        96 -~~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          96 -CKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             -TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -cccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence             23 379999854432   34577888999997 9988764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.87  E-value=0.0016  Score=54.57  Aligned_cols=78  Identities=19%  Similarity=0.196  Sum_probs=54.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce---EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+ +++|...   ..|..+  .+++.+.+.+...  +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence            5789999987 8999999999999999 999999998887665 3455322   223333  1223333332222  379


Q ss_pred             cEEEEcCC
Q 019535          225 DYCFECVG  232 (339)
Q Consensus       225 d~v~d~~g  232 (339)
                      |++++++|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999886

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0012  Score=54.27  Aligned_cols=77  Identities=19%  Similarity=0.328  Sum_probs=57.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCc-eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+. +.. .+.|...   .+..+.+.+.. +++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~-~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-ERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-SCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---ccccccccccc-ccceeEE
Confidence            5788999987 8999999999999999 999999998888777654 332 2333333   55555555443 3799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      ++.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98876

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.85  E-value=0.00031  Score=57.66  Aligned_cols=98  Identities=18%  Similarity=0.235  Sum_probs=61.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCC---ccHHHHHHHhcC-CCccEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD---KSVSQIIIDMTD-GGADYC  227 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~---~~~~~~l~~~~~-g~~d~v  227 (339)
                      ..+|||.|+ +++|.+.++.+...|+ +|+.+++++++...     ....+..+....   ....+.+..... +++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457999987 8999999999999999 99999987653211     111111111000   111122233223 489999


Q ss_pred             EEcCCC--------------------------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          228 FECVGL--------------------------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       228 ~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++++|.                          -...+..+..++++ |+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            998874                          01245666777886 999998754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.84  E-value=0.0041  Score=50.60  Aligned_cols=72  Identities=21%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE-eCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +++++||.|+ +++|.+.++.+...|+ +|+.++++++..   ++.+...+. |..+    . .+.+.+.. +.+|++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~~----~-~~~~~~~~-g~iD~lVn   72 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLRK----D-LDLLFEKV-KEVDILVL   72 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTTT----C-HHHHHHHS-CCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchHH----H-HHHHHHHh-CCCcEEEe
Confidence            4788999987 8999999999999999 999999887554   445543332 2222    2 33344433 47999999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      ++|.
T Consensus        73 nAG~   76 (234)
T d1o5ia_          73 NAGG   76 (234)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8875

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.84  E-value=0.0023  Score=51.68  Aligned_cols=101  Identities=19%  Similarity=0.280  Sum_probs=69.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~  217 (339)
                      +.+.++++++++||-+|+| .|..+..+++. |. +|++++.+++..+.+++    .+...  ++..+.   .++     
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l-----   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence            6678899999999999987 47777777754 66 89999999988777653    34332  232222   111     


Q ss_pred             HhcCCCccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          218 DMTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       218 ~~~~g~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+..+.||+|+..-     .. ...++++.++|+|+ |+++....
T Consensus        76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~~  119 (231)
T d1vl5a_          76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  119 (231)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            12234799998532     22 34589999999998 99988643

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0021  Score=53.14  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=53.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--  221 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.. ..  .|..+  .+++.+.+.+...  
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~--~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5788899987 8999999999999999 999999998776554    345533 22  23222  1222222222221  


Q ss_pred             CCccEEEEcCCC
Q 019535          222 GGADYCFECVGL  233 (339)
Q Consensus       222 g~~d~v~d~~g~  233 (339)
                      |++|++++++|.
T Consensus        87 g~iDilvnnAG~   98 (255)
T d1fmca_          87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEeeeCCcC
Confidence            479999998875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.78  E-value=0.002  Score=53.14  Aligned_cols=79  Identities=22%  Similarity=0.262  Sum_probs=53.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC---CceE--EeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG---VTEF--VNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~g---a~~v--i~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+.+ ++   ....  .|..+  .+++.+.+.+...  |
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence            4788899987 8999999999999999 99999999888776543 32   1122  23333  1222222222221  4


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++++++|.
T Consensus        82 ~iDiLVnnAg~   92 (251)
T d1zk4a1          82 PVSTLVNNAGI   92 (251)
T ss_dssp             SCCEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.76  E-value=0.011  Score=48.63  Aligned_cols=104  Identities=21%  Similarity=0.314  Sum_probs=64.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHH-----HhcCCceE---EeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIG-----KRFGVTEF---VNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~-----~~~ga~~v---i~~~~~~~~~~~~~l~~~~~  221 (339)
                      +|+++||.|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     +..|....   .|..+  .+++.+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            5788899987 8999999999999999 999999863 444433     22343322   23332  1223332322222


Q ss_pred             --CCccEEEEcCCCH-------------------------HHHHHHHHHhhc-CCcEEEEeccCC
Q 019535          222 --GGADYCFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGVDQ  258 (339)
Q Consensus       222 --g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~  258 (339)
                        |++|++++++|..                         ...+.+++.+.. ++|++|.++...
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  144 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH  144 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence              4799999988751                         124455555543 238999987543

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00077  Score=54.93  Aligned_cols=98  Identities=14%  Similarity=0.126  Sum_probs=66.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      .+|.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++....  ..+....   .+.......+..+.||.++
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~fD~i~  126 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTLPDGHFDGIL  126 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGSCTTCEEEEE
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---cccccccccccccccccee
Confidence            5788999999873 7788888887666 899999999999888764311  1111111   2333333444445899985


Q ss_pred             -EcCCC----------HHHHHHHHHHhhcCCcEEEEe
Q 019535          229 -ECVGL----------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       229 -d~~g~----------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                       |.+..          ...++++.+.|+++ |+++..
T Consensus       127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             ecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence             65543          22467788999998 998765

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.71  E-value=0.0028  Score=46.64  Aligned_cols=74  Identities=15%  Similarity=0.357  Sum_probs=54.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +++|+|.|.+|+.+++.+...|. .|++++.++++.+.++..|...++- +. ...+.   +.+..-..+|.+|-++++.
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~-~~~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NA-TEENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CT-TCTTH---HHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ec-ccchh---hhccCCccccEEEEEcCch
Confidence            57888999999999999999999 8999999999999998888644432 22 11332   3333222678888877754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.70  E-value=0.0087  Score=49.70  Aligned_cols=104  Identities=21%  Similarity=0.246  Sum_probs=67.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHH----HHhcCCceEE-eCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEI----GKRFGVTEFV-NSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~----~~~~ga~~vi-~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.++++. +..+.    +++.|..... ..+-...+++.+.+.+...  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999987 8999999999999999 898887664 33332    3445543322 2222112334444443322  3


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++|+++++.+..                         ...+.++..|... |+++.++..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            799999988751                         1356677788886 888887643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.0017  Score=51.75  Aligned_cols=97  Identities=15%  Similarity=0.101  Sum_probs=62.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .++|+|+|+ |.+|..+++.+...|. +|.++++++++.......+... +.-+-   .+. +.+.+... +.|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~gD~---~d~-~~l~~al~-~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHV-VVGDV---LQA-ADVDKTVA-GQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEE-EESCT---TSH-HHHHHHHT-TCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccc-ccccc---cch-hhHHHHhc-CCCEEEEEe
Confidence            368999987 9999999998888899 9999999988765444444433 33222   222 23333332 589999998


Q ss_pred             CCH----------HHHHHHHHHhhcC-CcEEEEecc
Q 019535          232 GLA----------SLVQEAYACCRKG-WGKTIVLGV  256 (339)
Q Consensus       232 g~~----------~~~~~~~~~l~~~-~G~~v~~g~  256 (339)
                      |..          .....+++.++.. -.+++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            752          1133445555553 137777753

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.67  E-value=0.0041  Score=50.86  Aligned_cols=102  Identities=19%  Similarity=0.265  Sum_probs=68.7

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce-E--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGA  224 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~-v--i~~~~~~~~~~~~~l~~~~~--g~~  224 (339)
                      .|+++||.|+ +++|.+.++-+...|+ +|+.+.++.++.+.+ ++++... .  .|..+  .+++.+.+.+...  +++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhCCc
Confidence            5789999987 8999999999999999 999999998876655 4566432 2  23333  2233333333322  479


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          225 DYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       225 d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+++++++..                         ...+..+..+... +.++.++..
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~  137 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSV  137 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCC
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccc
Confidence            9999987641                         1245556677775 777666554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0034  Score=51.76  Aligned_cols=103  Identities=21%  Similarity=0.157  Sum_probs=66.5

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----C-Cc---eEEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----G-VT---EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----g-a~---~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.++++.++.+.+.+ +    + ..   ...|..+  .+++.+.+.+...
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            4788999987 8999999999999999 99999999887665432 2    1 11   1234333  2223333333222


Q ss_pred             --CCccEEEEcCCCH-----------------HHHHHHHHHhhcC----CcEEEEeccC
Q 019535          222 --GGADYCFECVGLA-----------------SLVQEAYACCRKG----WGKTIVLGVD  257 (339)
Q Consensus       222 --g~~d~v~d~~g~~-----------------~~~~~~~~~l~~~----~G~~v~~g~~  257 (339)
                        |++|++++++|..                 ...+.+++.|...    .|++|.++..
T Consensus        79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence              4799999998861                 1234555555431    2789998754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.61  E-value=0.0053  Score=50.67  Aligned_cols=78  Identities=17%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHhcC--C
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      |+..||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  .+++.+.+.+...  |
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            456688887 8999999999999999 999999998776654    3445332   233333  2233333333222  4


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++++++|.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999998875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.60  E-value=0.0046  Score=52.03  Aligned_cols=79  Identities=11%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--  220 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.++++.++.+.+     ++.|.. ..+  |..+  .+...+.+....  
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIKV  100 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC--hHHHHHHhhhhhhh
Confidence            4789999986 8999999999999999 999999998765443     223433 232  3222  122222222222  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      .+++|+++++.|.
T Consensus       101 ~g~iDilvnnAg~  113 (294)
T d1w6ua_         101 AGHPNIVINNAAG  113 (294)
T ss_dssp             TCSCSEEEECCCC
T ss_pred             ccccchhhhhhhh
Confidence            2489999998875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.57  E-value=0.0055  Score=50.62  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHHHH----HHhcCCce-EEeCCCCCCccHHHHHHHhcC--
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--  221 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~----~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--  221 (339)
                      -.|+++||.|+ +++|.+.++.+...|+ +|+.+. ++++..+.    +++.|... .+..+-...++..+.+.+...  
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            35889999987 8999999999999999 787764 44444443    34456432 222222112233333333222  


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +++|++++++|..                         ...+.++..+... |.++.+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            3799999988761                         1366777788886 88777754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.57  E-value=0.0014  Score=54.02  Aligned_cols=79  Identities=20%  Similarity=0.195  Sum_probs=54.1

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcC-Cc-eEE--eCCCCCCcc---HHHHHHHhcCC-
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFG-VT-EFV--NSKNCGDKS---VSQIIIDMTDG-  222 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~g-a~-~vi--~~~~~~~~~---~~~~l~~~~~g-  222 (339)
                      .++|||.|+ +++|.+.++.+...|+. +|+.++++.++.+.+++.. .. +++  |..+  .+.   +.+.+.+..+. 
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence            478999987 89999999888888863 7888999998888777643 22 222  3333  122   23344444444 


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|++++++|.
T Consensus        81 ~idilinnAG~   91 (250)
T d1yo6a1          81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CeEEEEEcCcc
Confidence            79999998874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.56  E-value=0.0037  Score=52.23  Aligned_cols=79  Identities=23%  Similarity=0.261  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC--c--e--EEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T--E--FVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga--~--~--vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|.  .  .  ..|..+  .+++.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence            4788999987 8999999999999999 9999999988766553    3332  1  1  223333  223333333322


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  |++|++++++|.
T Consensus        80 ~~~G~iDilVnnAG~   94 (274)
T d1xhla_          80 AKFGKIDILVNNAGA   94 (274)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCceEEEeeccc
Confidence            2  379999998763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.54  E-value=0.0067  Score=49.85  Aligned_cols=74  Identities=11%  Similarity=0.039  Sum_probs=50.9

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----CceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.||.|+ +++|++.++.+...|+ +|+.++++.++.+.++..+    ...+.+.++  ...+.+++.+.. |++|++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~-G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-GQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-SCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHc-CCCCEEEE
Confidence            6788987 7999999999999999 9999999888777765532    222332222  233334444333 47999998


Q ss_pred             cCC
Q 019535          230 CVG  232 (339)
Q Consensus       230 ~~g  232 (339)
                      ++|
T Consensus        78 NAg   80 (252)
T d1zmta1          78 NDI   80 (252)
T ss_dssp             ECC
T ss_pred             CCc
Confidence            765

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.01  Score=44.90  Aligned_cols=101  Identities=16%  Similarity=0.224  Sum_probs=69.8

Q ss_pred             hHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh
Q 019535          141 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       141 ~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      +.++.+..++ -.|++++|+|-|-+|+..++.++.+|+ +|++++.+|-+.-.+.--|.. +.        .+.+.+   
T Consensus        11 ~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~--------~~~~a~---   77 (163)
T d1li4a1          11 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT--------TMDEAC---   77 (163)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHT---
T ss_pred             HHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee--------ehhhhh---
Confidence            3345555553 478999999999999999999999999 999999988654444333432 21        222222   


Q ss_pred             cCCCccEEEEcCCCHH-HHHHHHHHhhcCCcEEEEeccC
Q 019535          220 TDGGADYCFECVGLAS-LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~~-~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        ...|+++-++|+.. .-.+-++.|+++ -.+...|..
T Consensus        78 --~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf  113 (163)
T d1li4a1          78 --QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF  113 (163)
T ss_dssp             --TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS
T ss_pred             --hhccEEEecCCCccchhHHHHHhccCC-eEEEEeccc
Confidence              24799999999743 356788889886 555555543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.53  E-value=0.0056  Score=50.59  Aligned_cols=79  Identities=27%  Similarity=0.316  Sum_probs=53.1

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-e--EEeCCCCCCccHHHHHHHhcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-E--FVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--ga~-~--vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .|+++||.|+ +++|++.++.+...|+ +|+.+++++++.+.+.+    .  +.. .  ..|..+  .+++.+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            4778999987 8999999999999999 99999999887665422    2  222 1  224333  2333333333222


Q ss_pred             --CCccEEEEcCCC
Q 019535          222 --GGADYCFECVGL  233 (339)
Q Consensus       222 --g~~d~v~d~~g~  233 (339)
                        |++|++++++|.
T Consensus        80 ~~G~iDiLVnnAG~   93 (258)
T d1iy8a_          80 RFGRIDGFFNNAGI   93 (258)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCCEEEECCcc
Confidence              479999998873

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0054  Score=51.79  Aligned_cols=80  Identities=16%  Similarity=0.234  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc--------CCce-E--EeCCCCCCccHHHHHH
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF--------GVTE-F--VNSKNCGDKSVSQIII  217 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~--------ga~~-v--i~~~~~~~~~~~~~l~  217 (339)
                      -.|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++        +... .  .|..+  .+++.+.+.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~   86 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLVK   86 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHHH
Confidence            46889999987 8999999999999999 9999999987765442 11        2221 1  23333  223333333


Q ss_pred             HhcC--CCccEEEEcCCC
Q 019535          218 DMTD--GGADYCFECVGL  233 (339)
Q Consensus       218 ~~~~--g~~d~v~d~~g~  233 (339)
                      +...  |++|++++++|.
T Consensus        87 ~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHhCCeEEEEeeccc
Confidence            3222  379999998875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.50  E-value=0.0045  Score=51.27  Aligned_cols=79  Identities=20%  Similarity=0.197  Sum_probs=51.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHH----HHHhcCCceE---EeCCCCCCccHHHHHHHhcC-
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVTEF---VNSKNCGDKSVSQIIIDMTD-  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~----~~~~~ga~~v---i~~~~~~~~~~~~~l~~~~~-  221 (339)
                      .|+++||.|+ +++|.+.++.+...|+ +|+.+.++.+ ..+    .+++.|....   .|..+  .+++.+.+.+... 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5788899987 8999999999999999 9999998754 333    3344554322   23333  1223222332221 


Q ss_pred             -CCccEEEEcCCC
Q 019535          222 -GGADYCFECVGL  233 (339)
Q Consensus       222 -g~~d~v~d~~g~  233 (339)
                       |++|++++++|.
T Consensus        83 ~G~iDiLVnnAG~   95 (261)
T d1geea_          83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEeecccee
Confidence             479999998875

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.50  E-value=0.015  Score=51.01  Aligned_cols=106  Identities=21%  Similarity=0.293  Sum_probs=70.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-----------C----CceEEeCCCCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----------G----VTEFVNSKNCG  208 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-----------g----a~~vi~~~~~~  208 (339)
                      +++.+++++++++|-+|+| .|..+.++|+..|++++++++.++...+.+++.           |    ........+..
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            5677899999999999998 499999999999987899999999877776431           1    11121111101


Q ss_pred             CccHHHHHHHhcCCCccEEEEc-C-CC---HHHHHHHHHHhhcCCcEEEEec
Q 019535          209 DKSVSQIIIDMTDGGADYCFEC-V-GL---ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~-~-g~---~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..+......    ..+|+++-. . -.   ...+.++.+.|++| |++|..-
T Consensus       287 ~~~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hcccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            112211111    147888742 2 11   23377888899998 9998864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.50  E-value=0.003  Score=52.73  Aligned_cols=79  Identities=25%  Similarity=0.256  Sum_probs=53.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC--c----eEEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T----EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga--~----~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.  .    ...|..+  .+++.+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence            4778899987 8999999999999999 9999999988776653    2332  1    1223333  122333333322


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  |++|++++++|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence            2  479999998764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.47  E-value=0.0087  Score=47.29  Aligned_cols=110  Identities=19%  Similarity=0.183  Sum_probs=70.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      -.|.+|+|+|-|.+|..+++++...|+ +|++.+.++++.+....+|...+ ..+     +       +..-..|+.+=|
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~-------~~~~~~DI~iPc   90 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----D-------VLSTPCDVFAPC   90 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----G-------GGGCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----c-------cccccceeeecc
Confidence            368999999999999999999999999 99999999998888888886432 211     1       122268888876


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccH-HHHhhcCCeEEe
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMG  279 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~i~~  279 (339)
                      ..+...-+...+.++-   + +.++..+++ ..+-.. ..+..|++.+..
T Consensus        91 A~~~~I~~~~a~~i~a---k-~i~e~AN~p-~~~~~~~~~L~~rgI~~iP  135 (201)
T d1c1da1          91 AMGGVITTEVARTLDC---S-VVAGAANNV-IADEAASDILHARGILYAP  135 (201)
T ss_dssp             SCSCCBCHHHHHHCCC---S-EECCSCTTC-BCSHHHHHHHHHTTCEECC
T ss_pred             cccccccHHHHhhhhh---h-eeeccCCCC-cchhhHHHHhcccceEEEe
Confidence            6554434445555543   3 334443221 111112 234566676654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.47  E-value=0.0052  Score=50.60  Aligned_cols=81  Identities=17%  Similarity=0.317  Sum_probs=51.5

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      .|+++||.|+ |  ++|.+.++.+...|+ +|+.+.++++..+.++    ..+....+..+-...+++.+.+.+..  -+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            5788999987 5  799999999999999 8998888766554443    23433343332211222222222222  14


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ++|+++++++.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.46  E-value=0.01  Score=48.30  Aligned_cols=96  Identities=18%  Similarity=0.280  Sum_probs=66.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~~  218 (339)
                      +.......+.++||-+|+|. |..+..+++ .|+ +|++++.+++..+.+++.    +. ..++..+-          .+
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~----------~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV----------LE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG----------GG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehhh----------hh
Confidence            44555677788999999875 788887776 588 899999999988887653    32 12332221          12


Q ss_pred             hcCC-CccEEEEcCCC---------HHHHHHHHHHhhcCCcEEEE
Q 019535          219 MTDG-GADYCFECVGL---------ASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       219 ~~~g-~~d~v~d~~g~---------~~~~~~~~~~l~~~~G~~v~  253 (339)
                      +... .||+|+...+.         ...++.+.+.|+++ |.++.
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2223 79998865322         13478899999997 98875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.46  E-value=0.0037  Score=51.77  Aligned_cols=79  Identities=23%  Similarity=0.275  Sum_probs=52.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-----HhcCCce---EEeCCCCCCccHHHHHHHhc--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVTE---FVNSKNCGDKSVSQIIIDMT--  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----~~~ga~~---vi~~~~~~~~~~~~~l~~~~--  220 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|...   ..|..+  .+++.+.+.+..  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4788999987 8999999999999999 999999987765433     3345332   233333  222323332222  


Q ss_pred             CCCccEEEEcCCC
Q 019535          221 DGGADYCFECVGL  233 (339)
Q Consensus       221 ~g~~d~v~d~~g~  233 (339)
                      -|++|+++++.|.
T Consensus        85 ~g~iDilVnnAg~   97 (260)
T d1h5qa_          85 LGPISGLIANAGV   97 (260)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             hCCCcEecccccc
Confidence            2479999998874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0069  Score=50.44  Aligned_cols=99  Identities=18%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             CCEE-EEEcc-CHHHHHHHH-HHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHH---HHHHHh
Q 019535          153 GSTV-VIFGL-GSIGLAVAE-GARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVS---QIIIDM  219 (339)
Q Consensus       153 ~~~V-LI~G~-G~iG~~a~~-la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~---~~l~~~  219 (339)
                      |.+| ||.|+ +++|+++++ +++..|+ +|+.+++++++.+.+    ++.+.. .  .+|..+  .+...   +++.+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHHh
Confidence            5677 55587 899998876 5556688 999999998887654    233422 2  234333  12222   233332


Q ss_pred             cCCCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      . +++|++++++|..                         ...+.++..|+.. |+++.++.
T Consensus        79 ~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          79 Y-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             H-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             c-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            2 3799999988751                         1244556666776 99998865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.44  E-value=0.01  Score=45.69  Aligned_cols=93  Identities=12%  Similarity=0.029  Sum_probs=58.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC---CceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~g---a~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      ..++.+|+|+|+|+.+.+++..+...+. +|+.+.|+.++.+.+.+ +.   ....+..+.            .....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~~~~~~d   81 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------IPLQTYD   81 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CCCSCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc------------ccccccc
Confidence            3468899999999999999887776554 99999999988766533 32   222232221            1113689


Q ss_pred             EEEEcCCCHHH---HHHHHHHhhcCCcEEEEecc
Q 019535          226 YCFECVGLASL---VQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       226 ~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++|+|++....   .......+.++ ..++++-.
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~vy  114 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLG-SAFYDMQY  114 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHC-SCEEESCC
T ss_pred             eeeecccccccccccchhhhhhccc-ceeeeeec
Confidence            99999875321   11223445565 66666644

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.44  E-value=0.0062  Score=49.19  Aligned_cols=105  Identities=15%  Similarity=0.221  Sum_probs=70.9

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh-
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM-  219 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~-  219 (339)
                      ...+....++||-+|++ +|..++.+|+.+.. .+++.++.+++..+.+++    .|...-+....   .+..+.+.++ 
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~  128 (227)
T d1susa1          53 MLLKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMI  128 (227)
T ss_dssp             HHHHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred             HHHHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHH
Confidence            33445567899999975 58888899988742 299999999988777754    46432222222   3445555444 


Q ss_pred             ----cCCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535          220 ----TDGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       220 ----~~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                          ..+.||.|| |+--.  ...++.+++.|+++ |.++.=.
T Consensus       129 ~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN  170 (227)
T d1susa1         129 KDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  170 (227)
T ss_dssp             HCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred             hccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence                234799998 65543  34488999999997 8776643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0024  Score=43.86  Aligned_cols=35  Identities=31%  Similarity=0.326  Sum_probs=31.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++|+|+|.|..|+++++++...|+ +|++.+...
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            46789999999999999999999999 899998754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.35  E-value=0.014  Score=48.00  Aligned_cols=81  Identities=15%  Similarity=0.161  Sum_probs=52.3

Q ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-------HHHHHhcCCce-E--EeCCCCCCccHHHHH-H
Q 019535          150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVTE-F--VNSKNCGDKSVSQII-I  217 (339)
Q Consensus       150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~~ga~~-v--i~~~~~~~~~~~~~l-~  217 (339)
                      .+++.++||.|+ |++|++.++.+...|++.|+.+.++..+       .+.++..|... +  .|..+   .+-.+.+ .
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d---~~~~~~~~~   82 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD---RESVRELLG   82 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC---HHHHHHHHH
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch---HHHHHHhhc
Confidence            578889999987 8999999998888898667777665321       22334456532 2  23333   3333333 3


Q ss_pred             HhcCC-CccEEEEcCCC
Q 019535          218 DMTDG-GADYCFECVGL  233 (339)
Q Consensus       218 ~~~~g-~~d~v~d~~g~  233 (339)
                      +.... ++|.++++.|.
T Consensus        83 ~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          83 GIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             ccccccccccccccccc
Confidence            33333 78999998875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.35  E-value=0.012  Score=47.53  Aligned_cols=102  Identities=16%  Similarity=0.223  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhc
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      +...+++|++||=+|+|+ |..+..+|+..|.. +|++++.+++..+.+++.    +....+..+.   ... +.. ...
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~---~~~-~~~-~~~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKP-EEY-RAL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCG-GGG-TTT
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC---CCc-ccc-ccc
Confidence            456799999999999874 88888999988643 899999999888777542    3222222222   111 111 111


Q ss_pred             CCCccEEEEcCCC----HHHHHHHHHHhhcCCcEEEEe
Q 019535          221 DGGADYCFECVGL----ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       221 ~g~~d~v~d~~g~----~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ...+|++|..+..    ...++.+.+.|+++ |++++.
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            1368888854432    23478888999997 988775

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.28  E-value=0.0092  Score=49.09  Aligned_cols=76  Identities=18%  Similarity=0.154  Sum_probs=51.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--DGGA  224 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--~g~~  224 (339)
                      .+||.|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|... .  .|..+  .+++.+.+.+..  -|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTTCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            4588887 8999999999989999 999999998876654    3345332 2  33333  222333333322  2479


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |++++++|.
T Consensus        80 DilVnnAG~   88 (255)
T d1gega_          80 DVIVNNAGV   88 (255)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecccc
Confidence            999998875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.27  E-value=0.0048  Score=51.14  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC--c--e--EEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T--E--FVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga--~--~--vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.  .  .  ..|..+  .+++.+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            4678888887 8999999999999999 9999999988776553    2331  1  1  223333  122333333322


Q ss_pred             C--CCccEEEEcCCC
Q 019535          221 D--GGADYCFECVGL  233 (339)
Q Consensus       221 ~--g~~d~v~d~~g~  233 (339)
                      .  |++|++++++|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHhCCCCEeeccccc
Confidence            2  479999998874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.26  E-value=0.018  Score=43.19  Aligned_cols=82  Identities=23%  Similarity=0.206  Sum_probs=56.4

Q ss_pred             EEEEEccCHHHHHHHH-HHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAE-GARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~-la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|.++|+|.+|.+.++ |+++-+. +|++.++++++.+.+++ +|.. +.+..+    ..         ...|+||=|+.
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~~~~~~-~~~~~~----~v---------~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE-TSATLP----EL---------HSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE-EESSCC----CC---------CTTSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhhhcccc-cccccc----cc---------cccceEEEecC
Confidence            5889999999998877 4454335 99999999998888765 5653 333222    11         14699998887


Q ss_pred             CHHHHHHHHHHhhcCCcEEEE
Q 019535          233 LASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       233 ~~~~~~~~~~~l~~~~G~~v~  253 (339)
                      - ..+...++-+.+. +.++.
T Consensus        67 P-~~~~~v~~~l~~~-~~~vi   85 (152)
T d1yqga2          67 P-QDMEAACKNIRTN-GALVL   85 (152)
T ss_dssp             H-HHHHHHHTTCCCT-TCEEE
T ss_pred             H-HHHHHhHHHHhhc-ccEEe
Confidence            4 3377777777765 55443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.24  E-value=0.021  Score=46.54  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=61.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGG  223 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~  223 (339)
                      .+||.|+ +++|++.++.+...|+ +|+.++ ++++..+.+    ++.|.. ..  .|..+  .+++.+.+.+..  -|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence            4677787 8999999999999999 887764 455555444    345532 22  23333  222333333222  247


Q ss_pred             ccEEEEcCCCH-------------------------HHHHHHHHHh--hcCCcEEEEeccC
Q 019535          224 ADYCFECVGLA-------------------------SLVQEAYACC--RKGWGKTIVLGVD  257 (339)
Q Consensus       224 ~d~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~  257 (339)
                      +|++++++|..                         ...+.+++.|  +.+ |++|.++..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcCh
Confidence            99999988751                         1245556655  454 999999753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.23  E-value=0.0037  Score=51.60  Aligned_cols=105  Identities=11%  Similarity=0.053  Sum_probs=63.2

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCc-cHHHHHHHhcC--
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDK-SVSQIIIDMTD--  221 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~-~~~~~l~~~~~--  221 (339)
                      .+++|||.|+ +++|.+++......|+ +|+.+.++.++.+.+.+    .+...  .+..+...+. .+.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4789999987 8999999999999999 77777766655444432    22211  1222210011 23332333222  


Q ss_pred             CCccEEEEcCCCH-----------------HHHHHHHHHhh-----cCCcEEEEeccCC
Q 019535          222 GGADYCFECVGLA-----------------SLVQEAYACCR-----KGWGKTIVLGVDQ  258 (339)
Q Consensus       222 g~~d~v~d~~g~~-----------------~~~~~~~~~l~-----~~~G~~v~~g~~~  258 (339)
                      +++|++++++|..                 ...+.+++.+.     .. |+++.++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~~  140 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSVT  140 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEechh
Confidence            3799999999861                 12445555553     23 8888886543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.03  Score=47.76  Aligned_cols=104  Identities=14%  Similarity=0.175  Sum_probs=70.1

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----------cC----CceEEeCCCCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----------FG----VTEFVNSKNCG  208 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----------~g----a~~vi~~~~~~  208 (339)
                      +.+..+++++++||-+|+| .|..+.++|+..+++++++++.+++..+.+++           +|    ...++..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            5677889999999999987 48889999999998789999999987766643           12    112332221 1


Q ss_pred             CccHHHHHHHhcCCCccEEEEc-CC-CH---HHHHHHHHHhhcCCcEEEEec
Q 019535          209 DKSVSQIIIDMTDGGADYCFEC-VG-LA---SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~-~g-~~---~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ..++.+.+..     +|+|+-. .- .+   ..+.+.++.|+++ |++|..-
T Consensus       221 ~~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             SHHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             ccccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            1333333322     5788732 21 12   3366788889997 9998764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.15  E-value=0.0076  Score=50.59  Aligned_cols=98  Identities=17%  Similarity=0.193  Sum_probs=68.6

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---------C-ceEEeCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---------V-TEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---------a-~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...++|||+|+|. |..+-.+++..+.++|.+++.+++-.+.++++-         . ..++.      .+-.+.+++..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence            4567999998653 555667777777768999999998888887632         1 12222      34556666655


Q ss_pred             CCCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+.+|+|| |+..         +.+-++.+.++|+++ |.++.-..
T Consensus       152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            55899987 5543         234488999999998 98887653

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.13  E-value=0.037  Score=44.85  Aligned_cols=102  Identities=16%  Similarity=0.152  Sum_probs=63.3

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCC------EEEEEcCChhHHHHHH----hcCCce-E--EeCCCCCCccHHHHHHHhc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGAT------RIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~------~Vi~~~~~~~~~~~~~----~~ga~~-v--i~~~~~~~~~~~~~l~~~~  220 (339)
                      .|||.|+ +++|++.++.+...|++      .|+..++++++.+.+.    +.|... .  .|..+  .+++.+.+.+..
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence            4688887 89999999988888983      2888898888766553    344322 2  23333  222323232222


Q ss_pred             --CCCccEEEEcCCCH-------------------------HHHHHHHHHhhc-CCcEEEEeccCC
Q 019535          221 --DGGADYCFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGVDQ  258 (339)
Q Consensus       221 --~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~  258 (339)
                        -|++|+++++.|..                         ...+.++..|.. ++|+++.++...
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  146 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA  146 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence              24799999988751                         124455555532 138999987543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.11  E-value=0.032  Score=42.16  Aligned_cols=89  Identities=17%  Similarity=0.198  Sum_probs=61.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      .+|.++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.++...        .+..+.+.     ..|+++-|+..
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~diii~~v~~   67 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAVQ-----GADVVISMLPA   67 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHHT-----SCSEEEECCSC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc--------chhhhhcc-----ccCeeeecccc
Confidence            368999999999988887888899 99999999999988888775321        12222221     36888888887


Q ss_pred             HHHHHHH-------HHHhhcCCcEEEEeccC
Q 019535          234 ASLVQEA-------YACCRKGWGKTIVLGVD  257 (339)
Q Consensus       234 ~~~~~~~-------~~~l~~~~G~~v~~g~~  257 (339)
                      ....+..       ...+.++ -.++.++..
T Consensus        68 ~~~~~~v~~~~~~~~~~l~~g-~iiid~st~   97 (162)
T d3cuma2          68 SQHVEGLYLDDDGLLAHIAPG-TLVLECSTI   97 (162)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEECSCC
T ss_pred             hhhHHHHHhccccccccCCCC-CEEEECCCC
Confidence            6655443       3345554 555556543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.10  E-value=0.016  Score=43.46  Aligned_cols=85  Identities=13%  Similarity=0.098  Sum_probs=61.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|.++|+|.+|.+.+.-....|. ++++..+++++.+.+ +++|....        .+..+.+.     ..|+||-|+.-
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~--------~~~~~~~~-----~~dvIilavkp   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA--------MSHQDLID-----QVDLVILGIKP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC--------SSHHHHHH-----TCSEEEECSCG
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee--------chhhhhhh-----ccceeeeecch
Confidence            57899999999988886666787 899999998887776 55675422        12333332     37999999865


Q ss_pred             HHHHHHHHHHhhcCCcEEEEec
Q 019535          234 ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       234 ~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .. ++..++.+.++ ..++.+.
T Consensus        68 ~~-~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          68 QL-FETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             GG-HHHHHTTSCCC-SCEEECC
T ss_pred             Hh-HHHHhhhcccc-eeEeccc
Confidence            44 77888888886 6666553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.08  E-value=0.0015  Score=53.47  Aligned_cols=75  Identities=20%  Similarity=0.193  Sum_probs=50.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcC--CCccEEE
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  228 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~--g~~d~v~  228 (339)
                      .++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+..    ...|..+  .+++.+.+.+...  +++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence            5788999987 8999999999999999 99999988765433211    2234433  1223333332222  3799999


Q ss_pred             EcCCC
Q 019535          229 ECVGL  233 (339)
Q Consensus       229 d~~g~  233 (339)
                      +++|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            98875

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.016  Score=46.70  Aligned_cols=108  Identities=12%  Similarity=0.024  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCce------------EEeCCCCCC--
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE------------FVNSKNCGD--  209 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~------------vi~~~~~~~--  209 (339)
                      .....+.++.+||..|+|. |..+..+|+ .|+ +|++++.+++..+.+++. +...            .........  
T Consensus        38 ~~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  114 (229)
T d2bzga1          38 DTFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISL  114 (229)
T ss_dssp             HHHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEE
T ss_pred             HHhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEE
Confidence            3445678899999999875 788888876 699 999999999998887652 2110            000000000  


Q ss_pred             --ccHHHHHHHhcCCCccEEEEcCCC--------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          210 --KSVSQIIIDMTDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       210 --~~~~~~l~~~~~g~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        .++.+ +.....+.+|+|+++.--        ...++.+.++|+++ |++++....
T Consensus       115 ~~~d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~~  170 (229)
T d2bzga1         115 YCCSIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVLS  170 (229)
T ss_dssp             EESCGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEEE
T ss_pred             EEcchhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEcc
Confidence              01100 001112378999985431        23478899999998 998777543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.02  E-value=0.012  Score=47.63  Aligned_cols=101  Identities=12%  Similarity=0.122  Sum_probs=65.5

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcC
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      +...+++|++||-+|+|. |..+..+|+.....+|++++.+++..+.+++.    +....+..+.   ....    ....
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~---~~~~----~~~~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQ----EYAN  139 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGG----GGTT
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEee---ccCc----cccc
Confidence            456789999999999874 77788888865444999999999988877653    2222232222   1111    1111


Q ss_pred             C--CccEEEEcCCC----HHHHHHHHHHhhcCCcEEEEec
Q 019535          222 G--GADYCFECVGL----ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       222 g--~~d~v~d~~g~----~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .  .+|+++.....    ...+.++...|+++ |.+++.-
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~~  178 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIAI  178 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEEe
Confidence            2  45566654432    23377888899997 9887763

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.01  E-value=0.0025  Score=53.77  Aligned_cols=99  Identities=13%  Similarity=0.097  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-----eEEeCCCCCCccHHHHH
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-----EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~-----~vi~~~~~~~~~~~~~l  216 (339)
                      ...+.+.+.+||-+|+|. |..++.+++. |+ +|++++.+++.++.+++.    +..     ..+..     .++...-
T Consensus        50 ~~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  121 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLD  121 (292)
T ss_dssp             HHHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHH
T ss_pred             HHhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----ccccccc
Confidence            334455678999999874 7888888875 88 999999999988877542    211     11111     1121111


Q ss_pred             HHhcCC-CccEEEEcCCC--------------HHHHHHHHHHhhcCCcEEEE
Q 019535          217 IDMTDG-GADYCFECVGL--------------ASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       217 ~~~~~g-~~d~v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~  253 (339)
                      ...... .+|.|+.....              ...++.+.+.|+++ |.++.
T Consensus       122 ~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         122 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            233333 79999854321              12588999999998 98876

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.99  E-value=0.019  Score=45.55  Aligned_cols=93  Identities=17%  Similarity=0.234  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHHhcCCCc
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDGGA  224 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~  224 (339)
                      ++++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++    .+. ...+..+.   .++     ....+.+
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~~~~~f  103 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SFEDKTF  103 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CSCTTCE
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cccCcCc
Confidence            56889999999874 778888876 477 99999999998887764    232 22232222   111     1122379


Q ss_pred             cEEEEcCC-----C---HHHHHHHHHHhhcCCcEEEEe
Q 019535          225 DYCFECVG-----L---ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       225 d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      |+|+-...     .   ...++.+.+.|+++ |++++.
T Consensus       104 D~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         104 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            99875322     1   12478899999998 998765

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.0039  Score=47.49  Aligned_cols=86  Identities=10%  Similarity=0.158  Sum_probs=55.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-----eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-----EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-----~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+..+..+..     ..+....      .+.+     +.+|++|-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~~D~iii   69 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAND------PDFL-----ATSDLLLV   69 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESC------HHHH-----HTCSEEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccch------hhhh-----cccceEEE
Confidence            68999999999999988888999 999999987655443332211     1111111      2222     15899999


Q ss_pred             cCCCHHHHHHHHHHh----hcCCcEEEEe
Q 019535          230 CVGLASLVQEAYACC----RKGWGKTIVL  254 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l----~~~~G~~v~~  254 (339)
                      ++.... .+.+++.+    .++ ..++.+
T Consensus        70 ~vka~~-~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          70 TLKAWQ-VSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             CSCGGG-HHHHHHHHHTTSCTT-SCEEEE
T ss_pred             eecccc-hHHHHHhhccccCcc-cEEeec
Confidence            998766 44444444    343 445554

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.93  E-value=0.061  Score=40.40  Aligned_cols=92  Identities=21%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             CEEEEEccCHHHH-HHHHHHHHcCCCEEEEEcC-Chh--HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEE
Q 019535          154 STVVIFGLGSIGL-AVAEGARLCGATRIIGVDV-ISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  228 (339)
Q Consensus       154 ~~VLI~G~G~iG~-~a~~la~~~G~~~Vi~~~~-~~~--~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~  228 (339)
                      -+|.|+|+|.+|. ..+++++....-++++++. +++  ...+++++|.....        ...+.+.+...- ++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            4789999999987 4667877664436767653 433  35677788865321        223334333322 699999


Q ss_pred             EcCCCHHHHHHH--HHHhhcCCcE-EEEec
Q 019535          229 ECVGLASLVQEA--YACCRKGWGK-TIVLG  255 (339)
Q Consensus       229 d~~g~~~~~~~~--~~~l~~~~G~-~v~~g  255 (339)
                      .+++.....+..  .+.+..  |. +++..
T Consensus        77 ~ATpag~h~~~~~~~~aa~~--G~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKP--GIRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCT--TCEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHc--CCEEEEcc
Confidence            998865434433  333444  55 44443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.90  E-value=0.2  Score=36.90  Aligned_cols=96  Identities=15%  Similarity=0.021  Sum_probs=61.3

Q ss_pred             CEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-C-ccEEEEc
Q 019535          154 STVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G-ADYCFEC  230 (339)
Q Consensus       154 ~~VLI~G-~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~-~d~v~d~  230 (339)
                      .+|.|+| .|.+|...+..++..|+ .|.+.++++.........+++.++....  .....+.+.+.... . =.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5899999 69999999999999999 8999999877665555556666655443  24444445444432 2 2477787


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEe
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .+........+....+  .+++..
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v~~  108 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVLGL  108 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEEEe
Confidence            7654333333333333  355433

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.89  E-value=0.032  Score=43.77  Aligned_cols=87  Identities=18%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...+++++.+|+ +|++.++........  .+..      -   .++.+.+.+     .|+++-+.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~------~---~~l~~~l~~-----sDii~~~~  104 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY------V---DSLDDLYKQ-----ADVISLHV  104 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB------C---SCHHHHHHH-----CSEEEECS
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee------e---ccccccccc-----cccccccC
Confidence            47899999999999999999999999 999998765433221  1211      1   244444433     68888776


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +- +.    .-...++.|+++ ..+|.++.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         105 PDVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CccccccccccHHHHhhhCCc-cEEEecCc
Confidence            53 21    124667888886 77777753

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.83  E-value=0.015  Score=46.31  Aligned_cols=102  Identities=14%  Similarity=0.076  Sum_probs=66.2

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ...+++|++||-+|+|+ |..+..+++..+..+|++++.+++..+.+++    .+-...+..+.   .+. ... .....
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~---~~~-~~~-~~~~~  124 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKP-WKY-SGIVE  124 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCG-GGT-TTTCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeec---cCc-ccc-ccccc
Confidence            46789999999999874 7788888888875599999999988877643    33222222222   111 000 11111


Q ss_pred             CccEEEEcCCC----HHHHHHHHHHhhcCCcEEEEec
Q 019535          223 GADYCFECVGL----ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       223 ~~d~v~d~~g~----~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+|+++....-    ...+.++.+.|+++ |.++..-
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            57777754432    23477888999997 9987763

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.71  E-value=0.014  Score=48.29  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=50.8

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH---hcC-CceEEeCCCCCCccHHHHHHHhc--CC
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK---RFG-VTEFVNSKNCGDKSVSQIIIDMT--DG  222 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~---~~g-a~~vi~~~~~~~~~~~~~l~~~~--~g  222 (339)
                      +|+++||.|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   +.+ ...+...+.....+..+.+.+..  -+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5889999985 5  699999999999999 9999998865444443   222 22222222211122333332222  24


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|+++.+.+.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999988774

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.67  E-value=0.0069  Score=43.45  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=34.2

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ...++..++|+|+|+|.+|.=+++.++.+|. +|..+.+.+
T Consensus        16 ~~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          16 FFNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             HTTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             HhccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            3345567899999999999999999999999 999998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.65  E-value=0.019  Score=46.87  Aligned_cols=77  Identities=14%  Similarity=0.191  Sum_probs=49.2

Q ss_pred             CEEEEEcc-CHHHHHHHHHHH---HcCCCEEEEEcCChhHHHHHHh----cCCceE--EeCCCCCCccHHH---HHHHhc
Q 019535          154 STVVIFGL-GSIGLAVAEGAR---LCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQ---IIIDMT  220 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~---~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v--i~~~~~~~~~~~~---~l~~~~  220 (339)
                      ++|||.|+ +++|.+.++.+.   ..|+ +|+.+++++++.+.+++    .+...+  +|..+  .+...+   .+++..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence            47999987 899999886553   3578 99999999887655543    222222  33333  233333   333333


Q ss_pred             CC-CccEEEEcCCC
Q 019535          221 DG-GADYCFECVGL  233 (339)
Q Consensus       221 ~g-~~d~v~d~~g~  233 (339)
                      .. ++|+++++.|.
T Consensus        80 ~~~~iDiLvnNAg~   93 (248)
T d1snya_          80 KDQGLNVLFNNAGI   93 (248)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             hcCCcceEEeeccc
Confidence            33 89999998764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.51  E-value=0.037  Score=44.43  Aligned_cols=48  Identities=23%  Similarity=0.295  Sum_probs=40.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT  199 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~  199 (339)
                      -.+.+|+|+|-|.+|..+++++...|+ ++++++.++.+.+.+.. .|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            368899999999999999999999999 99999988888766643 5543

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.016  Score=46.47  Aligned_cols=105  Identities=15%  Similarity=0.155  Sum_probs=68.6

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID  218 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~  218 (339)
                      ....+....++||-+|++ .|..++.+|+.+  +. +|+.++.+++..+.+++    .|....+....   .+..+.+.+
T Consensus        52 ~~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~~  126 (219)
T d2avda1          52 ANLARLIQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDE  126 (219)
T ss_dssp             HHHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHH
T ss_pred             HHHHHccCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcchh
Confidence            344455667899999975 478888888876  34 99999999988777654    45332222222   344444433


Q ss_pred             h---c-CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535          219 M---T-DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       219 ~---~-~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +   . .+.||.|| |+--.  ...++.+++.|+++ |.++.=.
T Consensus       127 ~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn  169 (219)
T d2avda1         127 LLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  169 (219)
T ss_dssp             HHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence            3   2 33799998 54433  33488999999997 7766543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.42  E-value=0.017  Score=49.18  Aligned_cols=102  Identities=19%  Similarity=0.160  Sum_probs=64.2

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-CC-C
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-DG-G  223 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-~g-~  223 (339)
                      ++++++||-+++|. |..++.+|+ .|+++|++++.+++..+.+++    .|...-+....   .+..+.+..+. .+ .
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~---~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV---GSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHTTCC
T ss_pred             cCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee---chhhhhhHHHHhccCC
Confidence            57899999997642 334444443 477799999999998888754    45421111111   34445444432 33 8


Q ss_pred             ccEEEEcCCC---------------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          224 ADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       224 ~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ||+|+--.+.               ...+..+.++++++ |.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence            9999842221               22467778899997 998888654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.41  E-value=0.034  Score=45.34  Aligned_cols=81  Identities=15%  Similarity=0.210  Sum_probs=51.8

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcC--C
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G  222 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~--g  222 (339)
                      .++++||.|+ +  ++|.+.+..+...|+ +|+.+.++++..+.+++    .+....+..+.....+..+.......  +
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5889999986 5  689999999999999 89999988665554433    44443333333112222333333322  3


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999987654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.39  E-value=0.022  Score=44.55  Aligned_cols=98  Identities=18%  Similarity=0.248  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceE-EeCCCCCCccHHHHHHHhcCC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF-VNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v-i~~~~~~~~~~~~~l~~~~~g  222 (339)
                      ++...+.+||-+|+| .|..+..+++ .|+ +|++++.+++..+.+++    .+.+.+ +...+.....        ..+
T Consensus        26 ~~~~~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~~   94 (198)
T d2i6ga1          26 AKVVAPGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT--------FDG   94 (198)
T ss_dssp             HTTSCSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC--------CCC
T ss_pred             cccCCCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc--------ccc
Confidence            333344589999987 5888877775 588 99999999988887653    344321 1111100011        123


Q ss_pred             CccEEEEcC-----CC---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECV-----GL---ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .||+|+...     ..   ...++.+.++|+++ |.++.....
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~~  136 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAAM  136 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEEB
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            799998522     21   23577888899997 998887543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.038  Score=46.59  Aligned_cols=98  Identities=18%  Similarity=0.295  Sum_probs=56.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH---HhcCC---ceEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG---KRFGV---TEFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~~ga---~~vi~~~~~~~~~~~~~l~  217 (339)
                      +.+...+.++++||.+|+| .|..++.+|+ .|+++|++++.++......   ++.+.   ..++..+.   .++     
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~---~~l-----   96 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI---EEV-----   96 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT---TTS-----
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeH---HHh-----
Confidence            3344456789999999987 4666665555 5877999999887543322   23332   23343222   111     


Q ss_pred             HhcCCCccEEEE-cCCC----H----HHHHHHHHHhhcCCcEEE
Q 019535          218 DMTDGGADYCFE-CVGL----A----SLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       218 ~~~~g~~d~v~d-~~g~----~----~~~~~~~~~l~~~~G~~v  252 (339)
                      ......+|+|+. ..+.    .    ......-+.|+++ |+++
T Consensus        97 ~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          97 HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             cCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            111237999984 2222    1    2233344678997 8775

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.35  E-value=0.037  Score=41.57  Aligned_cols=98  Identities=20%  Similarity=0.273  Sum_probs=69.2

Q ss_pred             HHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +.+..+ +-.|++++|.|=|-+|.-.++-+|.+|+ +|+++..+|-+.-.+.--|. ++.        ...+.+     +
T Consensus        13 i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~--------~~~~a~-----~   77 (163)
T d1v8ba1          13 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV--------TLDEIV-----D   77 (163)
T ss_dssp             HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC--------CHHHHT-----T
T ss_pred             HHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC--------chhHcc-----c
Confidence            444444 3578999999999999999999999999 99999998855433322333 232        222222     2


Q ss_pred             CccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..|+++-++|+... -.+-++.|+++ ..+...|-.
T Consensus        78 ~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHf  112 (163)
T d1v8ba1          78 KGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHF  112 (163)
T ss_dssp             TCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             cCcEEEEcCCCCccccHHHHHHhhCC-eEEEecccc
Confidence            47999999998753 55778889986 665556544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.34  E-value=0.13  Score=38.09  Aligned_cols=96  Identities=23%  Similarity=0.264  Sum_probs=61.3

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEcCChh---HHHHHHhcCCceEEeCCCCCCccHHHHHH---------
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISE---KFEIGKRFGVTEFVNSKNCGDKSVSQIII---------  217 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~~~~~---~~~~~~~~ga~~vi~~~~~~~~~~~~~l~---------  217 (339)
                      ..+|.|+|+ |.+|..++++.+..  .+ +|++++....   -.+.++++....+.-.++    ...+.+.         
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~----~~~~~l~~~~~~~~~~   76 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP----SLYNDLKEALAGSSVE   76 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG----GGHHHHHHHTTTCSSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH----HHHHHHHHHhhhcccc
Confidence            468999997 99999999999886  46 7777765443   234456677666554433    2222222         


Q ss_pred             ---------HhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          218 ---------DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       218 ---------~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                               +.....+|+++.++.+...+.-.+.++..+  .-+.+.
T Consensus        77 v~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLA  121 (150)
T d1r0ka2          77 AAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALA  121 (150)
T ss_dssp             EEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEEC
T ss_pred             cccCccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEe
Confidence                     222225788888776666677777777774  444553

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.027  Score=46.53  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      ..++.+||-+|+|. |..+..+++.. +. ++++++.+++..+.+++.... ..+..+.   .++     .+..+.+|+|
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v  151 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAI  151 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCCCCCEEEE
Confidence            45678999999874 77777788776 55 899999999998888764322 2222121   111     1122379999


Q ss_pred             EEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          228 FECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       228 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +....-.. ++++.+.|+++ |.++....
T Consensus       152 ~~~~~~~~-~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         152 IRIYAPCK-AEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EEESCCCC-HHHHHHHEEEE-EEEEEEEE
T ss_pred             eecCCHHH-HHHHHHHhCCC-cEEEEEee
Confidence            96554444 78999999998 99888753

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.26  E-value=0.28  Score=37.30  Aligned_cols=137  Identities=13%  Similarity=0.057  Sum_probs=78.3

Q ss_pred             EEEEEccCHHHHH-HHHHHHHcCCC-EEEEE-cCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGLGSIGLA-VAEGARLCGAT-RIIGV-DVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~-a~~la~~~G~~-~Vi~~-~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|.|+|+|.+|.- .+...+..+-. +++++ ++++++.+. .++++...++       .++.+.+.   ...+|+|+-|
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~-------~~~~ell~---~~~id~v~I~   74 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF-------DSYEELLE---SGLVDAVDLT   74 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE-------SCHHHHHH---SSCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee-------eeeecccc---ccccceeecc
Confidence            6889999999864 46666655422 56654 555655554 4557766554       23333332   2379999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccc-ccHHHHhh-cCCe-EEeeecCCCCCCCcHHHHHHHHhCCCC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLH-SGKI-LMGSLFGGLKAKSDIPILLKRYMDKEL  303 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l  303 (339)
                      ++...-.+.+..++..  |.-|++.-+....... ..+..+.. ++.. ..++.....+....+.++.+++.+|++
T Consensus        75 tp~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          75 LPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            9887767777777776  5777775432211111 11222322 2333 344322111122357788888999866

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.25  E-value=0.015  Score=41.16  Aligned_cols=34  Identities=29%  Similarity=0.532  Sum_probs=31.0

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .+|.|+|+|.+|++.++-|+.+|. ++++.+.+++
T Consensus        12 ~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2          12 TRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             CEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            569999999999999999999999 9999987654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.25  E-value=0.028  Score=44.68  Aligned_cols=73  Identities=15%  Similarity=0.038  Sum_probs=46.4

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+|||.|+ |.+|...++.+...|.+ .|+.+.+++++.+.+.. +.. ++..+-   .+. +.+.+... ++|.|++++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~---~~~-~~~~~~~~-~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDI---TDA-DSINPAFQ-GIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCT---TSH-HHHHHHHT-TCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeee---ccc-cccccccc-cceeeEEEE
Confidence            58999987 99999999999888863 56777777776655432 232 222222   122 22233222 589999887


Q ss_pred             CC
Q 019535          232 GL  233 (339)
Q Consensus       232 g~  233 (339)
                      +.
T Consensus        77 ~~   78 (252)
T d2q46a1          77 SA   78 (252)
T ss_dssp             CC
T ss_pred             ee
Confidence            53

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.15  Score=42.24  Aligned_cols=100  Identities=21%  Similarity=0.221  Sum_probs=56.9

Q ss_pred             EEEEcc-CHHHHHHHHHHHHcCCC--EEEEEcCChhHHHH----HHhc---CCc-e--EEeCCCCCCccHHHHHHHhcCC
Q 019535          156 VVIFGL-GSIGLAVAEGARLCGAT--RIIGVDVISEKFEI----GKRF---GVT-E--FVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       156 VLI~G~-G~iG~~a~~la~~~G~~--~Vi~~~~~~~~~~~----~~~~---ga~-~--vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      |||.|+ +++|.+.++.+...|++  .|+.+.++.+..+.    ++++   +.. .  .+|..+  .+++.+.+.+...+
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~g   82 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTEG   82 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTCTTS
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhcccc
Confidence            466687 89999999999889983  23344444333322    2332   222 2  234433  23333333343345


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHh--hcCCcEEEEeccCC
Q 019535          223 GADYCFECVGLA-------------------------SLVQEAYACC--RKGWGKTIVLGVDQ  258 (339)
Q Consensus       223 ~~d~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~~  258 (339)
                      .+|+++++.|..                         ...+.++..|  +.. |++|.++...
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~-G~Iv~isS~~  144 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGS-GRVLVTGSVG  144 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEEEEGG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCC-CceEEEechh
Confidence            899999988751                         1244455555  344 8999987643

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=95.12  E-value=0.017  Score=47.96  Aligned_cols=97  Identities=14%  Similarity=0.142  Sum_probs=66.7

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-----CC-----ceEEeCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----GV-----TEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-----ga-----~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...++|||+|+|. |..+..+++..+.++|.+++.+++-.+.++++     ++     ..++.      .+..+.+++ +
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~------~D~~~~l~~-~  145 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV------DDGFMHIAK-S  145 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE------SCSHHHHHT-C
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe------chHHHHHhh-c
Confidence            4568999998754 56666777777777999999999988887663     21     12332      234455544 3


Q ss_pred             CCCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +..+|+|+ |...         +.+-++.+.++|+++ |.++.-..
T Consensus       146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~~  190 (274)
T d1iy9a_         146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD  190 (274)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEecC
Confidence            34899997 5432         234488899999998 98887643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.11  E-value=0.035  Score=46.79  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=46.3

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC--Ch---hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEE
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDV--IS---EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYC  227 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~--~~---~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v  227 (339)
                      +|||+|+ |-+|...++.+...|+ +|+++++  ..   ++.+.++..+--.++..+-   .+ .+.+.+...+ .+|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di---~~-~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI---RN-KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc---CC-HHHHHHHHHhcCCceE
Confidence            7999987 9999999998888899 8998863  12   2233344443223332221   11 2233444444 78999


Q ss_pred             EEcCCC
Q 019535          228 FECVGL  233 (339)
Q Consensus       228 ~d~~g~  233 (339)
                      |.++..
T Consensus        77 ih~aa~   82 (338)
T d1orra_          77 FHLAGQ   82 (338)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            998763

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.05  E-value=0.0096  Score=46.32  Aligned_cols=37  Identities=14%  Similarity=0.160  Sum_probs=31.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .+++|+|+|+|+.|+.++..++..|++.|.++++++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3678999999999999999999999855888887654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.05  E-value=0.08  Score=39.32  Aligned_cols=87  Identities=14%  Similarity=0.113  Sum_probs=53.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      +|.|+|.|.+|...+.-++..|. .|++..+++.+....+..+... .+..       .+.++     ..|+||-|+...
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-~~~~-------~e~~~-----~~diIi~~v~~~   67 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGV-TETS-------EEDVY-----SCPVVISAVTPG   67 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTC-EECC-------HHHHH-----TSSEEEECSCGG
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhcccc-cccH-------HHHHh-----hcCeEEEEecCc
Confidence            57899999999999999999999 8888887766655544333221 1211       11111     367888777766


Q ss_pred             HHHHHHHHHhhcCCcEEEEec
Q 019535          235 SLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       235 ~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ...+.+......-...+++++
T Consensus        68 ~~~~~~~~~~~~~~~~~id~s   88 (152)
T d1i36a2          68 VALGAARRAGRHVRGIYVDIN   88 (152)
T ss_dssp             GHHHHHHHHHTTCCSEEEECS
T ss_pred             hHHHHHHhhcccCCceeeccC
Confidence            645444444433213444443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.03  E-value=0.022  Score=46.19  Aligned_cols=89  Identities=13%  Similarity=0.148  Sum_probs=58.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhc-CCCc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT-DGGA  224 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~-~g~~  224 (339)
                      .++.+||-+|+|. |..+..+++ .|. +|++++.+++.++.+++    .+.. .++. .     ++    ..+. .+.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~-----d~----~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC-Q-----DI----SNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC-C-----CG----GGCCCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeec-c-----ch----hhhcccccc
Confidence            3457899999873 777777765 477 99999999998887754    3322 2332 1     21    1222 2389


Q ss_pred             cEEEEcCCC----------HHHHHHHHHHhhcCCcEEEE
Q 019535          225 DYCFECVGL----------ASLVQEAYACCRKGWGKTIV  253 (339)
Q Consensus       225 d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~  253 (339)
                      |+|+...+.          ...++.+.+.|+++ |.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999853221          12477888889997 98875

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.99  E-value=0.015  Score=41.48  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=31.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++++|+|+|.+|.=+++.+..+|. +|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            45789999999999999999999999 899888764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.96  E-value=0.012  Score=42.36  Aligned_cols=35  Identities=23%  Similarity=0.354  Sum_probs=31.3

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ..++++|+|+|.+|.=+++.+..+|. +|..+.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            45799999999999999999999999 899988754

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.95  E-value=0.052  Score=45.78  Aligned_cols=96  Identities=21%  Similarity=0.224  Sum_probs=65.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc------CC-----ceEEeCCCCCCccHHHHHHHh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV-----TEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~------ga-----~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ...++|||+|+|. |..+..+++.....+|.+++.+++-.+.++++      ++     ..++.      .+..+.+++ 
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh-
Confidence            4568999998764 56666777766555999999999888877653      11     12332      455666654 


Q ss_pred             cCCCccEEE-EcC---CC---------HHHHHHHHHHhhcCCcEEEEec
Q 019535          220 TDGGADYCF-ECV---GL---------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       220 ~~g~~d~v~-d~~---g~---------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +++.+|+|| |..   +.         .+-++.+.+.|+++ |.++.-.
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence            344899998 542   21         23468899999998 9887654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.87  E-value=0.06  Score=41.89  Aligned_cols=90  Identities=17%  Similarity=0.143  Sum_probs=58.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.++.|+|.|.+|+..+++++.+|. +|+..++...........+..   ..     .++.+.+.+     .|+|..+.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~---~~-----~~l~~ll~~-----sD~v~l~~  111 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQAT---FH-----DSLDSLLSV-----SQFFSLNA  111 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCE---EC-----SSHHHHHHH-----CSEEEECC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhccccc---cc-----CCHHHHHhh-----CCeEEecC
Confidence            47899999999999999999999999 899998765433332222221   11     234443333     57887655


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +- +.    .-+..++.|+++ ..+|.++.
T Consensus       112 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         112 PSTPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchHhheecHHHhhCcCCc-cEEEecCC
Confidence            42 21    123666777776 66666653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.85  E-value=0.012  Score=38.54  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=30.9

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      ++|.|+|+|-+|++.++-++.+|. ++.+.+.+++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            479999999999999999999999 89999876543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.021  Score=44.06  Aligned_cols=37  Identities=27%  Similarity=0.315  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ...+++|+|+|+|+.|+.|+..+...|. +|+..+..+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4557899999999999999999999999 999998765

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.79  E-value=0.23  Score=37.66  Aligned_cols=96  Identities=18%  Similarity=0.148  Sum_probs=62.7

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC-CCEEEEEcC-Ch-hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc----------C
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVDV-IS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT----------D  221 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~-~~-~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~----------~  221 (339)
                      +|.|.|-|-+|+..++.+.... . +++++.. ++ .....+..++.+......+    .. ....+..          .
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE----FI-PRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG----GH-HHHHHHTCCCSCBHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc----ce-eeecccCccccchhhhhh
Confidence            6899999999999888776543 4 6666643 22 3344556666543332111    11 1111110          1


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          222 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       222 g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .++|+|+||+|.-...+.+...+..+ -+.|.++..
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~  112 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE  112 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            26999999999887788888999997 888888764

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.75  E-value=0.0091  Score=47.94  Aligned_cols=94  Identities=18%  Similarity=0.187  Sum_probs=63.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHH---cCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARL---CGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ++++.+||-+|+|. |..+..+++.   .++ +|++++.+++.++.+++    .+..   .....+.          ...
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~----------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI----------RHV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT----------TTC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh----------hcc
Confidence            67889999999864 7777777775   467 99999999999888865    2321   2222111          111


Q ss_pred             cCCCccEEEEcCC--------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCFECVG--------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ....+|+++-...        -...++.+.+.|+++ |.++....
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~  148 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK  148 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence            1225677664322        124589999999998 99988754

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.75  E-value=0.036  Score=45.48  Aligned_cols=95  Identities=19%  Similarity=0.113  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhcC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+++|++||-.|+| +|..++.+|+.-++ +|++++.+++..+.+++    .|..   .++..+.          .++..
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~----------~~~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN----------RDFPG  171 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT----------TTCCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch----------HHhcc
Confidence            36789999999775 35566666765445 99999999998888754    3432   3443332          12233


Q ss_pred             C-CccEEE-EcC-CCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          222 G-GADYCF-ECV-GLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g-~~d~v~-d~~-g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      . .+|.|+ +.- .+...++.++..++++ |.+..+..
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence            3 789776 322 3344478899999997 88766543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.031  Score=43.62  Aligned_cols=39  Identities=23%  Similarity=0.351  Sum_probs=35.0

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      ++|.|+|+|.+|...++++...|+ +|+..+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 999999998876554

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.74  E-value=0.07  Score=44.79  Aligned_cols=97  Identities=12%  Similarity=0.119  Sum_probs=65.2

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--------c--eEEeCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--------T--EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--------~--~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...++|||+|+|. |..+-.+++....++|.+++.+++-.+.++++-.        .  .++.      .+..+.+++ +
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~-~  176 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  176 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHh-C
Confidence            4568999998764 5556677777776699999999998888877421        1  2221      355566654 4


Q ss_pred             CCCccEEE-EcCCC---------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DGGADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+.+|+|| |....         .+-++.+.++|+++ |.++.-+.
T Consensus       177 ~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         177 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            45899998 43221         22267888899997 99888754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.63  E-value=0.017  Score=41.15  Aligned_cols=35  Identities=20%  Similarity=0.302  Sum_probs=31.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++|+|+|+|.+|.=+++.++.+|. +|..+.+.+
T Consensus        20 ~p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            35789999999999999999999999 899988764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.60  E-value=0.051  Score=42.37  Aligned_cols=89  Identities=21%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .|.+|.|+|.|.+|...+++++.+|+ +|+..++..... .....+...+        .++.+.+..     .|+|.-+.
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~--------~~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc--------cchhhcccc-----CCEEEEee
Confidence            57899999999999999999999999 999998754432 2222332211        234333333     57887655


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +. +.    .-...++.|+++ ..+|.++.
T Consensus       113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            42 11    123456677775 66666653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.56  E-value=0.022  Score=46.31  Aligned_cols=35  Identities=17%  Similarity=0.122  Sum_probs=31.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999999999999999 999998754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.53  E-value=0.014  Score=42.00  Aligned_cols=34  Identities=12%  Similarity=0.039  Sum_probs=29.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .+++++|+|+|.+|+=.+++++.+|. +|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            45789999999999999999999999 78777654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.53  E-value=0.14  Score=39.56  Aligned_cols=98  Identities=14%  Similarity=0.149  Sum_probs=63.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC--c--eEEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T--EFVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga--~--~vi~~~~~~~~~~~~~  215 (339)
                      +.+.....++++||-+|+|. |..++.+++ .+. +|++++.++...+.+++    .+.  .  .++..+.      .+ 
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~------~~-  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL------YE-  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST------TT-
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch------hh-
Confidence            55667788999999998863 666666665 455 99999999988887754    232  1  2232221      11 


Q ss_pred             HHHhcCCCccEEEEcC----CC---HHHHHHHHHHhhcCCcEEEEe
Q 019535          216 IIDMTDGGADYCFECV----GL---ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       216 l~~~~~g~~d~v~d~~----g~---~~~~~~~~~~l~~~~G~~v~~  254 (339)
                        ...++.+|+|+-..    +.   ...++.+.+.|+++ |+++..
T Consensus       114 --~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         114 --NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             --TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             --hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence              11223799999532    21   22367788899997 987664

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.50  E-value=0.13  Score=39.26  Aligned_cols=43  Identities=12%  Similarity=0.098  Sum_probs=37.5

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  197 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g  197 (339)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~   45 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANE   45 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhc
Confidence            468899999999999888888999 8999999999988876654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.03  Score=45.46  Aligned_cols=46  Identities=33%  Similarity=0.315  Sum_probs=38.6

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV  198 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga  198 (339)
                      +|+++||.|+ +++|.+.++-+...|+ +|+.+++++++.+.+ ++++.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            5788999987 8999999999999999 899999988776654 45654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.44  E-value=0.022  Score=40.70  Aligned_cols=35  Identities=23%  Similarity=0.363  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++++|+|+|.+|.=.++.++.+|. +|..+.+.+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            46889999999999999999999999 888887653

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.11  Score=43.16  Aligned_cols=98  Identities=13%  Similarity=0.139  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----------CceEEeCCCCCCccHHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----------VTEFVNSKNCGDKSVSQIIIDM  219 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----------a~~vi~~~~~~~~~~~~~l~~~  219 (339)
                      ....++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-          -..++.      .|..+.+++ 
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhc-
Confidence            34668999998754 566667777766669999999998888886632          112322      344555544 


Q ss_pred             cCCCccEEE-EcCCC---------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          220 TDGGADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       220 ~~g~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+.+|+|| |....         .+-++.+.+.|+++ |.++.-+.
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            344899998 64421         22377888999997 99887654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.44  E-value=0.079  Score=43.22  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHH-HHH-HhcCCc---eEEeCCCC-CCccHHHHHHHhc
Q 019535          150 VEVGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKF-EIG-KRFGVT---EFVNSKNC-GDKSVSQIIIDMT  220 (339)
Q Consensus       150 ~~~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~-~~~ga~---~vi~~~~~-~~~~~~~~l~~~~  220 (339)
                      +-.|+++||.|+ |  ++|.+.++-+...|+ +|+.+.++.++. +.+ ++++..   ...|..+. ....+.+.+.+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            346889999984 4  599999999999999 899998877664 333 345532   22233320 0112334444433


Q ss_pred             CC--CccEEEEcCC
Q 019535          221 DG--GADYCFECVG  232 (339)
Q Consensus       221 ~g--~~d~v~d~~g  232 (339)
                      ..  .+|+++++++
T Consensus        82 ~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          82 GAGNKLDGVVHSIG   95 (268)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             ccCCCcceeeeccc
Confidence            32  7899999887

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.37  E-value=0.037  Score=43.08  Aligned_cols=79  Identities=14%  Similarity=0.138  Sum_probs=54.8

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-----------ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-----------TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-----------~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+|.|+|+|..|.+.+.++...|. +|..+.++++..+.+.+-+.           ..+.-+     .++.+.+.     
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t-----~~l~~a~~-----   76 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT-----SDVEKAYN-----   76 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE-----SCHHHHHT-----
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccc-----hhhhhccC-----
Confidence            369999999999999999888888 89999999988887754221           111111     12333332     


Q ss_pred             CccEEEEcCCCHHHHHHHHHHh
Q 019535          223 GADYCFECVGLASLVQEAYACC  244 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~~~~~~~l  244 (339)
                      ..|++|-+++... +...++.+
T Consensus        77 ~ad~iiiavPs~~-~~~~~~~~   97 (189)
T d1n1ea2          77 GAEIILFVIPTQF-LRGFFEKS   97 (189)
T ss_dssp             TCSCEEECSCHHH-HHHHHHHH
T ss_pred             CCCEEEEcCcHHH-HHHHHHHH
Confidence            4799999999776 55555543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.36  E-value=0.061  Score=38.22  Aligned_cols=43  Identities=21%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +.+.+...++++|+|+|+|.+|.=.+..++..|. +|..+.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            4455666788999999999999999999999999 898888764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.31  E-value=0.063  Score=41.64  Aligned_cols=89  Identities=16%  Similarity=0.088  Sum_probs=57.8

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...+++++.+|. +|+..++........+..+...   .     .++.+.++     ..|+|.-+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~~l~-----~sD~v~~~~  108 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTW---H-----ATREDMYP-----VCDVVTLNC  108 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHGG-----GCSEEEECS
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeeccccccccccccccc---c-----CCHHHHHH-----hccchhhcc
Confidence            57899999999999999999999999 9999997655554444444321   1     12222222     267776655


Q ss_pred             CCHH-----HHHHHHHHhhcCCcEEEEec
Q 019535          232 GLAS-----LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~~-----~~~~~~~~l~~~~G~~v~~g  255 (339)
                      +-..     .-...++.|+++ ..+|.++
T Consensus       109 plt~~T~~li~~~~l~~mk~g-a~lIN~a  136 (188)
T d2naca1         109 PLHPETEHMINDETLKLFKRG-AYIVNTA  136 (188)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred             cccccchhhhHHHHHHhCCCC-CEEEecC
Confidence            4211     134566677775 6666664

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=94.23  E-value=0.053  Score=44.24  Aligned_cols=102  Identities=13%  Similarity=-0.080  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCceEEeCCCCCCccHHHHHHHhc--C
Q 019535          145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDMT--D  221 (339)
Q Consensus       145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~~~~~l~~~~--~  221 (339)
                      +.......+.+||-+|+|. |..+..++..... .|.+++.+++..+.+++. .....++...   .++    .++.  .
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d~----~~~~~~~  156 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---ASM----ETATLPP  156 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SCG----GGCCCCS
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---ccc----cccccCC
Confidence            3445556788999999874 8888888877666 899999999999888763 2222222211   121    1222  2


Q ss_pred             CCccEEEEcC-----CCH---HHHHHHHHHhhcCCcEEEEecc
Q 019535          222 GGADYCFECV-----GLA---SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       222 g~~d~v~d~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.||+|+..-     ..+   ..++.+.+.|+++ |.+++...
T Consensus       157 ~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e~  198 (254)
T d1xtpa_         157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKEN  198 (254)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            3799998532     222   3478899999997 98887543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.17  E-value=0.073  Score=44.88  Aligned_cols=93  Identities=17%  Similarity=0.238  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH---HHhcCC---ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRFGV---TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~~ga---~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+.++++||-+|+|. |.+++.+|+ .|+++|++++.++.....   ++..+.   ..++..+.   .++     ....+
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC-----CCSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc-----ccccc
Confidence            456789999999874 666665555 687789999987643222   222332   23333222   111     11123


Q ss_pred             CccEEEE-cCCC--------HHHHHHHHHHhhcCCcEEE
Q 019535          223 GADYCFE-CVGL--------ASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       223 ~~d~v~d-~~g~--------~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+|+|+. ..+.        +..+....+.|+++ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            7899974 2321        23455667899997 8775

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.17  E-value=0.11  Score=43.25  Aligned_cols=97  Identities=15%  Similarity=0.146  Sum_probs=64.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---------C-ceEEeCCCCCCccHHHHHHHhc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---------V-TEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---------a-~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...++|||+|+|. |..+-.+++..+.++|.+++.+++-.+.++++-         . ..++.      .|..+.+++ +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhc-C
Confidence            4568999998754 455667777766668999999998888876632         0 12322      344555543 3


Q ss_pred             CCCccEEE-EcCC----------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DGGADYCF-ECVG----------LASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g~~d~v~-d~~g----------~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+.+|+|| |+..          +.+-++.+.+.|+++ |.++.-..
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            34899998 5432          133478899999998 98887653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.13  E-value=0.046  Score=46.56  Aligned_cols=45  Identities=22%  Similarity=0.227  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535          149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  194 (339)
Q Consensus       149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  194 (339)
                      -+.+|++|||+|+ |-+|...+..+...|+ +|++++++.++.+.++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            3567999999987 9999999988888899 9999999877766554

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.11  E-value=0.072  Score=44.02  Aligned_cols=96  Identities=15%  Similarity=0.182  Sum_probs=63.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-C---------------ceEEeCCCCCCccHH
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V---------------TEFVNSKNCGDKSVS  213 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a---------------~~vi~~~~~~~~~~~  213 (339)
                      ....++|||+|+|. |..+-.+++. +..+|.+++.+++-.+.++++- .               .+++.      .+..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~------~Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE------ChHH
Confidence            35678999998753 4444555554 4458999999998888887531 1               12332      3444


Q ss_pred             HHHHHhcCCCccEEE-EcCCC---------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          214 QIIIDMTDGGADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       214 ~~l~~~~~g~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.+++  .+.+|+|| |+...         .+-++.+.+.|+++ |.++.-+.
T Consensus       142 ~~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~~  191 (276)
T d1mjfa_         142 EFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQAG  191 (276)
T ss_dssp             HHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             HHHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEecC
Confidence            55543  34899998 55432         23378899999998 99887653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.09  E-value=0.1  Score=40.21  Aligned_cols=88  Identities=24%  Similarity=0.323  Sum_probs=58.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.++.|+|.|.+|+..+++++.+|+ +|++.++.....+. ...+.. .        .++.+.+.+     .|+|.-+.
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~-~--------~~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIE-L--------LSLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCE-E--------CCHHHHHHH-----CSEEEECC
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCce-e--------ccHHHHHhh-----CCEEEEcC
Confidence            57899999999999999999999999 99999876554433 233322 1        233333333     68888765


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +- +.    .-+..++.|+++ ..+|.++.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            53 21    123566677775 66666653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.07  E-value=0.027  Score=46.51  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=30.5

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +++|+|+|+|+.|++++..++..|. +|.+++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            4789999999999999999999999 999998653

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.04  E-value=0.45  Score=36.14  Aligned_cols=89  Identities=22%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHc-CCCEEEEE-cCChhHHHH-HHhcCCc---eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          155 TVVIFGLGSIGLAVAEGARLC-GATRIIGV-DVISEKFEI-GKRFGVT---EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~-~~~~~~~~~-~~~~ga~---~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ++.|+|+|.+|...++..+.. ++ +++++ ++++++.+. .++++..   .++       .++.+.+.   ...+|+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~iD~v~   71 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLE---DPEIDALY   71 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHH---CTTCCEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhh---ccccceee
Confidence            588999999998888877776 56 77765 555555444 3555532   232       23333332   22799999


Q ss_pred             EcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          229 ECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      -|++...-.+.+..++..  |.-|.+.-
T Consensus        72 I~tp~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             ecccchhhcchhhhhhhc--cceeeccc
Confidence            999988878888888887  56677754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.00  E-value=0.13  Score=35.01  Aligned_cols=70  Identities=17%  Similarity=0.223  Sum_probs=48.6

Q ss_pred             CCCCCEEEEEccCHHHHHH-HHHHHHcCCCEEEEEcCCh-hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535          150 VEVGSTVVIFGLGSIGLAV-AEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  227 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a-~~la~~~G~~~Vi~~~~~~-~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v  227 (339)
                      ++..+++.++|.|++|+.+ +++++..|+ .|.+.+... ...+.+++.|.......+.   ..+         .++|+|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i---------~~~d~v   71 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI---------EGASVV   71 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG---------TTCSEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC---------CCCCEE
Confidence            4567889999988888766 899999999 999998753 3456667788754433332   211         257888


Q ss_pred             EEcCC
Q 019535          228 FECVG  232 (339)
Q Consensus       228 ~d~~g  232 (339)
                      +-..+
T Consensus        72 V~S~A   76 (96)
T d1p3da1          72 VVSSA   76 (96)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            75544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.98  E-value=0.046  Score=42.05  Aligned_cols=38  Identities=26%  Similarity=0.297  Sum_probs=33.6

Q ss_pred             EEEEE-ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          155 TVVIF-GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       155 ~VLI~-G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      +|.|+ |+|.+|.+.++.+...|+ +|+...|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57888 569999999999999999 999999999887665

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.97  E-value=0.57  Score=38.46  Aligned_cols=57  Identities=19%  Similarity=0.239  Sum_probs=40.4

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEEe
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVN  203 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~  203 (339)
                      +...+.+..+|+...+|+.|++++..++.+|. +.+++..   ++.+.+.++.+|+.-++.
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~v  112 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGY-RMKLLMPDNMSQERRAAMRAYGAELILV  112 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEEEESCCCHHHHHHHHHTTCEEEEE
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCc-ceEeeeccCchhhhhHHHHHhCCCccee
Confidence            33445556665555779999999999999999 5444433   456778888899865443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.97  E-value=0.37  Score=35.56  Aligned_cols=96  Identities=25%  Similarity=0.234  Sum_probs=62.2

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhH---HHHHHhcCCceEEeCCCCCCccH---H------------
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKSV---S------------  213 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~---~~~~~~~ga~~vi~~~~~~~~~~---~------------  213 (339)
                      +|.|+|+ |.+|..++.+.+...  + +|++++-...-   .+.++++....++-.++   ...   .            
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~~   78 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTEV   78 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhcccccc
Confidence            6889997 999999999999873  5 67766544332   23345577666654433   111   1            


Q ss_pred             ----HHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          214 ----QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       214 ----~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                          +.+.++... .+|+|+.++.+...++-.+..+..+  +-+.+..
T Consensus        79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLAN  124 (151)
T d1q0qa2          79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLAN  124 (151)
T ss_dssp             EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEECC
T ss_pred             ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEEc
Confidence                123333333 6888888887777788888888884  5555543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.92  E-value=0.019  Score=41.37  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=32.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      +.+++++|+|+|.+|+=+++..+.+|. +|..+.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            346899999999999999999999999 9999987643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.89  E-value=0.036  Score=45.45  Aligned_cols=31  Identities=23%  Similarity=0.390  Sum_probs=28.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +|||+|+ |-+|..++..++..|. +|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            5899987 9999999999999999 89999865

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.026  Score=40.68  Aligned_cols=34  Identities=21%  Similarity=0.137  Sum_probs=30.9

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .++++|+|+|.+|+=+++.++.+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 899998764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.80  E-value=0.2  Score=37.56  Aligned_cols=132  Identities=12%  Similarity=0.062  Sum_probs=76.9

Q ss_pred             EEEEEccCHHHHH-HHHHHHHc-CCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~G~iG~~-a~~la~~~-G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +|.|+|+|.+|.- .+...+.. +. .++++++++++.+.+ +.++...+++..+       +    +....+|+|+-|+
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~----ll~~~iD~V~I~t   70 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTDYR-------D----VLQYGVDAVMIHA   70 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSSTT-------G----GGGGCCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccccHH-------H----hcccccceecccc
Confidence            5889999999854 45555555 55 777777777776655 4577654432211       1    1112689999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-ccccHHHHhh-cCCe-EEeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLH-SGKI-LMGSLFGGLKAKSDIPILLKRYMDKELE  304 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~-~~~~-i~~~~~~~~~~~~~~~~~~~~l~~g~l~  304 (339)
                      +...-.+.+..++..  |.-|++.-+..... -...+..+.. ++.. +.++.  .  ....+.++.+.+..|++-
T Consensus        71 p~~~H~~~~~~al~~--gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~--r--~~~~~~~~~~~~~~G~ig  140 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFN--G--FDAMVQDWLQVAAAGKLP  140 (167)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECG--T--HHHHHHHHHHHHHHTCCC
T ss_pred             ccccccccccccccc--ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeC--c--CCHHHHHHHHHhhcCCCC
Confidence            988778888888887  46677754322111 1122222322 3333 33331  1  123466777888888663

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.70  E-value=0.089  Score=45.53  Aligned_cols=31  Identities=32%  Similarity=0.302  Sum_probs=27.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  184 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~  184 (339)
                      |.+|||.|+ |-+|..+++.+...|+ +|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            578999987 9999999999999999 999986

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.64  E-value=0.17  Score=41.00  Aligned_cols=34  Identities=29%  Similarity=0.220  Sum_probs=29.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      +.||.|+ +++|.+.++.+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            3577787 8999999999999999 99999987554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.60  E-value=0.09  Score=37.55  Aligned_cols=43  Identities=23%  Similarity=0.358  Sum_probs=35.2

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +.+......+++|+|+|+|.+|+-+++.++.+|. +|..+.+.+
T Consensus        21 i~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            3444444567899999999999999999999999 899887654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=93.57  E-value=0.42  Score=36.01  Aligned_cols=95  Identities=20%  Similarity=0.150  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHHhcC
Q 019535          149 NVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       149 ~~~~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      .+..+.+||-.++  |.+|.   . |...|+ +++.++.+++..+.+++    ++. ..+...+.   ..+.. ......
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~-~~~~~~  108 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLP-EAKAQG  108 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHH-HHHHTT
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hcccc-cccccC
Confidence            4577889999965  55544   3 334588 89999999998877753    554 34443332   22211 222233


Q ss_pred             CCccEEE-Ec---CCCHHHHHHHHH--HhhcCCcEEEE
Q 019535          222 GGADYCF-EC---VGLASLVQEAYA--CCRKGWGKTIV  253 (339)
Q Consensus       222 g~~d~v~-d~---~g~~~~~~~~~~--~l~~~~G~~v~  253 (339)
                      ..||+|| |.   .+-...+..++.  .++++ |.++.
T Consensus       109 ~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             CccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            3899998 42   233333444433  46775 66554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.56  E-value=0.1  Score=43.96  Aligned_cols=98  Identities=13%  Similarity=0.121  Sum_probs=62.0

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHHHhc-CC
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIIDMT-DG  222 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~~~~-~g  222 (339)
                      ..++++||-+++|. |..++.+|+  |.++|++++.+++..+.+++    .|.+.  ++.      .+..+.++.+. .+
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~------~d~~~~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE------ANAFDLLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE------SCHHHHHHHHHHTT
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee------ccHHHHhhhhHhhh
Confidence            34689999997643 334455554  33499999999999888864    45432  232      34444444432 23


Q ss_pred             -CccEEE-Ec--CC--C----------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 -GADYCF-EC--VG--L----------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 -~~d~v~-d~--~g--~----------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       .||+|+ |.  .+  .          ......++++|+++ |.++.+...
T Consensus       214 ~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs  263 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS  263 (318)
T ss_dssp             CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             cCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence             899998 42  11  1          12466788899997 998887654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.56  E-value=0.62  Score=33.55  Aligned_cols=74  Identities=15%  Similarity=0.252  Sum_probs=42.2

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|.|.|+ |-+|+..++..... ++ ++++.....+....                          ....++|++||.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~~~~~~--------------------------~~~~~~DvvIDFS~   53 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAGDPLSL--------------------------LTDGNTEVVIDFTH   53 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTTCCTHH--------------------------HHTTTCSEEEECCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCchhh--------------------------hccccCCEEEEccc
Confidence            5889997 99999988876554 66 55544321111111                          11125778888776


Q ss_pred             CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          233 LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       233 ~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      -.. ....++.+... |.=+.+|.+
T Consensus        54 p~~-~~~~~~~~~~~-~~~~ViGTT   76 (135)
T d1yl7a1          54 PDV-VMGNLEFLIDN-GIHAVVGTT   76 (135)
T ss_dssp             TTT-HHHHHHHHHHT-TCEEEECCC
T ss_pred             HHH-HHHHHHHHHhc-CCCEEEecc
Confidence            555 33444444443 555666655

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.089  Score=41.70  Aligned_cols=100  Identities=12%  Similarity=0.002  Sum_probs=64.3

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----CceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VTEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      ....++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.-    ...+ ....   .++.+ + ....+.
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~---~d~~~-~-~~~~~~  127 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVR-NYFC---CGLQD-F-TPEPDS  127 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEE-EEEE---CCGGG-C-CCCSSC
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccc-cccc---ccccc-c-cccccc
Confidence            3456778999999874 7777777766665 8999999999988887632    2111 1111   12111 0 111237


Q ss_pred             ccEEEEc-----CCCH---HHHHHHHHHhhcCCcEEEEecc
Q 019535          224 ADYCFEC-----VGLA---SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       224 ~d~v~d~-----~g~~---~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +|+|+..     .+.+   ..++.+.+.|+++ |.++....
T Consensus       128 fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         128 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            9999862     2322   3588899999997 99888753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.52  E-value=0.052  Score=43.48  Aligned_cols=38  Identities=21%  Similarity=0.215  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      ...+++|+|+|+|+.|+.++..++..|+ +|.+++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3567899999999999999999999999 8999987653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.73  Score=39.07  Aligned_cols=109  Identities=23%  Similarity=0.273  Sum_probs=66.5

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCCCCC---Ccc--------
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKNCG---DKS--------  211 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~~~~---~~~--------  211 (339)
                      +...+++...|+...+|+.|.+++..|+.+|. +.+++..   ++++.+.++.+|++-+.......   ...        
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi-~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGY-RCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccC-CeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            33445566666655679999999999999999 5544433   35778888999987554211100   000        


Q ss_pred             -------------------------HHHHHHHhcCCCccEEEEcCCCHHHHH---HHHHHhhcCCcEEEEecc
Q 019535          212 -------------------------VSQIIIDMTDGGADYCFECVGLASLVQ---EAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       212 -------------------------~~~~l~~~~~g~~d~v~d~~g~~~~~~---~~~~~l~~~~G~~v~~g~  256 (339)
                                               ...++.+..++.+|.++-++|+...+.   ..++...+. -+++.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                                     122333434456899999888654433   344445555 67776654

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=93.48  E-value=0.5  Score=36.76  Aligned_cols=97  Identities=11%  Similarity=0.108  Sum_probs=64.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      +..||-+|+|. |..++.+|+...-..+++++.++.....+    ++.+...+--...    +.......+..+.+|.|+
T Consensus        30 ~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~----Da~~l~~~~~~~~~d~v~  104 (204)
T d2fcaa1          30 NPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI----DADTLTDVFEPGEVKRVY  104 (204)
T ss_dssp             CCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC----CGGGHHHHCCTTSCCEEE
T ss_pred             CceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc----chhhhhcccCchhhhccc
Confidence            34577779874 88999999987544999999998877665    3456544322222    222222223334788887


Q ss_pred             EcCCC--------------HHHHHHHHHHhhcCCcEEEEec
Q 019535          229 ECVGL--------------ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       229 d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      -....              +..++.+.+.|+++ |.+.+..
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            54433              35688999999998 9987763

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.46  E-value=0.035  Score=40.00  Aligned_cols=36  Identities=31%  Similarity=0.449  Sum_probs=31.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +.+++++|+|+|.+|.=+++..+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            346899999999999999999999999 899988754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.45  E-value=0.085  Score=44.44  Aligned_cols=32  Identities=22%  Similarity=0.148  Sum_probs=28.9

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .++||+|+ |-+|..++..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899987 9999999999999999 99999974

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.41  E-value=0.36  Score=36.73  Aligned_cols=81  Identities=15%  Similarity=0.055  Sum_probs=50.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhc------CC---ceEEeCCCCCCccHHHHHHHhcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRF------GV---TEFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~------ga---~~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      +|.|+|+|..|.+.+..+...|. +|..+.+..+  ..+.+.+.      +.   ...+...    .++.+.+     ..
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~----~~~~~~~-----~~   71 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP----EQLEKCL-----EN   71 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG----GGHHHHH-----TT
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhcccccccc----ccHHHHH-----hc
Confidence            58899999999999988888888 8999887433  23333221      10   0111111    2333322     24


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhhc
Q 019535          224 ADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       224 ~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                      .|+|+-+++... ++..++.+.+
T Consensus        72 ad~Ii~avps~~-~~~~~~~l~~   93 (180)
T d1txga2          72 AEVVLLGVSTDG-VLPVMSRILP   93 (180)
T ss_dssp             CSEEEECSCGGG-HHHHHHHHTT
T ss_pred             cchhhcccchhh-hHHHHHhhcc
Confidence            799999999876 5555554443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.41  E-value=0.045  Score=45.77  Aligned_cols=38  Identities=24%  Similarity=0.253  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .....++|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34566799999999999999999999999 999998654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.40  E-value=0.095  Score=40.04  Aligned_cols=48  Identities=25%  Similarity=0.142  Sum_probs=35.5

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      +.+...--.+++|||+|+|+++++++..+..  ..+|+.+.|+.++.+.+
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHH
Confidence            3333333468899999999999987766543  44899999998887665

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.37  E-value=0.11  Score=44.15  Aligned_cols=75  Identities=13%  Similarity=0.191  Sum_probs=49.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHh---c-CCceEE-eCCCCCCccHHHHHHHhcCC-C
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKR---F-GVTEFV-NSKNCGDKSVSQIIIDMTDG-G  223 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~---~-ga~~vi-~~~~~~~~~~~~~l~~~~~g-~  223 (339)
                      ++.+|||+|+ |-+|..+++.+...|. .|+++++++.+... .+.   . +...+. |-.+   .   +.+.+.... .
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d---~---~~l~~~~~~~~   79 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD---Q---NKLLESIREFQ   79 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC---H---HHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccC---h---Hhhhhhhhhch
Confidence            4789999987 9999999999999999 89999987643221 111   1 222221 2222   2   233333334 7


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+|+.+++.
T Consensus        80 ~~~v~~~aa~   89 (356)
T d1rkxa_          80 PEIVFHMAAQ   89 (356)
T ss_dssp             CSEEEECCSC
T ss_pred             hhhhhhhhcc
Confidence            8999998874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.34  E-value=0.27  Score=32.74  Aligned_cols=65  Identities=18%  Similarity=0.330  Sum_probs=45.5

Q ss_pred             EEEEEccCHHHHHH-HHHHHHcCCCEEEEEcCCh-hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGLGSIGLAV-AEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~G~iG~~a-~~la~~~G~~~Vi~~~~~~-~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|-++|-|++|+.+ +++++..|+ .|.+.+..+ +..+.++++|+......+.   +++         .++|+|+-+..
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC---------CCCSEEEECTT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc---------CCCCEEEEecC
Confidence            57778988888755 699999999 999999876 4566788899764333222   222         25788876544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.33  E-value=0.58  Score=35.25  Aligned_cols=97  Identities=24%  Similarity=0.294  Sum_probs=60.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC-h-hHHHHHHhcCCceEEeCCCCCCccHHH----------HHHHhcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-S-EKFEIGKRFGVTEFVNSKNCGDKSVSQ----------IIIDMTDG  222 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~-~-~~~~~~~~~ga~~vi~~~~~~~~~~~~----------~l~~~~~g  222 (339)
                      +|.|.|-|-+|+..++++...+--+++++... + .....+..++.+......+    ....          .+.++. .
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~v~g~~~~~~-~   77 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPE----RVKLFEKAGIEVAGTVDDML-D   77 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGG----GHHHHHHTTCCCCEEHHHHH-H
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccc----cceeecccCcccCCChhHhh-c
Confidence            68899999999999998866652266665432 2 2334444555443332211    1110          001111 1


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++|+|+||+|.-...+.+...+..+ -+.|..+..
T Consensus        78 ~vDvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~  111 (171)
T d1cf2o1          78 EADIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE  111 (171)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             CCCEEEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            5999999999877678888889886 787777653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.22  E-value=0.61  Score=35.37  Aligned_cols=95  Identities=20%  Similarity=0.227  Sum_probs=57.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCC-hh-HHHHHHhcCCceEEeCCC--------CC-CccHHHHHHHhcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVI-SE-KFEIGKRFGVTEFVNSKN--------CG-DKSVSQIIIDMTDG  222 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~-~~-~~~~~~~~ga~~vi~~~~--------~~-~~~~~~~l~~~~~g  222 (339)
                      +|.|.|-|-+|+..++.+.... . +++++... +. ....+...+.......+.        .. ..++....     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            6889999999999999988664 5 77776532 22 233333333222111110        00 01111111     1


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          223 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       223 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      ++|+|+||+|.-...+.+..++..+ -+.+..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            4899999999877677888888775 67777654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.20  E-value=0.044  Score=46.60  Aligned_cols=93  Identities=22%  Similarity=0.289  Sum_probs=53.3

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCC---ceEEeCCCCCCccHHHHHHHhc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGV---TEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga---~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.++++||-+|+|. |.+++.+| ..|+++|++++.++ ..+.+    ++.+.   ..++..+.   .++     .+.
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~~~  102 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----HLP  102 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----CCS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----cCc
Confidence            4456789999999863 55555444 46877999999875 33333    33342   22333222   111     111


Q ss_pred             CCCccEEEE-cCCC--------HHHHHHHHHHhhcCCcEEE
Q 019535          221 DGGADYCFE-CVGL--------ASLVQEAYACCRKGWGKTI  252 (339)
Q Consensus       221 ~g~~d~v~d-~~g~--------~~~~~~~~~~l~~~~G~~v  252 (339)
                      .+.+|+|+. ..+.        ...+....+.|+++ |+++
T Consensus       103 ~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            237999975 2221        23355556789997 8764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.20  E-value=0.076  Score=42.92  Aligned_cols=35  Identities=37%  Similarity=0.444  Sum_probs=31.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      -.+.+|+|+|-|.+|..+++++...|+ +|++++.+
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeecc
Confidence            468999999999999999999999999 88887743

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.12  E-value=0.052  Score=42.05  Aligned_cols=39  Identities=23%  Similarity=0.342  Sum_probs=34.3

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  193 (339)
                      ++|.|+|+|.+|...+.++...|+ +|+..+++++..+.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999999988888999 899999998876654

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.11  E-value=0.15  Score=42.05  Aligned_cols=96  Identities=18%  Similarity=0.273  Sum_probs=65.1

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhc
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      .++.++.+||-+|+|. |..+..+++..  +. +|++++.+++..+.+++    .+.. ..+..+-   .++     . .
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~---~~~-----~-~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGDA---TEI-----E-L   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT---TTC-----C-C
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCC-EEEEEecchhHhhhhhccccccccccccccccc---ccc-----c-c
Confidence            3567888999999874 88888888875  45 89999999988887764    2332 1221111   111     1 1


Q ss_pred             CCCccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEec
Q 019535          221 DGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       221 ~g~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+.+|+|+...     .. ...++.+.+.|+++ |.++.+.
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            23799998532     22 34588999999998 9988764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.98  E-value=0.029  Score=41.85  Aligned_cols=85  Identities=7%  Similarity=-0.148  Sum_probs=51.6

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  235 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~  235 (339)
                      |-++|+|.+|.+.++.++..+. .+.+..|++++.+.+.+.+.....+..+     .        -...|+||-|+....
T Consensus         2 IgfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~-----~--------~~~~DiVil~v~d~~   67 (153)
T d2i76a2           2 LNFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK-----H--------PELNGVVFVIVPDRY   67 (153)
T ss_dssp             CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC-----C--------CC---CEEECSCTTT
T ss_pred             EEEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh-----h--------hccCcEEEEeccchh
Confidence            3467999999998877655433 4457889999888887765433322222     1        014799999998777


Q ss_pred             HHHHHHHHhhcCCcEEEEec
Q 019535          236 LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       236 ~~~~~~~~l~~~~G~~v~~g  255 (339)
                       +......++.....++.++
T Consensus        68 -i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          68 -IKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             -HHHHHTTTCCSSCCEEECC
T ss_pred             -hhHHHhhhcccceeeeecc
Confidence             7777777765413444443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.91  E-value=0.11  Score=43.88  Aligned_cols=72  Identities=19%  Similarity=0.260  Sum_probs=44.4

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC----hhHHHHHHhc---CCceE-EeCCCCCCccHHHHHHHhcCC-Cc
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI----SEKFEIGKRF---GVTEF-VNSKNCGDKSVSQIIIDMTDG-GA  224 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~----~~~~~~~~~~---ga~~v-i~~~~~~~~~~~~~l~~~~~g-~~  224 (339)
                      +|||+|+ |-+|+..+..+...|. +|+++++.    .......+.+   ....+ .|-.+   .   +.+.+.... ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~---~~l~~~~~~~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN---E---ALMTEILHDHAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC---H---HHHHHHHHHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC---H---HHHHHHHhccCC
Confidence            5899987 9999999999999999 89998641    2222322222   23222 22222   2   233333333 79


Q ss_pred             cEEEEcCCC
Q 019535          225 DYCFECVGL  233 (339)
Q Consensus       225 d~v~d~~g~  233 (339)
                      |+||++++.
T Consensus        75 d~ViHlAa~   83 (338)
T d1udca_          75 DTVIHFAGL   83 (338)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCCc
Confidence            999998753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.86  E-value=0.064  Score=41.32  Aligned_cols=83  Identities=22%  Similarity=0.305  Sum_probs=55.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+++|.|+|.|.+|...+++++.+|+ +|++.++++..       +.....       .++.+.+ +    ..|+|+-+.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~-------~~l~ell-~----~sDiv~~~~  100 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT-------NSLEEAL-R----EARAAVCAL  100 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB-------SCSHHHH-T----TCSEEEECC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee-------echhhhh-h----ccchhhccc
Confidence            47899999999999999999999999 99999876532       111111       1222222 2    368888766


Q ss_pred             CCH-HH----HHHHHHHhhcCCcEEEEec
Q 019535          232 GLA-SL----VQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       232 g~~-~~----~~~~~~~l~~~~G~~v~~g  255 (339)
                      +-. .+    -...++.|+++ ..+|.++
T Consensus       101 pl~~~t~~li~~~~l~~mk~~-ailIN~~  128 (181)
T d1qp8a1         101 PLNKHTRGLVKYQHLALMAED-AVFVNVG  128 (181)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             ccccccccccccceeeecccc-ceEEecc
Confidence            432 11    24666777776 7777765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.86  E-value=0.22  Score=37.76  Aligned_cols=42  Identities=21%  Similarity=0.172  Sum_probs=36.7

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  197 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g  197 (339)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC
Confidence            37889999999999988888999 8999999999988876544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.80  E-value=0.22  Score=38.69  Aligned_cols=73  Identities=23%  Similarity=0.351  Sum_probs=46.9

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +....++ .|++||-+|+|. |.+++. +...|+++|++++.+++..+.+++.-. ..++..      ++    .+ ..+
T Consensus        41 ~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~------D~----~~-l~~  106 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA------DV----SE-ISG  106 (197)
T ss_dssp             HHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC------CG----GG-CCC
T ss_pred             HHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE------eh----hh-cCC
Confidence            3344444 689999998763 544443 445677689999999999888877432 234332      22    11 234


Q ss_pred             CccEEEEc
Q 019535          223 GADYCFEC  230 (339)
Q Consensus       223 ~~d~v~d~  230 (339)
                      .||+||-.
T Consensus       107 ~fD~Vi~N  114 (197)
T d1ne2a_         107 KYDTWIMN  114 (197)
T ss_dssp             CEEEEEEC
T ss_pred             cceEEEeC
Confidence            89999854

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.15  Score=43.42  Aligned_cols=76  Identities=14%  Similarity=0.124  Sum_probs=43.0

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-----HHHHHHhc---CCceE-EeCCCCCCccHHHHHHHhcCC-
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRF---GVTEF-VNSKNCGDKSVSQIIIDMTDG-  222 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-----~~~~~~~~---ga~~v-i~~~~~~~~~~~~~l~~~~~g-  222 (339)
                      +.|||+|+ |-+|..++..+...|. +|+++++...     +.+.+...   ....+ +-.-+   -.-.+.+.+...+ 
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---l~d~~~~~~~~~~~   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD---LSDTSNLTRILREV   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCC---SSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEee---cCCHHHHHHHHhcc
Confidence            56889986 9999999999999999 9999997432     22222111   01111 11111   1113344444445 


Q ss_pred             CccEEEEcCCC
Q 019535          223 GADYCFECVGL  233 (339)
Q Consensus       223 ~~d~v~d~~g~  233 (339)
                      .+|+||++++.
T Consensus        78 ~~d~v~h~aa~   88 (357)
T d1db3a_          78 QPDEVYNLGAM   88 (357)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEEeecc
Confidence            78999998754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.73  E-value=0.06  Score=42.17  Aligned_cols=86  Identities=20%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|+..+++++.+|+ +|++.++.+.+..   ...    +..     .++.+.+.+     .|++.-+.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~----~~~-----~~l~~l~~~-----~D~v~~~~  105 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPD----FDY-----VSLEDLFKQ-----SDVIDLHV  105 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTT----CEE-----CCHHHHHHH-----CSEEEECC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcc----hhH-----HHHHHHHHh-----cccceeee
Confidence            46899999999999999999999999 9999987543210   000    111     233333333     57877655


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +. +.    .-...++.|+++ ..+|.++.
T Consensus       106 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         106 PGIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             cccccccccccHHHhhccCCc-eEEEeccc
Confidence            43 22    134566777775 66666653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.69  E-value=0.81  Score=33.42  Aligned_cols=77  Identities=5%  Similarity=-0.002  Sum_probs=52.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH-HHH---HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-EIG---KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~---~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      ...++|.|.|.+|..+++.+...|. .+++++.++++. +.+   ...|.. ++.-+.    .-.+.+++..-..+|.++
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~----~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS----NDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT----TSHHHHHHHTTTTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcE-EEEccC----cchHHHHHhccccCCEEE
Confidence            4579999999999999999999999 888888777542 222   223443 443332    223344444334789999


Q ss_pred             EcCCCHH
Q 019535          229 ECVGLAS  235 (339)
Q Consensus       229 d~~g~~~  235 (339)
                      -+++...
T Consensus        77 ~~~~~d~   83 (153)
T d1id1a_          77 ALSDNDA   83 (153)
T ss_dssp             ECSSCHH
T ss_pred             EccccHH
Confidence            8888754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.68  E-value=0.11  Score=37.03  Aligned_cols=38  Identities=32%  Similarity=0.441  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      ++++++++|+|+|.+|.=++..++..|. +|..+.+++.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4567899999999999999999999999 8999987653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.66  E-value=0.081  Score=42.41  Aligned_cols=35  Identities=26%  Similarity=0.189  Sum_probs=30.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +..++|+|+|+|..|++++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 89999864

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.51  E-value=0.1  Score=36.74  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++++|+|+|.+|.=+++.++.+|. +|..+.+.+
T Consensus        20 ~p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            35789999999999999999999999 898888754

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=92.49  E-value=0.1  Score=42.21  Aligned_cols=94  Identities=17%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHh-cC
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDM-TD  221 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~-~~  221 (339)
                      ++++.+||-+|+|. |..+..+++. |.++|++++.+++.++.+++    .+.. .+  +..+.      ..  ... ..
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~------~~--~~~~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS------YG--RHMDLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT------TT--SCCCCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch------hh--hccccc
Confidence            57889999999874 6667777765 44489999999998888864    2321 22  11111      00  011 12


Q ss_pred             CCccEEEEcCCC----------HHHHHHHHHHhhcCCcEEEEe
Q 019535          222 GGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       222 g~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      +.||+|+....-          ...++.+.+.|+++ |.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            379999753321          13467788899997 988764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.44  E-value=0.47  Score=33.89  Aligned_cols=70  Identities=19%  Similarity=0.272  Sum_probs=45.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g  232 (339)
                      +|.|+|+ |-+|++..+++...+. .++.. +.+.             .        +.+         ..+|+++|.+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~~-------------~--------~~~---------~~~DVvIDFS~   50 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVNG-------------V--------EEL---------DSPDVVIDFSS   50 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETTE-------------E--------EEC---------SCCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCCc-------------H--------HHh---------ccCCEEEEecC
Confidence            5889997 9999999999999998 55543 2110             0        000         14788888887


Q ss_pred             CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          233 LASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       233 ~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .....+.+-.++..  +.=+.+|.+
T Consensus        51 p~~~~~~l~~~~~~--~~p~ViGTT   73 (128)
T d1vm6a3          51 PEALPKTVDLCKKY--RAGLVLGTT   73 (128)
T ss_dssp             GGGHHHHHHHHHHH--TCEEEECCC
T ss_pred             HHHHHHHHHHHHhc--CCCEEEEcC
Confidence            76634444444444  566677665

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=92.40  E-value=0.077  Score=42.19  Aligned_cols=94  Identities=12%  Similarity=0.056  Sum_probs=59.0

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhc-CCC
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMT-DGG  223 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~-~g~  223 (339)
                      ..+...+.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++....  .++..+-   +       ... .+.
T Consensus        15 ~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~-------~~~~~~~   81 (225)
T d2p7ia1          15 FTPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF---E-------DAQLPRR   81 (225)
T ss_dssp             HGGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG---G-------GCCCSSC
T ss_pred             hhhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc---c-------ccccccc
Confidence            33445677899999874 777666654 577 899999999999998764322  2332221   1       112 237


Q ss_pred             ccEEEEc-----CCCHH-HHHHHH-HHhhcCCcEEEEe
Q 019535          224 ADYCFEC-----VGLAS-LVQEAY-ACCRKGWGKTIVL  254 (339)
Q Consensus       224 ~d~v~d~-----~g~~~-~~~~~~-~~l~~~~G~~v~~  254 (339)
                      ||+|+-.     +..+. .+..+. ++|+++ |.++..
T Consensus        82 fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          82 YDNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            9999742     22332 245555 578897 877764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.27  E-value=0.28  Score=41.16  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=45.4

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|||+|+ |-+|...++.+...|..+|++++....+...+....--..+..+-....++.+....    ++|+||.+++.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCcccccccc
Confidence            5899987 999999998887888438999987655444333221112222211001233333322    58999998874

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.22  E-value=0.39  Score=35.34  Aligned_cols=68  Identities=15%  Similarity=0.093  Sum_probs=44.4

Q ss_pred             CCCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhcC
Q 019535          151 EVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTD  221 (339)
Q Consensus       151 ~~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~~  221 (339)
                      -.|.+||-+++  |.+|..+    .+.|+++|+.++.+++..+.+++    ++..   .++.      .+..+.+.. ..
T Consensus        13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~------~D~~~~l~~-~~   81 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK------MEAERAIDC-LT   81 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC------SCHHHHHHH-BC
T ss_pred             CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc------ccccccccc-cc
Confidence            36889999965  5555533    34688899999999888776654    4543   2332      345554433 34


Q ss_pred             CCccEEEE
Q 019535          222 GGADYCFE  229 (339)
Q Consensus       222 g~~d~v~d  229 (339)
                      +.+|+||-
T Consensus        82 ~~fDiIf~   89 (152)
T d2esra1          82 GRFDLVFL   89 (152)
T ss_dssp             SCEEEEEE
T ss_pred             cccceeEe
Confidence            48999983

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.15  Score=41.86  Aligned_cols=101  Identities=11%  Similarity=0.022  Sum_probs=59.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHc-------CCCEEEEEcCChhHHHHHHhc-C-----CceEEeCCCCCCccHHH--
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLC-------GATRIIGVDVISEKFEIGKRF-G-----VTEFVNSKNCGDKSVSQ--  214 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~-------G~~~Vi~~~~~~~~~~~~~~~-g-----a~~vi~~~~~~~~~~~~--  214 (339)
                      .++.-+||-+|+|. |..+..+++.+       +. .+++++.+++..+.+++. .     ....++...   .+..+  
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~-~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~  112 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK---ETSSEYQ  112 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEE-EEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC---SCHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCce-EEEEEeCcHHHHHHHHHHHhhccccccccccchh---hhhhhhc
Confidence            44555799998863 55555554432       23 678999998888877652 1     111233333   22222  


Q ss_pred             -HHHHhcCC-CccEEEEc-----CCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          215 -IIIDMTDG-GADYCFEC-----VGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       215 -~l~~~~~g-~~d~v~d~-----~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       ........ .||+|+-.     ... ...++.+.++|+++ |.++....
T Consensus       113 ~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         113 SRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             chhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence             22222233 89999852     222 35689999999997 98877654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.15  E-value=0.059  Score=44.45  Aligned_cols=33  Identities=21%  Similarity=0.292  Sum_probs=30.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .|+|+|+|+.|++++..++..|. +|.++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            59999999999999999999999 8999987653

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.11  E-value=0.039  Score=43.88  Aligned_cols=99  Identities=23%  Similarity=0.218  Sum_probs=59.1

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHH---
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID---  218 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~---  218 (339)
                      .+.....+||-+|++ .|..++.+|+++  +. +|++++.+++..+.++    ..|...-+....   .+..+.+.+   
T Consensus        52 v~~~kpk~ILEiGt~-~G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~---Gd~~e~l~~l~~  126 (214)
T d2cl5a1          52 IREYSPSLVLELGAY-CGYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKK  126 (214)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGHHH
T ss_pred             HHhhCCCEEEEEccC-chhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceeee---ccccccccchhh
Confidence            334456799999975 377788888876  44 9999999988777664    346422122222   344443333   


Q ss_pred             hcCC-CccEEE-EcCCCHH----HHHHHHHHhhcCCcEEE
Q 019535          219 MTDG-GADYCF-ECVGLAS----LVQEAYACCRKGWGKTI  252 (339)
Q Consensus       219 ~~~g-~~d~v~-d~~g~~~----~~~~~~~~l~~~~G~~v  252 (339)
                      .... .+|++| |+.-...    .+...++.|+++ |.++
T Consensus       127 ~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv  165 (214)
T d2cl5a1         127 KYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLL  165 (214)
T ss_dssp             HSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             cccccccceeeecccccccccHHHHHHHhCccCCC-cEEE
Confidence            2233 799887 5433321    134455668886 6544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.02  E-value=0.24  Score=39.64  Aligned_cols=34  Identities=24%  Similarity=0.354  Sum_probs=28.7

Q ss_pred             CCCCEEEEEccCHHHHHHHHHH-HHcCCCEEEEEcC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDV  185 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la-~~~G~~~Vi~~~~  185 (339)
                      -.+.+|+|+|.|.+|..+++++ +..|+ +|++++.
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVSD   63 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEeec
Confidence            3688999999999999999887 56799 8888763

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.02  E-value=0.089  Score=42.72  Aligned_cols=33  Identities=24%  Similarity=0.323  Sum_probs=28.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .|+|+|+|+.|++++.+++..|..+|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            699999999999999999999965788887754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.93  E-value=0.33  Score=39.25  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=30.7

Q ss_pred             CCEEEEEcc-CHHHHHHHH-HHHH--cCCCEEEEEcCChhHHHHH
Q 019535          153 GSTVVIFGL-GSIGLAVAE-GARL--CGATRIIGVDVISEKFEIG  193 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~-la~~--~G~~~Vi~~~~~~~~~~~~  193 (339)
                      ++.++|.|+ +++|.+.++ +|+.  .|+ +|+.+++++++.+.+
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            555667787 799998875 4553  688 999999998887665

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.89  E-value=0.7  Score=35.50  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=67.0

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~  217 (339)
                      +.+...+++++.++-.++|. |-.+..+++.. +. +|++++++++..+.+++    ++.. .++..+-   .++...+.
T Consensus        15 vi~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~   89 (192)
T d1m6ya2          15 VIEFLKPEDEKIILDCTVGE-GGHSRAILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLK   89 (192)
T ss_dssp             HHHHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHH
T ss_pred             HHHhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHH
Confidence            34556678888776554443 33344455554 45 99999999999888865    3322 3344333   45555555


Q ss_pred             HhcCCCccEEE-EcCCCH--------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535          218 DMTDGGADYCF-ECVGLA--------------SLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       218 ~~~~g~~d~v~-d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ....+.+|.|+ |..-++              ..+..+.+.+.++ |+++.+...
T Consensus        90 ~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~  143 (192)
T d1m6ya2          90 TLGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFH  143 (192)
T ss_dssp             HTTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESS
T ss_pred             HcCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeeccc
Confidence            55445888885 643221              3366777788887 888877654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.85  E-value=0.086  Score=42.08  Aligned_cols=74  Identities=19%  Similarity=0.236  Sum_probs=45.6

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.+|||.|+ |-+|...++.+...|. .+|+++++++.+...-..-..... .|..+      .+.+.+.. .++|++|.
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAF-QGHDVGFC   86 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGG-SSCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc------cccccccc-cccccccc
Confidence            468999987 9999999988877774 489999987644322111112222 22222      11222222 26899999


Q ss_pred             cCCC
Q 019535          230 CVGL  233 (339)
Q Consensus       230 ~~g~  233 (339)
                      |++.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9875

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.80  E-value=0.4  Score=39.17  Aligned_cols=35  Identities=23%  Similarity=0.156  Sum_probs=29.9

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +..+|||.|+ |-+|...+..+...|. +|+++++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            3567999987 9999999998888998 899988764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.77  E-value=0.17  Score=36.63  Aligned_cols=37  Identities=27%  Similarity=0.354  Sum_probs=32.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +..+++|+|+|+|.+|.=++..++..|. +|..+.+.+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            4567899999999999999999999999 899998764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.68  E-value=0.071  Score=42.66  Aligned_cols=33  Identities=21%  Similarity=0.419  Sum_probs=28.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +|+|+|+|+.|+.++..++..|.++|++++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999974698988754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.61  E-value=0.16  Score=37.82  Aligned_cols=36  Identities=28%  Similarity=0.458  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .+++|+|+|+|.+|.-++..+...|++.|+++.+.+
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            467899999999999999999999997888887643

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.58  E-value=0.91  Score=35.57  Aligned_cols=92  Identities=21%  Similarity=0.268  Sum_probs=59.1

Q ss_pred             CEEEEEccCHHHH-HHHHHHHHc-CCCEEEEE-cCChhHHHH-HHhcCCc--eEEeCCCCCCccHHHHHHHhcCC-CccE
Q 019535          154 STVVIFGLGSIGL-AVAEGARLC-GATRIIGV-DVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMTDG-GADY  226 (339)
Q Consensus       154 ~~VLI~G~G~iG~-~a~~la~~~-G~~~Vi~~-~~~~~~~~~-~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g-~~d~  226 (339)
                      -+|.|+|+|.+|. ..+...+.. +. +++++ ++++++.+. .+++|..  .+..+++     +    .++... .+|+
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-----~----~ell~~~~iD~  103 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-----F----DKIAKDPKIDA  103 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-----G----GGGGGCTTCCE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc-----h----hhhccccccee
Confidence            4789999998886 344444443 66 66655 556666544 4556642  3333333     2    233334 7999


Q ss_pred             EEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          227 CFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       227 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      |+-++....-.+.+.+++..  |.-+++.-+
T Consensus       104 V~I~tp~~~H~~~~~~al~~--gk~v~~EKP  132 (221)
T d1h6da1         104 VYIILPNSLHAEFAIRAFKA--GKHVMCEKP  132 (221)
T ss_dssp             EEECSCGGGHHHHHHHHHHT--TCEEEECSS
T ss_pred             eeeccchhhhhhHHHHhhhc--chhhhcCCC
Confidence            99999887778888888887  577777543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.40  E-value=0.41  Score=34.10  Aligned_cols=88  Identities=16%  Similarity=0.200  Sum_probs=55.3

Q ss_pred             CCCEEEEEccCH--HH---------HHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGLGS--IG---------LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~G~--iG---------~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..++|||+|+|+  +|         .-++.-+|..|+ +++.+..+++....-... +++++- ..   - ..+.+.+..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-eP---l-t~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-EP---I-HWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-SC---C-CHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-ec---C-CHHHHHHHH
Confidence            457899999864  33         344555567799 899999888765332222 344432 11   1 223333333


Q ss_pred             CC-CccEEEEcCCCHHHHHHHHHHhhc
Q 019535          221 DG-GADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       221 ~g-~~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                      .. .+|.|+-..|+...++.+.++...
T Consensus        79 ~~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          79 EKERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HHHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             HHhCcCCeEEEeeeehHhHHHHHHHHc
Confidence            33 789999999988878777777654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.13  Score=42.85  Aligned_cols=36  Identities=25%  Similarity=0.348  Sum_probs=31.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ++..+|+|+|+|..|+.|+..+...|. +|.++..++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 899987653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.21  E-value=0.38  Score=40.51  Aligned_cols=73  Identities=16%  Similarity=0.154  Sum_probs=44.1

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh----hHHHHH---HhcCCceE-EeCCCCCCccHHHHHHHhcCC-C
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG---KRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-G  223 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~----~~~~~~---~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g-~  223 (339)
                      +.|||+|+ |-+|...+..+...|. +|+++++..    +.....   ..-+...+ .|-.+      .+.+.+.... +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d------~~~l~~~~~~~~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD------RKGLEKVFKEYK   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC------HHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC------HHHHHHHHhccC
Confidence            46899987 9999999988888999 898886421    111212   22233322 22222      2233333333 7


Q ss_pred             ccEEEEcCCC
Q 019535          224 ADYCFECVGL  233 (339)
Q Consensus       224 ~d~v~d~~g~  233 (339)
                      +|+||++++.
T Consensus        75 ~d~VihlAa~   84 (347)
T d1z45a2          75 IDSVIHFAGL   84 (347)
T ss_dssp             CCEEEECCSC
T ss_pred             CCEEEEcccc
Confidence            9999998764

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.54  Score=38.60  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             HhcCCCCCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEE-eCCCCCCccHHHHHHH
Q 019535          146 RTANVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFV-NSKNCGDKSVSQIIID  218 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi-~~~~~~~~~~~~~l~~  218 (339)
                      ..+..+++++||-..+  |+-..   +++....-.+|++.+.++.+...+    +.+|...+. ...+   .....   .
T Consensus        96 ~~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~~---~  166 (284)
T d1sqga2          96 TWLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQ---W  166 (284)
T ss_dssp             HHHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHH---H
T ss_pred             cccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccch---h
Confidence            3457889999999944  53333   333333323899999999987666    457865333 2222   12111   1


Q ss_pred             hcCCCccEEE-E--cCCC
Q 019535          219 MTDGGADYCF-E--CVGL  233 (339)
Q Consensus       219 ~~~g~~d~v~-d--~~g~  233 (339)
                      ...+.||.|+ |  |+|.
T Consensus       167 ~~~~~fd~IL~DaPCSg~  184 (284)
T d1sqga2         167 CGEQQFDRILLDAPCSAT  184 (284)
T ss_dssp             HTTCCEEEEEEECCCCCG
T ss_pred             cccccccEEEEecccccc
Confidence            2223799997 5  7765

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=91.16  E-value=1.6  Score=32.05  Aligned_cols=87  Identities=15%  Similarity=0.121  Sum_probs=55.6

Q ss_pred             EEEEEccCHHHHH-HHHHHHHc-CCCEEEEEc-CChhHH-HHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          155 TVVIFGLGSIGLA-VAEGARLC-GATRIIGVD-VISEKF-EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       155 ~VLI~G~G~iG~~-a~~la~~~-G~~~Vi~~~-~~~~~~-~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      +|.|+|+|.+|.- .+...+.. ++ +++++. +++++. ++.++++... .       .++ +.+.    ..+|+|+-|
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~-------~~~-~~l~----~~~D~V~I~   68 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-A-------DSL-SSLA----ASCDAVFVH   68 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-C-------SSH-HHHH----TTCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-c-------ccc-hhhh----hhccccccc
Confidence            5889999988863 55655554 66 666554 555554 3445676542 1       122 2222    248999999


Q ss_pred             CCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          231 VGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ++...-.+.+..++..  |.-|++.-+
T Consensus        69 tp~~~h~~~~~~al~~--gk~V~~EKP   93 (164)
T d1tlta1          69 SSTASHFDVVSTLLNA--GVHVCVDKP   93 (164)
T ss_dssp             SCTTHHHHHHHHHHHT--TCEEEEESS
T ss_pred             ccchhccccccccccc--cceeecccc
Confidence            9887768888888877  566777543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.96  E-value=0.13  Score=43.23  Aligned_cols=34  Identities=18%  Similarity=0.259  Sum_probs=30.3

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ..+|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            4689999999999999999988898 999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.94  E-value=0.15  Score=41.33  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=30.5

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      -.+.+|+|+|-|.+|..+++++...|+ +|++++.
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLSG   67 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEec
Confidence            367899999999999999999999999 8888753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.83  E-value=0.77  Score=38.30  Aligned_cols=99  Identities=15%  Similarity=0.117  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC--c--eEEeCCCCCCccHHHHHH
Q 019535          148 ANVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T--EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       148 ~~~~~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga--~--~vi~~~~~~~~~~~~~l~  217 (339)
                      ..+.+|++||-..+  |+.++.    |...|++.|+.++.++...+.+++    .|.  .  .++.      .+..+.++
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~------~d~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV------MDVFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE------SCHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE------ccHHHHHH
Confidence            45678999999954  555443    234688789999999988888754    232  2  2333      34445554


Q ss_pred             Hhc-CC-CccEEE-EcC--CC------------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535          218 DMT-DG-GADYCF-ECV--GL------------ASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       218 ~~~-~g-~~d~v~-d~~--g~------------~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ... .+ .||+|| |.-  +.            ......++++++++ |.++.+..+
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs  265 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA  265 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            432 34 899998 421  11            23467788999997 988887643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.80  E-value=0.13  Score=40.93  Aligned_cols=36  Identities=22%  Similarity=0.320  Sum_probs=31.1

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      ++++||.|+ +++|.+.++.+...|+ +|+.++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            357888987 8999999999999999 99999987654

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=90.78  E-value=1.3  Score=36.53  Aligned_cols=99  Identities=18%  Similarity=0.166  Sum_probs=61.1

Q ss_pred             hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC--ChhHHHHHHhcCCceEEeCCC------------------
Q 019535          147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSKN------------------  206 (339)
Q Consensus       147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~~ga~~vi~~~~------------------  206 (339)
                      ...+.++.+|+...+|+-|.+++..++.+|.+-++.+..  ++.+.+.++.+|+..+.....                  
T Consensus        55 ~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~  134 (310)
T d1y7la1          55 DGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDP  134 (310)
T ss_dssp             TTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCT
T ss_pred             cCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhc
Confidence            334566766666577999999999999999954444433  345677778888865543211                  


Q ss_pred             --------CCCcc--------HHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhh
Q 019535          207 --------CGDKS--------VSQIIIDMTDGGADYCFECVGLASLVQEAYACCR  245 (339)
Q Consensus       207 --------~~~~~--------~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~  245 (339)
                              .....        ...++.+..++.+|.++-++|+...+.-....+.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         135 SRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             CccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                    00000        1223444444478999988887665665555554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.60  E-value=0.2  Score=41.03  Aligned_cols=36  Identities=17%  Similarity=0.172  Sum_probs=26.9

Q ss_pred             EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHH
Q 019535          156 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEI  192 (339)
Q Consensus       156 VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~  192 (339)
                      +||.|+ +++|.+.++.+...|+ +|+.+.++ +++.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            456687 8999999999999999 88776654 444433

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.52  E-value=0.12  Score=41.69  Aligned_cols=33  Identities=24%  Similarity=0.274  Sum_probs=29.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      -|+|+|+|+.|++++..+...|. +|.+++.++.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            38999999999999999999999 8999998764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.52  E-value=0.12  Score=39.15  Aligned_cols=30  Identities=30%  Similarity=0.196  Sum_probs=27.0

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|+.|+.++..+...|. +|..+++.
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~-~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGI-RTGLMGER   33 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHcCC-eEEEEEEe
Confidence            7899999999999999999999 78888753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.51  E-value=0.47  Score=39.82  Aligned_cols=37  Identities=16%  Similarity=0.039  Sum_probs=29.0

Q ss_pred             CCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 019535          153 GSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKF  190 (339)
Q Consensus       153 ~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~~~  190 (339)
                      ++..||.|+   .++|++.++.+...|+ +|+.+.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence            456688884   3899999999999999 888887665543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.49  E-value=0.31  Score=40.46  Aligned_cols=31  Identities=23%  Similarity=0.339  Sum_probs=27.5

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      ++|||.|+ |-+|...+..+...|. +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            58999987 9999999988888999 8999874

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.47  E-value=0.12  Score=41.30  Aligned_cols=32  Identities=34%  Similarity=0.454  Sum_probs=28.3

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      |+|+|+|+.|++++..+...|. +|++++..+.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            8899999999999988888999 8999987653

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.47  E-value=0.7  Score=34.66  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=57.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHHHHhc----CC----------------c--eEEeCCCCCCc
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRF----GV----------------T--EFVNSKNCGDK  210 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~~----ga----------------~--~vi~~~~~~~~  210 (339)
                      +|.|.|-|-+|+++.+++...+. +|+++....  +...++-++    |.                .  .+...++    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            57899999999999998888888 777775432  233333222    20                0  1111111    


Q ss_pred             cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          211 SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       211 ~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                       . +.+ .|..-++|+|+||+|.-...+.+...+..+ -+=|+++.+
T Consensus        77 -p-~~i-~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP  119 (168)
T d2g82a1          77 -P-KEI-PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAP  119 (168)
T ss_dssp             -G-GGC-CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             -h-HHC-cccccCCceeEeccccccchHHhhhhhccc-cceeeeccc
Confidence             1 111 122227999999999866577788888875 555555543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.40  E-value=0.067  Score=41.21  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=29.9

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      ++..|+|+|+|+.|+.++..+...|. +|+.+.+.+
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            34679999999999999999999999 888887543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.36  E-value=0.14  Score=37.81  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=29.6

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      .+.+|||+|+|.+|.--+..+...|+ +|++++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            57899999999999999999999999 8888854

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.28  E-value=0.14  Score=35.94  Aligned_cols=35  Identities=14%  Similarity=0.019  Sum_probs=27.4

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHc---CCCEEEEEcCCh
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLC---GATRIIGVDVIS  187 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~---G~~~Vi~~~~~~  187 (339)
                      .+++++|+|+|.+|.=+++++..+   |. +|..+.+++
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            457999999999999888776554   77 888887653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.27  E-value=0.45  Score=40.20  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=45.8

Q ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      .++-+|||+|+ |-+|..++..+...|. +|+++++.+.... ............+-   .+... +.+.. .++|.|+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D~---~~~~~-~~~~~-~~~d~Vih   85 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVDL---RVMEN-CLKVT-EGVDHVFN   85 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECCT---TSHHH-HHHHH-TTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEeec---hhHHH-HHHHh-hcCCeEee
Confidence            35678999987 9999999999999999 8999876433211 11122222222221   22322 33322 26899998


Q ss_pred             cCC
Q 019535          230 CVG  232 (339)
Q Consensus       230 ~~g  232 (339)
                      +++
T Consensus        86 ~a~   88 (363)
T d2c5aa1          86 LAA   88 (363)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            774

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.27  E-value=0.64  Score=38.99  Aligned_cols=37  Identities=16%  Similarity=0.172  Sum_probs=32.0

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      +.++|||+|+ |.+|...+..+...|. +|+++.|++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            4678999987 9999999999999999 89999887654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.91  E-value=0.13  Score=40.21  Aligned_cols=30  Identities=30%  Similarity=0.292  Sum_probs=27.2

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|+.|+.++..+..+|. +|++++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            7889999999999999999999 88888754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=89.86  E-value=0.33  Score=35.99  Aligned_cols=40  Identities=20%  Similarity=0.197  Sum_probs=32.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  190 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~  190 (339)
                      ++..+|.|+|+|.+|..++.++...+..+++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            4567899999999999888888888876899998776543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.83  E-value=0.22  Score=35.02  Aligned_cols=35  Identities=14%  Similarity=-0.034  Sum_probs=27.7

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCC--EEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~--~Vi~~~~~  186 (339)
                      .+++++|+|+|.+|.=++..++.+|.+  +|..+.+.
T Consensus        19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            467999999999999888877777642  68887764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.82  E-value=0.25  Score=34.99  Aligned_cols=36  Identities=25%  Similarity=0.282  Sum_probs=31.3

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +.+.+++|+|+|.+|.=+++.+...|. +|..+.+++
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345789999999999999999999999 899888754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.66  E-value=0.23  Score=37.14  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=29.1

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCCh
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVIS  187 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~  187 (339)
                      |++|+|+|+|.+|+.+++.++..+.+ +|+.+++.+
T Consensus         2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68999999999999999888888743 788887654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.62  E-value=0.16  Score=39.96  Aligned_cols=31  Identities=16%  Similarity=0.335  Sum_probs=28.0

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7899999999999999989999 899998864

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.54  E-value=0.087  Score=42.78  Aligned_cols=100  Identities=13%  Similarity=0.082  Sum_probs=62.7

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-c--eEEeCCCCCCccHHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T--EFVNSKNCGDKSVSQII  216 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga-~--~vi~~~~~~~~~~~~~l  216 (339)
                      +.....+....+||-+|+| .|..++.+++...-.++++++. ++..+.++    +.|. .  ..+..      ++.   
T Consensus        72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~------D~~---  140 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG------DFF---  140 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC------CTT---
T ss_pred             HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc------cch---
Confidence            4455667778899999987 4888889998884338888886 44444443    2332 1  12211      110   


Q ss_pred             HHhcCCCccEEEEcC-----CCH---HHHHHHHHHhhcCCcEEEEecc
Q 019535          217 IDMTDGGADYCFECV-----GLA---SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       217 ~~~~~g~~d~v~d~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                       +...+++|+|+-..     +.+   ..++.+.+.|+++ |++++...
T Consensus       141 -~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         141 -EPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             -SCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             -hhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence             11123689987422     222   3478889999998 99988754

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.51  E-value=0.91  Score=33.01  Aligned_cols=71  Identities=14%  Similarity=0.147  Sum_probs=44.9

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCC---c--eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGV---T--EFVNSKNCGDKSVSQIIIDMTDGGADY  226 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~ga---~--~vi~~~~~~~~~~~~~l~~~~~g~~d~  226 (339)
                      .+|.|+|+ |.+|..++.++...+. .+++.++.++.+.+.+.-.-+   .  .... ..   .+..+.+     .+.|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~---~~~~~~~-----~~aDi   71 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GP---EQLPDCL-----KGCDV   71 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SG---GGHHHHH-----TTCSE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cC---CChHHHh-----CCCCE
Confidence            37899996 9999999999888875 578888887655443321111   1  1111 11   2333333     25899


Q ss_pred             EEEcCCC
Q 019535          227 CFECVGL  233 (339)
Q Consensus       227 v~d~~g~  233 (339)
                      |+-+.|.
T Consensus        72 vVitag~   78 (144)
T d1mlda1          72 VVIPAGV   78 (144)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9988874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.46  E-value=0.58  Score=38.64  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=33.0

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFG  197 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~g  197 (339)
                      ++|||.|+ |-+|..++..+...|+ +|+++++...  ..+.++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            47999987 9999999998888899 9999987542  234444444

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.45  E-value=0.12  Score=42.06  Aligned_cols=32  Identities=31%  Similarity=0.387  Sum_probs=28.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            48999999999999999999999 899998653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.27  E-value=2.2  Score=35.35  Aligned_cols=56  Identities=25%  Similarity=0.261  Sum_probs=38.2

Q ss_pred             HhcCCCCCCEEEEE-ccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEE
Q 019535          146 RTANVEVGSTVVIF-GLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFV  202 (339)
Q Consensus       146 ~~~~~~~~~~VLI~-G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi  202 (339)
                      +...++.+...+|. .+|+.|.+.+..++.+|. +.+++..   ++.+.+.++.+|+..++
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~-~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGY-KLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhcc-ceEEeehhhhhhhhhhhhhccCcceEE
Confidence            33445555455555 569999999999999999 4444432   35677888888886543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.06  E-value=0.32  Score=37.76  Aligned_cols=40  Identities=38%  Similarity=0.591  Sum_probs=35.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      +|.|+|.|-+|+.++..+...|. +|++++.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47899999999998888888999 99999999988887764

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=88.91  E-value=0.33  Score=37.55  Aligned_cols=90  Identities=26%  Similarity=0.302  Sum_probs=59.2

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +.++.+||-+|+|. |..+..+     . ++++++.+++..+.+++.+...+ ..+.   .++     ...++.||+|+.
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~-~~d~---~~l-----~~~~~~fD~I~~   97 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVL-KGTA---ENL-----PLKDESFDFALM   97 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEE-ECBT---TBC-----CSCTTCEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhcccccccccccc-cccc---ccc-----cccccccccccc
Confidence            34567899999863 5554444     2 57899999999999988765433 2222   111     111237999985


Q ss_pred             c-----CCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535          230 C-----VGL-ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       230 ~-----~g~-~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .     +.. ...++++.+.|+++ |.++....
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            3     232 33478999999997 98887754

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=88.86  E-value=1.5  Score=37.55  Aligned_cols=56  Identities=25%  Similarity=0.177  Sum_probs=40.4

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~  205 (339)
                      +++++.+|+-..+|+.|++++..++.+|. +++++..   ++.+.+.++.+|++-+....
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGi-k~~Iv~P~~~~~~K~~~ira~GAeVi~~~~  198 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGY-RARVYLPGAAEEFGKLLPRLLGAQVIVDPE  198 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTC-EEEEEEETTSCHHHHHHHHHTTCEEEEETT
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCC-CEEEEeeccccccccccccccCcceeecCc
Confidence            35666654444569999999999999999 5555543   35677888999987665543

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=0.18  Score=39.38  Aligned_cols=30  Identities=23%  Similarity=0.327  Sum_probs=27.1

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|+.|+.++..|..+|. +|.++...
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7889999999999999999999 88888764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.63  E-value=0.25  Score=39.74  Aligned_cols=33  Identities=30%  Similarity=0.497  Sum_probs=28.3

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .|||.|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            5788887 8999999999999999 8999987643

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.60  E-value=0.19  Score=39.37  Aligned_cols=31  Identities=29%  Similarity=0.254  Sum_probs=27.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      -++|+|+|+.|+.++..|..+|. +|.++...
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            37899999999999999999999 89998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.58  E-value=0.28  Score=40.45  Aligned_cols=33  Identities=24%  Similarity=0.365  Sum_probs=30.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      .+.+|+|.|-|.+|..+++++...|+ +|++++.
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            57899999999999999999999999 8988863

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=88.31  E-value=1.6  Score=31.63  Aligned_cols=39  Identities=28%  Similarity=0.384  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKF  190 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~  190 (339)
                      ...+|.|+|+|.+|..++..+...| +.+++.++.++++.
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3468999999999999888777776 34899999877653

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.31  E-value=0.23  Score=38.75  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=26.9

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|+.|+.++..|...|. +|.++...
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999999 88888754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.24  E-value=0.36  Score=37.03  Aligned_cols=86  Identities=17%  Similarity=0.133  Sum_probs=56.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+.+|.|+|.|.+|...+++++.+|+ +|+..++.....       .......     .++.+.+.+     .|++.-+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~-----~~l~ell~~-----sDii~i~~  104 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV-----QHLSDLLNM-----SDVVSLHV  104 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC-----SCHHHHHHH-----CSEEEECC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh-----hhHHHHHhh-----ccceeecc
Confidence            57899999999999999999999999 999998653211       1111111     233333333     58887665


Q ss_pred             CC-HH----HHHHHHHHhhcCCcEEEEecc
Q 019535          232 GL-AS----LVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~-~~----~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +- +.    .-+..++.|+++ ..+|.++.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         105 PENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             CSSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             cCCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence            42 21    134667778776 77666653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=88.22  E-value=0.29  Score=39.24  Aligned_cols=35  Identities=29%  Similarity=0.378  Sum_probs=31.1

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .+.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            35689999999999999999999999999888754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.99  E-value=0.23  Score=38.12  Aligned_cols=33  Identities=15%  Similarity=0.079  Sum_probs=28.2

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ...|+|+|+|+.|+.++..+...|. ++++++..
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            3579999999999999999999999 78888643

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.97  E-value=0.24  Score=38.90  Aligned_cols=31  Identities=32%  Similarity=0.302  Sum_probs=27.2

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|+.|+.++..|...|. +|++++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            7889999999999999999999 888887543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.90  E-value=0.46  Score=36.23  Aligned_cols=70  Identities=11%  Similarity=0.124  Sum_probs=46.6

Q ss_pred             CCCCCEEEEE--ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhc
Q 019535          150 VEVGSTVVIF--GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       150 ~~~~~~VLI~--G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ...+.+||-+  |.|.+|.-++    +.|++.|+.++.+++..+.+++    ++..   .++.      .+..+.+..+.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~------~D~~~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRK------MDANRALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE------SCHHHHHHHHH
T ss_pred             hcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccc------ccchhhhhhhc
Confidence            4568888888  4477777543    4688899999999988877754    4532   2332      34555555432


Q ss_pred             -CC-CccEEEE
Q 019535          221 -DG-GADYCFE  229 (339)
Q Consensus       221 -~g-~~d~v~d  229 (339)
                       .+ .||+||-
T Consensus       109 ~~~~~fDlIfl  119 (182)
T d2fhpa1         109 EEKLQFDLVLL  119 (182)
T ss_dssp             HTTCCEEEEEE
T ss_pred             ccCCCcceEEe
Confidence             34 8999983

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.89  E-value=0.25  Score=38.95  Aligned_cols=31  Identities=29%  Similarity=0.298  Sum_probs=27.7

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|+.|+.++..+...|. +|.+++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            7888999999999999999999 899997644

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.76  E-value=0.77  Score=32.64  Aligned_cols=62  Identities=19%  Similarity=0.201  Sum_probs=48.2

Q ss_pred             HHHhcCCCCCCEEEEE-ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCC
Q 019535          144 AWRTANVEVGSTVVIF-GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  205 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~-G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~  205 (339)
                      .++.+++..-+.+++. ..-..-..+.++++.+|.+++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4566777776666554 3334567888899999998899999999999999999999988643

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.76  E-value=0.25  Score=41.09  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=29.1

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      -.|+|+|+|..|++++..++..|. .+++++..+
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            358999999999999999999999 899888754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=87.75  E-value=0.44  Score=40.49  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=25.6

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      +|||+|+ |-+|..++..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            5899987 999999999888889855666654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.74  E-value=0.44  Score=36.61  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=32.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      +|.|+|.|-+|+.++.++ +.|. +|++++.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999887666 5799 99999999998887764

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=87.71  E-value=0.2  Score=42.04  Aligned_cols=31  Identities=29%  Similarity=0.297  Sum_probs=25.7

Q ss_pred             EEEEccCHHHHHHHHHHH-----HcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGAR-----LCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~-----~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|+.|++++.++.     ..|. +|+++++.+
T Consensus        10 V~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            899999999999887773     5699 899988654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.38  E-value=2.4  Score=29.65  Aligned_cols=91  Identities=15%  Similarity=0.035  Sum_probs=58.6

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  234 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~  234 (339)
                      .++|.|.|.+|+.+++-++  +. .|++++.++++.+.++..|... +..+.    .-.+.+++..-..++.++-+....
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~-i~Gd~----~~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANF-VHGDP----TRVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEE-EESCT----TSHHHHHHTTCTTCSEEEECCSSH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccc-ccccc----CCHHHHHHhhhhcCcEEEEeccch
Confidence            5788899999998877664  44 6777888889888888888644 43332    223455554434789999888765


Q ss_pred             HH---HHHHHHHhhcCCcEEEEe
Q 019535          235 SL---VQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       235 ~~---~~~~~~~l~~~~G~~v~~  254 (339)
                      ..   .-...+.+.+. .+++..
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEE
Confidence            42   22333445554 454444

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=87.35  E-value=1.4  Score=32.87  Aligned_cols=94  Identities=24%  Similarity=0.379  Sum_probs=59.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhc----C---C-------------c--eEEeCCCCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRF----G---V-------------T--EFVNSKNCGD  209 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~----g---a-------------~--~vi~~~~~~~  209 (339)
                      +|.|.|-|-+|+++.+.+...+. +++++..   +.+...++-++    |   .             .  ++.+.++  +
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~--p   78 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK--P   78 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS--G
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC--h
Confidence            58899999999999999888888 6777753   23444444322    1   0             0  1111111  0


Q ss_pred             ccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          210 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       210 ~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .    .+ .|..-++|+|+||+|.-...+.+...+..+ -+-|++..+
T Consensus        79 ~----~i-~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP  120 (169)
T d1dssg1          79 E----NI-PWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAP  120 (169)
T ss_dssp             G----GC-CHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSC
T ss_pred             H----HC-CccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCC
Confidence            1    11 111117999999999866677888888876 666666553

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=87.29  E-value=0.93  Score=33.85  Aligned_cols=83  Identities=19%  Similarity=0.198  Sum_probs=52.5

Q ss_pred             EEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  233 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~  233 (339)
                      +|.|+|.|.+|...+...+.. ++ +++++.....+.     .....+..+.+     .    ..+ ...+|+|+.|++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~-----~~~~~~~~~~~-----~----~~~-~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATL-----DTKTPVFDVAD-----V----DKH-ADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCC-----SSSSCEEEGGG-----G----GGT-TTTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEeccccc-----ccccccccchh-----h----hhh-ccccceEEEeCCC
Confidence            689999999999888777765 56 566555332211     11122222222     1    111 1268999999998


Q ss_pred             HHHHHHHHHHhhcCCcEEEEe
Q 019535          234 ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       234 ~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      ....+.+.++|..+ -.++..
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEECC
T ss_pred             cccHHHHHHHHHCC-CcEEEe
Confidence            87788999999995 555543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=87.09  E-value=0.82  Score=36.73  Aligned_cols=99  Identities=16%  Similarity=0.085  Sum_probs=62.3

Q ss_pred             HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHH----hcCC-ce--EEeCCCCCCccHHHH
Q 019535          144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGK----RFGV-TE--FVNSKNCGDKSVSQI  215 (339)
Q Consensus       144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~----~~ga-~~--vi~~~~~~~~~~~~~  215 (339)
                      +.+...++...+||-+|+|. |..+..++++. +. ++++++. ++..+.++    +.|. ++  +...+.      .  
T Consensus        73 ~~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~------~--  141 (256)
T d1qzza2          73 PADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDF------F--  141 (256)
T ss_dssp             HHHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT------T--
T ss_pred             HHhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeec------c--
Confidence            34445567778999998864 88999999988 45 8899985 55554443    3342 22  222211      0  


Q ss_pred             HHHhcCCCccEEEEc-----CCCH---HHHHHHHHHhhcCCcEEEEecc
Q 019535          216 IIDMTDGGADYCFEC-----VGLA---SLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       216 l~~~~~g~~d~v~d~-----~g~~---~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                        +-...++|+++-.     .+.+   ..++.+.+.|+++ |+++++..
T Consensus       142 --~~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         142 --KPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             --SCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             --ccccccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence              1112268988732     1222   3477889999998 99998864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=87.08  E-value=0.22  Score=40.57  Aligned_cols=60  Identities=20%  Similarity=0.386  Sum_probs=37.0

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG  232 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g  232 (339)
                      +|||.|+ |-+|...+..+...|.  ++++.+....      +    ..|..+   .   +.+.+...+ .+|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~----~~Dl~~---~---~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------F----CGDFSN---P---KGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------S----CCCTTC---H---HHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------c----cCcCCC---H---HHHHHHHHHcCCCEEEEecc
Confidence            5899987 9999999888777774  5555543221      1    112222   1   233333334 7899999886

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.04  E-value=0.24  Score=41.11  Aligned_cols=32  Identities=16%  Similarity=0.313  Sum_probs=28.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            48999999999999999988898 899998754

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.02  E-value=2.1  Score=35.45  Aligned_cols=101  Identities=19%  Similarity=0.234  Sum_probs=60.6

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHH----HhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..+.+++|++||-..+++ |.=+.+++..++ -..+++.+.++.+...+    +++|...++....   ....   ....
T Consensus       110 ~~l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~---d~~~---~~~~  182 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS---SSLH---IGEL  182 (313)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS---CGGG---GGGG
T ss_pred             hcccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc---cccc---cccc
Confidence            345788999998884432 222334444443 22799999999887666    4577665544333   1110   0122


Q ss_pred             CCCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 019535          221 DGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       221 ~g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .+.||.|+ |  |+|.                         ...+..+++.++++ |++|-.
T Consensus       183 ~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYs  243 (313)
T d1ixka_         183 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYS  243 (313)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEe
Confidence            33789887 5  6665                         22467788888886 765544

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.92  E-value=1.1  Score=31.29  Aligned_cols=88  Identities=14%  Similarity=0.073  Sum_probs=51.2

Q ss_pred             CCCEEEEEccCH--HH---------HHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535          152 VGSTVVIFGLGS--IG---------LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  220 (339)
Q Consensus       152 ~~~~VLI~G~G~--iG---------~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~  220 (339)
                      ..++|||+|+|+  +|         .-+++-+|..|. +++.+..+|+....--.. +++++- ..   - ..+.+.+..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYf-ep---l-t~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYF-EP---V-TLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEEC-CC---C-SHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEE-cc---C-CHHHHHHHH
Confidence            357899999864  33         344555667799 899998888755321111 344432 11   1 122333333


Q ss_pred             CC-CccEEEEcCCCHHHHHHHHHHhhc
Q 019535          221 DG-GADYCFECVGLASLVQEAYACCRK  246 (339)
Q Consensus       221 ~g-~~d~v~d~~g~~~~~~~~~~~l~~  246 (339)
                      .. .+|.|+-..|+...++.+.++-..
T Consensus        76 ~~E~p~~ii~~~GGQtalnla~~L~~~  102 (121)
T d1a9xa4          76 RIEKPKGVIVQYGGQTPLKLARALEAA  102 (121)
T ss_dssp             HHHCCSEEECSSSTHHHHTTHHHHHHT
T ss_pred             HHhCCCEEEeehhhhhHHHHHHHHHHc
Confidence            23 678888888887766665554433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=86.87  E-value=2.7  Score=31.28  Aligned_cols=94  Identities=16%  Similarity=0.247  Sum_probs=55.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHc---CCCEEEEEcCC--hhHHHHHHhc----CC------------------ceEEeCCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC---GATRIIGVDVI--SEKFEIGKRF----GV------------------TEFVNSKNC  207 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~---G~~~Vi~~~~~--~~~~~~~~~~----ga------------------~~vi~~~~~  207 (339)
                      +|.|.|-|-+|+++.+.+...   .. +|+++...  .+...++-++    |.                  .++.+.++.
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999877643   35 77777432  3344444221    10                  112222210


Q ss_pred             CCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          208 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       208 ~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      ..-+|    .++   ++|+|+||+|.-...+.+...+..+ -+-|+++.+
T Consensus        81 ~~i~W----~~~---gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP  122 (169)
T d1hdgo1          81 SKLPW----KDL---GVDFVIESTGVFRNREKAELHLQAG-AKKVIITAP  122 (169)
T ss_dssp             GGSCH----HHH---TCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             hhCCc----ccc---CCCEEEEecceeccccchhhhccCC-CceEEEecc
Confidence            00111    111   7999999999866577888888875 555666543

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.83  E-value=0.28  Score=38.27  Aligned_cols=30  Identities=20%  Similarity=0.302  Sum_probs=26.8

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|+.|+.|+..|...|. +|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999999 88888753

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.57  E-value=0.32  Score=39.23  Aligned_cols=32  Identities=22%  Similarity=0.113  Sum_probs=27.9

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      -|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38999999999999988888898 899998753

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.54  E-value=0.33  Score=37.78  Aligned_cols=30  Identities=40%  Similarity=0.382  Sum_probs=26.8

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ++|+|+|+.|+.++..+..+|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999999 88888753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.48  E-value=0.28  Score=40.90  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=27.7

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|..|+.++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 899998643

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.43  E-value=0.33  Score=35.57  Aligned_cols=90  Identities=14%  Similarity=-0.011  Sum_probs=51.8

Q ss_pred             EEEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          155 TVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      +|.|+|+ |-+|+-.++++..++  ..++..+.++....+.+...+.+..  .     .+.    ....-.+.|++|-|.
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~--~-----~~~----~~~~~~~~d~vf~a~   72 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLR--V-----GDV----DSFDFSSVGLAFFAA   72 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEE--C-----EEG----GGCCGGGCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccch--h-----ccc----hhhhhccceEEEecC
Confidence            6899998 999999999986443  2256655544322211111111111  1     111    010111689999999


Q ss_pred             CCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          232 GLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      +.....+..-.....+ -++++.+.
T Consensus        73 p~~~s~~~~~~~~~~g-~~VID~Ss   96 (144)
T d2hjsa1          73 AAEVSRAHAERARAAG-CSVIDLSG   96 (144)
T ss_dssp             CHHHHHHHHHHHHHTT-CEEEETTC
T ss_pred             CcchhhhhccccccCC-ceEEeech
Confidence            9887566666666665 67777654

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.37  E-value=0.39  Score=37.76  Aligned_cols=33  Identities=15%  Similarity=0.104  Sum_probs=26.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHc--CCCEEEEEcCChh
Q 019535          155 TVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISE  188 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~--G~~~Vi~~~~~~~  188 (339)
                      +|+|+|+|+.|+.|++.++..  |+ +|++.+..+.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            799999999999999866543  77 8998887653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=86.36  E-value=0.28  Score=39.88  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=30.3

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      ..+|||+|+ |-+|...+..+...|. +|+++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence            467999987 9999999999989999 8999988643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=86.19  E-value=0.44  Score=39.12  Aligned_cols=36  Identities=28%  Similarity=0.365  Sum_probs=30.8

Q ss_pred             CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535          152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISE  188 (339)
Q Consensus       152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~  188 (339)
                      .|+++||.|+ |  ++|.+.++.+...|+ +|+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            5788999986 4  799999999999999 8988887654

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.08  E-value=5.4  Score=32.24  Aligned_cols=55  Identities=20%  Similarity=0.171  Sum_probs=36.8

Q ss_pred             HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC--ChhHHHHHHhcCCce
Q 019535          146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTE  200 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~~ga~~  200 (339)
                      +...++++.+|...++|..|.+++..++.+|.+-++.+..  ++.+...++.+|+.-
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v  110 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANL  110 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEE
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccce
Confidence            3345566666555577999999999999999853333332  345666677777653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.07  E-value=0.86  Score=33.40  Aligned_cols=38  Identities=18%  Similarity=0.232  Sum_probs=32.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  189 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~  189 (339)
                      +..+|-|+|+|.+|..++.++...+..+++.++.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999998888888888899999987654

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.97  E-value=3.7  Score=33.29  Aligned_cols=47  Identities=21%  Similarity=0.221  Sum_probs=33.4

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcC--ChhHHHHHHhcCCceEE
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFV  202 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~~ga~~vi  202 (339)
                      |....+|+.|.+++..++.+|.+-++.+..  ++.+.+.++.+|+.-++
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence            333356999999999999999854444432  45677888888886444

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.90  E-value=0.3  Score=38.50  Aligned_cols=29  Identities=34%  Similarity=0.489  Sum_probs=26.5

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      |+|+|+|+.|+.++..|...|. +|.+++.
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            7889999999999999999999 8888874

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.77  E-value=0.92  Score=37.77  Aligned_cols=32  Identities=31%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             EE-EEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          155 TV-VIFGL-GSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~V-LI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      +| ||+|+ |-+|..++..+...|+ +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57 99987 9999999999888999 999998754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.76  E-value=0.84  Score=33.58  Aligned_cols=91  Identities=14%  Similarity=0.096  Sum_probs=55.7

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCC--CEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCF  228 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~--~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~  228 (339)
                      |-+|.|+|+ |-+|.-.++++..+..  .++....++....+........ ...+..+   .++         ...|++|
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~---~~~---------~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE---TAF---------EGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT---TTT---------TTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch---hhh---------hhhhhhh
Confidence            357999998 9999999999988743  2454444332211111111111 1111111   111         2589999


Q ss_pred             EcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535          229 ECVGLASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       229 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      -+.+.....+...+....+ -++|+.+.
T Consensus        69 ~~~~~~~s~~~~~~~~~~~-~~VIDlSs   95 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAG-VVVVDNTS   95 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred             hccCccchhhHHhhhcccc-ceehhcCh
Confidence            9999887677777788886 88888874

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.64  E-value=0.38  Score=39.69  Aligned_cols=31  Identities=32%  Similarity=0.486  Sum_probs=27.5

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|..|+.++.-|...|+ +|++++..+
T Consensus        19 VlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            8999999999999999999999 899988643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.61  E-value=0.32  Score=36.61  Aligned_cols=27  Identities=41%  Similarity=0.539  Sum_probs=24.2

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGAT  178 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~~  178 (339)
                      .+++|+|+|+|.+|.-++..++.+|.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence            467899999999999999999999983

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.56  E-value=5.7  Score=29.72  Aligned_cols=104  Identities=16%  Similarity=0.209  Sum_probs=65.1

Q ss_pred             HhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhcCC
Q 019535          146 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       146 ~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      +...++++..+ |-++ |.=|. +..++.. +. +|++++++++..+.++..-..  ..+...-   .++.+.+.....+
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~~~   84 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGVE   84 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTCS
T ss_pred             HhcCCCCCCEE-EEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcCCC
Confidence            44567788765 4444 44354 3444444 55 899999999998888764322  3444443   5565555554434


Q ss_pred             CccEEE-EcCCCHH--------------HHHHHHHHhhcCCcEEEEeccC
Q 019535          223 GADYCF-ECVGLAS--------------LVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       223 ~~d~v~-d~~g~~~--------------~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .+|.|+ |..-++.              .++...+.+.++ |+++.+...
T Consensus        85 ~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh  133 (182)
T d1wg8a2          85 RVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH  133 (182)
T ss_dssp             CEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred             ccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence            788886 6432222              367778889997 888887654

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.49  E-value=2.4  Score=35.97  Aligned_cols=97  Identities=14%  Similarity=0.117  Sum_probs=62.4

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--------------EEeCCCCCCccHHH
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--------------FVNSKNCGDKSVSQ  214 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--------------vi~~~~~~~~~~~~  214 (339)
                      +.+||- +-++.|.-++++|+..|.++|++.+.+++..+.+++    .+...              .+....   .+...
T Consensus        46 ~~~vLD-~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~---~Da~~  121 (375)
T d2dula1          46 PKIVLD-ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH---DDANR  121 (375)
T ss_dssp             CSEEEE-SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE---SCHHH
T ss_pred             CCEEEE-cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh---hhhhh
Confidence            444444 434568888999998898899999999998888864    12111              011111   22322


Q ss_pred             HHHHhcCCCccEE-EEcCCCHH-HHHHHHHHhhcCCcEEEEec
Q 019535          215 IIIDMTDGGADYC-FECVGLAS-LVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       215 ~l~~~~~g~~d~v-~d~~g~~~-~~~~~~~~l~~~~G~~v~~g  255 (339)
                      .+ ...+..||+| +|..|++. -++.++++++++ |.+....
T Consensus       122 ~~-~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         122 LM-AERHRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             HH-HHSTTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hh-HhhcCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            22 2223379988 59998743 388999999996 7766654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=85.25  E-value=1.7  Score=32.25  Aligned_cols=94  Identities=19%  Similarity=0.293  Sum_probs=61.1

Q ss_pred             cccchhhhhhHHHHHhcCC-CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCC
Q 019535          132 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  209 (339)
Q Consensus       132 ~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~  209 (339)
                      .+||.....+. +++..++ -.|++|+|+|- ..+|.-++.++...|+ .|+...+..                      
T Consensus        16 ~~PcTp~aI~~-lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t----------------------   71 (166)
T d1b0aa1          16 LRPCTPRGIVT-LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------   71 (166)
T ss_dssp             SCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------
T ss_pred             CCCchHHHHHH-HHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------
Confidence            45543333333 4444443 46899999997 6899999999999999 777665321                      


Q ss_pred             ccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          210 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       210 ~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .++.+.+++     +|+++-++|.+..+.  -+.++++ -.++.+|..
T Consensus        72 ~~l~~~~~~-----ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          72 KNLRHHVEN-----ADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCHHHHHHH-----CSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             chhHHHHhh-----hhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            233333433     689999999876332  2356675 778888764

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.96  E-value=0.26  Score=40.06  Aligned_cols=45  Identities=18%  Similarity=0.035  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      +...+.++|-+|+|+ |...+..+...+. +|++++-++...+.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            455788999999875 4444444444444 89999999999888865

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.91  E-value=2.8  Score=34.70  Aligned_cols=100  Identities=17%  Similarity=0.139  Sum_probs=58.8

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC--ChhHHHHHHhcCCceEEeCCCCCCcc-----------------
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSKNCGDKS-----------------  211 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~~ga~~vi~~~~~~~~~-----------------  211 (339)
                      ....+|+...+|..|.+++..++..|.+-++.+..  ++++.+.++.+|++-+....+   .+                 
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~---~~~~~~~~~~~~~~~~~~~  149 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN---FDEAKAKAIELSQQQGFTW  149 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS---HHHHHHHHHHHHHHHCCEE
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcc---cccchhhhhhhhhcCCCcc
Confidence            34444555566888999999999999943333322  345677778888764433222   11                 


Q ss_pred             ---------------HHHHHHHhcCCCccEEEEcCCCHHHH---HHHHHHhhcCCcEEEEec
Q 019535          212 ---------------VSQIIIDMTDGGADYCFECVGLASLV---QEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       212 ---------------~~~~l~~~~~g~~d~v~d~~g~~~~~---~~~~~~l~~~~G~~v~~g  255 (339)
                                     +..++.+.. +.+|.||-++|+...+   -..++.+.+. .+++.+.
T Consensus       150 ~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve  209 (331)
T d1tdja1         150 VPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE  209 (331)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             ccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence                           111222221 3689999888764433   3444455565 6777764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=84.84  E-value=0.38  Score=34.28  Aligned_cols=81  Identities=17%  Similarity=0.108  Sum_probs=47.8

Q ss_pred             CEEEEEccCHHHHHHHHHHH-HcCCCEEEEEcC-ChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535          154 STVVIFGLGSIGLAVAEGAR-LCGATRIIGVDV-ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  231 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~-~~G~~~Vi~~~~-~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~  231 (339)
                      .+|+|+|+|.+|.+.+...+ ..++ ++++... ++++.  -+...--.|+..+     ++    .+.....+++++-++
T Consensus         4 ~~v~I~GaG~~G~~l~~~l~~~~~~-~iv~fiDdd~~k~--G~~I~Gi~V~~~~-----~l----~~~~~~~i~iai~~i   71 (126)
T d2dt5a2           4 WGLCIVGMGRLGSALADYPGFGESF-ELRGFFDVDPEKV--GRPVRGGVIEHVD-----LL----PQRVPGRIEIALLTV   71 (126)
T ss_dssp             EEEEEECCSHHHHHHHHCSCCCSSE-EEEEEEESCTTTT--TCEETTEEEEEGG-----GH----HHHSTTTCCEEEECS
T ss_pred             ceEEEEcCCHHHHHHHHhHhhcCCc-EEEEEEeCchHhc--CCEECCEEEecHH-----HH----HHHHhhcccEEEEeC
Confidence            47999999999997765432 3466 6666553 33222  1222223555432     22    233334688999888


Q ss_pred             CCHHHHHHHHHHhhcC
Q 019535          232 GLASLVQEAYACCRKG  247 (339)
Q Consensus       232 g~~~~~~~~~~~l~~~  247 (339)
                      +... .++..+.|-..
T Consensus        72 ~~~~-~~~I~d~l~~~   86 (126)
T d2dt5a2          72 PREA-AQKAADLLVAA   86 (126)
T ss_dssp             CHHH-HHHHHHHHHHH
T ss_pred             CHHH-HHHHHHHHHHc
Confidence            8777 66666666553

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.48  E-value=0.51  Score=39.47  Aligned_cols=33  Identities=18%  Similarity=0.233  Sum_probs=26.5

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCCh
Q 019535          154 STVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVIS  187 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~  187 (339)
                      ++|+|+|+|+.|++++..++..|  . +|++..+++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~-~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFD-QVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCS-EEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCC-CEEEEECCC
Confidence            58999999999998886665544  5 899988764

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.31  E-value=0.061  Score=43.53  Aligned_cols=44  Identities=18%  Similarity=0.052  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      ..++.+||-+|+|. |..++.++.. +...|++++.++...+.+++
T Consensus        49 ~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          49 GLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             SCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            45678899989874 5544445444 44489999999999888865

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.27  E-value=0.49  Score=38.81  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=26.3

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      .|+|+|+|.+|++++..+...|.++|.+++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            48999999999988877767886468888765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.20  E-value=0.48  Score=38.31  Aligned_cols=30  Identities=30%  Similarity=0.503  Sum_probs=26.8

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      |+|+|+|.+|+.++.-+...|. +|++++..
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            8899999999999988888999 89999864

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.11  E-value=0.41  Score=37.07  Aligned_cols=69  Identities=16%  Similarity=0.259  Sum_probs=43.0

Q ss_pred             CCEEEEEcc-CHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535          153 GSTVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  230 (339)
Q Consensus       153 ~~~VLI~G~-G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~  230 (339)
                      .++|||+|+ |-+|...++.+...|.. +|++..+++..       .... +....   .++.+ +.....+..|.||.|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~-~~~~~---~d~~~-~~~~~~~~~d~vi~~   69 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPR-LDNPV---GPLAE-LLPQLDGSIDTAFCC   69 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTT-EECCB---SCHHH-HGGGCCSCCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hccc-ccccc---cchhh-hhhccccchheeeee
Confidence            368999987 99999999988888852 56666654311       0111 12222   23333 333333478999999


Q ss_pred             CCC
Q 019535          231 VGL  233 (339)
Q Consensus       231 ~g~  233 (339)
                      +|.
T Consensus        70 ~g~   72 (212)
T d2a35a1          70 LGT   72 (212)
T ss_dssp             CCC
T ss_pred             eee
Confidence            876

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=84.00  E-value=3.9  Score=30.46  Aligned_cols=94  Identities=19%  Similarity=0.269  Sum_probs=55.4

Q ss_pred             EEEEEccCHHHHHHHHHHHHc----CCCEEEEEcC--ChhHHHHHHhc----C---C-------------c--eEEeCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC----GATRIIGVDV--ISEKFEIGKRF----G---V-------------T--EFVNSKN  206 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~----G~~~Vi~~~~--~~~~~~~~~~~----g---a-------------~--~vi~~~~  206 (339)
                      +|.|.|-|-+|++.++.+-..    .. +|+++..  +.+....+-++    |   .             .  .++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578889999999999876543    23 5666653  33344444221    1   0             0  1121111


Q ss_pred             CCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          207 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       207 ~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        +.    .+ .|..-++|+|+||+|.-...+.+.+.|..+ -+-|++..+
T Consensus        82 --p~----~i-~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP  124 (173)
T d1obfo1          82 --PA----QL-PWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAP  124 (173)
T ss_dssp             --GG----GS-CTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSC
T ss_pred             --HH----HC-cccccccceEEEecccccCHHHHHHHhccC-CcceEEecC
Confidence              01    11 122228999999999755567788888886 666676654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=83.81  E-value=0.71  Score=37.95  Aligned_cols=31  Identities=23%  Similarity=0.270  Sum_probs=26.4

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      ++|||+|+ |-+|...++.+...|. .+++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecC
Confidence            57999987 9999999999988898 7776654

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.76  E-value=4.3  Score=29.97  Aligned_cols=94  Identities=16%  Similarity=0.179  Sum_probs=57.0

Q ss_pred             EEEEEccCHHHHHHHHHHHHc-CCCEEEEEcC---ChhHHHHHHhc----C---C---------------ceEEeCCCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDV---ISEKFEIGKRF----G---V---------------TEFVNSKNCG  208 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~---~~~~~~~~~~~----g---a---------------~~vi~~~~~~  208 (339)
                      +|.|.|=|-+|+++.+.+... .. +|+++..   +.+...++-++    |   .               ..++..++  
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~--   78 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD--   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS--
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC--
Confidence            578899999999999987654 45 6777643   23455555332    1   0               01122121  


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      +.++  .+.+   -++|+|+||+|.-...+.+...+..+ -+-|++..+
T Consensus        79 p~~i--~W~~---~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP  121 (166)
T d2b4ro1          79 PSQI--PWGK---CQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAP  121 (166)
T ss_dssp             GGGC--CHHH---HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSC
T ss_pred             hHHc--cccc---cCCCEEEEecccccchhhhhhhhccC-CCEEEEecc
Confidence            1110  0111   17999999999866567788888876 656666544

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=83.72  E-value=1.2  Score=33.64  Aligned_cols=85  Identities=15%  Similarity=0.065  Sum_probs=51.0

Q ss_pred             CCCEEEEE--ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhcCC
Q 019535          152 VGSTVVIF--GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDG  222 (339)
Q Consensus       152 ~~~~VLI~--G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~~g  222 (339)
                      .+.++|-+  |+|.+|.-|+    +.|++.|+.++.+.+..+.+++    ++..   ..+..     .+..+.++.....
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~-----~d~~~~l~~~~~~  113 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN-----QSSLDFLKQPQNQ  113 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC-----SCHHHHTTSCCSS
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhccccccccccc-----ccccccccccccC
Confidence            56678887  5588887655    6799999999999888776654    5531   22222     3444444443334


Q ss_pred             -CccEEE-EcCCCHHHHHHHHHHhh
Q 019535          223 -GADYCF-ECVGLASLVQEAYACCR  245 (339)
Q Consensus       223 -~~d~v~-d~~g~~~~~~~~~~~l~  245 (339)
                       .||+|| |.==.....+..++.+.
T Consensus       114 ~~fDlIFlDPPY~~~~~~~~l~~l~  138 (183)
T d2ifta1         114 PHFDVVFLDPPFHFNLAEQAISLLC  138 (183)
T ss_dssp             CCEEEEEECCCSSSCHHHHHHHHHH
T ss_pred             CcccEEEechhHhhhhHHHHHHHHH
Confidence             799998 53322222444444443

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.46  E-value=2.1  Score=35.52  Aligned_cols=93  Identities=15%  Similarity=0.114  Sum_probs=60.1

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHH-HcCCCEEEEEcCChhHHHHH----HhcCCceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD  225 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d  225 (339)
                      +...++.|+|+|..+..-++... ....++|.+..+++++.+..    +..+.....+        ..+.+     .+.|
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--------~~~a~-----~~aD  189 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--------PAEEA-----SRCD  189 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--------CHHHH-----TSSS
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--------hhhhh-----cccc
Confidence            45678899999988877766554 45777999999998876554    3344433221        11222     2589


Q ss_pred             EEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535          226 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  258 (339)
Q Consensus       226 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  258 (339)
                      +|+-|+.+...+ .-.+.++++ -++..+|...
T Consensus       190 iV~taT~s~~P~-~~~~~l~~G-~hv~~iGs~~  220 (320)
T d1omoa_         190 VLVTTTPSRKPV-VKAEWVEEG-THINAIGADG  220 (320)
T ss_dssp             EEEECCCCSSCC-BCGGGCCTT-CEEEECSCCS
T ss_pred             EEEEeccCcccc-cchhhcCCC-CeEeecCCcc
Confidence            999888764321 112357886 7888888654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.39  E-value=2.3  Score=35.16  Aligned_cols=30  Identities=23%  Similarity=0.213  Sum_probs=26.8

Q ss_pred             CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 019535          154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVD  184 (339)
Q Consensus       154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~  184 (339)
                      ++|||+|+ |-+|...+..+...|. +|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999987 9999999999888998 888885

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.38  E-value=0.4  Score=37.63  Aligned_cols=33  Identities=12%  Similarity=0.160  Sum_probs=27.4

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcC-------CCEEEEEcCCh
Q 019535          154 STVVIFGLGSIGLAVAEGARLCG-------ATRIIGVDVIS  187 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G-------~~~Vi~~~~~~  187 (339)
                      .+|+|+|+|+.|++|+..+...|       + +|.+.+..+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~-~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCC-ceEEEecCC
Confidence            48999999999999998887776       4 688887655

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.27  E-value=1.8  Score=33.16  Aligned_cols=46  Identities=26%  Similarity=0.306  Sum_probs=32.5

Q ss_pred             cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535          148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  195 (339)
Q Consensus       148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  195 (339)
                      .+--.|.+||-.|+|. |.+++.++ ..|+.+|++++.+++..+.+++
T Consensus        42 ~~dl~g~~vLDlg~Gt-G~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~   87 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGT-GVLSYGAL-LLGAKEVICVEVDKEAVDVLIE   87 (201)
T ss_dssp             TTSSTTCEEEEETCTT-CHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCCEEEECcCcc-hHHHHHHH-HcCCCEEEEEcCcHHHHHHHHH
Confidence            3444688999998752 44444433 4677699999999988887764

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.92  E-value=1.6  Score=34.07  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      +--..+++++.|+|..|...+++....+.++++.+++.
T Consensus        22 ~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          22 KKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             CCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            33467899999999999999999999999899999864

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.81  E-value=0.52  Score=39.11  Aligned_cols=31  Identities=35%  Similarity=0.539  Sum_probs=27.2

Q ss_pred             EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      -|+|+|+|..|+.++.-|...|+ +|++++..
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38999999999999988888999 89998764

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=82.75  E-value=0.53  Score=39.10  Aligned_cols=31  Identities=45%  Similarity=0.592  Sum_probs=27.5

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|..|+.++.-|...|+ +|++++..+
T Consensus        26 VvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             EEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            8999999999999988888999 899998643

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.66  E-value=7.2  Score=28.60  Aligned_cols=90  Identities=12%  Similarity=0.086  Sum_probs=50.8

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC--CC-EEEEEcCChhH---------------HHHHHhcCCceEEeCCCCCCccHHHHH
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG--AT-RIIGVDVISEK---------------FEIGKRFGVTEFVNSKNCGDKSVSQII  216 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G--~~-~Vi~~~~~~~~---------------~~~~~~~ga~~vi~~~~~~~~~~~~~l  216 (339)
                      +|.|+|.|.+|...+++.....  .+ +++++..+...               .+.+.....      ..   .......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~---~~~~~~~   76 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KT---LPLDDLI   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BC---CCHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cc---ccHHHHH
Confidence            5788899999999988776543  21 55555433211               111111110      00   1122222


Q ss_pred             HHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535          217 IDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  255 (339)
Q Consensus       217 ~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g  255 (339)
                      ...... ..++++||.++....+...+.|..+  .-|...
T Consensus        77 ~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G--~hVVTA  114 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSAYIAGFYTKFVENG--ISIATP  114 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCHHHHTTHHHHHHTT--CEEECC
T ss_pred             HHhccCCCceEEEEecCChHHHHHHHHHHHcC--CeEEec
Confidence            223333 6788999999988777777888875  444443

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.23  E-value=0.65  Score=37.24  Aligned_cols=30  Identities=30%  Similarity=0.374  Sum_probs=27.1

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  186 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~  186 (339)
                      ++|+|+|+.|+.++..|...|. +|..++..
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence            6888999999999999999999 89999854

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.15  E-value=1.3  Score=36.84  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=29.3

Q ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535          152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  185 (339)
Q Consensus       152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~  185 (339)
                      ...++||+|+ |-+|...+..+...|. +|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            4568999987 9999999999999999 9999875

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.99  E-value=5.1  Score=32.85  Aligned_cols=99  Identities=16%  Similarity=0.137  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhc-
Q 019535          149 NVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT-  220 (339)
Q Consensus       149 ~~~~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~-  220 (339)
                      +...+.+||-+.+  |..+.+   .+ ..|+ +|+.++.++...+.+++    .|.. .-+....   .|..+.+++.. 
T Consensus       129 ~~~~~~rVLdlf~~tG~~sl~---aa-~~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~---~D~~~~l~~~~~  200 (309)
T d2igta1         129 TADRPLKVLNLFGYTGVASLV---AA-AAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC---EDAMKFIQREER  200 (309)
T ss_dssp             HSSSCCEEEEETCTTCHHHHH---HH-HTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC---SCHHHHHHHHHH
T ss_pred             hccCCCeEEEecCCCcHHHHH---HH-hCCC-eEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe---CCHHHhHHHHhh
Confidence            3567889999955  544443   33 3588 89999999998888865    2321 0111112   45666665443 


Q ss_pred             CC-CccEEE-E--cCC--C-----------HHHHHHHHHHhhcCCcEEEEecc
Q 019535          221 DG-GADYCF-E--CVG--L-----------ASLVQEAYACCRKGWGKTIVLGV  256 (339)
Q Consensus       221 ~g-~~d~v~-d--~~g--~-----------~~~~~~~~~~l~~~~G~~v~~g~  256 (339)
                      .+ .||+|| |  +.+  .           ....+.+..++.++ |.++++..
T Consensus       201 ~~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~-g~~ll~t~  252 (309)
T d2igta1         201 RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK-ALGLVLTA  252 (309)
T ss_dssp             HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT-CCEEEEEE
T ss_pred             cCCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCC-CCEEEEec
Confidence            24 899997 3  111  0           22345667788887 87666544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.79  E-value=2.5  Score=30.61  Aligned_cols=89  Identities=17%  Similarity=0.150  Sum_probs=47.1

Q ss_pred             EEEEEcc-CHHHHHHHHH-HHHc--CCCEEEEEcCChhHHHHHHhcC-CceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535          155 TVVIFGL-GSIGLAVAEG-ARLC--GATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  229 (339)
Q Consensus       155 ~VLI~G~-G~iG~~a~~l-a~~~--G~~~Vi~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d  229 (339)
                      +|.|+|+ |.+|+-.+++ +...  -..+++...++..........+ ...+.+..+     .. .+     .+.|++|-
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~-----~~-~~-----~~~DivF~   71 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFD-----LE-AL-----KALDIIVT   71 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTC-----HH-HH-----HTCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccc-----hh-hh-----hcCcEEEE
Confidence            6899998 9999999974 4332  3336666665433221111111 111221111     11 11     15899999


Q ss_pred             cCCCHHHHHHHHHHhhcCCc---EEEEecc
Q 019535          230 CVGLASLVQEAYACCRKGWG---KTIVLGV  256 (339)
Q Consensus       230 ~~g~~~~~~~~~~~l~~~~G---~~v~~g~  256 (339)
                      |.+... .......+... |   .++..+.
T Consensus        72 a~~~~~-s~~~~~~~~~~-g~~~~VID~Ss   99 (146)
T d1t4ba1          72 CQGGDY-TNEIYPKLRES-GWQGYWIDAAS   99 (146)
T ss_dssp             CSCHHH-HHHHHHHHHHT-TCCCEEEECSS
T ss_pred             ecCchH-HHHhhHHHHhc-CCCeecccCCc
Confidence            999887 44444444443 4   3555543

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=81.71  E-value=0.6  Score=38.86  Aligned_cols=31  Identities=26%  Similarity=0.360  Sum_probs=27.4

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|+.|+.++--|...|+ +|+++...+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8999999999999999989999 899887643

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=2.6  Score=31.43  Aligned_cols=95  Identities=15%  Similarity=0.253  Sum_probs=61.4

Q ss_pred             ccccchhhhhhHHHHHhcCC-CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC
Q 019535          131 CLLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG  208 (339)
Q Consensus       131 a~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~  208 (339)
                      +.+||.....+. +++..++ -.|++|+|+|. ..+|.-++.++...|+ .|+.+.....                    
T Consensus        17 ~~~PcTp~aii~-lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~--------------------   74 (170)
T d1a4ia1          17 CFIPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTA--------------------   74 (170)
T ss_dssp             CCCCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS--------------------
T ss_pred             CCCCChHHHHHH-HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccc--------------------
Confidence            445654333333 4454554 36899999997 6899999999999999 8887764322                    


Q ss_pred             CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                        ++.+.++     ..|+++-++|.+..++  -+.++++ -.++++|..
T Consensus        75 --~l~~~~~-----~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          75 --HLDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             --SHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             --cHHHHHh-----hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence              2222221     3688888888766322  3467775 777777754

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.19  E-value=3.1  Score=31.94  Aligned_cols=93  Identities=15%  Similarity=0.173  Sum_probs=63.0

Q ss_pred             CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--eEEeCCCCCCccHHHHHHHhcCC-Ccc
Q 019535          153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EFVNSKNCGDKSVSQIIIDMTDG-GAD  225 (339)
Q Consensus       153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g-~~d  225 (339)
                      ...||-+|+|. |..++.+|+...-..+++++.++.....+    ++.+..  .++..+.   .++    .+.... .+|
T Consensus        32 ~plvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da---~~l----~~~~~~~~~~  103 (204)
T d1yzha1          32 NPIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG---SDL----TDYFEDGEID  103 (204)
T ss_dssp             CCEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCS---SCG----GGTSCTTCCS
T ss_pred             CCeEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCH---HHH----hhhccCCcee
Confidence            34577779874 89999999998544999999988766554    345543  3444333   232    223333 788


Q ss_pred             EEEEcCCC--------------HHHHHHHHHHhhcCCcEEEEe
Q 019535          226 YCFECVGL--------------ASLVQEAYACCRKGWGKTIVL  254 (339)
Q Consensus       226 ~v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~~  254 (339)
                      .|+-....              +..++.+.+.|.++ |.+.+.
T Consensus       104 ~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~Lkpg-G~l~i~  145 (204)
T d1yzha1         104 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN-GEIHFK  145 (204)
T ss_dssp             EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT-CEEEEE
T ss_pred             hhcccccccccchhhhhhhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            88765543              35588999999998 998765

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=80.98  E-value=3.2  Score=31.13  Aligned_cols=68  Identities=13%  Similarity=0.079  Sum_probs=43.1

Q ss_pred             CCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHHhcCCC
Q 019535          152 VGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGG  223 (339)
Q Consensus       152 ~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~~~~g~  223 (339)
                      .+.+||-+++  |.+|.-    |.+.|++.|+.++.+++..+.+++    ++..  .++.      .+..+.+.. .+..
T Consensus        43 ~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~------~d~~~~l~~-~~~~  111 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVN------SNAMSFLAQ-KGTP  111 (183)
T ss_dssp             TTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC------SCHHHHHSS-CCCC
T ss_pred             chhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeee------ecccccccc-cccc
Confidence            5678888844  666654    335688899999999988887754    4443  2332      244444432 2338


Q ss_pred             ccEEE-Ec
Q 019535          224 ADYCF-EC  230 (339)
Q Consensus       224 ~d~v~-d~  230 (339)
                      ||+|| |.
T Consensus       112 fDlIf~DP  119 (183)
T d2fpoa1         112 HNIVFVDP  119 (183)
T ss_dssp             EEEEEECC
T ss_pred             cCEEEEcC
Confidence            99998 53

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.89  E-value=0.73  Score=39.48  Aligned_cols=32  Identities=31%  Similarity=0.403  Sum_probs=24.9

Q ss_pred             EEEEEccCHHHHHHHHHHHH------cCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAEGARL------CGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~------~G~~~Vi~~~~~~  187 (339)
                      -|+|+|+|+.|++++..+..      .|. +|.++++..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCC
Confidence            38999999999887654443      688 899998753

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.81  E-value=2.8  Score=31.08  Aligned_cols=73  Identities=15%  Similarity=0.094  Sum_probs=41.6

Q ss_pred             CCCEEEEEccCHHHHH--HHHHHHHc-C--CCEEEEEcCChhHHHHH--------HhcCCc-eEEeCCCCCCccHHHHHH
Q 019535          152 VGSTVVIFGLGSIGLA--VAEGARLC-G--ATRIIGVDVISEKFEIG--------KRFGVT-EFVNSKNCGDKSVSQIII  217 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~--a~~la~~~-G--~~~Vi~~~~~~~~~~~~--------~~~ga~-~vi~~~~~~~~~~~~~l~  217 (339)
                      +.-+|.|+|+|.+|..  ...+++.. .  ...++.++.++++.+..        ...+.. .+....     +..+.+ 
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~eal-   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT-----DPEEAF-   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES-----CHHHHH-
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC-----Chhhcc-
Confidence            3457889998766533  33333322 2  13799999998876532        123443 333222     222322 


Q ss_pred             HhcCCCccEEEEcCCCH
Q 019535          218 DMTDGGADYCFECVGLA  234 (339)
Q Consensus       218 ~~~~g~~d~v~d~~g~~  234 (339)
                          .+.|+|+.++|-+
T Consensus        76 ----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVG   88 (167)
T ss_dssp             ----SSCSEEEECCCTT
T ss_pred             ----CCCCEEEECCCcC
Confidence                2689999999853

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.74  E-value=1.8  Score=31.42  Aligned_cols=38  Identities=26%  Similarity=0.342  Sum_probs=31.0

Q ss_pred             CCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhH
Q 019535          152 VGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEK  189 (339)
Q Consensus       152 ~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~  189 (339)
                      .+.+|.|+|+|.+|..++..+...+. .+++.++.++++
T Consensus         5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            46789999999999988888877664 479999987765

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=80.65  E-value=6.4  Score=29.00  Aligned_cols=94  Identities=20%  Similarity=0.263  Sum_probs=56.1

Q ss_pred             EEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCCh--hHHHHHHhc----C---C-------------c--eEEeCCCCCC
Q 019535          155 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVIS--EKFEIGKRF----G---V-------------T--EFVNSKNCGD  209 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~--~~~~~~~~~----g---a-------------~--~vi~~~~~~~  209 (339)
                      +|.|.|-|-+|+++.+.+.... . +++++....  +...++-++    |   .             .  .+...++  +
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~--p   79 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD--P   79 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--G
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC--h
Confidence            5788899999999999887664 4 677776433  223333221    1   0             0  1111111  1


Q ss_pred             ccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535          210 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  257 (339)
Q Consensus       210 ~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  257 (339)
                      .    .+ .|..-++|+|+||+|.-...+.+...+..+ -+-|+++.+
T Consensus        80 ~----~i-~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP  121 (166)
T d1gado1          80 A----NL-KWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGP  121 (166)
T ss_dssp             G----GG-CHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSC
T ss_pred             H----HC-CccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecc
Confidence            1    11 111117999999999766577788888886 666666544

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=80.56  E-value=1.5  Score=31.61  Aligned_cols=37  Identities=19%  Similarity=0.214  Sum_probs=29.5

Q ss_pred             CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 019535          154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  190 (339)
Q Consensus       154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~  190 (339)
                      .+|.|+|+|.+|..++.++...+...++.++..+++.
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~   38 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVP   38 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence            4788999999999888777666766899998876643

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.50  E-value=1.6  Score=34.54  Aligned_cols=35  Identities=26%  Similarity=0.351  Sum_probs=28.9

Q ss_pred             CCCCEEEEEccCHHHHHHHHHHH-HcCCCEEEEEcCC
Q 019535          151 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVI  186 (339)
Q Consensus       151 ~~~~~VLI~G~G~iG~~a~~la~-~~G~~~Vi~~~~~  186 (339)
                      -.+.+|+|+|-|.+|..+++++. ..|+ +|+++..+
T Consensus        30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~-kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGYGNAGYYLAKIMSEDFGM-KVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEEECS
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCc-ceeecccc
Confidence            36899999999999999998774 5788 88887643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.44  E-value=1.5  Score=31.93  Aligned_cols=47  Identities=19%  Similarity=0.173  Sum_probs=36.8

Q ss_pred             hhhhHHHHHhcCCCCCCEEEEE--ccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          138 STGVGAAWRTANVEVGSTVVIF--GLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       138 ~ta~~al~~~~~~~~~~~VLI~--G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      .|...++  ..+..+++.++|+  |+|-+|.-+++.+...|+ +|..+.+.+
T Consensus        26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence            3555533  2456678888887  778999999999999999 899998764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.21  E-value=0.71  Score=37.41  Aligned_cols=32  Identities=25%  Similarity=0.308  Sum_probs=26.3

Q ss_pred             EEEEEccCHHHHHHHH-HHHHcCCCEEEEEcCCh
Q 019535          155 TVVIFGLGSIGLAVAE-GARLCGATRIIGVDVIS  187 (339)
Q Consensus       155 ~VLI~G~G~iG~~a~~-la~~~G~~~Vi~~~~~~  187 (339)
                      -|+|+|+|+.|+.++. +|+..|. +|.+++..+
T Consensus        35 DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            3899999999988875 5566799 899999765

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=80.21  E-value=1  Score=35.51  Aligned_cols=31  Identities=26%  Similarity=0.135  Sum_probs=27.0

Q ss_pred             EEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535          156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  187 (339)
Q Consensus       156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~  187 (339)
                      |+|+|+|+.|.-|+..|..+|+ ++..+..+.
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~-ktllit~~~   35 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGV-RVGLLTQSL   35 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESCG
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEEecc
Confidence            7888999999999999999999 777776553