Citrus Sinensis ID: 019546

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MAIQSKDSSPSLMMPLSSDRKRKRRDGVNVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLNESSKDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEESDFGF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEccccccEEEEcccccHHHHHHHHHHHHHHHccccEEEccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHccccccccccccccHcccccccccccccHHHccccc
Coil and Loop (DISEMBL)
maiqskdsspslmmplssdrkrkrrdgvnvAETLERWRRYNEslesgngedkpmrrvpakgskkgcmkgkggpengrcdyrgvrqrtwGKWVAEirepnrgnrlwlgtFPSAVEAALAYDHAARamygpcarlnlpdvsrlnesskdsdsttssnqseiedakVKNDAREAESKIIaqpeaellsspvkpkakdeaednekyywgeqldckpeardepilgsicdvkpetgderkdatgidwlegydwskdemfdvndlldlldnnplcgseqqsELSYYNLqagsldqsqfgyekpldpffqlrnpdmelpvgvnyaehgasdyglqflkeeesdfgf
Flexible Loop (DISEMBL)
maiqskdsspslmmplssdrkrkrrdgvnvaetlerwrryneslesgngedkpmrrvpakgskkgcmkgkggpengrcdyrgvrQRTWGKWvaeirepnrgnrlWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLNesskdsdsttssnqseiedakvknDAREAESKiiaqpeaellsspvkpkakdeaednekyywgeqldckpeardepilgsicdvkpetgderkdatgidWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEESDFGF
Low Complexity Region (SEG)
MAIQSKdsspslmmplssdRKRKRRDGVNVAETLERWRRYNESLESGNGEDKPMRRVPAkgskkgcmkgkggPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLnesskdsdsttssnqseIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVndlldlldnnPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEESDFGF
Disordered region (IsUnstruct)
*****************************************************************************CDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNL******************************************************************YYWGEQLDCK******PILGSICDV*********DATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGS****ELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQF**********
Disordered Region (DISOPRED)
*********************************************************************************GVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP*******************************************************************************************************IDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSE*************************************************ASDYGLQFLKEEE*DF**
Disordered Region (DISEMBL)
**************************GVNVAETLERWRRYNES*****************************PENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSR********************************SKIIAQPEAELLS*************NEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLK********
Disordered Region (DISPRO)
**************************GVNVAETLERWRRYNESLE******************************GRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV*****************************************************************************************************IDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEE**F*F
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAIQSKDSSPSLMMPLSSDRKRKRRDGVNVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLNESSKDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEESDFGF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q8LFR2	341	Dehydration-responsive el	yes	no	0.705	0.700	0.438	2e-48
A2WL19	274	Dehydration-responsive el	N/A	no	0.377	0.467	0.597	5e-40
Q0JQF7	274	Dehydration-responsive el	yes	no	0.368	0.456	0.602	5e-40
Q9SIZ0	157	Putative dehydration-resp	no	no	0.345	0.745	0.669	8e-40
O82132	335	Dehydration-responsive el	no	no	0.799	0.808	0.405	3e-37
O82133	330	Dehydration-responsive el	no	no	0.469	0.481	0.530	4e-32
Q84ZA1	230	Dehydration-responsive el	no	no	0.244	0.360	0.746	1e-31
Q9LQZ2	206	Dehydration-responsive el	no	no	0.312	0.514	0.645	1e-31
P61827	307	Dehydration-responsive el	no	no	0.253	0.280	0.686	1e-29
O80917	244	Dehydration-responsive el	no	no	0.389	0.540	0.529	2e-27

>sp|Q8LFR2|DRE2C_ARATH Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2

 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/269 (43%), Positives = 159/269 (59%), Gaps = 30/269 (11%)

Query: 19  DRKRKRRDGVNVAETLERWRRYNESLES----GNGEDKPMRRVPAKGSKKGCMKGKGGPE 74
           DRKRK R   +VAE L +WR YNE +E+      G  K +R+ P KGS+KGCMKGKGGPE
Sbjct: 7   DRKRKSRGTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKPPPKGSRKGCMKGKGGPE 66

Query: 75  NGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLN 134
           NG CDYRGVRQR WGKWVAEIREP+ G RLWLGTF S+ EAALAYD AA+A+YG  ARLN
Sbjct: 67  NGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLN 126

Query: 135 LPDVSRLNESSKDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKD 194
           LP+++    SS  + +T S + +   D          ES++ A+ +    S   + K +D
Sbjct: 127 LPEITN-RSSSTAATATVSGSVTAFSD----------ESEVCAREDTNASSGFGQVKLED 175

Query: 195 EAED----NEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEG----- 245
            +++    +      E+L  K E R+E  L     +  ++  E  DA    WL G     
Sbjct: 176 CSDEYVLLDSSQCIKEELKGKEEVREEHNLAVGFGIGQDSKRETLDA----WLMGNGNEQ 231

Query: 246 --YDWSKDEMFDVNDLLDLLDNNPLCGSE 272
              ++  DE FD+N+LL +L++N + G E
Sbjct: 232 EPLEFGVDETFDINELLGILNDNNVSGQE 260

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and abscisic acid-inducible transcription.
Arabidopsis thaliana (taxid: 3702)

>sp|A2WL19|DRE2A_ORYSI Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/139 (59%), Positives = 102/139 (73%), Gaps = 11/139 (7%)

Query: 20  RKRKRRDGVN-VAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRC 78
           R R++ DG + +AET++ W+  N+ L+    E+   R+ PAKGSKKGCM GKGGPEN  C
Sbjct: 19  RTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGPENSNC 74

Query: 79  DYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV 138
            YRGVRQRTWGKWVAEIREPNRG RLWLG+FP+A+EAA AYD AARAMYGP AR+N  D 
Sbjct: 75  AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFAD- 133

Query: 139 SRLNESSKDSDSTTSSNQS 157
                +S D++S  +S  S
Sbjct: 134 -----NSTDANSGCTSAPS 147

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q0JQF7|DRE2A_ORYSJ Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 101/136 (74%), Gaps = 11/136 (8%)

Query: 20  RKRKRRDGVN-VAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRC 78
           R R++ DG + +AET++ W+  N+ L+    E+   R+ PAKGSKKGCM GKGGPEN  C
Sbjct: 19  RTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGPENSNC 74

Query: 79  DYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV 138
            YRGVRQRTWGKWVAEIREPNRG RLWLG+FP+A+EAA AYD AARAMYGP AR+N  D 
Sbjct: 75  AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFAD- 133

Query: 139 SRLNESSKDSDSTTSS 154
                +S D++S  +S
Sbjct: 134 -----NSTDANSGCTS 144

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SIZ0|DRE2H_ARATH Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3

 Score =  164 bits (415), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 4/121 (3%)

Query: 20  RKRKRRDGVNVAETLERWRRYNESLESGN----GEDKPMRRVPAKGSKKGCMKGKGGPEN 75
           RKRK R   +VAE L +WR YNE  E+ +    G  KP+R+ P K S+KGCMKGKGGPEN
Sbjct: 3   RKRKSRGTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKAPPKRSRKGCMKGKGGPEN 62

Query: 76  GRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNL 135
           G CDY GVRQRTWGKWVAEIREP RG +LWLGTF S+ EAALAYD A++A+YG  ARLNL
Sbjct: 63  GICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNL 122

Query: 136 P 136
           P
Sbjct: 123 P 123

Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O82132|DRE2A_ARATH Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 180/328 (54%), Gaps = 57/328 (17%)

Query: 16  LSSDRKRKRR---DGVNVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGG 72
           + + RKRK R   DG  VAE L+RW+ YNE++E  + +    R+VPAKGSKKGCMKGKGG
Sbjct: 15  IDTSRKRKSRSRGDGTTVAERLKRWKEYNETVEEVSTK---KRKVPAKGSKKGCMKGKGG 71

Query: 73  PENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCAR 132
           PEN RC +RGVRQR WGKWVAEIREPNRG+RLWLGTFP+A EAA AYD AA+AMYGP AR
Sbjct: 72  PENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLAR 131

Query: 133 LNLPDVSRLNESSKDSDSTTSSNQSEIEDAK------VKNDAREAESKIIA--------- 177
           LN P        S  S+ T++S+QSE+   +      VK +  + ESK  +         
Sbjct: 132 LNFP-------RSDASEVTSTSSQSEVCTVETPGCVHVKTEDPDCESKPFSGGVEPMYCL 184

Query: 178 QPEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDA 237
           +  AE +   VK   K    + E  YW + L  K + +++ I+   C        +++D+
Sbjct: 185 ENGAEEMKRGVKAD-KHWLSEFEHNYWSDILKEKEKQKEQGIV-ETCQ------QQQQDS 236

Query: 238 TGIDWLEGYDWSKD---------EMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSL- 287
             +     Y W  D         +MFDV++LL  L+ + +     Q      ++  GS  
Sbjct: 237 LSV---ADYGWPNDVDQSHLDSSDMFDVDELLRDLNGDDVFAGLNQDRYPGNSVANGSYR 293

Query: 288 -DQSQFGYEKPLD------PFFQLRNPD 308
            +  Q G++ PL       P FQL   D
Sbjct: 294 PESQQSGFD-PLQSLNYGIPPFQLEGKD 320

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

Arabidopsis thaliana (taxid: 3702)

>sp|O82133|DRE2B_ARATH Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=2 SV=1

 Score =  139 bits (349), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 111/164 (67%), Gaps = 5/164 (3%)

Query: 20  RKRKRRDGVNVAETLERWRRYNESLESGNGED--KPMRRVPAKGSKKGCMKGKGGPENGR 77
           + R R  G+ VA+ L++W+ YNE +E+   ++  KP R+VPAKGSKKGCMKGKGGP+N  
Sbjct: 16  KSRARAGGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGGPDNSH 75

Query: 78  CDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPD 137
           C +RGVRQR WGKWVAEIREP  G RLWLGTFP+A +AA AYD AA AMYG  ARLN P 
Sbjct: 76  CSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQ 135

Query: 138 V--SRLNESSKDSDSTTSSNQSEI-EDAKVKNDAREAESKIIAQ 178
              S    +S  S+  T  N++ +  D  VK++  + ES   +Q
Sbjct: 136 SVGSEFTSTSSQSEVCTVENKAVVCGDVCVKHEDTDCESNPFSQ 179

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84ZA1|DRE2C_ORYSJ Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonica GN=DREB2C PE=2 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 70/83 (84%)

Query: 52  KPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPS 111
           K  +  P + S+KGCMKGKGGPEN RC +RGVRQRTWGKWVAEIREPNRG RLWLGTF +
Sbjct: 27  KSRKCCPLRRSRKGCMKGKGGPENQRCPFRGVRQRTWGKWVAEIREPNRGARLWLGTFNT 86

Query: 112 AVEAALAYDHAARAMYGPCARLN 134
           A++AA AYD AARA+YG CARLN
Sbjct: 87  ALDAARAYDSAARALYGDCARLN 109

Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LQZ2|DRE2D_ARATH Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 81/110 (73%), Gaps = 4/110 (3%)

Query: 49  GEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGT 108
           G +K  R V A  S+KGCM+GKGGP+N  C Y+GVRQRTWGKWVAEIREPNRG RLWLGT
Sbjct: 12  GANKKQRTVQAS-SRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGT 70

Query: 109 FPSAVEAALAYDHAARAMYGPCARLNLPDVSRL---NESSKDSDSTTSSN 155
           F ++ EAALAYD AAR +YGP A LNLP+  R      SS  S +T SSN
Sbjct: 71  FDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSN 120

Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription.

Arabidopsis thaliana (taxid: 3702)

>sp|P61827|DRE2G_ARATH Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 69/86 (80%)

Query: 50  EDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTF 109
           E  P ++     S+KGCMKGKGGPEN  C +RGVRQRTWGKWVAEIREPNRG RLWLGTF
Sbjct: 4   EQPPAKKRNMGRSRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTF 63

Query: 110 PSAVEAALAYDHAARAMYGPCARLNL 135
            ++VEAA+AYD AA+ +YG  A+LNL
Sbjct: 64  NTSVEAAMAYDEAAKKLYGHEAKLNL 89

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O80917|DRE2E_ARATH Dehydration-responsive element-binding protein 2E OS=Arabidopsis thaliana GN=DREB2E PE=2 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 88/151 (58%), Gaps = 19/151 (12%)

Query: 30  VAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWG 89
           V  TL+RW    E L          RRV AKGSKKGCM+GKGGPEN  C +RGVRQR WG
Sbjct: 29  VEATLQRWE--EEGLAR-------ARRVQAKGSKKGCMRGKGGPENPVCRFRGVRQRVWG 79

Query: 90  KWVAEIREP--------NRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRL 141
           KWVAEIREP        +R  RLWLGTF +A EAALAYD AA  MYGP ARLN P+   L
Sbjct: 80  KWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYARLNFPE--DL 137

Query: 142 NESSKDSDSTTSSNQSEIEDAKVKNDAREAE 172
               K  +   SS    +E  K  N   E E
Sbjct: 138 GGGRKKDEEAESSGGYWLETNKAGNGVIETE 168

Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid-inducible transcription.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
255559549	386	Dehydration-responsive element-binding p	0.893	0.784	0.432	3e-60
8346773	376	AP2-domain DNA-binding protein [Catharan	0.941	0.848	0.451	8e-50
297827667	350	hypothetical protein ARALYDRAFT_903325 [	0.855	0.828	0.389	7e-49
338784256	319	dehydration responsive element binding p	0.761	0.808	0.437	2e-48
300079002	341	ethylene response factor 3 [Actinidia de	0.837	0.832	0.446	2e-48
407907362	393	DRE-binding protein 2A;2 [Glycine max]	0.870	0.750	0.434	3e-48
359806162	382	dehydration-responsive element-binding p	0.858	0.761	0.440	5e-48
407317211	407	ethylene-responsive element binding fact	0.873	0.727	0.417	9e-48
350535124	300	dehydration responsive element binding p	0.699	0.79	0.419	5e-47
401021912	199	putative dehydration responsive element-	0.407	0.693	0.652	1e-46

>gi|255559549|ref|XP_002520794.1| Dehydration-responsive element-binding protein 2C, putative [Ricinus communis] gi|223539925|gb|EEF41503.1| Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/370 (43%), Positives = 210/370 (56%), Gaps = 67/370 (18%)

Query: 14  MPLSSDRKRKRRDGVN-VAETLERWRRYNESLES-GNGED-KPMRRVPAKGSKKGCMKGK 70
           M L S RKRKRR+G + VAETL++W+ YNE L+S   GED KP+R+ PAKGS+KGCMKGK
Sbjct: 13  MQLDSTRKRKRREGTSSVAETLKKWKEYNEYLDSCAKGEDNKPVRKTPAKGSRKGCMKGK 72

Query: 71  GGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPC 130
           GGPEN  C+YRGVRQRTWGKWVAEIREPNRG RLWLGTFP+A EAA+AYD AA+AMYG  
Sbjct: 73  GGPENSECNYRGVRQRTWGKWVAEIREPNRGPRLWLGTFPTAYEAAVAYDEAAKAMYGSS 132

Query: 131 ARLNLPDVSRLNESSKD--------------------SDSTTSSNQSEI---EDAK---V 164
           ARLN P++S    SSKD                    SDSTT+SN SE+   +D K   V
Sbjct: 133 ARLNFPELS---SSSKDDTHSVATTSGGYPSVAAPAGSDSTTTSNHSEVCVLDDTKEHVV 189

Query: 165 KNDAREAESKII--AQPEAELLSSPV--KPKAKDEAEDNEKYYWGEQLDCKPEARDEPIL 220
           K    E ESKI   + P  +  S+    K + K E E+ ++   GE        ++ PI 
Sbjct: 190 KLGDGEGESKITPHSDPLTQTASATTTYKQELKSELENVKESDRGEV-----PVKEVPIQ 244

Query: 221 GSICDVKPETGDERKDATGIDWLEGYDW-----------------SKDEMFDVNDLLDLL 263
            + CD+K +  D+ +       L   +W                 + DE+F+V++LL ++
Sbjct: 245 NNACDLKQKGADDLQPVPKDFSLNVEEWNLLNENEGQGQDIWQNFTMDELFNVDELLGVI 304

Query: 264 DNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGAS 323
           DN PL       ++ +   Q    D +Q  +++PLD  FQL +PD     G   +E   S
Sbjct: 305 DNYPL-------DMQFDGGQLLCTDNNQLQHDQPLDLSFQLESPDTRFIGGYQPSEQVPS 357

Query: 324 --DYGLQFLK 331
             DY   F+K
Sbjct: 358 GGDYSFDFVK 367

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8346773|emb|CAB93939.1| AP2-domain DNA-binding protein [Catharanthus roseus]

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 167/370 (45%), Positives = 216/370 (58%), Gaps = 51/370 (13%)

Query: 4   QSKDSSPSLMMPLSSDRKRK--RRDGV-NVAETLERWRRYNESLESGNGEDKPMRRVPAK 60
           Q+ + SP   MP    RKRK  RRDG  NVAETL +W+ YNE L++ +G  KP R+VPAK
Sbjct: 6   QASNLSP---MPFDFTRKRKSRRRDGTKNVAETLAKWKEYNEKLDALDG-GKPARKVPAK 61

Query: 61  GSKKGCMKGKGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYD 120
           GSKKGCMKGKGGPEN  C YRGVRQRTWGKWVAEIREPNRG+RLWLGTF +A+EAALAYD
Sbjct: 62  GSKKGCMKGKGGPENSHCKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFRNAIEAALAYD 121

Query: 121 HAARAMYGPCARLNLPDVSRLNESS-----KDSDSTTSSNQSEI---EDAK-------VK 165
            AARAMYGPCARLNLP+     ESS       SD+TT+S  SE+   ED K       +K
Sbjct: 122 EAARAMYGPCARLNLPNYRASEESSSLPTTSGSDTTTASGISEVSVYEDKKFTPVVSGLK 181

Query: 166 NDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEAR---DEPILGS 222
            D +  ES   A  + +LL     P +  + E  E     + +D + E +   +EP    
Sbjct: 182 QDDK-GESLESADSKPQLLVDAGTPMSAVKEEPKEY----QVMDSQSEGQFGDEEPPSKL 236

Query: 223 ICD---------VKP--ETGDERKDATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGS 271
           +C          V P  +  +E     G D L+G   S  EMFDV++LL +LD+ PL  S
Sbjct: 237 VCKEVDFGQDQAVVPAVKNAEEMGGEMGGDILKGCSLS--EMFDVDELLSVLDSTPLHAS 294

Query: 272 EQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHGAS-DYGLQFL 330
           + Q  +   N++A    ++ + Y    D  FQL+N D +L    + A+     + GL FL
Sbjct: 295 DFQHGMGNGNVKA----EAAYNYAPSWDSAFQLQNQDPKLGSQQHMAQTPPEINSGLDFL 350

Query: 331 ---KEEESDF 337
              ++E+S F
Sbjct: 351 QPGRQEDSYF 360

Source: Catharanthus roseus

Species: Catharanthus roseus

Genus: Catharanthus

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827667|ref|XP_002881716.1| hypothetical protein ARALYDRAFT_903325 [Arabidopsis lyrata subsp. lyrata] gi|297327555|gb|EFH57975.1| hypothetical protein ARALYDRAFT_903325 [Arabidopsis lyrata subsp. lyrata]

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/336 (38%), Positives = 182/336 (54%), Gaps = 46/336 (13%)

Query: 14  MPLSSDRKRKRRDGVNVAETLERWRRYNESLESGN----GEDKPMRRVPAKGSKKGCMKG 69
           MP  S RKRK R   +VAE L +WR YNE  E+ +    G  KP+R  P KGS+KGCMKG
Sbjct: 13  MPFDSPRKRKSRGTRDVAEILRQWREYNEQTEADSCIDGGVPKPVRNPPPKGSRKGCMKG 72

Query: 70  KGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGP 129
           KGGPENG CDYRGVRQRTWGKWVAEIREP RG RLWLGTF S+ EAALAYD AA+A+YG 
Sbjct: 73  KGGPENGICDYRGVRQRTWGKWVAEIREPGRGARLWLGTFSSSYEAALAYDEAAKAIYGQ 132

Query: 130 CARLNLPDVSRLNESSKDSDS---TTSSNQSEI---EDAKVKN-----DAREAESKIIAQ 178
            ARLNLP+++  + S+  + S   T  S++SE+   ED   ++        +   + +  
Sbjct: 133 SARLNLPEITNRSSSTAATVSGSVTAFSDESEVCAREDTNERSGFGQVKLEDCNDEYVLL 192

Query: 179 PEAELLSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDAT 238
             ++ +   +K K +   E N    +G   D K E  D  ++G+        G+E+    
Sbjct: 193 DSSQCIKEELKVKEEVMEEHNSAVGFGIGQDPKREILDAWLMGN--------GNEQ---- 240

Query: 239 GIDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPL 298
                E  ++  DE FD+N+LL +LD+N + G E         +Q     Q  F Y+   
Sbjct: 241 -----EPLEFGVDETFDINELLGILDDNNVSGQE--------TMQNQVDRQPNFSYQT-- 285

Query: 299 DPFFQLRNPDMELPVGVNYAEHGASDYGLQFLKEEE 334
               Q ++ ++   +      H   DYG  +++  E
Sbjct: 286 ----QFQDANLLGSLNPMEIAHPGVDYGYPYVQPSE 317

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|338784256|gb|AEI98833.1| dehydration responsive element binding protein 1 [Solanum tuberosum]

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/290 (43%), Positives = 164/290 (56%), Gaps = 32/290 (11%)

Query: 29  NVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTW 88
           NV E L +W+ YNE L+S + E KP+ +VPAKGSKKGCM+GKGGPEN RC YRGVRQR W
Sbjct: 32  NVEERLAKWKEYNEKLDSVDDEGKPVCKVPAKGSKKGCMRGKGGPENSRCKYRGVRQRIW 91

Query: 89  GKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLNESSKDS 148
           GKWVAEIREP RG+RLWLGTF +A+EAALAYD AARAMYGPCARLNLP+    ++S  DS
Sbjct: 92  GKWVAEIREPKRGSRLWLGTFGTAIEAALAYDEAARAMYGPCARLNLPNYPSRDDSDSDS 151

Query: 149 DSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWGEQL 208
            S  +++ S   D  V +       +         LSS VK + KDE             
Sbjct: 152 ASWATTSAS---DCTVASGGEVCPGEGATTAAGTPLSS-VKNEGKDETAG---------- 197

Query: 209 DCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVNDLLDLLDNNPL 268
                     + G +  V+P + D+    +G D L+  +   DEMFDV+DLL +LD+ P+
Sbjct: 198 ----------LPGEMEIVEPTSIDQDTLKSGWDCLDNLNL--DEMFDVDDLLAMLDSTPV 245

Query: 269 CGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYA 318
             ++  S+   Y      L  S      P  P    +    E P+  +YA
Sbjct: 246 STNDFGSDGKQYAYDNNLLSNS------PCQPLGDPQEMGQEAPMTFDYA 289

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300079002|gb|ADJ67432.1| ethylene response factor 3 [Actinidia deliciosa]

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 189/345 (54%), Gaps = 61/345 (17%)

Query: 14  MPLSSDRKRK---RRDGVN-VAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKG 69
           +PL   RKRK   RRDG N + ETL +W+ YNE LES +   KP+RR PAKGSKKGCMKG
Sbjct: 23  VPLDYSRKRKARNRRDGPNGIVETLAKWKEYNEKLESLDNSPKPVRRAPAKGSKKGCMKG 82

Query: 70  KGGPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGP 129
           KGGP+N  C+YRGVRQRTWGKWVAEIREPNRG+RLWLGTFP+A+EAA AYD AA+AMYGP
Sbjct: 83  KGGPQNSNCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTALEAARAYDEAAKAMYGP 142

Query: 130 CARLNLPDVSRLNESSKDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVK 189
            ARLN  + S   ESS             +E A +   +    S   +  E +L +    
Sbjct: 143 SARLNFANGSSFTESS-------------VESASLPTTSGSGSSTSSSYSEVKLHA---- 185

Query: 190 PKAKDEAEDNEKYYWGE---------QLDCKPEARDEPILGSICDVKPETGDERKDATG- 239
           PKAK E  D+E    G              K E  DEP       V+     E+ +  G 
Sbjct: 186 PKAKHEDGDDESRIGGNSPLASNNMPMTAVKEEVNDEP-------VEFNGKGEQMELIGK 238

Query: 240 --IDWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKP 297
             +D++   D+S DE FDV +LL +LD                     S D+  F  EKP
Sbjct: 239 PSLDYIL-EDFSLDETFDVEELLGILDE-----------------MGQSSDRINFQGEKP 280

Query: 298 LDPFFQLRNPDMELPVGVNYAEHG--ASDYGLQFLKE-EESDFGF 339
            D  +QL+NPD +L   +N+ E      DYGL FLK   E DF F
Sbjct: 281 SDLSYQLQNPDAKLLGSLNHMEQAPPVVDYGLDFLKPGREEDFNF 325

Source: Actinidia deliciosa

Species: Actinidia deliciosa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|407907362|gb|AFU35563.1| DRE-binding protein 2A;2 [Glycine max]

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 190/345 (55%), Gaps = 50/345 (14%)

Query: 29  NVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTW 88
           +VAET+ +W+ YNE L SG  + +   + PAKGSKKGCMKGKGGP+N +C+YRGVRQRTW
Sbjct: 29  SVAETIAKWKEYNEHLYSGKDDSRTTPKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTW 88

Query: 89  GKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP---DVSRLNESS 145
           GKWV EIREPNRG+RLWLGTF SA EAALAYD AARAMYGPCARLN P   D +   ES 
Sbjct: 89  GKWVGEIREPNRGSRLWLGTFSSAQEAALAYDEAARAMYGPCARLNFPGITDYASFKESL 148

Query: 146 KDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWG 205
           K+S    SS+ S  E A         +S++ A  + +   +P      D+  D  K Y  
Sbjct: 149 KESPMAASSSCSSAETATSDTTTTSNQSEVCAAEDVK--ENPRLVNVNDKVNDCHKAYEA 206

Query: 206 EQLDC--KPEARDE------PILGSICDVKPE--------TGDERKDATGIDWLEGYD-- 247
                  K E +DE      P  G I DV+PE          D  KD   + W++G+D  
Sbjct: 207 ASPTSRMKQEPKDEAVDHMVPGAGKILDVRPEGTHDAGQVAEDVNKDQMDLPWIDGFDFS 266

Query: 248 ------WSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDP- 300
                 +S DE+F V++LL L+DNNP+  S              SLD  Q G+    +P 
Sbjct: 267 DNYLNRFSTDELFQVDELLGLIDNNPIDESALMQ----------SLDFGQMGFPGDGNPQ 316

Query: 301 --------FFQLRNPDMELPVGVNYAEHGAS--DYGLQFLKEEES 335
                    +QL+NPD +L   + + E   S  DYGL FLK  ES
Sbjct: 317 VDDTLSSFIYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFLKTVES 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806162|ref|NP_001240942.1| dehydration-responsive element-binding protein 2C-like [Glycine max] gi|212717200|gb|ACJ37441.1| AP2 domain-containing transcription factor 7 [Glycine max]

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 149/338 (44%), Positives = 193/338 (57%), Gaps = 47/338 (13%)

Query: 29  NVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTW 88
           +VAET+ +W+ YNE L SG  + +  R+ PAKGSKKGCMKGKGGP+N +C+YRGVRQRTW
Sbjct: 29  SVAETIAKWKEYNEHLYSGKDDSRTTRKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTW 88

Query: 89  GKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP---DVSRLNESS 145
           GKWV EIREPNRG+RLWLGTF SA EAALAYD AARAMYGPCARLN P   D +   ES 
Sbjct: 89  GKWVGEIREPNRGSRLWLGTFSSAQEAALAYDEAARAMYGPCARLNFPGITDYASFKESL 148

Query: 146 KDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEKYYWG 205
           K+S    SS+ S  E A         +S++ A  + +   +P      D+  D  K Y  
Sbjct: 149 KESPMAASSSCSSAETATSDTTTTSNQSEVCAAEDVK--ENPRLVNVNDKVNDCHKAYEA 206

Query: 206 EQLDC--KPEARDE------PILGSICDVKPE--------TGDERKDATGIDWLEGYD-- 247
                  K E +DE      P  G I DV+PE          D  KD   + W++G+D  
Sbjct: 207 ASPTSRMKQEPKDEAVDHMVPGAGKILDVRPEGTHDAGQVAEDVNKDQMDLPWIDGFDFS 266

Query: 248 ------WSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGS--LDQSQFGYEKPLD 299
                 +S DE+F V++LL L+DNNP+     +S L    +Q G+  +D +   +     
Sbjct: 267 DNYLNRFSTDELFQVDELLGLIDNNPI----DESAL----MQNGNPQVDDTLSSF----- 313

Query: 300 PFFQLRNPDMELPVGVNYAEHGAS--DYGLQFLKEEES 335
             +QL+NPD +L   + + E   S  DYGL FLK  ES
Sbjct: 314 -IYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFLKTVES 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|407317211|gb|AFU07643.1| ethylene-responsive element binding factor 6 [Arachis hypogaea]

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/350 (41%), Positives = 195/350 (55%), Gaps = 54/350 (15%)

Query: 30  VAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTWG 89
           VAETL++W++YNE+L+SG  E KP ++ PAKGSKKGCMKGKGGP+N +C+YRGVRQRTWG
Sbjct: 34  VAETLQKWKKYNENLQSGKEEGKPTQKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWG 93

Query: 90  KWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP---DVSRLNESSK 146
           KWV EIREPNRG+RLWLGTF +A EAALAYD  ARAMYG  ARLN P   D S +  S K
Sbjct: 94  KWVGEIREPNRGSRLWLGTFSTAEEAALAYDETARAMYGSSARLNFPHITDYSSIKGSMK 153

Query: 147 D-------------------SDSTTSSNQSEI---EDAKVKNDAREAESKIIAQPEA-EL 183
           D                   SD+TT SN SE+   ED K +    +    ++A  +A + 
Sbjct: 154 DSSTATTTSCSSSSAATPAASDTTTVSNHSEVCAFEDVKEQVQVGKVNGTVVACHKAYDS 213

Query: 184 LSSPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWL 243
           ++SP     ++  E+ E       ++ +   RDE   G +       GD  KD   + W+
Sbjct: 214 VASPTSKVKQELLEEPEVLTDPGGVEIQNLPRDE---GQVA-----MGDVNKDQMDLSWI 265

Query: 244 EGYD---------WSKDEMFDVNDLLDLLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGY 294
           + +D         +S DE+F V++LL  +D NP+  S     L +  +  G LD SQ  +
Sbjct: 266 DNFDFEGGDYLKNFSVDELFQVDELLGDIDKNPIEDSSLMQALDFGQMDKG-LDFSQMNF 324

Query: 295 --------EKPLDPFFQLRNPDMELPVGVNYAEHGAS--DYGLQFLKEEE 334
                   + P    +QL NPD +    + + E   S  DYGL FLK EE
Sbjct: 325 PDDSSHQADIPSSYLYQLENPDAKFLGSLPHMEQIPSDADYGLDFLKSEE 374

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535124|ref|NP_001234689.1| dehydration responsive element binding protein [Solanum lycopersicum] gi|25992100|gb|AAN77051.1| dehydration responsive element binding protein [Solanum lycopersicum]

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 166/310 (53%), Gaps = 73/310 (23%)

Query: 29  NVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTW 88
           NV ETL +W+ YNE L++  G+ KP+R+VPAKGSKKGCM+GKGGPEN RC YRGVRQR W
Sbjct: 32  NVEETLAKWKEYNEKLDN-EGKGKPVRKVPAKGSKKGCMRGKGGPENWRCKYRGVRQRIW 90

Query: 89  GKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVS-------RL 141
           GKWVAEIREP RG+RLWLGTF +A+EAALAYD AARAMYGPCARLNLP+ +         
Sbjct: 91  GKWVAEIREPKRGSRLWLGTFGTAIEAALAYDDAARAMYGPCARLNLPNYACDSVSWATT 150

Query: 142 NESSKDSDSTTSSNQSEIEDAKVKNDAREAESKIIAQPEAELLSSPVKPKAKDEAEDNEK 201
           + S+  SD T +S   E+    V     EA++          LSS      KDE      
Sbjct: 151 SASASASDCTVASGFGEV--CPVDGALHEADTP---------LSS-----VKDE------ 188

Query: 202 YYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEGYDWSKDEMFDVNDLLD 261
              G  +D                V+P + DE    +G D L+  +   DEMFDV++LL 
Sbjct: 189 ---GTAMDI---------------VEPTSIDEDTLKSGWDCLDKLN--MDEMFDVDELLA 228

Query: 262 LLDNNPLCGSEQQSELSYYNLQAGSLDQSQFGYEKPLDPFFQLRNPDMELPVGVNYAEHG 321
           +LD+ P+   +  S+  + N+ + S  Q       P+                       
Sbjct: 229 MLDSTPVFTKDYNSDGKHNNMVSDSQCQEPNAVVDPM----------------------- 265

Query: 322 ASDYGLQFLK 331
             DYG  FLK
Sbjct: 266 TVDYGFDFLK 275

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|401021912|gb|AFP89590.1| putative dehydration responsive element-binding protein [Sophora davidii]

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/138 (65%), Positives = 110/138 (79%)

Query: 29  NVAETLERWRRYNESLESGNGEDKPMRRVPAKGSKKGCMKGKGGPENGRCDYRGVRQRTW 88
           ++A+ L +W+ YN  L+S N  DKP+R+VPAKGS+KGCMKGKGGPEN RC+YRGVRQRTW
Sbjct: 14  SLAKILAKWKEYNAQLDSSNDADKPIRKVPAKGSRKGCMKGKGGPENSRCNYRGVRQRTW 73

Query: 89  GKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRLNESSKDS 148
           GKWVAEIREPNRGNRLWLGTFP+A+ AALAYD AARAMYG CARLN P++S  + S + S
Sbjct: 74  GKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGTCARLNFPNISVSSFSEESS 133

Query: 149 DSTTSSNQSEIEDAKVKN 166
             +  +NQS   +  + N
Sbjct: 134 KDSLGANQSGSSETVLAN 151

Source: Sophora davidii

Species: Sophora davidii

Genus: Sophora

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2153504	335	DREB2A "AT5G05410" [Arabidopsi	0.817	0.826	0.356	2.4e-35
TAIR|locus:2063073	341	DREB2C [Arabidopsis thaliana (	0.640	0.636	0.394	4.1e-33
TAIR|locus:2085527	330	DREB2B "DRE/CRT-binding protei	0.342	0.351	0.541	7.9e-33
TAIR|locus:2063088	157	AT2G40350 [Arabidopsis thalian	0.345	0.745	0.578	2.3e-32
UNIPROTKB|Q0JQF7	274	DREB2A "Dehydration-responsive	0.342	0.423	0.553	2.6e-31
UNIPROTKB|Q5W6R4	373	DREB2B "Dehydration-responsive	0.339	0.308	0.577	1.4e-30
UNIPROTKB|Q84ZA1	230	DREB2C "Dehydration-responsive	0.185	0.273	0.809	1.2e-24
TAIR|locus:2005704	206	AT1G75490 [Arabidopsis thalian	0.268	0.441	0.597	6.8e-24
TAIR|locus:2146248	307	AT5G18450 [Arabidopsis thalian	0.185	0.205	0.746	1.3e-22
TAIR|locus:2057217	244	DREB19 "dehydration response e	0.318	0.442	0.496	4.3e-22

TAIR|locus:2153504 DREB2A "AT5G05410" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 112/314 (35%), Positives = 148/314 (47%)

Query:    20 RKRKRR---DGVNVAETLERWRRYNESLESGNGEDKPMRRVPAXXXXXXXXXXXXXPENG 76
             RKRK R   DG  VAE L+RW+ YNE++E  + +    R+VPA             PEN 
Sbjct:    19 RKRKSRSRGDGTTVAERLKRWKEYNETVEEVSTKK---RKVPAKGSKKGCMKGKGGPENS 75

Query:    77 RCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
             RC +RGVRQR WGKWVAEIREPNRG+RLWLGTFP+A EAA AYD AA+AMYGP ARLN P
Sbjct:    76 RCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135

Query:   137 --DVSRLXXXXXXXXXXXXXXXXXIEDAKVKNDAREAESKIIA---QPE------AELLS 185
               D S +                 +    VK +  + ESK  +   +P       AE + 
Sbjct:   136 RSDASEVTSTSSQSEVCTVETPGCVH---VKTEDPDCESKPFSGGVEPMYCLENGAEEMK 192

Query:   186 SPVKPKAKDEAEDNEKYYWGEQLDCKPEARDEPILGSICDVKPETGDERKDATGIDWLEG 245
               VK   K    + E  YW + L  K + +++ I+ + C  + +   +        W   
Sbjct:   193 RGVKAD-KHWLSEFEHNYWSDILKEKEKQKEQGIVET-CQQQQQ---DSLSVADYGWPND 247

Query:   246 YDWS---KDEMFDVXXXXXXXXXXPLCGSEQQSELSYYNLQAGSL--DQSQFGYEKPLD- 299
              D S     +MFDV           +     Q      ++  GS   +  Q G++ PL  
Sbjct:   248 VDQSHLDSSDMFDVDELLRDLNGDDVFAGLNQDRYPGNSVANGSYRPESQQSGFD-PLQS 306

Query:   300 -----PFFQLRNPD 308
                  P FQL   D
Sbjct:   307 LNYGIPPFQLEGKD 320

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009414 "response to water deprivation" evidence=IMP;TAS

GO:0010224 "response to UV-B" evidence=IEP;IGI

GO:0010286 "heat acclimation" evidence=IEP;RCA

GO:0009408 "response to heat" evidence=IMP

GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0006457 "protein folding" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2063073 DREB2C [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 93/236 (39%), Positives = 125/236 (52%)

Query:    20 RKRKRRDGVNVAETLERWRRYNESLESGN----GEDKPMRRVPAXXXXXXXXXXXXXPEN 75
             RKRK R   +VAE L +WR YNE +E+ +    G  K +R+ P              PEN
Sbjct:     8 RKRKSRGTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKPPPKGSRKGCMKGKGGPEN 67

Query:    76 GRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNL 135
             G CDYRGVRQR WGKWVAEIREP+ G RLWLGTF S+ EAALAYD AA+A+YG  ARLNL
Sbjct:    68 GICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNL 127

Query:   136 PDVSRLXXXXXXXXXXXXXXXXXIEDAKV--KNDAREAES----KII-AQPEAELLSSP- 187
             P+++                    ++++V  + D   +      K+     E  LL S  
Sbjct:   128 PEITNRSSSTAATATVSGSVTAFSDESEVCAREDTNASSGFGQVKLEDCSDEYVLLDSSQ 187

Query:   188 -VKPKAKDEAEDNEKYY----WGEQLDCKPEARDEPILGSICDVKP-ETG-DERKD 236
              +K + K + E  E++     +G   D K E  D  ++G+  + +P E G DE  D
Sbjct:   188 CIKEELKGKEEVREEHNLAVGFGIGQDSKRETLDAWLMGNGNEQEPLEFGVDETFD 243

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

TAIR|locus:2085527 DREB2B "DRE/CRT-binding protein 2B" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
 Identities = 65/120 (54%), Positives = 78/120 (65%)

Query:    20 RKRKRRDGVNVAETLERWRRYNESLESG---NGEDKPMRRVPAXXXXXXXXXXXXXPENG 76
             + R R  G+ VA+ L++W+ YNE +E+     GE KP R+VPA             P+N 
Sbjct:    16 KSRARAGGLTVADRLKKWKEYNEIVEASAVKEGE-KPKRKVPAKGSKKGCMKGKGGPDNS 74

Query:    77 RCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
              C +RGVRQR WGKWVAEIREP  G RLWLGTFP+A +AA AYD AA AMYG  ARLN P
Sbjct:    75 HCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFP 134

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009414 "response to water deprivation" evidence=TAS

GO:0010286 "heat acclimation" evidence=IEP

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2063088 AT2G40350 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 70/121 (57%), Positives = 81/121 (66%)

Query:    20 RKRKRRDGVNVAETLERWRRYNESLESGN----GEDKPMRRVPAXXXXXXXXXXXXXPEN 75
             RKRK R   +VAE L +WR YNE  E+ +    G  KP+R+ P              PEN
Sbjct:     3 RKRKSRGTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKAPPKRSRKGCMKGKGGPEN 62

Query:    76 GRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNL 135
             G CDY GVRQRTWGKWVAEIREP RG +LWLGTF S+ EAALAYD A++A+YG  ARLNL
Sbjct:    63 GICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNL 122

Query:   136 P 136
             P
Sbjct:   123 P 123

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

UNIPROTKB|Q0JQF7 DREB2A "Dehydration-responsive element-binding protein 2A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 67/121 (55%), Positives = 82/121 (67%)

Query:    20 RKRKRRDGVN-VAETLERWRRYNESLESGNGEDKPMRRVPAXXXXXXXXXXXXXPENGRC 78
             R R++ DG + +AET++ W+  N+ L+    E+   R+ PA             PEN  C
Sbjct:    19 RTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGPENSNC 74

Query:    79 DYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV 138
              YRGVRQRTWGKWVAEIREPNRG RLWLG+FP+A+EAA AYD AARAMYGP AR+N  D 
Sbjct:    75 AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFADN 134

Query:   139 S 139
             S
Sbjct:   135 S 135

GO:0005634 "nucleus" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

UNIPROTKB|Q5W6R4 DREB2B "Dehydration-responsive element-binding protein 2B" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 67/116 (57%), Positives = 76/116 (65%)

Query:    20 RKRKRRDG-VNVAETLERWRRYNESLESGNGEDKPMRRVPAXXXXXXXXXXXXXPENGRC 78
             R R+ RDG  +VAET++RW   N   E      K  R+ PA             PEN RC
Sbjct:    28 RPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMKGKGGPENTRC 87

Query:    79 DYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLN 134
             D+RGVRQRTWGKWVAEIREPN+ +RLWLGTFP+A  AA AYD AARAMYGP AR N
Sbjct:    88 DFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYGPMARTN 143

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

UNIPROTKB|Q84ZA1 DREB2C "Dehydration-responsive element-binding protein 2C" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query:    73 PENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCAR 132
             PEN RC +RGVRQRTWGKWVAEIREPNRG RLWLGTF +A++AA AYD AARA+YG CAR
Sbjct:    48 PENQRCPFRGVRQRTWGKWVAEIREPNRGARLWLGTFNTALDAARAYDSAARALYGDCAR 107

Query:   133 LNL 135
             LNL
Sbjct:   108 LNL 110

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2005704 AT1G75490 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 55/92 (59%), Positives = 62/92 (67%)

Query:    49 GEDKPMRRVPAXXXXXXXXXXXXXPENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGT 108
             G +K  R V A             P+N  C Y+GVRQRTWGKWVAEIREPNRG RLWLGT
Sbjct:    12 GANKKQRTVQASSRKGCMRGKGG-PDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGT 70

Query:   109 FPSAVEAALAYDHAARAMYGPCARLNLPDVSR 140
             F ++ EAALAYD AAR +YGP A LNLP+  R
Sbjct:    71 FDTSREAALAYDSAARKLYGPEAHLNLPESLR 102

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2146248 AT5G18450 [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 47/63 (74%), Positives = 54/63 (85%)

Query:    73 PENGRCDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCAR 132
             PEN  C +RGVRQRTWGKWVAEIREPNRG RLWLGTF ++VEAA+AYD AA+ +YG  A+
Sbjct:    27 PENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAK 86

Query:   133 LNL 135
             LNL
Sbjct:    87 LNL 89

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2057217 DREB19 "dehydration response element-binding protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 62/125 (49%), Positives = 69/125 (55%)

Query:    21 KRKRRDGVNVAETLERWRRYNESLESGNGEDKPMRRVPAXXXXXXXXXXXXXPENGRCDY 80
             +R+RR    V  TL+RW    E L          RRV A             PEN  C +
Sbjct:    20 RRRRRVVEPVEATLQRWEE--EGLARA-------RRVQAKGSKKGCMRGKGGPENPVCRF 70

Query:    81 RGVRQRTWGKWVAEIREP--------NRGNRLWLGTFPSAVEAALAYDHAARAMYGPCAR 132
             RGVRQR WGKWVAEIREP        +R  RLWLGTF +A EAALAYD AA  MYGP AR
Sbjct:    71 RGVRQRVWGKWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYAR 130

Query:   133 LNLPD 137
             LN P+
Sbjct:   131 LNFPE 135

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IMP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_402826.1 annotation not avaliable (350 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
smart00380	64	smart00380, AP2, DNA-binding domain in plant prote	8e-29
cd00018	61	cd00018, AP2, DNA-binding domain found in transcri	8e-28
pfam00847	53	pfam00847, AP2, AP2 domain	7e-11

>gnl|CDD|197689 smart00380, AP2, DNA-binding domain in plant proteins such as APETALA2 and EREBPs

 Score =  105 bits (264), Expect = 8e-29
 Identities = 39/57 (68%), Positives = 44/57 (77%)

Query: 80  YRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
           YRGVRQR WGKWVAEIR+P++G R+WLGTF +A EAA AYD AA    G  ARLN P
Sbjct: 2   YRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFP 58

Length = 64

>gnl|CDD|237985 cd00018, AP2, DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

 Score =  102 bits (257), Expect = 8e-28
 Identities = 39/61 (63%), Positives = 44/61 (72%)

Query: 78  CDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPD 137
             YRGVRQR WGKWVAEIR+P+ G R+WLGTF +A EAA AYD AA  + G  A LN PD
Sbjct: 1   SKYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPD 60

Query: 138 V 138
            
Sbjct: 61  S 61

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Length = 61

>gnl|CDD|216148 pfam00847, AP2, AP2 domain

 Score = 56.5 bits (137), Expect = 7e-11
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 80  YRGVRQR-TWGKWVAEIREPN--RGNRLWLGTFPSAVEAALAYDHAARAMYG 128
           Y+GVR    WG+WVAEIR+P   +  R  LGTF +  EAA A   A   + G
Sbjct: 3   YKGVRYDKRWGRWVAEIRDPGEKKKKRFSLGTFGTE-EAARAAIAARLKLRG 53

This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
cd00018	61	AP2 DNA-binding domain found in transcription regu	99.83
smart00380	64	AP2 DNA-binding domain in plant proteins such as A	99.82
PHA00280	121	putative NHN endonuclease	99.43
PF00847	56	AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-	99.03

>cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

Probab=99.83  E-value=1.1e-20  Score=141.66  Aligned_cols=61  Identities=64%  Similarity=1.121  Sum_probs=57.8

Q ss_pred             CCceeEEECCCCcEEEEEeecCCCcEeeccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 019546           78 CDYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV  138 (339)
Q Consensus        78 S~YRGVr~r~~GKW~A~Ir~~~~gkrv~LGtFdT~EEAArAYD~AA~k~~G~~A~~NFP~~  138 (339)
                      |+|+||+++++|||+|+|+++..++++|||+|+|+||||+|||.|+++++|..+.+|||++
T Consensus         1 s~~~GV~~~~~gkw~A~I~~~~~gk~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~   61 (61)
T cd00018           1 SKYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPDS   61 (61)
T ss_pred             CCccCEEECCCCcEEEEEEeCCCCceEccCCCCCHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence            6899999888999999999866699999999999999999999999999999999999975

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies.

>smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Probab=99.82  E-value=2.7e-20  Score=141.21  Aligned_cols=63  Identities=62%  Similarity=1.063  Sum_probs=60.2

Q ss_pred             CceeEEECCCCcEEEEEeecCCCcEeeccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCccC
Q 019546           79 DYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDVSRL  141 (339)
Q Consensus        79 ~YRGVr~r~~GKW~A~Ir~~~~gkrv~LGtFdT~EEAArAYD~AA~k~~G~~A~~NFP~~~~~  141 (339)
                      +|+||+++++|||+|+|+++.+++++|||+|+|+||||+|||.|+++++|..+.+|||.+.|.
T Consensus         1 ~~kGV~~~~~gkw~A~I~~~~~~k~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~~y~   63 (64)
T smart00380        1 KYRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSLYD   63 (64)
T ss_pred             CEeeEEeCCCCeEEEEEEecCCCcEEecCCCCCHHHHHHHHHHHHHHhcCCccccCCCCccCC
Confidence            599999888999999999988999999999999999999999999999999999999998874

>PHA00280 putative NHN endonuclease

Probab=99.43  E-value=2.8e-13  Score=116.10  Aligned_cols=68  Identities=16%  Similarity=0.224  Sum_probs=60.8

Q ss_pred             cccccCCCCCCCCCCCCceeEEEC-CCCcEEEEEeecCCCcEeeccCCCCHHHHHHHHHHHHHHhcCCCCCC
Q 019546           63 KKGCMKGKGGPENGRCDYRGVRQR-TWGKWVAEIREPNRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARL  133 (339)
Q Consensus        63 ~~~~~r~~~g~~~~~S~YRGVr~r-~~GKW~A~Ir~~~~gkrv~LGtFdT~EEAArAYD~AA~k~~G~~A~~  133 (339)
                      ....++|++..++++|+|+||.++ ..|||+|+|+.  +||+++||.|+|+|+|+.||+ ++.+++|++|+.
T Consensus        52 ~~eN~~N~~~~~~N~SG~kGV~~~k~~~kw~A~I~~--~gK~~~lG~f~~~e~A~~a~~-~~~~lhGeFa~~  120 (121)
T PHA00280         52 PKENSWNMKTPKSNTSGLKGLSWSKEREMWRGTVTA--EGKQHNFRSRDLLEVVAWIYR-TRRELHGQFARF  120 (121)
T ss_pred             HHHHhcccCCCCCCCCCCCeeEEecCCCeEEEEEEE--CCEEEEcCCCCCHHHHHHHHH-HHHHHhhccccC
Confidence            456788988999999999999765 57999999997  999999999999999999997 788999999864

>PF00847 AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-related genes transcriptional activator binds to the GCC-box pathogenesis-related promoter element and activates the plant's defence genes

Probab=99.03  E-value=4.7e-10  Score=82.06  Aligned_cols=52  Identities=31%  Similarity=0.435  Sum_probs=45.0

Q ss_pred             CCceeEEEC-CCCcEEEEEeecCC---CcEeeccCCCCHHHHHHHHHHHHHHhcCC
Q 019546           78 CDYRGVRQR-TWGKWVAEIREPNR---GNRLWLGTFPSAVEAALAYDHAARAMYGP  129 (339)
Q Consensus        78 S~YRGVr~r-~~GKW~A~Ir~~~~---gkrv~LGtFdT~EEAArAYD~AA~k~~G~  129 (339)
                      |+|+||++. ..++|+|+|++...   +++++||.|++++||++||+.+++.++|+
T Consensus         1 s~~~GV~~~~~~~~W~a~i~~~~~~g~~k~f~~g~fg~~~eA~~~a~~~r~~~~~e   56 (56)
T PF00847_consen    1 SGYKGVSWDKRRGRWRAQIRVWSENGKRKRFSVGKFGFEEEAKRAAIEARKELEGE   56 (56)
T ss_dssp             SSSTTEEEETTTTEEEEEEEECCCTTEEEEEEECCCCCHHHHHHHHHHHHHHCTS-
T ss_pred             CCcEEEEEcCCCCEEEEEEEEcccCcccEEEeCccCCCHHHHHHHHHHHHHHhcCC
Confidence            689999766 47999999998421   49999999999999999999999999874

Ethylene, chemically the simplest plant hormone, participates in a number of stress responses and developmental processes: e.g., fruit ripening, inhibition of stem and root elongation, promotion of seed germination and flowering, senescence of leaves and flowers, and sex determination []. DNA sequence elements that confer ethylene responsiveness have been shown to contain two 11bp GCC boxes, which are necessary and sufficient for transcriptional control by ethylene. Ethylene responsive element binding proteins (EREBPs) have now been identified in a variety of plants. The proteins share a similar domain of around 59 amino acids, which interacts directly with the GCC box in the ERE.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3IGM_A 3GCC_A 1GCC_A 2GCC_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
2gcc_A	70	Solution Structure Of The Gcc-Box Binding Domain, N		1e-12
1gcc_A	63	Solution Nmr Structure Of The Complex Of Gcc-Box Bi		1e-12

>pdb|2GCC|A Chain A, Solution Structure Of The Gcc-Box Binding Domain, Nmr, Minimized Mean Structure Length = 70

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 80  YRGVRQRTWGKWVAEIREPNR-GNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
           YRGVRQR WGK+ AEIR+P + G R+WLGTF +A +AALAYD AA  M G  A LN P
Sbjct: 6   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 63

>pdb|1GCC|A Chain A, Solution Nmr Structure Of The Complex Of Gcc-Box Binding Domain Of Aterf1 And Gcc-Box Dna, Minimized Average Structure Length = 63

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 80  YRGVRQRTWGKWVAEIREPNR-GNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
           YRGVRQR WGK+ AEIR+P + G R+WLGTF +A +AALAYD AA  M G  A LN P
Sbjct: 3   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
1gcc_A	63	Ethylene responsive element binding factor 1; tran	1e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A Length = 63

 Score =  112 bits (282), Expect = 1e-31
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)

Query: 80  YRGVRQRTWGKWVAEIREPNR-GNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
           YRGVRQR WGK+ AEIR+P + G R+WLGTF +A +AALAYD AA  M G  A LN P
Sbjct: 3   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 68/427 (15%), Positives = 130/427 (30%), Gaps = 110/427 (25%)

Query: 2   AIQSKDSSPSLMMPL-SSDRKRKRRDGVNVAE-TLERWRRYNESLESGNGEDKPMRRVPA 59
            I+++   PS+M  +    R R   D    A+  + R + Y + L     E +P + V  
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK-LRQALLELRPAKNVLI 155

Query: 60  KGSKKGCMKGKGGPENGRCDYRGVRQRTWGK--W--VAEIREPN----RGNRLWLGTFPS 111
            G   G   GK       C    V+ +   K  W  +     P        +L     P+
Sbjct: 156 DG-VLGS--GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 112 AVEAALAYDHAARAMYG-----------------PCARLNLPDVSRLNESSKDSDS---- 150
               +   DH++                          L L +V     ++K  ++    
Sbjct: 213 WTSRS---DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ----NAKAWNAFNLS 265

Query: 151 -----TT--SSNQSEIEDAKVKNDAREAESKIIAQPEA-ELLSSPVKPKAKD---EA--- 196
                TT        +  A   + + +  S  +   E   LL   +  + +D   E    
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 197 -------------EDNEKY-YWGEQLDCKPEARDEPILGSICDVKPETGDERK------- 235
                        +    +  W + ++C  +     I  S+  ++P   + RK       
Sbjct: 326 NPRRLSIIAESIRDGLATWDNW-KHVNC--DKLTTIIESSLNVLEPA--EYRKMFDRLSV 380

Query: 236 --DATGI--DWLEGYDWSKDEMFDVNDLLDLLDNNPLCGSEQQSE---LSYYNLQ---AG 285
              +  I    L    W      DV  +++ L    L   E+Q +   +S  ++      
Sbjct: 381 FPPSAHIPTILLSLI-WFDVIKSDVMVVVNKLHKYSLV--EKQPKESTISIPSIYLELKV 437

Query: 286 SLDQSQFGYEKPLDPFFQLR---NPDMELPVGVNY-AEHGASDYGLQFLKEEES------ 335
            L+     +   +D +   +   + D+  P    Y   H    + L+ ++  E       
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG--HHLKNIEHPERMTLFRM 495

Query: 336 ---DFGF 339
              DF F
Sbjct: 496 VFLDFRF 502

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
1gcc_A	63	Ethylene responsive element binding factor 1; tran	99.9

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A

Probab=99.90  E-value=1.2e-24  Score=165.24  Aligned_cols=60  Identities=62%  Similarity=1.031  Sum_probs=57.2

Q ss_pred             CceeEEECCCCcEEEEEeecCC-CcEeeccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 019546           79 DYRGVRQRTWGKWVAEIREPNR-GNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV  138 (339)
Q Consensus        79 ~YRGVr~r~~GKW~A~Ir~~~~-gkrv~LGtFdT~EEAArAYD~AA~k~~G~~A~~NFP~~  138 (339)
                      +||||++++||||+|+|+++.+ |+++|||||+|+||||+|||.||++++|.+|++|||++
T Consensus         2 ~yrGV~~r~~gkw~A~I~~~~~~g~r~~LGtf~T~eeAA~AyD~Aa~~~~G~~a~~NFp~~   62 (63)
T 1gcc_A            2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcccEeeCCCCcEEEEEccccCCCeEEEeeeCCCHHHHHHHHHHHHHHhcCcccccCCCCc
Confidence            6999999999999999999864 79999999999999999999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1gcca_	63	d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cr	2e-26

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 63

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 97.8 bits (244), Expect = 2e-26
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)

Query: 80  YRGVRQRTWGKWVAEIREPNR-GNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLP 136
           YRGVRQR WGK+ AEIR+P + G R+WLGTF +A +AALAYD AA  M G  A LN P
Sbjct: 3   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1gcca_	63	GCC-box binding domain {Mouse-ear cress (Arabidops	99.9

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.8e-24  Score=162.97  Aligned_cols=60  Identities=62%  Similarity=1.024  Sum_probs=56.2

Q ss_pred             CceeEEECCCCcEEEEEeec-CCCcEeeccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 019546           79 DYRGVRQRTWGKWVAEIREP-NRGNRLWLGTFPSAVEAALAYDHAARAMYGPCARLNLPDV  138 (339)
Q Consensus        79 ~YRGVr~r~~GKW~A~Ir~~-~~gkrv~LGtFdT~EEAArAYD~AA~k~~G~~A~~NFP~~  138 (339)
                      .||||++|++|||+|+|+++ .+++++|||||+|+||||+|||.||++++|++|.+|||..
T Consensus         2 ~yrGVr~r~~gkw~A~Ir~~~~~~~r~~LGtf~t~eeAArAYD~aa~~~~G~~a~~NFP~~   62 (63)
T d1gcca_           2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcceEeECCCCCEEEEEecCCCCCcEeccccccCHHHHHHHHHHHHHHhcCCCcccCCCcc
Confidence            59999999999999999986 4668999999999999999999999999999999999974