Citrus Sinensis ID: 019551

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANLR
Secondary Structure (PSIPRED)
cccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEccccccHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEcccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEccHHHHHHHHHHHHHHHHHHHHEEEHccccccccccccccHHHHEccccccEEEEEccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccEHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccHHHHHHHHHHHHHHHHHHcccHccccEEEEEEEcccHccccccEccccccccccHHHccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mqsptlnfrvqispTQLSMFLLKKWRVAAFGVYgymnftkngfkehsknfkpedmqariegkncvvtganagigyaTAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAnrfslknkpvhVLVNNagvlennrlitsegFELNFAVNVLGTYTITESMVpllekaapdarvitvssggmytahltddlefnsgsfdgMEQYARNKRVQVALTEKWSEMYKEkgigfysmhpgwaetpgvaksmpsfnerfagnlrtseegADTVLWLALqpkeklvsgsfyfdraeapkHLKFAATAASHARIDPIVDVLRSMANLR
Flexible Loop (DISEMBL)
mqsptlnfrvqisptQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAirsktgnenvHLELCDLSSITEIKSFAnrfslknkpvHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAataasharidpIVDVLRSMANLR
Low Complexity Region (SEG)
MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANLR
Disordered region (IsUnstruct)
*******FRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFK************ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK******L*AI***TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG*********************GADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVL*******
Disordered Region (DISOPRED)
********RVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP************ARIDPIVDVLRSMANLR
Disordered Region (DISEMBL)
MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANLR
Disordered Region (DISPRO)
**SPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMAN**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
A6QP05	317	Dehydrogenase/reductase S	yes	no	0.870	0.930	0.455	2e-69
A0PJE2	317	Dehydrogenase/reductase S	yes	no	0.855	0.914	0.441	3e-66
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.713	0.761	0.356	8e-32
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.710	0.762	0.351	1e-30
Q9QYF1	316	Retinol dehydrogenase 11	no	no	0.716	0.768	0.346	1e-30
P59837	316	Retinol dehydrogenase 12	no	no	0.707	0.759	0.366	9e-30
Q96NR8	316	Retinol dehydrogenase 12	no	no	0.725	0.778	0.362	1e-29
Q8CEE7	334	Retinol dehydrogenase 13	no	no	0.743	0.754	0.340	5e-29
Q8NBN7	331	Retinol dehydrogenase 13	no	no	0.749	0.767	0.334	2e-28
Q8N5I4	330	Dehydrogenase/reductase S	no	no	0.710	0.730	0.339	1e-25

>sp|A6QP05|DHR12_BOVIN Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1

 Score =  263 bits (672), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 189/301 (62%), Gaps = 6/301 (1%)

Query: 25  WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
           +R AA+   G   +TK+G++  SK+F P+D++ ++ G+  +VTG N+GIG ATA  +A R
Sbjct: 4   YRSAAWFAKGLREYTKSGYESASKDFVPDDLEVQVPGRAFMVTGGNSGIGKATAMEIAKR 63

Query: 85  GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
           G TV++VCR   + E A + I  ++GN+N+ L + DLS    +  F   F  ++  ++VL
Sbjct: 64  GGTVHLVCRDHSRAEGAKAEIIRESGNQNIFLHIVDLSLPKSVWKFVENFKQEHT-LNVL 122

Query: 145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
           +NNAG + N R +T +G E NFA N LG Y +T +++P+LEK   D RVITVSSGGM   
Sbjct: 123 INNAGCMVNKRELTEDGLEKNFATNTLGVYVLTTALIPVLEKEH-DPRVITVSSGGMLVQ 181

Query: 205 HL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
            L TDD +    +FDG   YA+NKR QV LTE+W+  +    I F  MHPGW +TPGV  
Sbjct: 182 KLNTDDPQSERTAFDGTMVYAQNKRQQVVLTERWARAH--PAIHFSCMHPGWVDTPGVRL 239

Query: 264 SMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL-VSGSFYFDRAEAPKHLKFAATAASH 322
           SMP F+ R    LR+  +GADTVLWLAL P      SG F+ DR  AP HL  A T++S 
Sbjct: 240 SMPGFHARLGARLRSEAQGADTVLWLALAPAATAQPSGCFFQDRKPAPTHLPLARTSSSP 299

Query: 323 A 323
           A
Sbjct: 300 A 300

Putative oxidoreductase.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|A0PJE2|DHR12_HUMAN Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=1 SV=2

 Score =  252 bits (644), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/306 (44%), Positives = 186/306 (60%), Gaps = 16/306 (5%)

Query: 25  WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
           +R   +   G   +TK+G++   K+F P D++ +I G+  +VTG N+GIG ATA  +A R
Sbjct: 4   YRSVVWFAKGLREYTKSGYESACKDFVPHDLEVQIPGRVFLVTGGNSGIGKATALEIAKR 63

Query: 85  GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
           G TV++VCR +   E A   I  ++GN+N+ L + DLS   +I  F   F  ++K +HVL
Sbjct: 64  GGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEHK-LHVL 122

Query: 145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
           +NNAG + N R +T +G E NFA N LG Y +T  ++P+LEK   D RVITVSSGGM   
Sbjct: 123 INNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEH-DPRVITVSSGGMLVQ 181

Query: 205 HL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
            L T+DL+     FDG   YA+NKR QV LTE+W++ +    I F SMHPGWA+TPGV +
Sbjct: 182 KLNTNDLQSERTPFDGTMVYAQNKRQQVVLTERWAQGH--PAIHFSSMHPGWADTPGVRQ 239

Query: 264 SMPSFNERFAGNLRTSEEGADTVLW------LALQPKEKLVSGSFYFDRAEAPKHLKFAA 317
           +MP F+ RF   LR+  +GADT+LW       A QP     SG F+ DR     HL  A 
Sbjct: 240 AMPGFHARFGDRLRSEAQGADTMLWLALSSAAAAQP-----SGRFFQDRKPVSTHLPLAT 294

Query: 318 TAASHA 323
            ++S A
Sbjct: 295 ASSSPA 300

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  138 bits (347), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 144/255 (56%), Gaps = 13/255 (5%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ GK  VVTGAN GIG  TA+ LA RGA VY+ CR  EKGE     I++ TGN+ V + 
Sbjct: 38  QLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVR 97

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
             DLS    I++FA  F  + K +HVL+NNAGV+      T++GFE++  VN LG + +T
Sbjct: 98  KLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLT 157

Query: 178 ESMVPLLEKAAPDARVITVSS-----GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
             ++  L+++AP +R++ VSS     G ++  +L  +  +N+G       Y  +K   + 
Sbjct: 158 HLLLEKLKESAP-SRIVNVSSLAHHLGRIHFHNLQGEKFYNAGL-----AYCHSKLANIL 211

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFAGNLRTSEEGADTVLWLA 290
            T++ +   K  G+  YS+HPG  ++  V  S  M      F+  ++T ++GA T L  A
Sbjct: 212 FTQELARRLKGSGVTTYSVHPGTVQSELVRHSSFMRWMWWLFSFFIKTPQQGAQTSLHCA 271

Query: 291 LQPKEKLVSGSFYFD 305
           L    +++SG+ + D
Sbjct: 272 LTEGLEILSGNHFSD 286

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 15/256 (5%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +I GK  V+TGAN GIG  TA  LA RGA VY+ CR   KGE+A S IR+ T N  V + 
Sbjct: 36  QIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVR 95

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
             DLS    I++FA RF  + K +H+L+NNAGV+      T++GFE +F VN LG + +T
Sbjct: 96  KLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLT 155

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA------RNKRVQV 231
             ++  L+++AP ARV+ +SS     AHL   + F+     G ++Y        +K   +
Sbjct: 156 YLLLERLKESAP-ARVVNLSS----IAHLIGKIRFH--DLQGQKRYCSAFAYGHSKLANL 208

Query: 232 ALTEKWSEMYKEKGIGFYSMHPG--WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWL 289
             T + ++  +  G+  Y++HPG   +E    +  +      F+   +++ +GA T L  
Sbjct: 209 LFTRELAKRLQGTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPFFKSTSQGAQTSLHC 268

Query: 290 ALQPKEKLVSGSFYFD 305
           AL    + +SG ++ D
Sbjct: 269 ALAEDLEPLSGKYFSD 284

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 11/254 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ GK  +VTGAN GIG  TA+ LA RGA VY+ CR  +KGE A   I++ TGN  V + 
Sbjct: 35  QLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVR 94

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
             DL+    I++FA  F  + K +H+L+NNAGV+      T++GFE++  VN LG + +T
Sbjct: 95  KLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLT 154

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTA----HLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
             ++  L+++AP +R++ +SS G +      H     +F S        Y  +K   +  
Sbjct: 155 HLLLEKLKESAP-SRIVNLSSLGHHLGRIHFHNLQGEKFYSAGL----AYCHSKLANILF 209

Query: 234 TEKWSEMYKEKGIGFYSMHPG--WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL 291
           T++ ++  K  G+  YS+HPG   +E    +  M    + F   ++T +EGA T L+ AL
Sbjct: 210 TKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRWLWQLFFVFIKTPQEGAQTSLYCAL 269

Query: 292 QPKEKLVSGSFYFD 305
               + +SGS + D
Sbjct: 270 TEGLESLSGSHFSD 283

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  131 bits (329), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 135/251 (53%), Gaps = 11/251 (4%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  V+TGAN GIG  TA  LA RGA VY+ CR   KGE+A S I++ T N  V +   D
Sbjct: 39  GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LS    I++FA  F  + K +H+L+NNAGV+      T++GFE + AVN LG + +T  +
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLL 158

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ----YARNKRVQVALTEK 236
           +  L+++AP ARV+ +SS     AH    + F+    D        Y  +K   V  T +
Sbjct: 159 LGRLKESAP-ARVVNLSS----VAHHLGKIRFHDLQGDKYYNLGFAYCHSKLANVLFTRE 213

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFAGNLRTSEEGADTVLWLALQPK 294
            ++  K  G+  Y++HPG   +  V  S  +      F+  L+T+ EGA T L  AL   
Sbjct: 214 LAKRLKGTGVTTYAVHPGIVRSKLVRHSFLLCLLWRLFSPFLKTTWEGAQTSLHCALAEG 273

Query: 295 EKLVSGSFYFD 305
            + +SG ++ D
Sbjct: 274 LEPLSGKYFSD 284

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 135/251 (53%), Gaps = 5/251 (1%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ GK  V+TGAN GIG  TA  LASRGA VY+ CR   KGE+A S IR  T N  V + 
Sbjct: 36  QLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVR 95

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
             DLS    I++FA  F  + K +H+L+NNAGV+      T++GFE +  VN LG + +T
Sbjct: 96  KLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLT 155

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALTEK 236
             ++  L+ +AP ARV+ VSS   +   +   DL+       G   Y  +K   V  T +
Sbjct: 156 YLLLERLKVSAP-ARVVNVSSVAHHIGKIPFHDLQSEKRYSRGF-AYCHSKLANVLFTRE 213

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFAGNLRTSEEGADTVLWLALQPK 294
            ++  +  G+  Y++HPG   +  V  S  +      F+  ++T+ EGA T L  AL   
Sbjct: 214 LAKRLQGTGVTTYAVHPGVVRSELVRHSSLLCLLWRLFSPFVKTAREGAQTSLHCALAEG 273

Query: 295 EKLVSGSFYFD 305
            + +SG ++ D
Sbjct: 274 LEPLSGKYFSD 284

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1

 Score =  128 bits (322), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 15/267 (5%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
           +A I GK  +VTGAN GIG  TA  LA RG  V + CR  EK E A   IR +T N  V 
Sbjct: 33  KATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIRGETLNPRVR 92

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYT 175
            E  DL+S+  I+ FA +   + + V +LVNNA V+      T +GFE+ F VN LG + 
Sbjct: 93  AERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFL 152

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALT 234
           +T  ++  L+ +AP +R+I +SS      H+  +DL +    +D    Y ++K   V  T
Sbjct: 153 LTNLLLDKLKASAP-SRIINLSSLAHVAGHIDFEDLNWQMKKYDTKAAYCQSKLAVVLFT 211

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL---------RTSEEGADT 285
           ++ S   +  G+   ++HPG A T  + +     N  F+G +         ++ +  A  
Sbjct: 212 KELSHRLQGSGVTVNALHPGVARTE-LGRHTGMHNSAFSGFMLGPFFWLLFKSPQLAAQP 270

Query: 286 VLWLALQPKEKLVSGSFYFD--RAEAP 310
             +LA+  + + VSG  YFD  R +AP
Sbjct: 271 STYLAVAEELENVSGK-YFDGLREKAP 296

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 139/269 (51%), Gaps = 15/269 (5%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
           +A I GK  +VTGAN GIG  TA  LA RG  + + CR  EK E A   IR +T N +V+
Sbjct: 33  KATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLNHHVN 92

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYT 175
               DL+S+  I+ FA +   + + V +L+NNAGV+      T +GFE+ F VN LG + 
Sbjct: 93  ARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFEMQFGVNHLGHFL 152

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALT 234
           +T  ++  L+ +AP +R+I +SS      H+  DDL + +  ++    Y ++K   V  T
Sbjct: 153 LTNLLLDKLKASAP-SRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLFT 211

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP--------GVAKSMPSFNERFAGNLRTSEEGADTV 286
           ++ S   +  G+   ++HPG A T         G   S  +    F   +++ E  A   
Sbjct: 212 KELSRRLQGSGVTVNALHPGVARTELGRHTGIHGSTFSSTTLGPIFWLLVKSPELAAQPS 271

Query: 287 LWLALQPKEKLVSGSFYFD----RAEAPK 311
            +LA+  +   VSG  YFD    +A AP+
Sbjct: 272 TYLAVAEELADVSGK-YFDGLKQKAPAPE 299

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 15/256 (5%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTG   GIGY+TA+ LA  G  V +   +  K +  +S I+ +T N+ V    CDL+S+
Sbjct: 47  IVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASM 106

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
           T I+ F  +F +K  P+HVL+NNAGV+   +  T +GFE +F +N LG + +T  ++  L
Sbjct: 107 TSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTL 166

Query: 185 -EKAAP--DARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
            E  +P   ARV+TVSS   Y A L  DDL+ +S  +     YA++K   V  T     +
Sbjct: 167 KESGSPGHSARVVTVSSATHYVAELNMDDLQ-SSACYSPHAAYAQSKLALVLFTYHLQRL 225

Query: 241 YKEKG--IGFYSMHPGWAETPGVAKSMPSFNERFAGNL------RTSEEGADTVLWLALQ 292
              +G  +    + PG   T  V K +  +  R A  L      +T +EGA T ++ A+ 
Sbjct: 226 LAAEGSHVTANVVDPGVVNT-DVYKHV-FWATRLAKKLLGWLLFKTPDEGAWTSIYAAVT 283

Query: 293 PKEKLVSGSFYFDRAE 308
           P+ + V G + ++  E
Sbjct: 284 PELEGVGGHYLYNEKE 299

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
225470842	343	PREDICTED: dehydrogenase/reductase SDR f	0.997	0.985	0.745	1e-151
147782549	343	hypothetical protein VITISV_017613 [Viti	0.997	0.985	0.745	1e-151
118488871	341	unknown [Populus trichocarpa x Populus d	0.997	0.991	0.746	1e-150
297809153	322	short-chain dehydrogenase/reductase fami	0.943	0.993	0.771	1e-149
255566744	322	short-chain dehydrogenase, putative [Ric	0.943	0.993	0.778	1e-149
449443855	340	PREDICTED: dehydrogenase/reductase SDR f	0.997	0.994	0.724	1e-149
388521109	342	unknown [Lotus japonicus]	0.946	0.938	0.757	1e-148
449510870	340	PREDICTED: dehydrogenase/reductase SDR f	0.997	0.994	0.721	1e-148
388503624	342	unknown [Lotus japonicus]	0.946	0.938	0.757	1e-148
224085225	322	predicted protein [Populus trichocarpa]	0.943	0.993	0.771	1e-148

>gi|225470842|ref|XP_002265826.1| PREDICTED: dehydrogenase/reductase SDR family member 12 [Vitis vinifera] gi|296083139|emb|CBI22775.3| unnamed protein product [Vitis vinifera]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/338 (74%), Positives = 294/338 (86%)

Query: 1   MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIE 60
           MQ+PTL+ ++ IS  +  MF+LK WR  AFGV+GY N TK GF EHSKNFK EDMQ +IE
Sbjct: 1   MQNPTLHIQIHISIRESIMFILKTWRSIAFGVHGYKNSTKTGFMEHSKNFKSEDMQTQIE 60

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GKNC+VTGAN+GIGYATAEGLASRGA VYMVCR+KE+GE ALS I+SKTGN NVHLE+CD
Sbjct: 61  GKNCIVTGANSGIGYATAEGLASRGANVYMVCRNKERGEAALSEIQSKTGNSNVHLEVCD 120

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSS++EIKSFA++FS K+ P+HVLVNNAG+LE NR+ TSEGFELNFAVNVLGT+T+TESM
Sbjct: 121 LSSVSEIKSFASKFSKKDVPIHVLVNNAGLLEYNRITTSEGFELNFAVNVLGTFTMTESM 180

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
           +PLLEKAAPDARVITVSSGGMY+  LT+DL+F+   FDG+ QYARNKRVQVALTEKW+EM
Sbjct: 181 LPLLEKAAPDARVITVSSGGMYSVPLTNDLQFSDDKFDGVTQYARNKRVQVALTEKWAEM 240

Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSG 300
           YK KGIGFY+MHPGWAET G+AKS+P F +  +GNLRT EEGADT++WLALQPKEKLVSG
Sbjct: 241 YKNKGIGFYAMHPGWAETSGLAKSLPGFYKLLSGNLRTIEEGADTIIWLALQPKEKLVSG 300

Query: 301 SFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL 338
           +FYFDRAEAPKHL FAAT +SHA ID I+  LRS + L
Sbjct: 301 AFYFDRAEAPKHLMFAATRSSHAMIDSIIGNLRSFSGL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782549|emb|CAN61801.1| hypothetical protein VITISV_017613 [Vitis vinifera]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/338 (74%), Positives = 293/338 (86%)

Query: 1   MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIE 60
           MQ+PTL+ ++ IS  +  MF+LK WR  AFGV+GY N TK GF EHSKNFK EDMQ +IE
Sbjct: 1   MQNPTLHIQIHISIRESIMFILKTWRSIAFGVHGYXNSTKTGFMEHSKNFKSEDMQTQIE 60

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GKNC+VTGAN+GIGYATAEGLASRGA VYMVCR+KE+GE ALS I+SKTGN NVHLE+CD
Sbjct: 61  GKNCIVTGANSGIGYATAEGLASRGANVYMVCRNKERGEAALSEIQSKTGNSNVHLEVCD 120

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSS++EIKSFA++FS K+ P+HVLVNNAG+LE NR+ TSEGFELNFAVNVLGT+T+TESM
Sbjct: 121 LSSVSEIKSFASKFSKKDVPIHVLVNNAGLLEYNRITTSEGFELNFAVNVLGTFTMTESM 180

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
           +PLLEKAAPDARVITVSSGGMY+  LT+DL+F+   FDG+ QYARNKRVQVALTEKW+EM
Sbjct: 181 LPLLEKAAPDARVITVSSGGMYSVPLTNDLQFSDDKFDGVTQYARNKRVQVALTEKWAEM 240

Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSG 300
           YK KGIGFY+MHPGWAET G+AKS+P F +  +GNLRT EEGADT +WLALQPKEKLVSG
Sbjct: 241 YKNKGIGFYAMHPGWAETSGLAKSLPGFYKLLSGNLRTIEEGADTXIWLALQPKEKLVSG 300

Query: 301 SFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL 338
           +FYFDRAEAPKHL FAAT +SHA ID I+  LRS + L
Sbjct: 301 AFYFDRAEAPKHLMFAATRSSHAMIDSIIGNLRSFSGL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488871|gb|ABK96245.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 253/339 (74%), Positives = 290/339 (85%), Gaps = 1/339 (0%)

Query: 1   MQSPTLNFRVQI-SPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARI 59
           M + TL+F + + S   LSMFLLK WR  AFGVYGY+NFTK+ F EHSK F PED QARI
Sbjct: 1   MVTATLHFEIHVHSVRSLSMFLLKTWRATAFGVYGYLNFTKSAFMEHSKKFNPEDTQARI 60

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GKNCVVTGAN+GIGYATAEGLASRGATVYMVCRSKE+GE ALS I+S TGN+ VHLE+C
Sbjct: 61  DGKNCVVTGANSGIGYATAEGLASRGATVYMVCRSKERGEAALSQIQSTTGNQKVHLEVC 120

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITES 179
           DLSS+++IKSFA+RFS KN PVHVLVNNAG LEN ++ TSEGFE NFAVNVLGTY++TE 
Sbjct: 121 DLSSVSDIKSFASRFSSKNVPVHVLVNNAGFLENEQMTTSEGFEQNFAVNVLGTYSMTEL 180

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
           M+PLLE AAPDARVITVSSGGMYTA LT DL+F+ G F+G+EQYARNKRVQVALTE W+E
Sbjct: 181 MMPLLENAAPDARVITVSSGGMYTAPLTTDLQFSKGKFNGVEQYARNKRVQVALTENWAE 240

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVS 299
           MYK+KGI FYSMHPGWA TPGVA S+P FN+  +G LRTSEEGADTV+WLALQPKEKL  
Sbjct: 241 MYKDKGISFYSMHPGWAATPGVANSLPDFNKSLSGKLRTSEEGADTVIWLALQPKEKLTP 300

Query: 300 GSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL 338
           G+FYFDRAEAPKHL F+AT  SH+ I+ IV+ LRSM+ L
Sbjct: 301 GAFYFDRAEAPKHLMFSATRGSHSLINNIVEDLRSMSRL 339

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297809153|ref|XP_002872460.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318297|gb|EFH48719.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 247/320 (77%), Positives = 283/320 (88%)

Query: 19  MFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATA 78
           MFLLK WR  AFGVYGYMNFTKNGF EHSK FKPEDMQ +IEGKNCVVTGAN+GIGYA A
Sbjct: 1   MFLLKTWRSTAFGVYGYMNFTKNGFIEHSKKFKPEDMQLQIEGKNCVVTGANSGIGYAAA 60

Query: 79  EGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN 138
           EGLASRGATVYMVCR+KE+G+ ALS I++ TGN+NV+LE+CDLSS+ EIKSFA+ F+ K+
Sbjct: 61  EGLASRGATVYMVCRNKERGQEALSKIQTSTGNQNVYLEVCDLSSVNEIKSFASSFASKD 120

Query: 139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            PVHVLVNNAG+LEN R  T EGFELNFAVNVLGTYT+TE M+PLLEKA PDA+VITV+S
Sbjct: 121 VPVHVLVNNAGLLENKRTTTPEGFELNFAVNVLGTYTMTELMLPLLEKATPDAKVITVAS 180

Query: 199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
           GGMYT+ LT DL+F+   FDG+EQYARNKR+QVALTEKW++ YKEKGIG+YSMHPGWAET
Sbjct: 181 GGMYTSPLTTDLQFSGEKFDGVEQYARNKRIQVALTEKWADKYKEKGIGYYSMHPGWAET 240

Query: 259 PGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAAT 318
           PGVAKS+PSF+E FAG LRTSE+GADT++WLALQPKEKLVSGSFYFDRAEAPKHLK A T
Sbjct: 241 PGVAKSLPSFSESFAGKLRTSEQGADTIVWLALQPKEKLVSGSFYFDRAEAPKHLKLAGT 300

Query: 319 AASHARIDPIVDVLRSMANL 338
           + SH  ID ++D + SMA L
Sbjct: 301 SKSHDLIDSVIDTVHSMAAL 320

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566744|ref|XP_002524356.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223536447|gb|EEF38096.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/320 (77%), Positives = 282/320 (88%)

Query: 19  MFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATA 78
           MFLLK WR  AFGVYGY+NFTK+GF EHSK+FKPEDMQ  +EGKNC+VTGAN+GIGYATA
Sbjct: 1   MFLLKTWRKTAFGVYGYLNFTKSGFMEHSKSFKPEDMQISLEGKNCIVTGANSGIGYATA 60

Query: 79  EGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN 138
           EGLASRGATVYMVCR+KE+GE ALS I+S TGN+NVHLE+CDLSS++EI SFA++ +LK 
Sbjct: 61  EGLASRGATVYMVCRNKERGEAALSNIQSTTGNQNVHLEVCDLSSVSEINSFASKLALKQ 120

Query: 139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            PVHVLVNNAG+LE+ R+ TSEGFELNFAVNVLGTY +TE MVPLLEKAAPDARVITVSS
Sbjct: 121 VPVHVLVNNAGLLEDKRVTTSEGFELNFAVNVLGTYAMTELMVPLLEKAAPDARVITVSS 180

Query: 199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
           GGMYTA LT DL+FN G F G+EQYARNKRVQVALTEKW+EM+K+KGI FYSMHPGWAET
Sbjct: 181 GGMYTAPLTTDLQFNDGKFSGLEQYARNKRVQVALTEKWAEMHKDKGISFYSMHPGWAET 240

Query: 259 PGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAAT 318
           PG+AKSMPSF+   +G LRTSEEGADTVLWLALQPKEKL SG+FYFDRA APKHL  AAT
Sbjct: 241 PGIAKSMPSFSNSLSGKLRTSEEGADTVLWLALQPKEKLESGAFYFDRAVAPKHLMSAAT 300

Query: 319 AASHARIDPIVDVLRSMANL 338
           ++SH  ID I+  L S+A L
Sbjct: 301 SSSHTVIDSIISNLHSIATL 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443855|ref|XP_004139691.1| PREDICTED: dehydrogenase/reductase SDR family member 12-like [Cucumis sativus]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 245/338 (72%), Positives = 290/338 (85%)

Query: 1   MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIE 60
           M++ TL  R+ IS   L+MFLLK WRV+AFGVYGY+NFTK+ F EHSK FKPEDMQ  IE
Sbjct: 1   MEAATLQLRIHISIGTLAMFLLKAWRVSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIE 60

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GKNC+VTGAN+GIGYATAEGLASRGA+VYM+CR+KE+GE ALS I+SKTGN+NVHLE+CD
Sbjct: 61  GKNCIVTGANSGIGYATAEGLASRGASVYMICRNKERGEAALSEIKSKTGNQNVHLEVCD 120

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSSI++IKSF+++F  KN PVHVLVNNAG+LE NR+ T EGFE NFAVNVLGTY +TES+
Sbjct: 121 LSSISDIKSFSSKFISKNVPVHVLVNNAGMLEKNRITTPEGFEFNFAVNVLGTYAMTESL 180

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
           +PLLEKAAPDA+VITVSSGGMY+  LT+DL+F+   FDG+ QYARNKRVQVALTEKWSEM
Sbjct: 181 LPLLEKAAPDAKVITVSSGGMYSVPLTNDLQFSEDEFDGVVQYARNKRVQVALTEKWSEM 240

Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSG 300
           Y +KGIGFYSMHPGWAETPG  KS+PSF++  +G LRTSEEGADT++WLALQPKEKL  G
Sbjct: 241 YSKKGIGFYSMHPGWAETPGATKSLPSFSKSLSGKLRTSEEGADTIIWLALQPKEKLEPG 300

Query: 301 SFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL 338
           +F+FDR  APKHL FAAT +SH  +  I D LRS++ L
Sbjct: 301 AFFFDRMVAPKHLAFAATKSSHTAMGSIYDHLRSLSGL 338

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521109|gb|AFK48616.1| unknown [Lotus japonicus]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 243/321 (75%), Positives = 287/321 (89%)

Query: 17  LSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYA 76
           L+MFLLK WR  AFGVYGY+NFTK GF EHSK FKPE+M+ +I G+NC+VTGAN+GIGYA
Sbjct: 19  LAMFLLKTWRQTAFGVYGYLNFTKPGFLEHSKKFKPEEMETQIPGRNCIVTGANSGIGYA 78

Query: 77  TAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL 136
           TAEGLA RGATVY+VCR+KE+GE ALS I++KTGN NVHLE+CDLSS+TEIKSFA+RFS 
Sbjct: 79  TAEGLAQRGATVYLVCRNKERGEAALSEIQTKTGNRNVHLEICDLSSVTEIKSFASRFSE 138

Query: 137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITV 196
           KN P+HVLVNNAG++E NR+ T+EGFELNFAVNVLGTYT+TE MVPLLEKA+PDARVITV
Sbjct: 139 KNLPLHVLVNNAGLIEQNRVTTTEGFELNFAVNVLGTYTMTELMVPLLEKASPDARVITV 198

Query: 197 SSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA 256
           SSGGMYT+ LT DL+++  +++G+EQYARNKRVQVALTEKW+E Y+ KG+GFYSMHPGW 
Sbjct: 199 SSGGMYTSPLTKDLQYSESNYNGVEQYARNKRVQVALTEKWAETYENKGVGFYSMHPGWV 258

Query: 257 ETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFA 316
           ETPGVAKS+PSF++  +G LRTSEEGADTV+WLALQPKEKLVSG+FYFDRAEAPKHL FA
Sbjct: 259 ETPGVAKSLPSFSKSLSGKLRTSEEGADTVIWLALQPKEKLVSGAFYFDRAEAPKHLAFA 318

Query: 317 ATAASHARIDPIVDVLRSMAN 337
           AT+ SHA I+ +VD L SM +
Sbjct: 319 ATSGSHALINSVVDSLHSMVS 339

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449510870|ref|XP_004163792.1| PREDICTED: dehydrogenase/reductase SDR family member 12-like [Cucumis sativus]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/338 (72%), Positives = 289/338 (85%)

Query: 1   MQSPTLNFRVQISPTQLSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIE 60
           M++ TL  R+ IS   L+MFLLK WRV+AFGVYGY+NFTK+ F EHSK FKPEDMQ  IE
Sbjct: 1   MEAATLQLRIHISIGTLAMFLLKAWRVSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIE 60

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GKNC+VTGAN+GIGYATAEGLASRGA+VYM+CR+KE+GE ALS I+SKTGN+NVHLE+CD
Sbjct: 61  GKNCIVTGANSGIGYATAEGLASRGASVYMICRNKERGEAALSEIKSKTGNQNVHLEVCD 120

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSSI++IKSF+++F  KN PVHVLVNNAG+LE NR+ T EGFE NFAVNVLGTY +TES+
Sbjct: 121 LSSISDIKSFSSKFISKNVPVHVLVNNAGMLEKNRITTPEGFEFNFAVNVLGTYAMTESL 180

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
           +PLLEKAAPDA+VITVSSGGMY+  LT+DL+F+   FDG+ QYARNKRVQVALTEKWSE 
Sbjct: 181 LPLLEKAAPDAKVITVSSGGMYSVPLTNDLQFSEDEFDGVVQYARNKRVQVALTEKWSET 240

Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSG 300
           Y +KGIGFYSMHPGWAETPG  KS+PSF++  +G LRTSEEGADT++WLALQPKEKL  G
Sbjct: 241 YSKKGIGFYSMHPGWAETPGATKSLPSFSKSLSGKLRTSEEGADTIIWLALQPKEKLEPG 300

Query: 301 SFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL 338
           +F+FDR  APKHL FAAT +SH  +  I D LRS++ L
Sbjct: 301 AFFFDRMVAPKHLAFAATKSSHTAMGSIYDHLRSLSGL 338

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503624|gb|AFK39878.1| unknown [Lotus japonicus]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 243/321 (75%), Positives = 286/321 (89%)

Query: 17  LSMFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYA 76
           L+MFLLK WR  AFGVYGY+NFTK GF EHSK FKPE+M+ +I G+NC+VTGAN+GIGYA
Sbjct: 19  LAMFLLKTWRQTAFGVYGYLNFTKPGFLEHSKKFKPEEMETQIPGRNCIVTGANSGIGYA 78

Query: 77  TAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL 136
           TAEGLA RGATVY+VCR+KE+GE ALS I++KTGN NVHLE+CDLSS TEIKSFA+RFS 
Sbjct: 79  TAEGLAQRGATVYLVCRNKERGEAALSEIQTKTGNRNVHLEICDLSSATEIKSFASRFSE 138

Query: 137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITV 196
           KN P+HVLVNNAG++E NR+ T+EGFELNFAVNVLGTYT+TE MVPLLEKA+PDARVITV
Sbjct: 139 KNLPLHVLVNNAGLIEQNRVTTTEGFELNFAVNVLGTYTMTELMVPLLEKASPDARVITV 198

Query: 197 SSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA 256
           SSGGMYT+ LT DL+++  +++G+EQYARNKRVQVALTEKW+E Y+ KG+GFYSMHPGWA
Sbjct: 199 SSGGMYTSPLTKDLQYSESNYNGVEQYARNKRVQVALTEKWAETYENKGVGFYSMHPGWA 258

Query: 257 ETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFA 316
           ETPGVAKS+PSF++  +G LR SEEGADTV+WLALQPKEKLVSG+FYFDRAEAPKHL FA
Sbjct: 259 ETPGVAKSLPSFSKSLSGKLRASEEGADTVIWLALQPKEKLVSGAFYFDRAEAPKHLAFA 318

Query: 317 ATAASHARIDPIVDVLRSMAN 337
           AT+ SHA I+ +VD L SM +
Sbjct: 319 ATSGSHALINSVVDSLHSMVS 339

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085225|ref|XP_002307520.1| predicted protein [Populus trichocarpa] gi|222856969|gb|EEE94516.1| predicted protein [Populus trichocarpa]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 247/320 (77%), Positives = 281/320 (87%)

Query: 19  MFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATA 78
           MFLLK WR  AFGVYGY+NFTK+ F EHSK F PED QARI+GKNCVVTGAN+GIGYATA
Sbjct: 1   MFLLKTWRATAFGVYGYLNFTKSAFMEHSKKFNPEDTQARIDGKNCVVTGANSGIGYATA 60

Query: 79  EGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN 138
           EGLASRGATVYMVCRSKE+GE ALS I+S TGN+ VHLE+CDLSS+++IKSFA+RFS KN
Sbjct: 61  EGLASRGATVYMVCRSKERGEAALSQIQSTTGNQKVHLEVCDLSSLSDIKSFASRFSSKN 120

Query: 139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            PVHVLVNNAG LEN ++ TSEGFE NFAVNVLGTY++TE ++PLLE AAPDARVITVSS
Sbjct: 121 VPVHVLVNNAGFLENEQITTSEGFEQNFAVNVLGTYSMTELILPLLENAAPDARVITVSS 180

Query: 199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
           GGMYTA LT DL+F+ G F+G+EQYARNKRVQVALTE W+EMYK+KGI FYSMHPGWAET
Sbjct: 181 GGMYTAPLTTDLQFSKGKFNGVEQYARNKRVQVALTENWAEMYKDKGISFYSMHPGWAET 240

Query: 259 PGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAAT 318
           PGVAKS+P FN+  +G LRTSEEGADTV+WLALQPKEKL  G+FYFDRAEAPKHL F+AT
Sbjct: 241 PGVAKSLPDFNKSLSGKLRTSEEGADTVIWLALQPKEKLTPGAFYFDRAEAPKHLMFSAT 300

Query: 319 AASHARIDPIVDVLRSMANL 338
             SH+ I+ IV+ LRSM+ L
Sbjct: 301 RGSHSLINNIVEDLRSMSRL 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2118435	322	AT4G09750 [Arabidopsis thalian	0.943	0.993	0.756	7.9e-133
UNIPROTKB|E1BUZ3	323	DHRS12 "Uncharacterized protei	0.908	0.953	0.452	5.5e-70
UNIPROTKB|A6QP05	317	DHRS12 "Dehydrogenase/reductas	0.908	0.971	0.442	8.2e-67
ZFIN|ZDB-GENE-060929-1134	318	dhrs12 "dehydrogenase/reductas	0.911	0.971	0.434	1.3e-66
UNIPROTKB|A0PJE2	317	DHRS12 "Dehydrogenase/reductas	0.908	0.971	0.436	2.5e-65
ZFIN|ZDB-GENE-030131-8104	320	flj13639 "flj13639" [Danio rer	0.911	0.965	0.414	2.7e-61
DICTYBASE|DDB_G0288429	330	DDB_G0288429 "short-chain dehy	0.884	0.909	0.378	9.2e-52
FB|FBgn0050495	327	CG30495 [Drosophila melanogast	0.811	0.840	0.356	5.3e-40
ZFIN|ZDB-GENE-040801-48	291	rdh12l "retinol dehydrogenase	0.722	0.841	0.361	1e-36
FB|FBgn0050491	331	CG30491 [Drosophila melanogast	0.713	0.731	0.352	1.1e-34

TAIR|locus:2118435 AT4G09750 [Arabidopsis thaliana (taxid:3702)]

 Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
 Identities = 242/320 (75%), Positives = 282/320 (88%)

Query:    19 MFLLKKWRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATA 78
             MFLLK WR  AFGVYGYMNFTK+GF +HSK FKPEDMQ +IEGKNCVVTGAN+GIG+A A
Sbjct:     1 MFLLKTWRSTAFGVYGYMNFTKSGFLDHSKKFKPEDMQLQIEGKNCVVTGANSGIGFAAA 60

Query:    79 EGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN 138
             EGLASRGATVYMVCR+KE+G+ ALS I++ TGN+NV+LE+CDLSS+ EIKSFA+ F+ K+
Sbjct:    61 EGLASRGATVYMVCRNKERGQEALSKIQTSTGNQNVYLEVCDLSSVNEIKSFASSFASKD 120

Query:   139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
              PVHVLVNNAG+LEN R  T EGFEL+FAVNVLGTYT+TE M+PLLEKA PDA+VITV+S
Sbjct:   121 VPVHVLVNNAGLLENKRTTTPEGFELSFAVNVLGTYTMTELMLPLLEKATPDAKVITVAS 180

Query:   199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
             GGMYT+ LT DL+F+   FDG+EQYARNKR+QVALTEKW++ YK KGIGFYSMHPGWAET
Sbjct:   181 GGMYTSPLTTDLQFSGEKFDGVEQYARNKRIQVALTEKWADKYKNKGIGFYSMHPGWAET 240

Query:   259 PGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAAT 318
             PGVAKS+PSF+E FAG LRTSE+GADT++WLALQPKEKLVSG+FYFDRAEAPKHLK A T
Sbjct:   241 PGVAKSLPSFSESFAGKLRTSEQGADTIVWLALQPKEKLVSGAFYFDRAEAPKHLKLAGT 300

Query:   319 AASHARIDPIVDVLRSMANL 338
             + SH  ID ++D + SMA L
Sbjct:   301 SKSHDLIDSVIDSVHSMAAL 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|E1BUZ3 DHRS12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 142/314 (45%), Positives = 209/314 (66%)

Query:    25 WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
             +R   + V G   +T++G++  SK+F P D++  + G++ ++TG+N+GIG A A+ +A R
Sbjct:     4 YRNVVWFVKGLREYTRSGYESASKHFDPADLEVDVAGRSFLITGSNSGIGKAAAKEIARR 63

Query:    85 GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
             G TV++VCR+KE+ E A   I ++TGN+N+ L + D+S+  EI  FA +F  ++K ++VL
Sbjct:    64 GGTVHLVCRNKERAEDAKGEIVTETGNQNIFLHVVDISNPKEIWKFAEKFKNEHK-LNVL 122

Query:   145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
             +NNAG + NNR +T +G E NFA N LGTY +T +++PLLEK A DARV+TVSSGGM   
Sbjct:   123 INNAGCMVNNRELTEDGLEKNFATNTLGTYVLTTALLPLLEKEA-DARVVTVSSGGMLVQ 181

Query:   205 HLT-DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
              L   DL+  S +FDG   YA+NKR QV LTE+W++ ++   I F  MHPGWA+TP V  
Sbjct:   182 KLNISDLQSGSETFDGTMVYAQNKRQQVVLTEQWAKTHRS--IHFSVMHPGWADTPAVRS 239

Query:   264 SMPSFNERFAGNLRTSEEGADTVLWLALQPKE-KLVSGSFYFDRAEAPKHLKFAATAASH 322
             SMP F ++   +LRT  +GADTV+WLA+  +  KL SG F+ DR   PKHL  A T +  
Sbjct:   240 SMPDFYQKMKNSLRTEAQGADTVVWLAVSSEAAKLPSGLFFQDRQSVPKHLPLARTHSPP 299

Query:   323 ARIDPIVDVLRSMA 336
                + +++VL   +
Sbjct:   300 GDEEKLMEVLEEFS 313

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|A6QP05 DHRS12 "Dehydrogenase/reductase SDR family member 12" [Bos taurus (taxid:9913)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 139/314 (44%), Positives = 197/314 (62%)

Query:    25 WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
             +R AA+   G   +TK+G++  SK+F P+D++ ++ G+  +VTG N+GIG ATA  +A R
Sbjct:     4 YRSAAWFAKGLREYTKSGYESASKDFVPDDLEVQVPGRAFMVTGGNSGIGKATAMEIAKR 63

Query:    85 GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
             G TV++VCR   + E A + I  ++GN+N+ L + DLS    +  F   F  ++  ++VL
Sbjct:    64 GGTVHLVCRDHSRAEGAKAEIIRESGNQNIFLHIVDLSLPKSVWKFVENFKQEHT-LNVL 122

Query:   145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
             +NNAG + N R +T +G E NFA N LG Y +T +++P+LEK   D RVITVSSGGM   
Sbjct:   123 INNAGCMVNKRELTEDGLEKNFATNTLGVYVLTTALIPVLEKEH-DPRVITVSSGGMLVQ 181

Query:   205 HL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
              L TDD +    +FDG   YA+NKR QV LTE+W+  +    I F  MHPGW +TPGV  
Sbjct:   182 KLNTDDPQSERTAFDGTMVYAQNKRQQVVLTERWARAHP--AIHFSCMHPGWVDTPGVRL 239

Query:   264 SMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLV-SGSFYFDRAEAPKHLKFAATAASH 322
             SMP F+ R    LR+  +GADTVLWLAL P      SG F+ DR  AP HL  A T++S 
Sbjct:   240 SMPGFHARLGARLRSEAQGADTVLWLALAPAATAQPSGCFFQDRKPAPTHLPLARTSSSP 299

Query:   323 ARIDPIVDVLRSMA 336
             A  + ++++L  +A
Sbjct:   300 AEEEKLIEILEELA 313

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-060929-1134 dhrs12 "dehydrogenase/reductase (SDR family) member 12" [Danio rerio (taxid:7955)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 137/315 (43%), Positives = 198/315 (62%)

Query:    25 WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
             +R   + + G   +T +G++   + F P D+   + G++ ++TGAN+GIG A A  +A R
Sbjct:     4 YRNTVWFLKGLQEYTNSGYEAAERRFTPADLDVSVNGRSFIITGANSGIGKAAAYEIAKR 63

Query:    85 GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
             G TV++VCR+K++ E A   I  ++ +ENVH+ L D+SS  ++  FA+ FS +N  +HVL
Sbjct:    64 GGTVHLVCRNKDRAEEARKDIVEQSKSENVHVHLVDMSSPRKVWEFASGFS-QNHNLHVL 122

Query:   145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
             +NNAG + N R +T +G E NFA N LGTY +T +++P L K + + RVITVSSGGM   
Sbjct:   123 INNAGCMVNQRELTEDGLEKNFATNTLGTYILTTALIPTL-KRSENPRVITVSSGGMLVQ 181

Query:   205 HLT-DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
              L  +DL+F  GSFDG   YA+NKR QV +TE+W+  +KE  I F SMHPGWA+TP V  
Sbjct:   182 KLNVEDLQFEKGSFDGTMAYAQNKRQQVIMTEQWATQHKE--IHFSSMHPGWADTPAVRS 239

Query:   264 SMPSFNERFAGNLRTSEEGADTVLWLALQPK-EKLVSGSFYFDRAEAPKHLKFAATAASH 322
             SMP F E+    LRT  +GADTV+WLA+     +  SG F+ DR     HL  A +    
Sbjct:   240 SMPDFYEKMKNKLRTEAQGADTVVWLAVSDAASRQPSGLFFQDRKAVSTHLPLAFSKTPP 299

Query:   323 ARIDPIVDVLRSMAN 337
             A    +V++L  +A+
Sbjct:   300 AEDQKLVNLLEELAD 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|A0PJE2 DHRS12 "Dehydrogenase/reductase SDR family member 12" [Homo sapiens (taxid:9606)]

 Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
 Identities = 137/314 (43%), Positives = 194/314 (61%)

Query:    25 WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
             +R   +   G   +TK+G++   K+F P D++ +I G+  +VTG N+GIG ATA  +A R
Sbjct:     4 YRSVVWFAKGLREYTKSGYESACKDFVPHDLEVQIPGRVFLVTGGNSGIGKATALEIAKR 63

Query:    85 GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
             G TV++VCR +   E A   I  ++GN+N+ L + DLS   +I  F   F  ++K +HVL
Sbjct:    64 GGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEHK-LHVL 122

Query:   145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
             +NNAG + N R +T +G E NFA N LG Y +T  ++P+LEK   D RVITVSSGGM   
Sbjct:   123 INNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEH-DPRVITVSSGGMLVQ 181

Query:   205 HL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
              L T+DL+     FDG   YA+NKR QV LTE+W++ +    I F SMHPGWA+TPGV +
Sbjct:   182 KLNTNDLQSERTPFDGTMVYAQNKRQQVVLTERWAQGHP--AIHFSSMHPGWADTPGVRQ 239

Query:   264 SMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLV-SGSFYFDRAEAPKHLKFAATAASH 322
             +MP F+ RF   LR+  +GADT+LWLAL        SG F+ DR     HL  A  ++S 
Sbjct:   240 AMPGFHARFGDRLRSEAQGADTMLWLALSSAAAAQPSGRFFQDRKPVSTHLPLATASSSP 299

Query:   323 ARIDPIVDVLRSMA 336
             A  + ++++L  +A
Sbjct:   300 AEEEKLIEILEQLA 313

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-8104 flj13639 "flj13639" [Danio rerio (taxid:7955)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 130/314 (41%), Positives = 192/314 (61%)

Query:    25 WRVAAFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR 84
             +R +A+ + G   FTK  F   SKNF  +D++  + G++ ++TGAN+GIG A A  +A +
Sbjct:     4 YRNSAWFLKGLTEFTKGAFLSASKNFVEKDLETSMAGRSFMITGANSGIGKAAAMAIAKK 63

Query:    85 GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL 144
             G TV+MVCR+K+K E A + I  ++GN+ +++ + DLS   ++  F   F  K K ++VL
Sbjct:    64 GGTVHMVCRNKDKAEEARAEIVKESGNKEIYVHILDLSETKKVWEFVESFKKKYKTLNVL 123

Query:   145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
             +NNAG +   R +  EG E +FA N L  +   +S++PLLEK+ PD RVITVSSGGM   
Sbjct:   124 INNAGCMMTKREVNGEGLEKSFASNSLAVFIFIKSLIPLLEKS-PDPRVITVSSGGMLVQ 182

Query:   205 HL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
              L T +L+   G +DG   YA+NKR QV +TE++++ +    I F  MHPGW +TP +A 
Sbjct:   183 KLRTGNLQSQRGRYDGTMVYAQNKRQQVVMTEQFAKAHPS--IHFSVMHPGWVDTPTIAN 240

Query:   264 SMPSFNERFAGNLRTSEEGADTVLWLAL-QPKEKLVSGSFYFDRAEAPKHLKFAATAASH 322
             +MP F+      LRT+E+GADTV+WLA+ +   K  SG FY DR     HL  A T +S 
Sbjct:   241 AMPDFHSSMKERLRTTEQGADTVVWLAVSEAAAKNPSGRFYQDRKMVSAHLPLAWTHSSQ 300

Query:   323 ARIDPIVDVLRSMA 336
                   + V+  +A
Sbjct:   301 LEDQKFMSVMEDLA 314

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

DICTYBASE|DDB_G0288429 DDB_G0288429 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 120/317 (37%), Positives = 179/317 (56%)

Query:    34 GYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR 93
             G  N+T  GF++  ++F   D+   I  K+ ++TG N G+G+ T+  LA  G  V+++CR
Sbjct:    11 GLWNYTNRGFEKKKQHFNENDLNQDISSKHFIITGGNNGLGFQTSLELAKLGGNVHILCR 70

Query:    94 SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLEN 153
             ++EKGE A++ I+ K+ ++ VHL LCD+S I  IKSF + +  +   V VL++NAGV+  
Sbjct:    71 NQEKGEQAINEIKDKSKSDKVHLHLCDVSIIGSIKSFVDDWKKQGNSVDVLIHNAGVMLP 130

Query:   154 NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA------RVITVSSGGMYTAHLT 207
             NR  TSEG E  FA N+LG + +T+ ++     +   +      RVI VSSGGM T+ ++
Sbjct:   131 NREETSEGHEKTFATNLLGPFLLTKLLMCDDNNSGSGSGEGAHKRVIFVSSGGMLTSKMS 190

Query:   208 DDLEF-----NSG-SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV 261
              D EF     N    +DGM  YA  KR  + LTE +S+ Y+      YSMHPGW  T GV
Sbjct:   191 KDFEFKKFTTNKNLKWDGMRAYAETKRAIIYLTELFSQNYQS--FNSYSMHPGWVNTTGV 248

Query:   262 AKSMPSFNERFAGNLRTSEEGADTVLWLALQPK---EKLVSGSFYFDRAEAPKHLKFAAT 318
                MP F +     LRT E+G DT++WLA+ P        SG F+ DR    K +  + T
Sbjct:   249 MNGMPLFYKMTKSQLRTLEQGCDTIVWLAVSPTVEDHSKYSGQFFEDRQIVDKFIHNSHT 308

Query:   319 AASHARIDPIVDVLRSM 335
              +S   I+ + + L  +
Sbjct:   309 ESSQEDINSLWNYLNEI 325

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0050495 CG30495 [Drosophila melanogaster (taxid:7227)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 104/292 (35%), Positives = 158/292 (54%)

Query:    29 AFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV 88
             A G+ G + F    + +  K  K  D      GK  +VTG N G+G  T   LA RGATV
Sbjct:    17 AHGIVGIIAFCVRLYMQGGKFRKQTDET----GKVAIVTGGNTGLGKETVMELARRGATV 72

Query:    89 YMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA 148
             YM CR+KEK E A   I  +TGN NV    CDLSS+  I+ FA  F  + + +H+L+NNA
Sbjct:    73 YMACRNKEKVERARREIVKETGNSNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNA 132

Query:   149 GVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD 208
             GV      +T EGFE++  VN +G + +T  ++ +LE++AP +RV+ V+S       +  
Sbjct:   133 GVFWEPHRLTKEGFEMHLGVNHIGHFLLTNLLLGVLERSAP-SRVVVVASRAHERGQIKV 191

Query:   209 DLEFNSGSF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS 267
             D + NS  F D    Y ++K   +  T + ++  +  G+   +++PG A+T  +A++M  
Sbjct:   192 D-DINSSDFYDEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTE-IARNMIF 249

Query:   268 FNERFAGNL---------RTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP 310
             F  +FA  +         +T + GA T L+ AL P  + VSG ++ D A AP
Sbjct:   250 FQTKFAQTILRPLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFSDCALAP 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-040801-48 rdh12l "retinol dehydrogenase 12, like" [Danio rerio (taxid:7955)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 95/263 (36%), Positives = 149/263 (56%)

Query:    57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
             AR++GK  ++TGAN GIG  TA  LA RGA + M CR  EK E AL  ++  +GN++V +
Sbjct:     9 ARLDGKTVLITGANTGIGKETAIDLAKRGARIIMACRDMEKAEAALKEVKDSSGNQDVFI 68

Query:   117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTI 176
                DLS    I+ FA + + + K V++L+NNAGV+      T++GFE+   VN +G + +
Sbjct:    69 SSLDLSDSKSIRGFAEKINKEEKQVNILINNAGVMVCPYGKTADGFEMQIGVNHMGHFLL 128

Query:   177 TESMVPLLEKAAPDARVITVSSGGMYTAHL--TDDLE-FNSG-SFDGMEQYARNKRVQVA 232
             T  ++ L++++AP AR+I VSS    TAH   T +LE  NS  ++D  + Y ++K   V 
Sbjct:   129 TYLLLDLIKRSAP-ARIINVSS----TAHQWGTINLEDINSEKNYDKQKAYCQSKLANVL 183

Query:   233 LTEKWSEMYKEKGIGFYSMHPG------WAETPGVAKSMPSFNERFAGNLRTSEEGADTV 286
              T   ++  +  G+  YS+HPG      W       +++  F + F    +TS +GA T 
Sbjct:   184 FTRSLAKRLEGTGVTAYSLHPGVVQTDLWRHLSKPQQAVMWFTKPFT---KTSVQGAQTS 240

Query:   287 LWLALQPKEKLVSGSFYFDRAEA 309
             ++ A+ P  +  SG +Y D A A
Sbjct:   241 IYCAVDPALQTESGKYYSDCAPA 263

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0050491 CG30491 [Drosophila melanogaster (taxid:7227)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 90/255 (35%), Positives = 143/255 (56%)

Query:    61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
             GK  +VTGAN GIG  T   +A RG TVYM CR+ +K E A   I  +T N+ V+   CD
Sbjct:    45 GKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKNKYVYCRQCD 104

Query:   121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
             L+S   I+ F   F  + + +HVL+NNAGV+   R +TS+G EL   VN +G + +T  +
Sbjct:   105 LASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGIELQLGVNHMGHFLLTNLL 164

Query:   181 VPLLEKAAPDARVITVSSGGMYTAHL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
             + LL+K++P +R++ VSS       + T DL  +  S+D  + Y+++K   V  T + ++
Sbjct:   165 LDLLKKSSP-SRIVNVSSLAHTRGEINTGDLNSDK-SYDEGKAYSQSKLANVLFTRELAK 222

Query:   240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGN---------LRTSEEGADTVLWLA 290
               +   +   ++HPG  +T  + + M  FN  FAG          ++T   GA T L++A
Sbjct:   223 RLEGTNVTANALHPGVVDTE-IIRHMGFFNNFFAGLFVKPLFWPFVKTPRNGAQTSLYVA 281

Query:   291 LQPKEKLVSGSFYFD 305
             L P+ + V+G ++ D
Sbjct:   282 LDPELEKVTGQYFSD 296

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A0PJE2	DHR12_HUMAN	1, ., 1, ., -, ., -	0.4411	0.8554	0.9148	yes	no
A6QP05	DHR12_BOVIN	1, ., 1, ., -, ., -	0.4551	0.8702	0.9305	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00008975001	SubName- Full=Chromosome undetermined scaffold_213, whole genome shotgun sequence; (343 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037680001	SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (159 aa)			•						0.464

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	5e-94
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-76
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-50
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-36
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-35
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-34
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-34
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-31
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	7e-31
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-30
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	8e-27
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	6e-24
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-22
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-22
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-20
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	4e-19
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-18
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-17
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-17
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-17
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-17
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-17
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	9e-17
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-16
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-16
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-16
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-16
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	5e-16
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	9e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-15
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-15
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-15
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	4e-15
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-15
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	5e-15
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	6e-15
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-15
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-14
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-14
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-14
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-14
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-14
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	6e-14
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-14
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-13
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-13
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-13
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-13
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-13
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	4e-13
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	4e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-13
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	5e-13
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-13
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-13
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-12
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-12
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-12
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-12
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-12
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-12
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	4e-12
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-12
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-12
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	8e-12
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-11
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-11
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-11
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-11
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-11
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	5e-11
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-11
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	6e-11
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-11
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-11
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-10
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-10
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-10
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-10
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-10
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-10
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-10
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	4e-10
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-10
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	5e-10
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	5e-10
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	6e-10
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	6e-10
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	8e-10
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	8e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-10
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-09
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-09
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-09
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-09
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-09
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	4e-09
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-09
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	5e-09
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	5e-09
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	8e-09
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-09
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-08
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-08
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-08
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-08
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	5e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-08
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-08
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	8e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	8e-08
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	8e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	9e-08
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-07
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-07
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-07
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-07
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-07
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-07
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-07
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	6e-07
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	6e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	7e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-07
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	7e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-07
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	8e-07
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-07
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-06
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-06
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-06
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-06
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-06
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-06
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-06
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-06
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-06
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-06
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	5e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	5e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	6e-06
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-06
pfam08659	181	pfam08659, KR, KR domain	7e-06
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	7e-06
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	7e-06
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	8e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-05
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-05
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-05
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-05
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-05
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-05
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-05
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	5e-05
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	5e-05
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-05
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	8e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-04
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-04
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-04
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-04
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-04
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-04
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-04
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-04
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-04
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-04
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-04
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-04
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-04
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-04
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	5e-04
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	6e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	9e-04
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.001
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	0.001
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	0.002
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.002
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.002
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.002
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	0.002
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.002
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.003
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	0.003
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	0.004

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score =  279 bits (716), Expect = 5e-94
 Identities = 123/258 (47%), Positives = 167/258 (64%), Gaps = 5/258 (1%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G++ ++TGAN+GIG A A  +A RG TV+MVCR++ + E A   I +++GN+N+ L + D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           +S   ++  F   F  + K +HVL+NNAG + N R +T +G E NFA N LGTY +T  +
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHL 120

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
           +P+LEK   D RVITVSSGGM    L T++L+    +FDG   YA+NKR QV +TE+W++
Sbjct: 121 IPVLEK-EEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMTEQWAK 179

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL-QPKEKLV 298
            + E  I F  MHPGWA+TP V  SMP F+ RF   LR+ E+GADTV+WLAL     K  
Sbjct: 180 KHPE--IHFSVMHPGWADTPAVRNSMPDFHARFKDRLRSEEQGADTVVWLALSSAAAKAP 237

Query: 299 SGSFYFDRAEAPKHLKFA 316
           SG FY DR     HL  A
Sbjct: 238 SGRFYQDRKPVSTHLPLA 255

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  235 bits (602), Expect = 2e-76
 Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 6/254 (2%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  V+TGAN+GIG  TA  LA RGA V + CR++EKGE A + I+ +TGN  V +   D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSS+  ++ FA  F  +   + +L+NNAG++   R +T +GFEL FAVN LG + +T  +
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLL 120

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHL--TDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           +P+L KA+  +R++ VSS       +   D    N+  +   + Y ++K   +  T + +
Sbjct: 121 LPVL-KASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTRELA 179

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL---RTSEEGADTVLWLALQPKE 295
              +  G+   ++HPG   T  + ++   F           ++ E+GA T L+ A  P+ 
Sbjct: 180 RRLEGTGVTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALYAATSPEL 239

Query: 296 KLVSGSFYFDRAEA 309
           + VSG ++ D    
Sbjct: 240 EGVSGKYFSDCKIK 253

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  169 bits (430), Expect = 1e-50
 Identities = 90/262 (34%), Positives = 133/262 (50%), Gaps = 13/262 (4%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  ++TGAN GIG  TA  LA RGA V M CR   K E A + IR  T N  V +   D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           L+S+  I++FA  F  +   + VL+NNAGV+      T +GFE+ F VN LG + +T  +
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHL-TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
           + LL+K+AP +R++ VSS       +  DDL     S++    Y ++K   V  T + + 
Sbjct: 121 LDLLKKSAP-SRIVNVSSLAHKAGKINFDDLNSEK-SYNTGFAYCQSKLANVLFTRELAR 178

Query: 240 MYKEKGIGFYSMHPGWAETPGV-------AKSMPSFNERFAGNLRTSEEGADTVLWLALQ 292
             +  G+   ++HPG   T                 N  F   ++T  EGA T ++LAL 
Sbjct: 179 RLQGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQTSIYLALA 238

Query: 293 PKEKLVSGSFYFDRAE---APK 311
            + + VSG ++ D      AP+
Sbjct: 239 EELEGVSGKYFSDCKLKEPAPE 260

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  130 bits (329), Expect = 2e-36
 Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 35/254 (13%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVH-LELC 119
           K  +VTGAN GIG+     LA  G  TV +  R  E+G+ A+  +R++  +   H L++ 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTI 176
           D +S   I++ A+    K   + +LVNNAG+          T E        N  GT  +
Sbjct: 61  DDAS---IEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDV 117

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           T++++PLL K +P  R++ VSSG      LT               Y  +K    ALT  
Sbjct: 118 TQALLPLL-KKSPAGRIVNVSSG---LGSLTSA-------------YGVSKAALNALTRI 160

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK 296
            ++  KE GI   +  PGW +T              A   +T EEGA+T ++LAL P + 
Sbjct: 161 LAKELKETGIKVNACCPGWVKT--------DMGGGKA--PKTPEEGAETPVYLALLPPDG 210

Query: 297 LVSGSFYFDRAEAP 310
             +G F+ D+   P
Sbjct: 211 EPTGKFFSDKKVVP 224

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  130 bits (328), Expect = 3e-35
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 21/245 (8%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTG  +G+G  T   LA  GA V +  R  +    AL+ I      + V + + D
Sbjct: 26  GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI------DGVEVVMLD 79

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           L+ +  +++FA RF    + + +L+NNAGV+        +G+E  FA N LG + +   +
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLL 139

Query: 181 VPLLEKAAPDARVITVSSGG-MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
            P L   A  ARV+ +SS G   +    DD  F  G +D    Y ++K           +
Sbjct: 140 WPALAAGAG-ARVVALSSAGHRRSPIRWDDPHFTRG-YDKWLAYGQSKTANALFAVHLDK 197

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAG-----------NLRTSEEGADTVLW 288
           + K++G+  +S+HPG   TP + + +P   +   G             +T  +GA T +W
Sbjct: 198 LGKDQGVRAFSVHPGGILTP-LQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVW 256

Query: 289 LALQP 293
            A  P
Sbjct: 257 AATSP 261

Length = 315

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  124 bits (314), Expect = 4e-34
 Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 31/252 (12%)

Query: 64  CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
            +VTGA++GIG A A  LA  GA V +  R++E      +          V     D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQ---ADVSD 57

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMV 181
             ++++       +   + +LVNNAG+     L  +T E ++    VN+ G + +T + +
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALTEKWS 238
           P + K     R++ +SS                     +     YA +K     LT   +
Sbjct: 118 PHM-KKQGGGRIVNISS---------------VAGLRPLPGQAAYAASKAALEGLTRSLA 161

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER------FAGNLRTSEEGADTVLWLALQ 292
                 GI   ++ PG  +TP +AK  P   E+        G L T EE A+ V++LA  
Sbjct: 162 LELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLA-S 220

Query: 293 PKEKLVSGSFYF 304
            +   ++G    
Sbjct: 221 DEASYITGQVIP 232

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 5e-34
 Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 6/202 (2%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G+  VVTGAN G+GY TA  LA++GA V +  R+ +KG+ A + I + T   +V L+  D
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           L+S+  +++ A+        + +L+NNAGV+   +  T++GFEL F  N LG + +T  +
Sbjct: 76  LTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLL 135

Query: 181 VPLLEKAAPDARVITVSSGG--MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           +  L    P +RV+TVSSGG  +  A   DDL++    ++ +  Y ++K   +  T +  
Sbjct: 136 LDRL-LPVPGSRVVTVSSGGHRIRAAIHFDDLQWER-RYNRVAAYGQSKLANLLFTYELQ 193

Query: 239 EMYKEKGIGFYSM--HPGWAET 258
                 G    ++  HPG + T
Sbjct: 194 RRLAAAGATTIAVAAHPGVSNT 215

Length = 306

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 1e-31
 Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 22/260 (8%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  VVTGA+ G+G   A  LA+ GA V +  R++ KGE A++AIR+   +  + L   D
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD 73

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLE-NNRLITSEGFELNFAVNVLGTYTITES 179
           LSS+  + +   +   + +P+H+L+NNAGV+    R  T++GFEL F  N LG + +T  
Sbjct: 74  LSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAH 133

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           ++PLL   A  ARV + SS       +  DDL +   S+ GM  Y+++K        +  
Sbjct: 134 LLPLLR--AGRARVTSQSSIAARRGAINWDDLNWER-SYAGMRAYSQSKIAVGLFALELD 190

Query: 239 EMYKEKGIGFYS--MHPGWAET------PGVAKSMPSFNERFAGNLR-------TSEEGA 283
              +  G G  S   HPG A T      P V +   +   R   +L        T E   
Sbjct: 191 RRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAI 250

Query: 284 DTVLWLALQPKEKLVSGSFY 303
              L+ A  P  +   G+FY
Sbjct: 251 LPALYAATSPDAE--GGAFY 268

Length = 313

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  116 bits (293), Expect = 7e-31
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 29/257 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET-ALSAIRSKTGNENVHL 116
            + GK  +VTGA++GIG A A  LA  GA V +  R  E+    AL+A   + G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 117 ELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLG 172
              D+S   E +++       +   + +LVNNAG+   +  +   T E ++    VN+LG
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            + +T + +PL++K     R++ +SS                    G   YA +K   + 
Sbjct: 122 AFLLTRAALPLMKK----QRIVNISSVAGLGGPP------------GQAAYAASKAALIG 165

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA--------GNLRTSEEGAD 284
           LT+  +     +GI   ++ PG+ +TP  A    +  E           G L T EE A 
Sbjct: 166 LTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAA 225

Query: 285 TVLWLALQPKEKLVSGS 301
            V +LA       ++G 
Sbjct: 226 AVAFLASDEAASYITGQ 242

Length = 251

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  116 bits (293), Expect = 2e-30
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 24/279 (8%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  ++TGAN+GIG+ TA   A  GA V + CR+  +   A+S I  +     V     D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           L+S+  ++ FA  F  KN P+HVLV NA V      +T +G E  F VN LG + + + +
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD------------GMEQYARNKR 228
             +L ++AP ARVI VSS     +H   DL  + G+ D             M  Y R K 
Sbjct: 121 EDVLRRSAP-ARVIVVSS----ESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKL 175

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA---GNLRTSEEGADT 285
             +  + +       +GI   S+HPG      + ++   +   F       ++ ++GA T
Sbjct: 176 CNILFSNELHRRLSPRGITSNSLHPGNMMYSSIHRNWWVYTLLFTLARPFTKSMQQGAAT 235

Query: 286 VLWLALQPKEKLVSGSFYFD---RAEAPKHLKFAATAAS 321
            ++ A  P+ + + G  YF+   R       +  ATA  
Sbjct: 236 TVYCATAPELEGLGG-MYFNNCFRCLPSPEAQSEATAQQ 273

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  107 bits (268), Expect = 8e-27
 Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 39/285 (13%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
              V+TGA++G+G A A+ LA RG   V M CR   K E A   +     + +V L  CD
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSV-LH-CD 59

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTIT 177
           L+S+  ++ F + F    +P+  LV NA V          T++GFEL   VN LG + +T
Sbjct: 60  LASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLT 119

Query: 178 ESMVPLLEKA-APDARVITVSS--------GGMY--TAHLTDDLEF-----------NSG 215
             ++  L+++     R++ V S         G     A L D               + G
Sbjct: 120 NLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMIDGG 179

Query: 216 SFDGMEQYARNKRVQVALTEKWSEMYKEK-GIGFYSMHPGWAETPGVAKS--------MP 266
            F+G + Y  +K   +  T +      E+ GI F S++PG     G+ +          P
Sbjct: 180 EFEGAKAYKDSKVCNMLTTYELHRRLHEETGITFNSLYPGCIAETGLFREHYPLFRTLFP 239

Query: 267 SFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPK 311
            F +       + EE  + +  +   P    VSG  Y+   +A  
Sbjct: 240 PFQKYITKGYVSEEEAGERLAAVIADPSLG-VSGV-YWSWGKASG 282

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 97.8 bits (244), Expect = 6e-24
 Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 21/200 (10%)

Query: 65  VVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
           ++TGA+ GIG      L +RG  TV   CR      T L+A+     +  +H+   D++ 
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDPS-AATELAAL--GASHSRLHILELDVTD 58

Query: 124 ITEIKSFANRFS--LKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITE 178
             EI   A   +  L +  + VL+NNAG+L +      + SE     F VNVLG   +T+
Sbjct: 59  --EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           + +PLL K A  A++I +SS       + D+      S+    + A N      LT+  +
Sbjct: 117 AFLPLLLKGAR-AKIINISSRV---GSIGDNTSGGWYSY-RASKAALN-----MLTKSLA 166

Query: 239 EMYKEKGIGFYSMHPGWAET 258
              K  GI   S+HPGW  T
Sbjct: 167 VELKRDGITVVSLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 93.8 bits (234), Expect = 2e-22
 Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 22/242 (9%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
             +EG+  +VTGA  GIG A A  LA+ GA V +V    +        + +  G      
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG--KARA 59

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
              D+     +K+           + +LV NAG+        +  E +E    VN+ GT+
Sbjct: 60  RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTF 119

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            +T++ +P L +A     V+T S  G                + G+  YA +K   V  T
Sbjct: 120 LLTQAALPALIRAGGGRIVLTSSVAGPRVG------------YPGLAHYAASKAGLVGFT 167

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAK-SMPSFNERFA-----GNLRTSEEGADTVLW 288
              +     + I   S+HPG  +TP         + E  A     G L   E+ A  VL+
Sbjct: 168 RALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLF 227

Query: 289 LA 290
           LA
Sbjct: 228 LA 229

Length = 251

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 92.2 bits (229), Expect = 8e-22
 Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 24/239 (10%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  ++GK   +TG   G+G ATA  LA+RGA V ++ R        L            
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG-VPADALRIG 59

Query: 115 HLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
            ++L D  +    +     +F      +  LVN AG      +    ++ ++  + VNV 
Sbjct: 60  GIDLVDPQAARRAVDEVNRQFG----RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVK 115

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            T   +++ +P L  A+   R++ + +G    A              GM  YA  K    
Sbjct: 116 TTLNASKAALPAL-TASGGGRIVNIGAGAALKAGP------------GMGAYAAAKAGVA 162

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
            LTE  +    ++GI   ++ P   +TP     MP  +  F     T E+ A  + +L 
Sbjct: 163 RLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP--DADF-SRWVTPEQIAAVIAFLL 218

Length = 239

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 89.0 bits (221), Expect = 1e-20
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 26/204 (12%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           I+ K  +VTGAN GIG A  E L + GA  VY   R       + + + +K G+  V   
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPG----SAAHLVAKYGD-KVVPL 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFE---LNFAVNVLGTY 174
             D++    IK+ A     + K V V++NNAGVL+   L+     E       VNV G  
Sbjct: 56  RLDVTDPESIKAAAA----QAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLL 111

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            + ++  P+L KA     ++ ++S                  F  M  Y+ +K    +LT
Sbjct: 112 RLAQAFAPVL-KANGGGAIVNLNSVASLKN------------FPAMGTYSASKSAAYSLT 158

Query: 235 EKWSEMYKEKGIGFYSMHPGWAET 258
           +        +G    S+HPG  +T
Sbjct: 159 QGLRAELAAQGTLVLSVHPGPIDT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 85.2 bits (212), Expect = 3e-19
 Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 24/239 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  +VTGA+ GIG A A  LA+ GA V +   ++E  E   + +R+  G     + + 
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG--EARVLVF 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+S    +++           + +LVNNAG+  +  L  ++ E ++    VN+ GT+ + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 178 ESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
            + +P +   A   R++ +SS  G+             G+  G   Y+  K   +  T+ 
Sbjct: 122 RAALPPM-IKARYGRIVNISSVSGVT------------GNP-GQTNYSAAKAGVIGFTKA 167

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
            +     +GI   ++ PG+ +T                    G L   EE A+ V +LA
Sbjct: 168 LALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLA 226

Length = 246

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 85.9 bits (213), Expect = 4e-19
 Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 34/239 (14%)

Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENV-HLELCDLS 122
           ++TGA++G+G ATA+ LA  G   V M CR   K E A  +      +  V HL+L  L 
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD 60

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITES 179
           S   ++ F + F    +P+ VLV NA V          T++GFEL+   N LG + ++  
Sbjct: 61  S---VRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRL 117

Query: 180 MVPLLEKA-APDARVITVSS---------GGMY-TAHLTD---------DLEFNS----G 215
           ++  L+K+  P  R+I V S         G +   A+L D          L  ++    G
Sbjct: 118 LLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG 177

Query: 216 SFDGMEQYARNKRVQVALTEKWSEMYKEK-GIGFYSMHPGW-AETPGVAKSMPSFNERF 272
            FDG + Y  +K   +   +++   Y E+ GI F S++PG  A T    + +P F   F
Sbjct: 178 EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF 236

Length = 308

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 83.3 bits (206), Expect = 2e-18
 Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 24/208 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +EGK  +VTG   GIGYA  E LA  GA VY   R++++ +  L+  R K     V   
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGS 60

Query: 118 LCDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVL 171
           +CD+SS +E    + + A+ F      +++LVNNAG          T E + L  + N  
Sbjct: 61  VCDVSSRSERQELMDTVASHF---GGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFE 117

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
             Y ++    PLL KA+ +  ++ +SS     A         SG+  G  + A N+  + 
Sbjct: 118 AAYHLSRLAHPLL-KASGNGNIVFISSVAGVIA-------VPSGAPYGATKGALNQLTR- 168

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           +L  +W+    +  I   ++ P    TP
Sbjct: 169 SLACEWA----KDNIRVNAVAPWVIATP 192

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 80.8 bits (200), Expect = 2e-17
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 4/149 (2%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TGA++GIG   A+ LA RG  + +V R ++K E     +  KTG E V +  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE-VEVIP 62

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI-TSEGFELN-FAVNVLGTYTI 176
            DLS    ++   +    +  P+ VLVNNAG       +  S   E     +N+L    +
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAH 205
           T++++P + +      +I + S       
Sbjct: 123 TKAVLPGMVERG-AGHIINIGSAAGLIPT 150

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TG ++GIG A A  LA++G  V    R+ +K E+          N+N+ +   D++  
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGEL-----LNDNLEVLELDVTDE 58

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
             IK+       +   + VLVNNAG      L   + E     F VNV G   +T + +P
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLP 118

Query: 183 LLEKAAPDARVITVSS 198
           L+ +     R++ VSS
Sbjct: 119 LM-RKQGSGRIVNVSS 133

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 22/215 (10%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE--NVHLEL 118
           GK+ ++TG ++GIG A A+ L   GA V +V RS+ K E A+  I ++       V    
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            DLS   E++    +   K  P  ++VN AG+        +T+E FE    VN  G+  +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 177 TESMVPLLEKAAPDARVITVSSG-GMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
             +++PL+ K      ++ VSS   +                 G   Y  +K     L E
Sbjct: 121 AHAVLPLM-KEQRPGHIVFVSSQAALV-------------GIYGYSAYCPSKFALRGLAE 166

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVA---KSMPS 267
              +  K   I    ++P   +TPG     K+ P 
Sbjct: 167 SLRQELKPYNIRVSVVYPPDTDTPGFEEENKTKPE 201

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 13/144 (9%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G   ++TG  +GIG A A      G TV +  R +E+   A      K    N+H  + D
Sbjct: 5   GNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEA------KKELPNIHTIVLD 58

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLGTYT 175
           +     +++ A     +   + +L+NNAG+     L +      +  +     N++G   
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPA-SDLDKADTEIDTNLIGPIR 117

Query: 176 ITESMVPLLEKAAPDARVITVSSG 199
           + ++ +P L K  P+A ++ VSSG
Sbjct: 118 LIKAFLPHL-KKQPEATIVNVSSG 140

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +EGK  +VTGA+ GIG A AE LA++GA V +   S E G  AL A     G +     
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK-ALAV 60

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             D+S    ++   +    +   V +LVNNAG+  +N L+    E ++     N+ G + 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +T+++   + K     R+I +SS
Sbjct: 121 LTKAVARPMMKQR-SGRIINISS 142

Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 78.8 bits (195), Expect = 5e-17
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 31/249 (12%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
             ++GK  ++TGA++GIG ATA  LA  GA V +  R +E+    L A+  + G      
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER----LEALADEIGAGAALA 57

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTY 174
              D++    +++       +   + +LVNNAG+   + L  +  + ++     NV G  
Sbjct: 58  LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLL 117

Query: 175 TITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
             T +++P +        +I + S  G Y              + G   Y   K    A 
Sbjct: 118 NGTRAVLPGM-VERKSGHIINLGSIAGRY-------------PYPGGAVYGATKAAVRAF 163

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAET--------PGVAKSMPSFNERFAGNLRTSEEGADT 285
           +    +     GI    + PG  ET         G  +      +   G   T E+ A+ 
Sbjct: 164 SLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG--GTALTPEDIAEA 221

Query: 286 VLWLALQPK 294
           VL+ A QP+
Sbjct: 222 VLFAATQPQ 230

Length = 246

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 79.6 bits (197), Expect = 9e-17
 Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TGA++G+G   A+ LA RG  V M CR+ +K E A  A       ++  +   DL  +
Sbjct: 10  IITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAA--AQELGIPPDSYTIIHIDLGDL 67

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITESMV 181
             ++ F + F    KP+  LV NA V   L    L + +G+EL+ A N LG + +   ++
Sbjct: 68  DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLL 127

Query: 182 PLLEKA-APDARVI---TVSS-----GGMYTAHLTDDLEFNSGSFDGMEQ---------- 222
             L+K+ APD R++   TV++     GG        DL    G   G E           
Sbjct: 128 EDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL----GDLSGFEAGFKAPISMAD 183

Query: 223 ---------YARNKRVQVALTEKWSEMY-KEKGIGFYSMHPGW-AETP 259
                    Y  +K   +    +    Y +  GI F S++PG  A+TP
Sbjct: 184 GKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231

Length = 322

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 32/237 (13%)

Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENV-HLELCDLS 122
           ++TGA++G+G   A+ LA+ G   V M CR   K E A  ++     +  + HL   DL 
Sbjct: 7   IITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHL---DLG 63

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITES 179
           S+  ++ F  +F    +P+  LV NA V          T++GFEL+   N LG + +   
Sbjct: 64  SLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNL 123

Query: 180 MVPLLEKAA-PDARVITVSS--------GGMY--TAHLTDDLEFNSG-----------SF 217
           ++  L+ +   D R+I V S         G     A+L D     +G            F
Sbjct: 124 LLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEF 183

Query: 218 DGMEQYARNKRVQVALTEKWSEMY-KEKGIGFYSMHPGW-AETPGVAKSMPSFNERF 272
            G + Y  +K   +    +    +  E GI F S++PG  A+T    + +P F   F
Sbjct: 184 KGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF 240

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 77.5 bits (191), Expect = 2e-16
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK  +VTG + GIG   A+G    GA V +  R   K E    A    +         
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISAR---KAEACADAAEELSAYGECIAIP 60

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            DLSS   I++   R + ++  + VLVNNAG      L      G++    +NV   + +
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFL 120

Query: 177 TESMVPLLEKAAPD---ARVITVSS 198
           T++++PLL  AA     ARVI + S
Sbjct: 121 TQALLPLLRAAATAENPARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 26/238 (10%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTGA+ GIG A A  LA+ GA V +  RS+E     +  I++     N      D+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADV 58

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITES 179
           S    +++   +   +  PV +LVNNAG+  +N L+  + E ++    VN+ G + +T++
Sbjct: 59  SDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 180 MVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           ++  + K     R+I +SS  G +             G+  G   YA +K   +  T+  
Sbjct: 119 VIRAMIKRRS-GRIINISSVVGLI-------------GNP-GQANYAASKAGVIGFTKSL 163

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----AGNLRTSEEGADTVLWLA 290
           ++    +GI   ++ PG+ +T           E+       G L T EE A+ V +LA
Sbjct: 164 AKELASRGITVNAVAPGFIDTDMTDALPEKVKEKILKQIPLGRLGTPEEVANAVAFLA 221

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 27/243 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHL 116
           ++ GK  +VTGA+ GIG A AE LA  GA V +    ++E  +  L  I+ + G  +   
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG--DAIA 59

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGT 173
              D+SS  ++++   +   K   + +LVNNAG+  N  L+   T E ++    VN+ G 
Sbjct: 60  VKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGV 118

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
             +T   +P + K      V   S  G+  A                  Y+ +K    A 
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE-------------VLYSASKGAVNAF 165

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN------ERFAGNLRTSEEGADTVL 287
           T+  ++     GI   ++ PG  +T  +  S    +      E   G L   EE A  VL
Sbjct: 166 TKALAKELAPSGIRVNAVAPGAIDTE-MWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVL 224

Query: 288 WLA 290
           +LA
Sbjct: 225 FLA 227

Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 41/252 (16%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VT A++GIG A A  LA  GA V +  R++E  E A S +R   G   V   + D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELR--AGGAGVLAVVAD 58

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAG------VLENNRLITSEGFELNFAVNVLGTY 174
           L+   +I     +       V +LVNNAG        E    +T E +   F + +L   
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAE----LTDEDWLEAFDLKLLSVI 114

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            I  +++P +++     R++ +SS  +       +L  ++ +  G+    +    ++A  
Sbjct: 115 RIVRAVLPGMKERG-WGRIVNISSLTVKEP--EPNLVLSNVARAGLIGLVKTLSRELA-- 169

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGV-------AKSMPSFNERF---------AGNLRT 278
                     G+   S+ PG+ +T  V       A+      E            G +  
Sbjct: 170 --------PDGVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGK 221

Query: 279 SEEGADTVLWLA 290
            EE A  + +LA
Sbjct: 222 PEELAALIAFLA 233

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 76.2 bits (188), Expect = 5e-16
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 25/218 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTGA+ GIG+  A GLA  GA + +  R++EK E A   I  K G E      CD
Sbjct: 5   GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIE-KEGVE-ATAFTCD 62

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFEL-NF----AVNVLGTYT 175
           +S    IK+           + +LVNNAG+    R   +E F    +     VN+ G + 
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGI---IRRHPAEEFPEAEWRDVIDVNLNGVFF 119

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++++   + K     ++I + S       L  +L         +  YA +K     LT+
Sbjct: 120 VSQAVARHMIKQG-HGKIINICS-------LLSEL-----GGPPVPAYAASKGGVAGLTK 166

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNER 271
             +  +   GI   ++ PG+  T       + P FN+ 
Sbjct: 167 ALATEWARHGIQVNAIAPGYFATEMTEAVVADPEFNDD 204

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 75.5 bits (186), Expect = 9e-16
 Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 34/260 (13%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG------------ETALSAIRSK 108
           GK   VTGA+ GIG A A  LA  GATV +  ++  +G            E     I + 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNF 166
            G       + D+    ++++       +   + +LVNNAG   L       ++ F+L  
Sbjct: 63  GG--QALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQ 120

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
            VN+ GTY ++++ +P + K A    ++ +S               +     G   YA  
Sbjct: 121 RVNLRGTYLLSQAALPHMVK-AGQGHILNISP------------PLSLRPARGDVAYAAG 167

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADT 285
           K     LT   +   +  GI   S+ P  A ETP   +     +   A   R+ E  +D 
Sbjct: 168 KAGMSRLTLGLAAELRRHGIAVNSLWPSTAIETPAATELSGGSDPARA---RSPEILSDA 224

Query: 286 VLWLALQPKEKLVSGSFYFD 305
           VL +  +P  +  +G    D
Sbjct: 225 VLAILSRPAAE-RTGLVVID 243

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           +TGA++GIG ATA   A  G  + +V RS++  E   + +RS            DLS+  
Sbjct: 11  ITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV--KAAAYSIDLSNPE 68

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITESMVPL 183
            I         +     VL+NNAG+     L+      ++    +N+   +    +++P 
Sbjct: 69  AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128

Query: 184 LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE 243
           + +A     +I VSS     A            F     Y  +K    A T+  +E  + 
Sbjct: 129 M-RARGGGLIINVSSIAARNA------------FPQWGAYCVSKAALAAFTKCLAEEERS 175

Query: 244 KGIGFYSMHPG------WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL 297
            GI   ++  G      W +T  V        +R A  + + E+ A T+L LA  P   +
Sbjct: 176 HGIRVCTITLGAVNTPLW-DTETVQADF----DRSA--MLSPEQVAQTILHLAQLPPSAV 228

Query: 298 V 298
           +
Sbjct: 229 I 229

Length = 241

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 26/204 (12%)

Query: 64  CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
            ++TG  +GIG   A   A RGA V ++    EKG    +    K G + VH   CD+S 
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKV-VILDINEKGAEETANNVRKAGGK-VHYYKCDVSK 59

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITESMV 181
             E+   A +   +   V +L+NNAGV+   +L+    E  E  F VN L  +  T++ +
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 182 P-LLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           P +LE+      ++T++S  G +  A L D              Y  +K   V   E   
Sbjct: 120 PDMLER--NHGHIVTIASVAGLISPAGLAD--------------YCASKAAAVGFHESLR 163

Query: 239 -EM--YKEKGIGFYSMHPGWAETP 259
            E+  Y + GI    + P +  T 
Sbjct: 164 LELKAYGKPGIKTTLVCPYFINTG 187

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 31/239 (12%)

Query: 64  CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
            +VTGA+ GIG A A  LA  GA V +  RS E+G   +       G + + +  CD+S 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVV-CDVSD 59

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITESMV 181
             ++K+       +  P+ +LVNNAG+  +N L+    E ++     N+ G + +T++++
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 182 PLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
            ++ K     R+I +SS  G+             G+  G   YA +K   +  T+  ++ 
Sbjct: 120 RIMIKQR-SGRIINISSVVGLM------------GNA-GQANYAASKAGVIGFTKSLAKE 165

Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERF---------AGNLRTSEEGADTVLWLA 290
              + I   ++ PG+ +T    K     +E+           G   T EE A+ V +LA
Sbjct: 166 LASRNITVNAVAPGFIDTDMTDK----LSEKVKKKILSQIPLGRFGTPEEVANAVAFLA 220

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 3e-15
 Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 26/246 (10%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M     GK  +VTG  AGIG ATA   A  GA V +  R    GE  ++ IR + G E +
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIR-EAGGEAL 59

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-LENNRLI--TSEGFELNFAVNVL 171
            +  CD++   E+K+   +       +    NNAG+ +E  RL   +   F+    VNV 
Sbjct: 60  FVA-CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVK 118

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G +   +  +PL+      A V T S  G+             G+   M  YA +K   +
Sbjct: 119 GVWLCMKYQIPLMLAQGGGAIVNTASVAGL-------------GAAPKMSIYAASKHAVI 165

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGV--AKSMPSFNERFA------GNLRTSEEGA 283
            LT+  +  Y +KGI   ++ P   +T     A         FA      G +   EE A
Sbjct: 166 GLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVA 225

Query: 284 DTVLWL 289
             VL+L
Sbjct: 226 SAVLYL 231

Length = 253

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 73.7 bits (181), Expect = 4e-15
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+    GK  +VTGA  GIG AT + LA  GA V  V R++       S +R   G E V
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQAD---LDSLVRECPGIEPV 57

Query: 115 HLELCDLSSITEIKSFANRFSLKN-KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
            ++L D          A   +L +  PV +LVNNA V        +T E F+ +F VNV 
Sbjct: 58  CVDLSDWD--------ATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVR 109

Query: 172 GTYTITESMVPLLEKAAPDARVITVSS 198
               +++ +   +        ++ VSS
Sbjct: 110 AVIHVSQIVARGMIARGVPGSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 72.8 bits (179), Expect = 5e-15
 Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 21/203 (10%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA+ GIG   A  LA  G  V +  R+ E                +V     D    
Sbjct: 4   LVTGASRGIGIEIARALARDGYRVSLGLRNPED------LAALSASGGDVEAVPYDARDP 57

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
            + ++  +    +   + VLV+NAG+     L   +    E +F++NV+    +T +++P
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALLP 117

Query: 183 LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK 242
            L + A   RV+ ++S              N+G       Y+ +K    AL     +   
Sbjct: 118 AL-REAGSGRVVFLNSLSGKRVL-----AGNAG-------YSASKFALRALAHALRQEGW 164

Query: 243 EKGIGFYSMHPGWAETPGVAKSM 265
           + G+   ++ PG+ +TP      
Sbjct: 165 DHGVRVSAVCPGFVDTPMAQGLT 187

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 73.3 bits (180), Expect = 5e-15
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 16/206 (7%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R  G+  +VTGA+ GIG A A  L   G  V    R  +K E AL+A     G   +   
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIE-ALAAECQSAGYPTLFPY 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYT 175
            CDLS+  +I S  +    +++ V V +NNAG+     L++   EG++  F VNVL    
Sbjct: 62  QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSI 121

Query: 176 IT-ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            T E+   + E+   D  +I ++S   +          +   F     YA  K    ALT
Sbjct: 122 CTREAYQSMKERNVDDGHIININSMSGHRV-----PPVSVFHF-----YAATKHAVTALT 171

Query: 235 EKWSEMYKE--KGIGFYSMHPGWAET 258
           E   +  +E    I   S+ PG  ET
Sbjct: 172 EGLRQELREAKTHIRATSISPGLVET 197

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 73.3 bits (180), Expect = 6e-15
 Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 36/254 (14%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           +TG++ G+G A A  L  +G  V +  RS+++     +  ++        + + DLSS+ 
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKR----AADAKAAC-PGAAGVLIGDLSSLA 66

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVL-ENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
           E +  A++ +   +    +++NAG+L   NR     G     AVNVL  Y +T  +    
Sbjct: 67  ETRKLADQVNAIGR-FDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALIRR-- 123

Query: 185 EKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNK----RVQVALTEKWSE 239
               P  R+I +SSG     + + DD+++ +   +    Y+ +K     +  A+  +W +
Sbjct: 124 ----PK-RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVARRWKD 178

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK-LV 298
           +         ++HPGW     V   M       AG     E+G  T +WLA     + L 
Sbjct: 179 VSSN------AVHPGW-----VPTKMGG-----AGAPDDLEQGHLTQVWLAESDDPQALT 222

Query: 299 SGSFYFDRAEAPKH 312
           SG +++ R     H
Sbjct: 223 SGGYFYHRRLQEPH 236

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 73.0 bits (179), Expect = 6e-15
 Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 25/247 (10%)

Query: 63  NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS 122
             +VTG  AGIG A A  LA  GA+V +     E  E   +AI+ + G + + LE C+++
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQ-QAGGQAIGLE-CNVT 58

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNA---GVLENNRLITSEGFELNFAVNVLGTYTITES 179
           S  ++++       +   + +LVNNA   G    +  +T E FE  F +N+   + +++ 
Sbjct: 59  SEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQL 118

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
             P ++KA     ++ +SS  M + +              +  Y  +K     +T   + 
Sbjct: 119 CAPHMQKAG-GGAILNISS--MSSENKNVR----------IAAYGSSKAAVNHMTRNLAF 165

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF------AGNLRTSEEGADTVLWLALQP 293
               KGI   ++ PG  +T  +A  +    ER        G L   E+ A+  L+L   P
Sbjct: 166 DLGPKGIRVNAVAPGAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLC-SP 224

Query: 294 KEKLVSG 300
               VSG
Sbjct: 225 ASAWVSG 231

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 7e-15
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
            +  D++  + GK  ++TGA++GIG ATA  +A  GATV++V R+ E  +  ++ IR+K 
Sbjct: 360 ARRRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG 419

Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
           G    H   CDL+    +         ++  V  LVNNAG
Sbjct: 420 G--TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 71.8 bits (176), Expect = 2e-14
 Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 19/211 (9%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
             ++ GK  ++TGA  GIG   A   A  GA + ++  S E  + A   +  + G+    
Sbjct: 1   MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA-DELCGR-GHRCTA 58

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGT 173
           + + D+     + +   R   K   + +LVNNAGV  L +   ++ E  + +  +N+ G 
Sbjct: 59  V-VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGV 117

Query: 174 YTITESMVP-LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           + +T++++P ++ +   D R++ +SS       +T D+  + G       YA  K   V 
Sbjct: 118 WNVTKAVLPEMIARK--DGRIVMMSS-------VTGDMVADPGE----TAYALTKAAIVG 164

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAK 263
           LT+  +  Y + GI   ++ PG+  TP    
Sbjct: 165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 9/144 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHL 116
            ++ K  ++TGA+ GIG A AE LA+ GA + +V R+ EK E AL+A     G    V  
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARLPYPGRHRWVVA 60

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
           +L   +    + + A         ++VL+NNAGV     L     E  E   A+N+    
Sbjct: 61  DLTSEAGREAVLARAREM----GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPM 116

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            +T +++PLL +A P A V+ V S
Sbjct: 117 QLTRALLPLL-RAQPSAMVVNVGS 139

Length = 263

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 35/250 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHL 116
           R+E K  V+TGA+ GIG A+A  LA  GA V  V  ++   ET    I+S  G  +  H+
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETV-DKIKSNGGKAKAYHV 61

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-LENNRL--ITSEGFELNFAVNVLGT 173
              D+S   ++K FA+    +   V VL NNAGV     R+     + F+   AV++ GT
Sbjct: 62  ---DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGT 118

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + +T+ ++PL+ +      +I  SS     A L     + SG       Y   K   +  
Sbjct: 119 FLMTKMLLPLMMEQG--GSIINTSSFSGQAADL-----YRSG-------YNAAKGAVINF 164

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAK--------SMPSFNERFA-----GNLRTSE 280
           T+  +  Y   GI   ++ PG  ETP V K        +  +F E        G L   E
Sbjct: 165 TKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPE 224

Query: 281 EGADTVLWLA 290
           E A  V++LA
Sbjct: 225 EVAKLVVFLA 234

Length = 272

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++GK  +VTG + GIG A A  LA  GA V ++  S  + E     +  K G +     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK-TKAY 63

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
            CD+SS   ++    +       + +L+ NAG+  +   +  T E +     VN+ G + 
Sbjct: 64  KCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123

Query: 176 ITESMVPLLEKAAPDARVITVS 197
             ++   + +K    + +IT S
Sbjct: 124 CAQAAAKIFKKQGKGSLIITAS 145

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTGA  GIGYA A  LA  GA V  V R+ E+    ++ +R             D++   
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYG--YPFATYKLDVADSA 60

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVLGTYTITESM 180
            +     R   +  P+ VLVN AG+L   RL     ++ E ++  FAVN  G + +++++
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGIL---RLGAIDSLSDEDWQATFAVNTFGVFNVSQAV 117

Query: 181 VPLLEKAAPDARVITVSS 198
            P + K      ++TV S
Sbjct: 118 SPRM-KRRRSGAIVTVGS 134

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 70.9 bits (174), Expect = 6e-14
 Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 68/293 (23%)

Query: 65  VVTGANAGIGYATAEGL-----ASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE-- 117
           +VTGAN+G+G A  E L      +   T+ + CR+ ++ E A  A+ +   +  V  +  
Sbjct: 5   LVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDYV 64

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA----------------------------- 148
           L DLS++  + + A     +   +  L  NA                             
Sbjct: 65  LVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNPT 124

Query: 149 ------GVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
                 G+L      T +G    F  NV G Y +   + PLL ++   +++I  SS    
Sbjct: 125 YKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSLNAS 184

Query: 203 TAHLT-DDLEFNSGSFDGMEQYARNKR----VQVALTEKWSEMYKEKGIGFYSMHPGWAE 257
             + + +D++   G       Y+ +K     + +AL  K    + + G+  Y +HPG   
Sbjct: 185 PKYFSLEDIQHLKGP----APYSSSKYLVDLLSLALNRK----FNKLGVYSYVVHPGICT 236

Query: 258 TPGVAKSMPSFNE----------RFAGNLR---TSEEGADTVLWLALQPKEKL 297
           T      +P F            R  G+     +   GA+ ++WLALQ  E  
Sbjct: 237 TNLTYGILPPFTWTLALPLFYLLRRLGSPWHTISPYNGAEALVWLALQKPESQ 289

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 5/146 (3%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M + + GK  +VTGA  G+G A AE LA  GATV        +     +A+ +  G    
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG--RA 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
           H    DL+    ++ F +  +     +  LVNNAG+  +     +  + ++    VNV G
Sbjct: 59  HAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRG 118

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
           T+ +  + +P L + +   R++ ++S
Sbjct: 119 TFLMLRAALPHL-RDSGRGRIVNLAS 143

Length = 250

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 8e-14
 Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 29/246 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ G+  +VTGA +GIG ATA+  A  GA V +  R  E  E   +AI +  G       
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG-GRAFAR-- 58

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYT 175
             D+ S   +++  +  + +   + VLVNNAG      ++T+    ++    VNV G + 
Sbjct: 59  QGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFL 118

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
             +  +P++++    + V T S   +                 G   Y  +K    +LT 
Sbjct: 119 WAKYAIPIMQRQGGGSIVNTASQLAL-------------AGGRGRAAYVASKGAIASLTR 165

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSM----------PSFNERFA-GNLRTSEEGAD 284
             +  +   GI   ++ PG  +TP   +             +   R       T+EE A 
Sbjct: 166 AMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQ 225

Query: 285 TVLWLA 290
             L+LA
Sbjct: 226 AALFLA 231

Length = 252

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 12/141 (8%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSI 124
           +TG ++G G   A+ L S G TV   C +K   G   L  + S    + +     D++  
Sbjct: 5   ITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCS----DRLRTLQLDVTKP 60

Query: 125 TEIKSFAN--RFSLKNKPVHVLVNNAGVL---ENNRLITSEGFELNFAVNVLGTYTITES 179
            +IK  A   +  +  K +  LVNNAG+L    +  L+  + +     VN+ GT  +T++
Sbjct: 61  EQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKA 120

Query: 180 MVPLLEKAAPDARVITVSSGG 200
            +PLL +A    RV+ VSS G
Sbjct: 121 FLPLLRRA--KGRVVNVSSMG 139

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.0 bits (169), Expect = 2e-13
 Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 27/209 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
              R +GK  ++TG   GIG A AE     GA V ++  S E     L   R K G   +
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL---REK-GVFTI 56

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL-----ENNRLITSEGFELNFAVN 169
               CD+ +  ++K        +   V VLVNNAG++     E       E +     +N
Sbjct: 57  K---CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEE---FDEEKYNKMIKIN 110

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           + G    T   +PLL+ +   A V   S+ G+ TA             +G   YA  K  
Sbjct: 111 LNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA------------EGTTFYAITKAG 158

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + LT + +    + GI   ++ PGW ET
Sbjct: 159 IIILTRRLAFELGKYGIRVNAVAPGWVET 187

Length = 255

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 23/206 (11%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE-TALSAIRSKTGNENVHLELCD 120
           K  ++TG  +GIG ATA+ L  +GA V ++ R++  G    L AI  K          CD
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKV---KATFVQCD 57

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGT-YT 175
           ++S  ++ +   +   K   V +L+NNAG+L+             +E    VN+ G   T
Sbjct: 58  VTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINT 117

Query: 176 ITESMVPLLEKAAPDARVITV--SSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
              ++  + +       VI    S  G+Y A         S S  G+  + R+       
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVY---SASKHGVVGFTRSLAD---- 170

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETP 259
                 +  + G+   ++ PG+  TP
Sbjct: 171 -----LLEYKTGVRVNAICPGFTNTP 191

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 49/272 (18%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +G   VVTG  +G+G AT E L ++GA V ++      GET           +N      
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA------KLGDNCRFVPV 54

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV--------LENNRLITSEGFELNFAVNVL 171
           D++S  ++K+       K   + ++VN AG+         +  +  + E F+    VN++
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 172 GTYTITESMVPLLEKAAPDAR-----VITVSSGGMYTAHLTDDLEFNSGSFDG-MEQ--Y 223
           GT+ +       + K  PD       +I  +S                 +F+G + Q  Y
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTAS---------------VAAFEGQIGQAAY 159

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGN-------L 276
           + +K   V +T   +     +GI   ++ PG  +TP +   +P     F          L
Sbjct: 160 SASKGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTP-LLAGLPEKVRDFLAKQVPFPSRL 218

Query: 277 RTSEEGADTVLWLALQPKEKLVSGS-FYFDRA 307
               E A  V  +   P    ++G     D A
Sbjct: 219 GDPAEYAHLVQHIIENP---YLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 36/190 (18%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH---L 116
             K  +VTGA++G G  T   LA +G  V    R+ EK E  LS        +N+    L
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA-----GVLENNRLITSEGFELNFAVNVL 171
           ++ D +SI   +            + +LVNNA     G +E    I  E +   F  NV 
Sbjct: 62  DVTDQNSIHNFQLVLKEIG----RIDLLVNNAGYANGGFVEE---IPVEEYRKQFETNVF 114

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG--SFDGMEQYARNKRV 229
           G  ++T++++P + K     ++I +SS               SG   F G+  Y  +K  
Sbjct: 115 GAISVTQAVLPYMRKQK-SGKIINISS--------------ISGRVGFPGLSPYVSSKY- 158

Query: 230 QVALTEKWSE 239
             AL E +SE
Sbjct: 159 --AL-EGFSE 165

Length = 280

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 67.9 bits (166), Expect = 4e-13
 Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 25/253 (9%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++G+  ++TGA+ GIG A A      GA V +V R  +    A   +  +     VH  
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             D+S   + ++  +        +H+LVNNAG       I  T + +   F  N+   + 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFE 125

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++    PLL++ A  + ++ + S     + LT      SG+  GM + A  +     +T 
Sbjct: 126 LSRYAHPLLKQHA-SSAIVNIGS----VSGLTH---VRSGAPYGMTKAALLQ-----MTR 172

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL-RT-------SEEGADTVL 287
             +  + E GI   ++ P +  TP +     S  + +   + RT        EE A  V 
Sbjct: 173 NLAVEWAEDGIRVNAVAPWYIRTP-LTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVA 231

Query: 288 WLALQPKEKLVSG 300
           +L + P    ++G
Sbjct: 232 FLCM-PAASYITG 243

Length = 257

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 68.1 bits (167), Expect = 4e-13
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 34/245 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE--KGETALSAIRSKTGNENVH 115
           +++GK  ++TG ++GIG A A   A  GA V +    +E    E     I  + G + + 
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEE-GRKCLL 81

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLG 172
           +   DL   +  +        +   + +LVNNA      E+   IT+E  E  F  N+  
Sbjct: 82  IP-GDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
            + +T++ +P L+K    + +I  +S   Y  + HL D              YA  K   
Sbjct: 141 MFYLTKAALPHLKKG---SSIINTTSVTAYKGSPHLLD--------------YAATKGAI 183

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
           VA T   S    EKGI   ++ PG   TP +  S P            SE G+   +  A
Sbjct: 184 VAFTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEK--------VSEFGSQVPMGRA 235

Query: 291 LQPKE 295
            QP E
Sbjct: 236 GQPAE 240

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 25/219 (11%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
           D+   ++G   +VTG  +GIG A AE  A  GA V++   S    E AL+A  ++     
Sbjct: 4   DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAK 59

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV------LENNRLITSEGFELNFA 167
           V   + D++   +++   +    +   + VLVNNAG+      ++    IT E +E   A
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDE---ITPEQWEQTLA 116

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           VN+ G +    + VPLL+ +     +I +SS                  + G   YA +K
Sbjct: 117 VNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG------------YPGRTPYAASK 164

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
              V L +  +      GI   ++ PG    P + + + 
Sbjct: 165 WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIE 203

Length = 264

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 5e-13
 Identities = 34/95 (35%), Positives = 53/95 (55%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           MQ ++EG+  VVTG ++GIG AT E L   GA+V +  R +E+  +A + +R K     +
Sbjct: 2   MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
               CD+    ++ +FA     +   V +LVNNAG
Sbjct: 62  LAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 67.2 bits (165), Expect = 6e-13
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G   VVTGA  GIG A AE LA RG  V ++ R++EK +     I  K G E       D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVE-TKTIAAD 59

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELN--FAVNVLGTYT 175
            S+  +I        L+   + +LVNN G+   +    L T E  EL     VNV+ T  
Sbjct: 60  FSAGDDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPED-ELQDIINVNVMATLK 117

Query: 176 ITESMVPLLEKAAPDARVITVSSGG 200
           +T  ++P + K    A ++ +SS  
Sbjct: 118 MTRLILPGMVKRKKGA-IVNISSFA 141

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.0 bits (164), Expect = 6e-13
 Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 8/148 (5%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
             Q+ ++GKN ++TGA  GIG A A  LA  G  V ++ R++E  + A++      G + 
Sbjct: 1   MAQS-LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK-AVAEEVEAYGVK- 57

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVL 171
           V +   D+S   E+ +   +   +   + +L+NNAG+ +  + +      +E    VN++
Sbjct: 58  VVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLM 117

Query: 172 GTYTITESMVP-LLEKAAPDARVITVSS 198
           G Y  T +++P ++E+ + D  +I +SS
Sbjct: 118 GVYYATRAVLPSMIERQSGD--IINISS 143

Length = 239

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 7e-13
 Identities = 31/96 (32%), Positives = 41/96 (42%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R+ GK  +VTGA  GIG A A   A  GA V +        E A +AI        V
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
                D++    + +          P+ VLVNNAG+
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 28/221 (12%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN--VHLELCDLS 122
           +VTGA+ GIG A A  LA+RG  + +     +   T + A     G        ++ +LS
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGELS 64

Query: 123 SITEIKSFA-NRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTIT 177
               +   A   F      +  LVNNAG+    R     +T + F+   A+N+ G + +T
Sbjct: 65  DHEALLDQAWEDFG----RLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 178 ES----MVPLLE-KAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           ++    MV   +    P   +I V+S   Y          N G      +Y  +K     
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSP------NRG------EYCISKAGLSM 168

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            T   +    ++GI  + + PG   T   A     ++E  A
Sbjct: 169 ATRLLAYRLADEGIAVHEIRPGLIHTDMTAPVKEKYDELIA 209

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 6/147 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+EGK  +VTGA++GIG   A   A+ GA V +  R++E  E   + I            
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL---AGGRAIAV 58

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTY 174
             D+S   ++++       +   V +LVNNAG    N     +    F+  FAVNV   Y
Sbjct: 59  AADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPY 118

Query: 175 TITESMVPLLEKAAPDARVITVSSGGM 201
             T++ VP +      A V   S+ G+
Sbjct: 119 LWTQAAVPAMRGEGGGAIVNVASTAGL 145

Length = 251

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K C VTGA +GIG ATA  LA++GA +++  R  +     ++  R+  G    H  L D+
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRAL-DI 59

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLGTYTI 176
           S    + +FA      +  + V++N AG+     ++    +T E +     VN++G   +
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDR---LTHEQWRRMVDVNLMGPIHV 116

Query: 177 TESMVPLLEKAAPDARVITVSS 198
            E+ VP +  A     ++ VSS
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSS 138

Length = 272

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 38/132 (28%), Positives = 53/132 (40%), Gaps = 17/132 (12%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           I+GK  +VTGAN GIG A  E L +RGA  VY   R  E      S          + L+
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE------SVTDLGPRVVPLQLD 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
           + D +S+      A         V +LVNNAG+     L+     +        N  G  
Sbjct: 58  VTDPASVAAAAEAA-------SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110

Query: 175 TITESMVPLLEK 186
            +  +  P+L  
Sbjct: 111 AMARAFAPVLAA 122

Length = 238

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 17/203 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLEL 118
            GK  ++TG+++GIG  TA   A  GA + +  R  E+  ET  S +++    + + L +
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTI 176
            DL+         +    K   + +LVNNAG+L          E ++    +N+     +
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           T+  VP L K      ++ VSS     +     + +   S   ++Q+ R   +++A    
Sbjct: 122 TKLAVPHLIKT--KGEIVNVSSVAGGRSF--PGVLYYCISKAALDQFTRCTALELA---- 173

Query: 237 WSEMYKEKGIGFYSMHPGWAETP 259
                  KG+   S+ PG   T 
Sbjct: 174 ------PKGVRVNSVSPGVIVTG 190

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 65.3 bits (159), Expect = 3e-12
 Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 24/237 (10%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  +  +VTGA+ GIG   A   A  GATV ++ R++EK       I  + G +     L
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 119 CDLSSIT--EIKSFANRFSLKNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGT 173
            DL + T    +  A R ++    +  +++NAG+L +         + ++    VNV  T
Sbjct: 62  -DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 174 YTITESMVPLLEKAAPDARVI-TVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           + +T++++PLL   +    ++ T SS G            N G++  + ++A     QV 
Sbjct: 121 FMLTQALLPLL-LKSDAGSLVFTSSSVGRQGRA-------NWGAY-AVSKFATEGLXQVL 171

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWL 289
             E     Y+++ +    ++PG   T   A + P+ + +    L+T  +     LWL
Sbjct: 172 ADE-----YQQRNLRVNCINPGGTRTAMRASAFPTEDPQ---KLKTPADIMPLYLWL 220

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 65.1 bits (158), Expect = 3e-12
 Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 43/253 (16%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLE 117
           ++GK  +VTGA+ GIG A A  LA+ GA V +   R+K+  +  +  I S  G     L 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGG--KAFLI 61

Query: 118 LCDLSSITEIKSFANRFSLKNK--------PVHVLVNNAGV-----LENNRLITSEGFEL 164
             DL+SI  +K    +  LKN+         + +LVNNAG+     +EN    T E F+ 
Sbjct: 62  EADLNSIDGVKKLVEQ--LKNELQIRVGTSEIDILVNNAGIGTQGTIENT---TEEIFDE 116

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
             AVN+   + + +  +PLL     + RVI +SS            E   G F G   Y 
Sbjct: 117 IMAVNIKAPFFLIQQTLPLLRA---EGRVINISSA-----------EVRLG-FTGSIAYG 161

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-------SFNERFAGNLR 277
            +K     +T   ++   E+GI   ++ PG+ +T   AK +        + N    G + 
Sbjct: 162 LSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIG 221

Query: 278 TSEEGADTVLWLA 290
             E+ AD V +LA
Sbjct: 222 QVEDIADAVAFLA 234

Length = 254

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 16/173 (9%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGN-ENV 114
           + GK  +VTGA+ GIG A A+ LA  GA+V   Y    SK   E  ++ I +  G    V
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYA--SSKAAAEEVVAEIEAAGGKAIAV 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
             ++ D S +  +   A +       V +LVNNAGV+    +   + E F+  F VN  G
Sbjct: 59  QADVSDPSQVARLFDAAEKAF---GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKG 115

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
            + + +     L       R+I +SS    TA  T +    +GS   +E + R
Sbjct: 116 AFFVLQEAAKRLR---DGGRIINISSSL--TAAYTPNYGAYAGSKAAVEAFTR 163

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 63.3 bits (155), Expect = 4e-12
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
              ++TG   G+G A A  LA+ GA  + +V R       A      +     V +  CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           ++    + +          P+  +V+NAGVL++  L  +T E FE   A  V G + + E
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 179 SMVPLLEKAAPDARVITVSSGG 200
               L          +  SS  
Sbjct: 121 LTRDL-----DLGAFVLFSSVA 137

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 38/265 (14%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENV 114
             R++GK  +VTG   G+G A A   A RGA   ++C R+ EKGE A +A     G +  
Sbjct: 1   MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEALGAK-A 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
                DLS + + +            +  LVN AG+ +   ++  + E F+ +FAVNV  
Sbjct: 59  VFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRA 118

Query: 173 TY-TITESMVPLLEKAAPDARV--ITVSS-GGM-----YTAHLTDDLEFNSGSFDGMEQ- 222
            +  + E++  +  + A    V   ++S+ GG      Y A        + G+   + + 
Sbjct: 119 PFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA--------SKGALATLTRN 170

Query: 223 --YA-RNKRVQV-ALTEKWSEMYKEKGI--GFYSMHPGWAETPGVAKSMPSFNERFAGNL 276
             YA    R++V  L   W     E  I   F+     W E    A + P       G L
Sbjct: 171 AAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLE--KAAATQP------FGRL 222

Query: 277 RTSEEGADTVLWLALQPKEKLVSGS 301
              +E A  V +L L  +  L++GS
Sbjct: 223 LDPDEVARAVAFL-LSDESGLMTGS 246

Length = 260

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 4e-12
 Identities = 70/255 (27%), Positives = 102/255 (40%), Gaps = 33/255 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M     GK+ +VTGA++GIG A A  LA RGA V    R+      AL  +  +TG E +
Sbjct: 3   MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARN----AAALDRLAGETGCEPL 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLG 172
            L++ D ++I    + A  F         LVN AG   LE+   +T+EGF+   AVN  G
Sbjct: 59  RLDVGDDAAIRAALAAAGAF-------DGLVNCAGIASLESALDMTAEGFDRVMAVNARG 111

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
              +   +   +  A     ++ VSS          D      S   ++   R       
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQAALVG--LPDHLAYCASKAALDAITR------V 163

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVA-------KSMPSFNERFAGNLRTSEEGADT 285
           L  +        GI   S++P    TP  A       KS P       G     ++ A  
Sbjct: 164 LCVELG----PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAP 219

Query: 286 VLWLALQPKEKLVSG 300
           +L+L L     +VSG
Sbjct: 220 ILFL-LSDAASMVSG 233

Length = 245

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 75/280 (26%), Positives = 118/280 (42%), Gaps = 51/280 (18%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-EN 113
           M   ++ K  +VTG  +GIG A +  LA  GA   +  RS    E A   +R+     E 
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFA-EELRALQPRAEF 59

Query: 114 VHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFA 167
           V ++L D +   + ++    +F      +  LVNNAGV     LE       E F  +  
Sbjct: 60  VQVDLTDDAQCRDAVEQTVAKFG----RIDGLVNNAGVNDGVGLEA----GREAFVASLE 111

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
            N++  Y +    +P L KA+  A ++ +SS    TA LT       G   G   YA  K
Sbjct: 112 RNLIHYYVMAHYCLPHL-KASRGA-IVNISSK---TA-LT-----GQGGTSG---YAAAK 157

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER------------FAGN 275
             Q+ALT +W+    + G+   ++ P    TP     + +F++                 
Sbjct: 158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHR 217

Query: 276 LRTSEEGADTVLWLALQPKEKLVSGSFYF--------DRA 307
           + T+EE ADT ++L L  +    +G + F        DRA
Sbjct: 218 MTTAEEIADTAVFL-LSERSSHTTGQWLFVDGGYVHLDRA 256

Length = 258

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 8e-12
 Identities = 30/126 (23%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TGA+ GIG+A A+  A  GAT+     ++E  +  L+A R        H  +
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYV 65

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
           CD++    +++  ++   +   + +LVNNAG+++   ++  ++E F     +++   + +
Sbjct: 66  CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIV 125

Query: 177 TESMVP 182
           +++++P
Sbjct: 126 SKAVIP 131

Length = 265

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +  G   ++TG  +GIG A A+     G TV +  R++E+   A      K  N  +H E
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEA------KAENPEIHTE 55

Query: 118 LCDLSSITEIKSFANRFSLKNKP-VHVLVNNAGVLENNRL----ITSEGFELNFAVNVLG 172
           +CD++     +        K  P ++VL+NNAG+  N  L       +  E   A N+L 
Sbjct: 56  VCDVADRDSRRELVEWL-KKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 173 TYTITESMVPLLEKAAPDARVITVSSG 199
              +T  ++P L    P+A +I VSSG
Sbjct: 115 PIRLTALLLPHL-LRQPEATIINVSSG 140

Length = 245

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 19/133 (14%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
                 GK   VTGA  GIGYA A      GA V                      +   
Sbjct: 2   NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKV-----------IGFDQAFLTQEDYPF 50

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVN 169
              + D+S    +     R   +  P+ VLVN AG+L   R+     ++ E ++  FAVN
Sbjct: 51  ATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGIL---RMGATDSLSDEDWQQTFAVN 107

Query: 170 VLGTYTITESMVP 182
             G + +  +++P
Sbjct: 108 AGGAFNLFRAVMP 120

Length = 252

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.8 bits (155), Expect = 1e-11
 Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 39/273 (14%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M + + GK  VVTGA +GIG   A  LA  GA V +   +++        I  K G + +
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN-KAGGKAI 59

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVN 169
            + + D+++   + +  ++ + +   V +LV+NAG+   N +   E +         A++
Sbjct: 60  GVAM-DVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPI---ENYSFADWKKMQAIH 115

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           V G +  T++ +  + K      VI + S           +  +  S      Y   K  
Sbjct: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGS-----------VHSHEAS-PLKSAYVTAKHG 163

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA---------------- 273
            + L    ++   +  +  + + PG+  TP V K +P   +                   
Sbjct: 164 LLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTV 223

Query: 274 -GNLRTSEEGADTVLWLALQPKEKLVSGSFYFD 305
            G   T E+ A TVL+L+  P   L   SF   
Sbjct: 224 DGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVS 256

Length = 262

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 30/245 (12%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+EGK  +VTGA +G G   A   A  GA V +   + +  E   + I      E     
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI-----GEAAIAI 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTY 174
             D++   ++++       K   + +LVNNAG+   N+    +  E F+  FAVNV   Y
Sbjct: 57  QADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              +++VP +E+      +   S+ G+                 G+  Y  +K   V  T
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPR-------------PGLTWYNASKGWVVTAT 163

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFNERFA-----GNLRTSEEGADT 285
           +  +     + I    + P   ETP ++  M    P    +F      G L T ++ A+ 
Sbjct: 164 KAMAVELAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANA 223

Query: 286 VLWLA 290
            L+LA
Sbjct: 224 ALYLA 228

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 26/223 (11%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE--LCDLS 122
           +VTG   GIG   A  LA+ G  + +  R  ++   A        G E +     + DLS
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLS 65

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTITE 178
           +   +   A         +  LVNNAGV    R     +T E F+   A+N+ G + +T+
Sbjct: 66  AHEAMLDAAQAAW---GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 179 S----MVPLLEKAAPDAR-VITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           +    M+   E      R ++ VSS                 S +  E Y  +K      
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-----------SPNRGE-YCISKAGLSMA 170

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL 276
            + ++    E+GIG Y + PG  +T   A     ++   A  L
Sbjct: 171 AQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGL 213

Length = 256

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 15/155 (9%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR---SKTGNEN 113
             + GK  ++TGA++GIG A AE  A RGATV  V R     E  L A+    ++ G + 
Sbjct: 36  VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVAR----REDLLDAVADRITRAGGD- 90

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS----EGFELNFAVN 169
                CDLS +  + +       +   V +L+NNAG      L  S       E    +N
Sbjct: 91  AMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLN 150

Query: 170 VLGTYTITESMVP-LLEKAAPDARVITVSSGGMYT 203
                 +   + P +LE+   D  +I V++ G+ +
Sbjct: 151 YYAPLRLIRGLAPGMLERG--DGHIINVATWGVLS 183

Length = 293

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 45/252 (17%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG  +GIG  TA    + GA V +  R       +L A R++ G   + + 
Sbjct: 3   RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRD----PASLEAARAELGESALVIR 58

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLG 172
             D   +   K+ A   +     +  +  NAGV     LE+        F+ +F  NV G
Sbjct: 59  -ADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLED---WDEAMFDRSFNTNVKG 114

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRV 229
            Y + ++++PLL   A      ++   G   AH+            GM     YA +K  
Sbjct: 115 PYFLIQALLPLLANPA------SIVLNGSINAHI------------GMPNSSVYAASKAA 156

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SMPSFNERF-----AGNLRT 278
            ++L +  S     +GI   ++ PG  +TP   K      ++ +   +       G   T
Sbjct: 157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGT 216

Query: 279 SEEGADTVLWLA 290
            EE A  VL+LA
Sbjct: 217 PEEIAKAVLYLA 228

Length = 249

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 60/245 (24%), Positives = 88/245 (35%), Gaps = 32/245 (13%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K   +TGA +GIG  TA   A  G  V +    ++     L+A+ ++ G ENV     D+
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDED----GLAALAAELGAENVVAGALDV 56

Query: 122 SSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           +      +    F+      +  L NNAGV        +     +    +NV G      
Sbjct: 57  TDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAY 116

Query: 179 SMVPLLEKAAPDARVITV-SSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           + +P L KA P ARVI   SS  +Y                G      Y+  K     LT
Sbjct: 117 AALPYL-KATPGARVINTASSSAIY----------------GQPDLAVYSATKFAVRGLT 159

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--TSEEGADTVLWLALQ 292
           E     +   GI    + P + +TP +     +      G  R     + A  V W A  
Sbjct: 160 EALDVEWARHGIRVADVWPWFVDTP-ILTKGETGAAPKKGLGRVLPVSDVAKVV-WAAAH 217

Query: 293 PKEKL 297
              KL
Sbjct: 218 GVPKL 222

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 41/216 (18%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  +VTG ++GIG A  + L + GA V         G+           +EN     
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVP 55

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSE-----GFELN------ 165
            D+SS  E+         K   +  LVNNAG+   N  RL+  E      +ELN      
Sbjct: 56  TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI---NIPRLLVDEKDPAGKYELNEAAFDK 112

Query: 166 -FAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
            F +N  G + +++++   + K   D  ++ +SS           LE   GS +G   YA
Sbjct: 113 MFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSS--------EAGLE---GS-EGQSCYA 159

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG 260
             K    + T  W++   +  I    + PG  E  G
Sbjct: 160 ATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATG 195

Length = 266

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 61.4 bits (150), Expect = 6e-11
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 14/156 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK   +TG   GIG A A+  A  GA+V +  R  E  E A   I S TG    H   C
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR-AHPIQC 60

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVLGTY 174
           D+     +++  +    +   + +L+NNA     N L     ++  GF+    +++ GT+
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAA---GNFLAPAESLSPNGFKTVIDIDLNGTF 117

Query: 175 TITESMVPLLEKAAPDARVITVS-----SGGMYTAH 205
             T+++   L +A     ++ +S     +G  +  H
Sbjct: 118 NTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVH 153

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 33/246 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++ K  V+TG   G+G A AE LA +GA + ++  ++EK E A++   +      V   
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGT--EVRGY 59

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS-----------EGFELNF 166
             +++   ++++   + +     ++ L+NNAG+L +  L+ +           E F+   
Sbjct: 60  AANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVI 119

Query: 167 AVNVLGTYTIT-ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
            VN+ G +    E+   ++E +     +I +SS                G+  G   Y+ 
Sbjct: 120 DVNLTGVFLCGREAAAKMIE-SGSKGVIINISSIARA------------GNM-GQTNYSA 165

Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSE 280
           +K    A+T  W++     GI   ++ PG  ET   A   P   ER       G L   E
Sbjct: 166 SKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPE 225

Query: 281 EGADTV 286
           E A TV
Sbjct: 226 EIAHTV 231

Length = 253

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.0 bits (149), Expect = 9e-11
 Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 22/251 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + G+  +VTGA  G+G A A  LA  GA V +  RS E+    L       G       
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-RRAQAV 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++    +++       +   + +LVNNAG+ E+  L  ++ + ++    VN+ G + 
Sbjct: 62  QADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +  ++VP + K     R++ +SS                  + G   YA  K   V LT+
Sbjct: 122 LLRAVVPPMRKQRG-GRIVNISSVAG------------LPGWPGRSNYAAAKAGLVGLTK 168

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----AGNLRTSEEGADTVLWLA 290
             +    E GI    + PG  +T     ++    E        G   T E+ A  V +L 
Sbjct: 169 ALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLC 228

Query: 291 LQPKEKLVSGS 301
                  ++G 
Sbjct: 229 -SDASDYITGQ 238

Length = 249

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 67/252 (26%), Positives = 101/252 (40%), Gaps = 44/252 (17%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K+  +TGA +GIG ATA   A+ G  V     +    E  L+A+ ++ G  N      D+
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDIN----EAGLAALAAELGAGNAWTGALDV 57

Query: 122 SSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           +        +  FA   +     + VL NNAG+L       I  E  +    +NV G   
Sbjct: 58  TDRAAWDAALADFA---AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLN 114

Query: 176 ITESMVPLLEKAAPDARVITVSSG-GMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQV 231
              + +P L KA P ARVI  SS   +Y                G      Y+  K    
Sbjct: 115 GAHAALPYL-KATPGARVINTSSASAIY----------------GQPGLAVYSATKFAVR 157

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------TSEEGADT 285
            LTE     ++  GI    + P + +T  +  +    NE  AG+ +      T E+ A+ 
Sbjct: 158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS---NEVDAGSTKRLGVRLTPEDVAEA 214

Query: 286 VLWLALQPKEKL 297
           V W A+Q   +L
Sbjct: 215 V-WAAVQHPTRL 225

Length = 260

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
            R++GK  ++TGA +GIG A AE   + GA V +      +   A   I        V L
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAA--IAVSL 59

Query: 117 ELCDLSSITEIKSFA-NRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
           ++    SI  I + A  RF      + +L NNA + +   +  I+ + ++  FAVNV G 
Sbjct: 60  DVTRQDSIDRIVAAAVERFG----GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGL 115

Query: 174 Y 174
           +
Sbjct: 116 F 116

Length = 257

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ +  VVTGA  G+G A A   A  GA V +  R++ + +     IR+  G    H+ 
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-AGRR-AHVV 64

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
             DL+        A +       + ++VNN G    N L+++   +L   F  NV   + 
Sbjct: 65  AADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHA 124

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +T + VPL+ + +    VI +SS
Sbjct: 125 LTVAAVPLMLEHSGGGSVINISS 147

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  +VTGA++GIG ATA  LA+ GA V +  R  ++ E     + ++ G     +  
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGG--KALVLE 58

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTI 176
            D++   ++ +   R       + +LVNNAG++    +  ++  +       N+LG    
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 177 TESMVPLLEKAAPDARVITVSS----GGMYTAHLTDDLEFNSGSF-DGMEQYARNKRVQV 231
           T + +P          ++ +SS      +  + + +  +F   +F +G+ Q    + V+V
Sbjct: 119 THAALP-HHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 232 ALTE 235
            + E
Sbjct: 178 VVIE 181

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 61.8 bits (151), Expect = 2e-10
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL- 118
            GK  +VTGA  GIG ATA+ LA+ GA V +        E A  A  ++ G  +  L + 
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLD----EEAAEAAAAELGGPDRALGVA 476

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
           CD++    +++     +L    V ++V+NAG+  +  +   + E +  +F VN  G + +
Sbjct: 477 CDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536

Query: 177 TESMVPLLEKAAPDARVITVSS 198
               V +++       ++ ++S
Sbjct: 537 AREAVRIMKAQGLGGSIVFIAS 558

Length = 681

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 61/264 (23%), Positives = 95/264 (35%), Gaps = 46/264 (17%)

Query: 64  CVVTGANAGIGYATAEGLASRGAT--VYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
            ++TGA+ GIG A AE L  RG+   V ++ RS+E                 V     DL
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEEP---LQELKEELRPGLRVTTVKADL 58

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTITE 178
           S    ++         +    +L+NNAG L     I     +  +  F +N+     +T 
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY-----ARNKRVQVAL 233
           +++   +K      V+ VSSG                 F G   Y     AR+   +V  
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNP------------FKGWGLYCSSKAARDMFFRVLA 166

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNERFA-----GNLRTSEEGA 283
            E       E  +   S  PG  +T    +       P    RF      G L   E+ A
Sbjct: 167 AE-------EPDVRVLSYAPGVVDTDMQREIRETSADPETRSRFRSLKEKGELLDPEQSA 219

Query: 284 DTVLWLALQPKEKLVSGSF--YFD 305
           + +  L  + K +  SG+   Y+D
Sbjct: 220 EKLANLLEKDKFE--SGAHVDYYD 241

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 21/147 (14%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH-LELCDLSS 123
           +VTGA++GIG ATA  LA++G TVY   R  +K E  L++         VH L L D++ 
Sbjct: 7   LVTGASSGIGKATARRLAAQGYTVYGAARRVDKME-DLAS-------LGVHPLSL-DVTD 57

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNA-----GVLENNRLITSEGFELNFAVNVLGTYTITE 178
              IK+  +    +   + VLVNNA     G +E+  +   E     F VN+ G   +T+
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPI--DEA-RRQFEVNLFGAARLTQ 114

Query: 179 SMVPLLEKAAPDARVITVSS--GGMYT 203
            ++P + +A    R+I +SS  G +YT
Sbjct: 115 LVLPHM-RAQRSGRIINISSMGGKIYT 140

Length = 273

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 36/261 (13%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D    + GK  +VTGA  GIG A AE LA  GA V  VC        AL+A+ ++ G 
Sbjct: 201 PADWDRPLAGKVALVTGAARGIGAAIAEVLARDGAHV--VCLDVPAAGEALAAVANRVGG 258

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVN 169
             + L++    +   I         ++  + ++V+NAG+  +  L  +    ++   AVN
Sbjct: 259 TALALDITAPDAPARIAEHLAE---RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVN 315

Query: 170 VLGTYTITESMVPLLEKAA--PDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           +L    ITE+   LL   A     R++ VSS  G+            +G+  G   YA +
Sbjct: 316 LLAPLRITEA---LLAAGALGDGGRIVGVSSISGI------------AGNR-GQTNYAAS 359

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTS-EEG--- 282
           K   + L +  + +  E+GI   ++ PG+ ET   A  +P F  R AG    S ++G   
Sbjct: 360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA-IP-FATREAGRRMNSLQQGGLP 417

Query: 283 ---ADTVLWLALQPKEKLVSG 300
              A+T+ WLA  P    V+G
Sbjct: 418 VDVAETIAWLA-SPASGGVTG 437

Length = 450

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 59.5 bits (144), Expect = 3e-10
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 16/208 (7%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TG  +G+G ATA  LA  GA + +V  ++E  E A +A+     +  V L   D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTITESMV 181
            +++++ +    +   +    NNAG+     L     ++ F+   ++N+ G +   E ++
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
            ++ +      V T S GG+             G  +    YA  K   V LT   +  Y
Sbjct: 127 KVMREQGSGMIVNTASVGGI------------RGVGNQS-GYAAAKHGVVGLTRNSAVEY 173

Query: 242 KEKGIGFYSMHPGWAETPGVAKSMPSFN 269
            + GI   ++ PG   TP V  S+    
Sbjct: 174 GQYGIRINAIAPGAILTPMVEGSLKQLG 201

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 9/97 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NEN 113
           M   + GK  ++TGA+ GIG A AE  A+ G  +++V R  +  E   + +R+  G +  
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVA 60

Query: 114 VH-LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
           VH L+L    +  ++ + A         + +LVNNAG
Sbjct: 61  VHALDLSSPEAREQLAAEAG-------DIDILVNNAG 90

Length = 259

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 42/247 (17%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  ++T A  GIG A A   A  GA V     ++EK +         T      L++ 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITT----RVLDVT 56

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFA--VNVLGTYTIT 177
           D   +  +     R         VL N AG + +  ++  E  + +FA  +NV   Y + 
Sbjct: 57  DKEQVAALAKEEGRID-------VLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMI 109

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           ++++P +     D  +I +SS               + S  G+     Y+  K   + LT
Sbjct: 110 KAVLPKMLARK-DGSIINMSSV--------------ASSIKGVPNRFVYSTTKAAVIGLT 154

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGV---AKSMPSFNERFA--------GNLRTSEEGA 283
           +  +  + ++GI   ++ PG  +TP +    ++ P   E           G L T EE A
Sbjct: 155 KSVAADFAQQGIRCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVA 214

Query: 284 DTVLWLA 290
              ++LA
Sbjct: 215 ALAVYLA 221

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 59.1 bits (143), Expect = 5e-10
 Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 35/229 (15%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG A A  L   G  V++  R +E   T +  +R            CD+ S+
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA--GVEADGRTCDVRSV 64

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
            EI++       +  P+ VLVNNAG         +  E +      N+ G + +T+ ++ 
Sbjct: 65  PEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLK 124

Query: 183 ---LLEKAAPDARVITVSSGG-----MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              +LE+     R+I ++S G     ++ A                  Y+ +K   V  T
Sbjct: 125 AGGMLER--GTGRIINIASTGGKQGVVHAA-----------------PYSASKHGVVGFT 165

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGA 283
           +         GI   ++ PG+ ETP  A    S  E +A     S E A
Sbjct: 166 KALGLELARTGITVNAVCPGFVETPMAA----SVREHYADIWEVSTEEA 210

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 10/140 (7%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTGA+ GIG ATA  L + G  V +  R + +   A +        E V     D+
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQEL-----EGVLGLAGDV 55

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGT-YTITE 178
               +++   +        +  LVNNAGV  ++    +T E + L    N+ G  Y I +
Sbjct: 56  RDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHK 115

Query: 179 SMVPLLEKAAPDARVITVSS 198
           +   LL +      ++ V S
Sbjct: 116 AAPALLRRGG--GTIVNVGS 133

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 26/243 (10%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  +VTGA++GIG A A  LA+ GA V +  RSKE     +       G + + ++ 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQ- 59

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYT 175
            D+S   ++ +       +   + +LVNNAG L+ +     +T E +     VN+ G + 
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAG-LQGDASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
                +    K+    ++I +SS                  + G   YA +K     +T+
Sbjct: 119 CAREAIKRFRKSKIKGKIINMSSVHEKIP------------WPGHVNYAASKGGVKMMTK 166

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--------TSEEGADTVL 287
             ++ Y  KGI   ++ PG   TP +        E+ A  L           EE A    
Sbjct: 167 TLAQEYAPKGIRVNAIAPGAINTP-INAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAA 225

Query: 288 WLA 290
           WLA
Sbjct: 226 WLA 228

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 6e-10
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTG++ GIGYA AEGLA  GA V +  R   K   A  +++      + H   
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG--QGLSAHALA 65

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
            D++    +++  + F  +  P+ +LVNNAG
Sbjct: 66  FDVTDHDAVRAAIDAFEAEIGPIDILVNNAG 96

Length = 255

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 6e-10
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TG + G+G A A  L  +G  V  + R++ K  T L+       N N+     DL  +
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY----NSNLTFHSLDLQDV 60

Query: 125 TEIKSFANRFS----LKN-KPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTI 176
            E+++  N         N   +H L+NNAG++   + I    SE    N  +N+L    +
Sbjct: 61  HELETNFNEILSSIQEDNVSSIH-LINNAGMVAPIKPIEKAESEELITNVHLNLLAPMIL 119

Query: 177 TESMVPLLEKAAPDARVITVSSG 199
           T + +   +    D RVI +SSG
Sbjct: 120 TSTFMKHTKDWKVDKRVINISSG 142

Length = 251

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 56/258 (21%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  ++TGA++GIG ATA   A  GA + +  R  E+ +     + +K   + + L+L D+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQL-DV 59

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAG-VLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           S    I++       + + + +LVNNAG  L  +       E +E     NV G   +T 
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 179 SMVPLLEKAAPDARVITVSS---------GGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
            ++P++  A     +I + S         G +Y A         + +   + Q++ N R 
Sbjct: 120 LILPIM-IARNQGHIINLGSIAGRYPYAGGNVYCA---------TKAA--VRQFSLNLRK 167

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-NERFAGNLR----------- 277
            +  T          GI   ++ PG  ET         F   RF G+             
Sbjct: 168 DLIGT----------GIRVTNIEPGLVET--------EFSLVRFHGDKEKADKVYEGVEP 209

Query: 278 -TSEEGADTVLWLALQPK 294
            T E+ A+T+LW+A +P 
Sbjct: 210 LTPEDIAETILWVASRPA 227

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 8e-10
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TGA++GIG   A  LA  GA + +  R +E+ E   S      G  + H+  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL-GAPSPHVVP 59

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            D+S + + +            + +L+NNAG+   +     + +       VN  G   +
Sbjct: 60  LDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVAL 119

Query: 177 TESMVPLLEKAAPDARVITVSS 198
           T++ +P L + +    ++ VSS
Sbjct: 120 TKAALPHLIERS-QGSIVVVSS 140

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 43/218 (19%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK  VVTGA  GIG   A  L +RGA + +V   +      L+A+ ++ G ++  L 
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEA----ELAALAAELGGDDRVLT 61

Query: 118 L----CDLSSITEIKSFA-NRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNV 170
           +     DL+++      A  RF      + V+V NAG+     +     + F     VN+
Sbjct: 62  VVADVTDLAAMQAAAEEAVERFG----GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNL 117

Query: 171 LGTYTITESMVP-LLEKAAPDARVITVSS------GGMYTAHLTDDLEFNSGSFDGMEQY 223
           LG +    + +P L+E+      V+ VSS           A+          S  G+E +
Sbjct: 118 LGVFHTVRATLPALIERR---GYVLQVSSLAAFAAAPGMAAYCA--------SKAGVEAF 166

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV 261
           A   R++VA            G+   S +  W +T  V
Sbjct: 167 ANALRLEVA----------HHGVTVGSAYLSWIDTDLV 194

Length = 296

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.5 bits (144), Expect = 8e-10
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 21/207 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           + +  +VTGA  GIG A  +  A  G  V +  R+ E             G ++  L   
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVE----RARERADSLGPDHHALA-M 58

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT----SEGFELNFAVNVLGTYT 175
           D+S   +I+    +   +   + VLVNNAGV +     T     E F    A+N+ G Y 
Sbjct: 59  DVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYL 118

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +    + L+ +    A ++ V+SG    A                  Y+ +K   ++LT 
Sbjct: 119 VAREALRLMIEQGHGAAIVNVASGAGLVAL------------PKRTAYSASKAAVISLTR 166

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVA 262
             +  +  KGI   ++ PG+  T  VA
Sbjct: 167 SLACEWAAKGIRVNAVLPGYVRTQMVA 193

Length = 520

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 24/208 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHL 116
           R++ +  +VTG ++GIG A A   A  GA V +     +E+    +  I  + G + V L
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLGT 173
              DLS     +S  +        + ++   AG    + +   +TSE F+  FA+NV   
Sbjct: 106 P-GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFAL 164

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           + +T+  +PLL K    A +IT SS   Y  + HL D              YA  K   +
Sbjct: 165 FWLTQEAIPLLPKG---ASIITTSSIQAYQPSPHLLD--------------YAATKAAIL 207

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETP 259
             +   ++   EKGI    + PG   T 
Sbjct: 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTA 235

Length = 294

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA++G+G   A+ LA  GA V +  R  E+ +   + I ++ G  +V + L
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV-VSL 65

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            D++    IK+       +   + +LVNN+GV    +L  +T   F+  F  N  G + +
Sbjct: 66  -DVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFV 124

Query: 177 TESMVPLL---EKAAPD----ARVITVSS 198
            + +   +    K A +     R+I ++S
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIAS 153

Length = 258

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 39/242 (16%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTGA  GIG A A  L   GATV  +             +R         L   D++   
Sbjct: 3   VTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLR---------LTPLDVADAA 53

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLE--NNRLITSEGFELNFAVNVLGTYTITESMVPL 183
            ++   +R   ++ P+  LVN AGVL       +++E +E  FAVNV G + + +++ P 
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPH 113

Query: 184 LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE 243
           + K      ++TV+S   +   +             M  Y  +K    +L++        
Sbjct: 114 M-KDRRTGAIVTVASNAAHVPRI------------SMAAYGASKAALASLSKCLGLELAP 160

Query: 244 KGIGFYSMHPG----------WAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLW 288
            G+    + PG          W +  G A+ +    E+F      G +    + A+ VL+
Sbjct: 161 YGVRCNVVSPGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLF 220

Query: 289 LA 290
           LA
Sbjct: 221 LA 222

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 52/215 (24%), Positives = 76/215 (35%), Gaps = 45/215 (20%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK   +TG   GIG ATA  LA+ GA V +    +   +   + +    G       
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVG-----GP 56

Query: 118 LCDLSSITEIKSFANRF----SLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVL 171
           L     +T+  SFA  F         P+ VLVNNAGV+     +            VNV 
Sbjct: 57  L----DVTDPASFA-AFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY 111

Query: 172 GTYTITESMVPLLEKAAPD--AR----VITVSS--GGMYTAHLTDDLEFNSGSFDGMEQY 223
           G    ++        AAP    R    V+ V+S  G +                 GM  Y
Sbjct: 112 GVILGSKL-------AAPRMVPRGRGHVVNVASLAGKIPVP--------------GMATY 150

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
             +K   V  T+      +  G+    + P +  T
Sbjct: 151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185

Length = 273

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 7/137 (5%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +V GA++GIG ATA  LA+ G  V +  R  EK E  +  IR+  G E V   L D++  
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPL-DVTDP 71

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
             +KSF  +       + VLV+ AG     +L  I++E FE    ++++G   +  +++P
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 183 -LLEKAAPDARVITVSS 198
            ++E+   D  +I V S
Sbjct: 132 GMIERRRGD--LIFVGS 146

Length = 274

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 11/146 (7%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++GK  +VTGA +GIG   A  LA  GA V +   + E    A  A++ K G + + + 
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ-KAGGKAIGVA 59

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLG 172
             D++    I +  +        V +LVNNAG+     +E+     +E ++   A+ + G
Sbjct: 60  -MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIED---FPTEKWKKMIAIMLDG 115

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            +  T++ +P++ KA    R+I ++S
Sbjct: 116 AFLTTKAALPIM-KAQGGGRIINMAS 140

Length = 258

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTGA+ GIG   A  L   GATVY+  R+        +      G + + +  CD
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV-RCD 61

Query: 121 LSSITEIKSFANRF-SLKNKPVHVLVNNA--GVLENNRLITSEGFELN-------FAVNV 170
            S   E+++   R    +   + +LVNNA   V      +    +E           V +
Sbjct: 62  HSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGL 121

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGG 200
              Y  +    PL+ KA     VI  S+GG
Sbjct: 122 RAHYACSVYAAPLMVKAGKGLIVIISSTGG 151

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA  GIG A A    + G  V  +         AL+A     G+       CDL+  
Sbjct: 6   LVTGAAGGIGQALARRFLAAGDRVLALDIDAA----ALAAFADALGDARFVPVACDLTDA 61

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
             + +     + +  PV VLV NAG      L   T   +  + A+N+   Y   E+++ 
Sbjct: 62  ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLE 121

Query: 183 LLEKAAPDARVITVSSGGM 201
            + K +  A V   S  GM
Sbjct: 122 GMLKRSRGAVVNIGSVNGM 140

Length = 257

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 54.8 bits (132), Expect = 5e-09
 Identities = 54/238 (22%), Positives = 79/238 (33%), Gaps = 68/238 (28%)

Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
           +VTG + GIG A A  LASRG+  V +V R                              
Sbjct: 2   LVTGGSGGIGGAIARWLASRGSPKVLVVSRRD---------------------------- 33

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITESMV 181
                              V+V+NA +L++ RLI       E     NV+GT  + E+  
Sbjct: 34  -------------------VVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAR 74

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
            L++      R I +SS                G       YA +K     L ++W+   
Sbjct: 75  ELMKAKRL-GRFILISSVAGLF-----GAPGLGG-------YAASKAALDGLAQQWASEG 121

Query: 242 KEKGIGFYSMHPGWAETPGVAK-----SMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
              G+   ++  G     G+AK          N R        EE A  +L    +PK
Sbjct: 122 WGNGLPATAVACGTWAGSGMAKGPVAPEEILGNRRHGVRTMPPEEVARALLNALDRPK 179

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 55.9 bits (135), Expect = 5e-09
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  +VTG   G+G A A  L + GA V +     E+G+ A + +         HL 
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAA--RFFHL- 58

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++      +  +        + VLVNNAG+L    +   T E +     +N+ G + 
Sbjct: 59  --DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFL 116

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
            T +++P + K A    +I +SS
Sbjct: 117 GTRAVIPPM-KEAGGGSIINMSS 138

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 55.2 bits (133), Expect = 8e-09
 Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 43/271 (15%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM--VCR-----------SKEKGETALSAI 105
           +EGK   +TGA  G G A A  LA+ GA +    +C            ++E  +     +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 106 RSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFE 163
            +  G + +  +  D+  + E+++       +   + V+V NAGVL   R   ++ E ++
Sbjct: 61  EA-LGRKVLARKA-DVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWD 118

Query: 164 LNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY 223
               +N+ G +   +++VP + +      +I  SS     A L         +  G+  Y
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSS----VAGLK--------ALPGLAHY 166

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------PSFNERFA-- 273
           A  K   V LT+  +    E GI   S+HP   +TP +A           P     F   
Sbjct: 167 AAAKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPA 226

Query: 274 ---GNLRTSEEGADTVLWLALQPKEKLVSGS 301
                    E+ AD VLWLA   + + ++G 
Sbjct: 227 LPVSGFVPPEDVADAVLWLA-SDESRYITGH 256

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 55.3 bits (133), Expect = 8e-09
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 23/217 (10%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G+  V+TG  +GIG AT    A RGA V +    K     A++ +R++    +VH  +CD
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCD 63

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           +    E+   A+        V V+ +NAG++    +  +T + +     V++ G+    E
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123

Query: 179 SMVP-LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           + +P LLE+      V T S  G+           N+    G+  Y   K   V L E  
Sbjct: 124 AFLPRLLEQGTGGHVVFTASFAGLVP---------NA----GLGAYGVAKYGVVGLAETL 170

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAG 274
           +      GIG   + P   ET  VA S     ER  G
Sbjct: 171 AREVTADGIGVSVLCPMVVETNLVANS-----ERIRG 202

Length = 275

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           V+TGA++GIG ATA   A RGA V +  RS E        +R + G E + + + D++  
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR-ELGGEAIAV-VADVADA 61

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITESMVP 182
            +++  A+    +   +   VNNAGV    R    T E F   F VN LG    T + +P
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 183 LLEKAAPDARVITVSSGGMY 202
            L +    A +I V S   Y
Sbjct: 122 HLRRRGGGA-LINVGSLLGY 140

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 24/205 (11%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGAN G+G   A GLA  GA +    RS E  ET         G        
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-EPSETQ--QQVEALG-RRFLSLT 58

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            DLS I  IK+  +    +   + +LVNNAG++        + + ++    VN+   + +
Sbjct: 59  ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFL 118

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG---MEQYARNKRVQVAL 233
           T++      K     ++I ++S  M              SF G   +  Y  +K     L
Sbjct: 119 TQAAAKHFLKQGRGGKIINIAS--ML-------------SFQGGIRVPSYTASKHAVAGL 163

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAET 258
           T+  +  +  KGI   ++ PG+  T
Sbjct: 164 TKLLANEWAAKGINVNAIAPGYMAT 188

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           E K  ++TGA   IG A  + L S GA + +   +    E     + +   N  + LE  
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALE-L 59

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRL--ITSEGFELNFAVNVLGTY 174
           D++S   IK     +  K   + +L+NNA     +  +R      E +     VN+ G +
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 175 TITESMVPLLEK 186
             +++ + L +K
Sbjct: 120 LCSQAFIKLFKK 131

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 56/249 (22%), Positives = 80/249 (32%), Gaps = 47/249 (18%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           V+TGA +GIG ATAE L   G TV                I       +V  +L      
Sbjct: 3   VITGAASGIGAATAELLEDAGHTV----------------IGIDLREADVIADLSTPEGR 46

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
                 A+  +  +  +  LVN AGV        +    L   VN  G   + E+++P L
Sbjct: 47  AAA--IADVLARCSGVLDGLVNCAGV------GGTTVAGLVLKVNYFGLRALMEALLPRL 98

Query: 185 EKAAPDARVITVSSGG---------MYTAHLTDDLEF-----NSGSFDGMEQYARNKRVQ 230
            K    A V+  S  G         +  A                   G   YA +K   
Sbjct: 99  RKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEAL 158

Query: 231 VALTEKWS-EMYKEKGIGFYSMHPGWAETP--GVAKSMPSFNERFA------GNLRTSEE 281
              T + +       G+   ++ PG  ETP        P   E         G     +E
Sbjct: 159 TVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRAEPDE 218

Query: 282 GADTVLWLA 290
            A  + +LA
Sbjct: 219 IAPVIAFLA 227

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TGA AGIG   A   A+ GA+V +   + +     +  I+   G +     
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACR 66

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTI 176
            CD++S  E+ + A+    K   V +LVNNAG        +    F   + +NV   + +
Sbjct: 67  -CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 177 TESMVPLLEKAAPDARVITVSS 198
           ++ + P +EK      ++T++S
Sbjct: 126 SQLVAPEMEKNGGGV-ILTITS 146

Length = 255

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 21/241 (8%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTGA +GIG A A  LA+ GA V +     E+G  A + +    G   ++L   D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDF-GEEGAEAAAKVAGDAGGSVIYLPA-D 58

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           ++   EI       + +   + +LVNNAG+     +     E ++   AV +   +    
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIR 118

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           + +P + K     R+I ++S     AH      F S        Y   K   + LT+  +
Sbjct: 119 AALPHM-KKQGWGRIINIAS-----AHGLVASPFKSA-------YVAAKHGLIGLTKVLA 165

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLV 298
               E GI   ++ PG+  TP V K +       A      EE     + L  QP ++ V
Sbjct: 166 LEVAEHGITVNAICPGYVRTPLVEKQIAD----QAKTRGIPEEQVIREVMLKGQPTKRFV 221

Query: 299 S 299
           +
Sbjct: 222 T 222

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 53.9 bits (129), Expect = 2e-08
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 23/241 (9%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHL 116
           ++ GK  +VTG   GIG A    LA  GA V +    SKE  E  ++ +       +V+ 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL--GKEGHDVYA 60

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGFELNFAVNVLGTY 174
              D+S + +              V +LVNNAG+  +   + +  E +E    VN+   +
Sbjct: 61  VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF 120

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
             T +++P + +A  + R+I++SS           +   +G F G   Y+  K   +  T
Sbjct: 121 NTTSAVLPYITEAE-EGRIISISS-----------IIGQAGGF-GQTNYSAAKAGMLGFT 167

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRT-----SEEGADTVLWL 289
           +  +    +  +   ++ PG+ +T  VA+      ++    +       ++E A  V++L
Sbjct: 168 KSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYL 227

Query: 290 A 290
            
Sbjct: 228 C 228

Length = 247

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 4/117 (3%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              GK  VVTGA +GIG  TA   A  GA V      +   E     IR+  G    H  
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-AGAV-AHAY 369

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
             D+S    +++FA     ++    ++VNNAG+      +  ++E ++    VN+ G
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWG 426

Length = 582

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 41/193 (21%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
            GK  V+TGA +G G A A   A+ G  + +    ++  + A++ +R+  G E V     
Sbjct: 5   AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-QGAE-VLGVRT 62

Query: 120 DLSSITEIKSFAN----RFSLKNKPVHVLVNNAGV------LENNRLITSEGFELNFAVN 169
           D+S   ++++ A+    RF      VH+L NNAGV       EN    +   +E    VN
Sbjct: 63  DVSDAAQVEALADAALERFG----AVHLLFNNAGVGAGGLVWEN----SLADWEWVLGVN 114

Query: 170 VLGTYTITESMVPL-LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG------MEQ 222
           + G      +  PL L  A  D           Y  H+      N+ S  G      M  
Sbjct: 115 LWGVIHGVRAFTPLMLAAAEKDPA---------YEGHIV-----NTASMAGLLAPPAMGI 160

Query: 223 YARNKRVQVALTE 235
           Y  +K   V+LTE
Sbjct: 161 YNVSKHAVVSLTE 173

Length = 287

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTG  +GIG A A+ LA+ GA V +     E  E    A +       V    CD
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQ---CD 57

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           ++S  +++S   +  L+   + ++V+NAG+  ++ +   + E +  +  +N+ G + ++ 
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 179 SMVPLLEKAAPDARVITVSS 198
               +++       ++  +S
Sbjct: 118 EAFRIMKSQGIGGNIVFNAS 137

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 34/249 (13%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC-DLSS 123
            +TG   GIG A A+  A+ G  + ++ R  E  +     +    G+E  HL +  D++ 
Sbjct: 273 AITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK----KLAEALGDE--HLSVQADITD 326

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLE---NNRLITSEGFELNFAVNVLGTYTITESM 180
              ++S   +   +   + VLVNNAG+ E    +   ++E F   + VN+ G +    + 
Sbjct: 327 EAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAA 386

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
             L+ +      ++ + S     + L         +      Y  +K     L+   +  
Sbjct: 387 ARLMSQGGV---IVNLGS---IASLL---------ALPPRNAYCASKAAVTMLSRSLACE 431

Query: 241 YKEKGIGFYSMHPGWAETPGVAK-------SMPSFNERFA-GNLRTSEEGADTVLWLALQ 292
           +   GI   ++ PG+ ETP V            S   R   G L   EE A+ + +LA  
Sbjct: 432 WAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLA-S 490

Query: 293 PKEKLVSGS 301
           P    V+G+
Sbjct: 491 PAASYVNGA 499

Length = 520

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 25/209 (11%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           +TGA++GIG A A   A  G  V +  R  ++    L  ++++  N N  +E+  L  +T
Sbjct: 3   ITGASSGIGRALAREFAKAGYNVALAARRTDR----LDELKAELLNPNPSVEVEIL-DVT 57

Query: 126 EIKSFANRFSLKNK---PVHVLVNNAGVLENNRLITSEGFELNFA---VNVLGTYTITES 179
           + +      +        + +++ NAGV +   L     F+        N+LG   I E+
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSL-GDLSFKAFRETIDTNLLGAAAILEA 116

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
            +P   +A     ++ +SS                    G   Y+ +K    +L E    
Sbjct: 117 ALPQF-RAKGRGHLVLISSVAALR------------GLPGAAAYSASKAALSSLAESLRY 163

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
             K++GI    ++PG+ +TP  A      
Sbjct: 164 DVKKRGIRVTVINPGFIDTPLTANMFTMP 192

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 53.3 bits (128), Expect = 4e-08
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 16/142 (11%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++ K  +VTG + GIG A    L   G+ V      KE     +   +            
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI-KEPSYNDVDYFK------------ 50

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTI 176
            D+S+  ++    +    K   + +LVNNAG+     +   E  E +    VNV G + +
Sbjct: 51  VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLM 110

Query: 177 TESMVPLLEKAAPDARVITVSS 198
           ++  +P + K      +I ++S
Sbjct: 111 SKYTIPYMLKQD-KGVIINIAS 131

Length = 258

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           + +  +VTGA  GIG   A   A  GATV ++ R++EK E     I +  G +   + L 
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL- 69

Query: 120 DLSSITE--IKSFANRFSLKNKPVHVLVNNAGVL------ENNRLITSEGFELNFAVNVL 171
           DL + T    +  A+    +   +  +++NAG+L      E       E ++    VNV 
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQ---QDPEVWQDVMQVNVN 126

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSG 199
            T+ +T++++PLL K +P A ++  SS 
Sbjct: 127 ATFMLTQALLPLLLK-SPAASLVFTSSS 153

Length = 247

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 52.9 bits (127), Expect = 4e-08
 Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 37/249 (14%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA AGIG A A  LA  GA V  V  +   G  A + +    G        
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARV--VV-ADIDGGAAQAVVAQIAG----GALA 53

Query: 119 C--DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGT 173
              D++   ++ +   R   +   + +LVNNAG +     I       ++   A+N+ GT
Sbjct: 54  LRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           +       P +  A     ++ +SS    +               G   Y  +K     L
Sbjct: 114 FLCCRHAAPRM-IARGGGSIVNLSSIAGQSGDP------------GYGAYGASKAAIRNL 160

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN------------ERFAGNLRTSEE 281
           T   +   +  GI   ++ PG  +TP +   +  F              +  G L   E+
Sbjct: 161 TRTLAAELRHAGIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPED 220

Query: 282 GADTVLWLA 290
            A  V++L 
Sbjct: 221 VAAAVVFLL 229

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 27/143 (18%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS- 123
           +VTGA++GIG ATAE LA  G  V+   R+  +            G E + L++ D +S 
Sbjct: 8   LVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-------PIPGVELLELDVTDDASV 60

Query: 124 ---ITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLGTYT 175
              + E+ + A R       + VLVNNAGV      E +    ++   L F  NV G   
Sbjct: 61  QAAVDEVIARAGR-------IDVLVNNAGVGLAGAAEESS--IAQAQAL-FDTNVFGILR 110

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +T +++P + +A    R+I +SS
Sbjct: 111 MTRAVLPHM-RAQGSGRIINISS 132

Length = 270

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  V+TG    +G A A+ LA  GA V ++ R++EK E  ++ I++  G E + ++ 
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVK- 65

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAG--------VLENNRLITS---------EG 161
            D+     ++    +      P  +L+N AG          E + LI           EG
Sbjct: 66  ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 162 FELNFAVNVLGTYTIT----ESMVPLLEKAAPDARVITVSSGGMYTA 204
           FE  F +N+LGT   T    + MV           +I +SS   +T 
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMV-----GRKGGNIINISSMNAFTP 167

Length = 278

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
            M   I  +  V+TGA+AG+G ATA   A RGA V ++ R +E  E   + IR+  G E 
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEA 59

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
           + +   D++    +++ A+R   +  P+   VNNA V        +T E F     V  L
Sbjct: 60  LAVV-ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYL 118

Query: 172 GT 173
           G 
Sbjct: 119 GV 120

Length = 334

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 8/141 (5%)

Query: 59  IEGKNCVVTGA-NAGIGYATAEGLASRGATVYMVCRSKEK--GETALSAIRSKTGNENVH 115
           + GK  +VT A   GIG ATA      GA V ++    E+  GETA   + ++ G   V 
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARV-VISDIHERRLGETA-DELAAELGLGRVE 72

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGT 173
             +CD++S  ++ +  +    +   + VLVNNAG+     ++  T + +     V + GT
Sbjct: 73  AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 174 YTITESMVPLLEKAAPDARVI 194
           +  T + +  + +A     VI
Sbjct: 133 FRATRAALRYM-RARGHGGVI 152

Length = 262

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R + K  +VTGA  GIG A AE LA  GA+V +   + E  E     I +  G   + ++
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA-IAVQ 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA---GVLENNRLITS--EGFELNFAVNVLG 172
           + D+S     K+ A+        +  LVNNA   G ++ + LIT   + ++   +VN+ G
Sbjct: 62  V-DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDG 120

Query: 173 TYTITESMVPLLEKAAPDARVITVSSG 199
               T ++   + K    A V   S+ 
Sbjct: 121 ALVCTRAVYKHMAKRGGGAIVNQSSTA 147

Length = 250

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TG + GIG+A AE L + G  V +  R +++ E A + + +K    NV    
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLA 60

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGTYTI 176
            D+    +++   +        + VL+ NAGV        +T E + L    N+ G +  
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 177 TESMVPLLEKAAPDARVITVSS 198
            ++ VP L++      +I +SS
Sbjct: 121 IKAAVPALKRGG--GYIINISS 140

Length = 237

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 51.8 bits (124), Expect = 9e-08
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++ K  +VTG   GIG AT    A  GA V +   ++E  E   + IR+K GN       
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF--A 58

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLGTYTI 176
           CD++    + +          PV VLVNNAG              +E   A+N+ G   +
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 177 TESMVP-LLEKAAPDARVITVSS 198
             +++P ++E+ A   R++ ++S
Sbjct: 119 HHAVLPGMVERGA--GRIVNIAS 139

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
           D+   + GK  VVTG  +GIG+A AE  A++GA V ++ RS+      ++ + ++    N
Sbjct: 8   DLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQLLGGN 62

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVL 171
               +CD+S    +++           + +LVN+AGV  L     ++ E ++    +N+ 
Sbjct: 63  AKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK 122

Query: 172 GTY 174
           G++
Sbjct: 123 GSF 125

Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 27/245 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELC 119
           GK  +VTG+ +GIG   A  LA+ GA + +       + E   + + +K G + ++    
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHG-A 60

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVLGTYTI 176
           DLS    I+        +   V +LVNNAG+ ++   I    +E ++   A+N+   +  
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGI-QHVAPIEDFPTEKWDAIIALNLSAVFHT 119

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG--SFDGMEQYARNKRVQVALT 234
           T   +P ++K     R+I ++S      H         G  +      Y   K   V LT
Sbjct: 120 TRLALPHMKKQGW-GRIINIAS-----VH---------GLVASANKSAYVAAKHGVVGLT 164

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
           +  +      G+   ++ PGW  TP V K + +  ++   N    E+ A  +L L  QP 
Sbjct: 165 KVVALETAGTGVTCNAICPGWVLTPLVEKQISALAQK---NGVPQEQAARELL-LEKQPS 220

Query: 295 EKLVS 299
           ++ V+
Sbjct: 221 KQFVT 225

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 6/144 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R   K  +VTG + GIG          GA V + C   E    AL +  ++ G  +    
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKV-VFCARGEAAGQALESELNRAGPGSCKFV 64

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
            CD++   +IK+  +    +   +  LVNNAG    ++     +++ F     +N++  +
Sbjct: 65  PCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYF 124

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
             ++  +P L K+     +I +SS
Sbjct: 125 LASKYALPHLRKS--QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 24/208 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRSKTGNENVHL 116
           R++G+  ++TGA++GIG ATA   A  GA + +    +E+ + A +  +    G + V L
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLGT 173
              DL      +    R   +   + +LVN AG    +++   IT+E F+  F  NV   
Sbjct: 112 P-GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM 170

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           + + ++ +P L    P A +I   S   Y  +  L D              YA  K   V
Sbjct: 171 FWLCKAAIPHLP---PGASIINTGSIQSYQPSPTLLD--------------YASTKAAIV 213

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           A T+  ++   EKGI   ++ PG   TP
Sbjct: 214 AFTKALAKQVAEKGIRVNAVAPGPVWTP 241

Length = 300

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK  +VTG + G+G   AE L   GA V +  R  E+ E A + + +  G + + + 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIA 67

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLG 172
             D++   +I+  A     +   V +LVNNAG       E++ +   E ++    +NV G
Sbjct: 68  -ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPV---EAWDKVMNLNVRG 123

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            + +++++           R+I V+S
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVAS 149

Length = 259

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            K  ++TGA  GIG A AE LA+ G  + +   + E+   +     S+ G   V +   D
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGA-D 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           ++   ++++  ++   K     V+VNNAG+     L  IT E  +  +AVNV G     +
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           +     +K     ++I  SS                  F  +  Y+ +K     LT+  +
Sbjct: 121 AAARQFKKLGHGGKIINASSI---AGVQ---------GFPNLGAYSASKFAVRGLTQTAA 168

Query: 239 EMYKEKGIGFYSMHPGWAETP 259
           +    KGI   +  PG  +T 
Sbjct: 169 QELAPKGITVNAYAPGIVKTE 189

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
            M  R  GK  VVTGA  GIG   A   A+ GA V +V RS+   E A  A     G E 
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVA--AELRAAGGE- 57

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
                 DL +    ++           + VL+NN G
Sbjct: 58  ALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 12/146 (8%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  K  +VTGA+ G+G   A+  A+ GATV +V R ++K E    AI      E   +  
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 119 CDLSSITEIKSFANRFSLK-----NKPVHVLVNNAG---VLENNRLITSEGFELNFAVNV 170
            DL S  E K F  +F+          +  +V+ AG    L      T   +   + +N 
Sbjct: 64  -DLMSAEE-KEF-EQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINT 120

Query: 171 LGTYTITESMVPLLEKAAPDARVITV 196
           +    +T ++ PLL K +PDA VI V
Sbjct: 121 VAPMGLTRALFPLL-KQSPDASVIFV 145

Length = 239

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 18/208 (8%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              ++TGA +G+G A A   A  G  + +   ++E GE  L  +R   G  +   + CD+
Sbjct: 1   NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG--DGFYQRCDV 58

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITES 179
              +++ + A     K   + V+VNNAGV        ++ E ++   A+N++G     ++
Sbjct: 59  RDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKA 118

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
            +PL ++     R++ ++S     A L             M  Y   K   VAL+E    
Sbjct: 119 FLPLFKRQK-SGRIVNIAS----MAGLMQ--------GPAMSSYNVAKAGVVALSETLLV 165

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPS 267
              +  IG + + P + +T  +  S   
Sbjct: 166 ELADDEIGVHVVCPSFFQT-NLLDSFRG 192

Length = 270

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 50/243 (20%), Positives = 102/243 (41%), Gaps = 23/243 (9%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC----RSKEKGETALSAIRSKTGNE 112
           A ++ +  ++TG + G+G A A  LA+ GA V ++     R + + +   + I +  G  
Sbjct: 2   ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG-- 59

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGFELNFAVNV 170
                  D+      ++  +    +   + +LVNNAG+  +     ++ E ++    VN+
Sbjct: 60  KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNL 119

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
            G + +T++ +P + +A    R++ ++S      +             G   YA +K   
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN------------RGQVNYAASKAGL 167

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS---FNERFAGNLRTSEEGADTVL 287
           + LT+  +     +GI   ++ PG   TP    + P+    N      L   +E A  V 
Sbjct: 168 IGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVA 227

Query: 288 WLA 290
           +L 
Sbjct: 228 FLV 230

Length = 249

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 28/216 (12%)

Query: 57  ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSK---------EKGETALSAI 105
            +++ K  VVTG +   GIG A  + LA  GA ++    +          ++ E      
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 106 RSKTGNENVH-LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGF 162
                   V  +EL DL+     K   N+ + +    H+LVNNA    NN    +T+E  
Sbjct: 62  ELLKNGVKVSSMEL-DLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEEL 120

Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ 222
           + ++ VNV  T  ++       +K +   R+I ++SG               G   G   
Sbjct: 121 DKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQ------------FQGPMVGELA 167

Query: 223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET 258
           YA  K    ALT   +      GI   +++PG  +T
Sbjct: 168 YAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDT 203

Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 21/163 (12%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++ K  V+TG    +G A A  LA  GA V  + R++EKG+     I +  G   + L  
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITAL-GGRAIALA- 60

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAG------VLENNRL----------ITSEGF 162
            D+     ++        +   V +L+N AG        +              +  EG+
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 163 ELNFAVNVLGT-YTITESMVPLLEKAAPDARVITVSSGGMYTA 204
           E  F +N+ G+          +LE+      +I +SS   ++ 
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGS--IINISSMNAFSP 161

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 7e-07
 Identities = 71/275 (25%), Positives = 102/275 (37%), Gaps = 66/275 (24%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNE-NVHLEL 118
           GK  +VTG++ GIG  TA+ LA  GA V +  R K  +    ++ I +  G    V  +L
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65

Query: 119 CDLSSITEIKSFA-NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFA------VNVL 171
            D  S+  +   A   F      +  LV NA          S G E          +N  
Sbjct: 66  TDEESVAALMDTAREEFG----GLDALVLNA----------SGGMESGMDEDYAMRLNRD 111

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV-Q 230
               +  + +PL+      +RV+ V+S   + AH    ++         E  AR+KR  +
Sbjct: 112 AQRNLARAALPLM---PAGSRVVFVTS---HQAHFIPTVKT----MPEYEPVARSKRAGE 161

Query: 231 VALTEKWSEMYKEKGIGF-----------------YSMHPGWAETPGVAKSMPSFNERFA 273
            AL     E+  EKGIGF                   ++PG  E    A          A
Sbjct: 162 DALRALRPEL-AEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREA----------A 210

Query: 274 GNLRTSEEGADTVLWLALQPKE----KLVSGSFYF 304
           G L T  E A  V      P      + V G+ YF
Sbjct: 211 GKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADYF 245

Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 49.4 bits (118), Expect = 7e-07
 Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 16/200 (8%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTG   GIG   AE LA  G  V  V    E+     +   ++ G + V  +L D+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAV-AVADLNEETAKETAKEINQAGGKAVAYKL-DV 58

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITES 179
           S   ++ S  ++ + K     V+VNNAGV     +  IT E  +  + VNV G     ++
Sbjct: 59  SDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQA 118

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
                +K     ++I  +S      H              +  Y+  K     LT+  ++
Sbjct: 119 AARQFKKQGHGGKIINAAS---IAGHE---------GNPILSAYSSTKFAVRGLTQTAAQ 166

Query: 240 MYKEKGIGFYSMHPGWAETP 259
               KGI   +  PG  +TP
Sbjct: 167 ELAPKGITVNAYCPGIVKTP 186

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 49.5 bits (118), Expect = 7e-07
 Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 10/143 (6%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTGA+ GIG   A  L ++GA V +     EK    L A+ ++ G E V +  
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK----LEALAAELG-ERVKIFP 58

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            +LS   E+K+   +     + V +LVNNAG+ ++   +  + E ++    VN+  T+ +
Sbjct: 59  ANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRL 118

Query: 177 TESMV-PLLEKAAPDARVITVSS 198
           T  +  P++ +     R+I ++S
Sbjct: 119 TRELTHPMMRRR--YGRIINITS 139

Length = 245

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 49.3 bits (118), Expect = 7e-07
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 15/146 (10%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           MQ     K+ ++TG ++GIG   A  L  RG  V   CR  +     ++ + S  G   +
Sbjct: 1   MQ-----KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD----VARMNSL-GFTGI 50

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLG 172
            L+L D  S+   ++     +L +  ++ L NNAG  V      I+ +  E  F+ N  G
Sbjct: 51  LLDLDDPESVE--RAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFG 108

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
           T+ +T  ++P +     + R++  SS
Sbjct: 109 THQLTMLLLPAM-LPHGEGRIVMTSS 133

Length = 256

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 24/201 (11%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +  ++ GA+ G+G    + L  RG  V    R  ++   AL A+        VH+E  D+
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQALP------GVHIEKLDM 54

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVL--ENNRLITSEGFELN--FAVNVLGTYTIT 177
           +    +     R  L+ +   +L  NAG+    +     +   E+   F  N +    + 
Sbjct: 55  NDPASLDQLLQR--LQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLA 112

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
             ++  +    P   V+   S  + +  L D  E        M  Y  +K    ++T  +
Sbjct: 113 RRLLGQV---RPGQGVLAFMSSQLGSVELPDGGE--------MPLYKASKAALNSMTRSF 161

Query: 238 SEMYKEKGIGFYSMHPGWAET 258
                E  +   SMHPGW +T
Sbjct: 162 VAELGEPTLTVLSMHPGWVKT 182

Length = 225

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 34/165 (20%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM---------VCRSKEKGETALSAIRSK 108
           R +G+  +VTGA  G+G A A   A RGA V +           +S    +  +  I++ 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 109 TGNENVHLELCDLSSI--------TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--IT 158
            G       + +  S+        T I +F          V +LVNNAG+L +     ++
Sbjct: 62  GGKA-----VANYDSVEDGEKIVKTAIDAFGR--------VDILVNNAGILRDRSFAKMS 108

Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG-GMY 202
            E ++L   V++ G++ +T +  P + K     R+I  SS  G+Y
Sbjct: 109 EEDWDLVMRVHLKGSFKVTRAAWPYMRKQK-FGRIINTSSAAGLY 152

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 39/251 (15%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG  +GIG ATA   A  GA V +     + G+   + +     +  VH  
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDIS-FVH-- 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGT 173
            CD++   ++++  +    +   + ++ NNAGVL          + E FE    VNV G 
Sbjct: 58  -CDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116

Query: 174 YTITE----SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +  T+     M+P     A    +++V+S       L            G   Y  +K  
Sbjct: 117 FLGTKHAARVMIP-----AKKGSIVSVASVAGVVGGL------------GPHAYTASKHA 159

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF----------AGNLRTS 279
            + LT   +    E GI    + P    TP +       +E             G     
Sbjct: 160 VLGLTRSAATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRP 219

Query: 280 EEGADTVLWLA 290
           E+ A  VL+LA
Sbjct: 220 EDIAAAVLYLA 230

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK   + G + G+GYA A      GA V +  R++ K +  +    SK G  N+H  
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK-RMKKTLSKYG--NIHYV 58

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
           + D+SS    ++   + +     +  LV   G    + +    G E     ++       
Sbjct: 59  VGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAV 118

Query: 178 ESMVPLLEKAAPDARVITVSS-GGMYTA 204
            + +  L      + ++ VSS  G+Y A
Sbjct: 119 NASLRFL---KEGSSIVLVSSMSGIYKA 143

Length = 238

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 9/139 (6%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN--ENVHLELCDLS 122
           +VT +++GIG A A  LA +G  + +   S E+G    +      G   E   L+L DL 
Sbjct: 6   IVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLP 65

Query: 123 SITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITES 179
              + +     R       + VLVNNAG +     +    + +   F V+V G +  ++ 
Sbjct: 66  EGAQALDKLIQRLG----RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121

Query: 180 MVPLLEKAAPDARVITVSS 198
               + K     R+I ++S
Sbjct: 122 AARHMVKQGQGGRIINITS 140

Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  K  +VT +  GIG A A  LA  GA V +  R ++  + A++ ++ +    +V   +
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE--GLSVTGTV 65

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYT 175
           C +    + +         +  V +LV+NA V     N    T E ++    VNV  T  
Sbjct: 66  CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATAL 125

Query: 176 ITESMVPLLEKAAPDARVITVSSGG 200
           +T+++VP +EK    + VI  S   
Sbjct: 126 MTKAVVPEMEKRGGGSVVIVSSVAA 150

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 30/254 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTG   GIG          G  V      +E+G     A  ++    N+     D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERG-----ADFAEAEGPNLFFVHGD 55

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS---EGFELNFAVNVLGTYTIT 177
           ++  T +K        K   + VLVNNA    +  +++S   E ++   +VN+ G Y ++
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARG-SKGILSSLLLEEWDRILSVNLTGPYELS 114

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
                 L K     R+I ++S   + +      E +S      E YA +K   VALT   
Sbjct: 115 RYCRDELIKN--KGRIINIASTRAFQS------EPDS------EAYAASKGGLVALTHAL 160

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNERFAGNLRTSEEGADTVLWLAL 291
           + M     I    + PGW  T    +   +        +  AG + T ++ A+ VL+L  
Sbjct: 161 A-MSLGPDIRVNCISPGWINTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQ 219

Query: 292 QPKEKLVSGSFYFD 305
           Q    +   +F  D
Sbjct: 220 QDAGFITGETFIVD 233

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 49/199 (24%), Positives = 74/199 (37%), Gaps = 38/199 (19%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTGA  GIG A +  LA+ G  V  +              RS   +    L  CDL+ I 
Sbjct: 8   VTGATKGIGLALSLRLANLGHQVIGIA-------------RSAIDDFPGELFACDLADIE 54

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE------GFELNFAVNVLGTYTITES 179
           +  +   + +  + PV  +VNN G+     L   +       ++LN    V  T    E 
Sbjct: 55  QTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEG 113

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
           M     K     R++ + S  ++            G+ D    Y+  K   V  T  W+ 
Sbjct: 114 M-----KLREQGRIVNICSRAIF------------GALD-RTSYSAAKSALVGCTRTWAL 155

Query: 240 MYKEKGIGFYSMHPGWAET 258
              E GI   ++ PG  ET
Sbjct: 156 ELAEYGITVNAVAPGPIET 174

Length = 234

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTG + G+G A AE L   G  V  V RS+     A +  R       V L+L D ++ 
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERL----AEVELDLSDAAAA 60

Query: 125 TE-IKSFANRFSLKNKPVHVLVNNAGVLEN-NRLITSEGFEL--NFAVNVLGTYTITESM 180
              +        +      +L+NNAG +E    L T +   +     +NV     +T ++
Sbjct: 61  AAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAAL 120

Query: 181 VPLLEKAAPDARVITVSSG 199
                 AA + R++ +SSG
Sbjct: 121 AQAASDAA-ERRILHISSG 138

Length = 243

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             K  ++TGA +GIG A A    ++GA VY V +  +   +            N H    
Sbjct: 4   MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS-----------GNFHFLQL 52

Query: 120 DLSS-ITEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEG-FELNFAVNVLGTYT 175
           DLS  +  +  +          V +L N AG+L++ +  L TS   ++  F  N+  T+ 
Sbjct: 53  DLSDDLEPLFDWVPS-------VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105

Query: 176 ITESMVPLL 184
           +T + +P +
Sbjct: 106 LTRAYLPQM 114

Length = 235

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             K  +VTGA  GIG+A A+ L   G  V +V  ++E  + A   + SK G + + ++  
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL-SKDGGKAIAVKA- 58

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+S   ++ +   +       ++V+VNNAGV     +  IT E F+  + +NV G     
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGI 118

Query: 178 ESMVPLLEKAAPDARVITVSS 198
           ++     +K     ++I  +S
Sbjct: 119 QAAQEAFKKLGHGGKIINATS 139

Length = 256

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           VTGA   IG A A  LA+ G  V +   RS+++ E   + IR+  G   V L+  DL+  
Sbjct: 14  VTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQ-ADLADE 71

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
            E+++   R S    P+ +LVNNA + E +     T   ++ + A N+   + + ++   
Sbjct: 72  AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFA- 130

Query: 183 LLEKAAPDAR 192
              +A P   
Sbjct: 131 ---RALPADA 137

Length = 258

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 44/259 (16%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +  +VTGA+ G+G A A   A  GA V +      +   A++A       E       D+
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAA----EAGERAIAIQADV 56

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGV----LENNRL----ITSEGFELNFAVNVLGT 173
               ++++          PV  +VNNA +      + R     I  E ++      V G 
Sbjct: 57  RDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 174 YTITESMVPLLEKAAPDARVITVSSG----GMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
             + ++++P  ++     RVI + +      +   H                 Y   K  
Sbjct: 117 LNLLQAVLPDFKERG-SGRVINIGTNLFQNPVVPYH----------------DYTTAKAA 159

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF--------AGNLRTSEE 281
            +  T   ++     GI    +  G  +    + + P   E F         G + T ++
Sbjct: 160 LLGFTRNMAKELGPYGITVNMVSGGLLKVTDASAATP--KEVFDAIAQTTPLGKVTTPQD 217

Query: 282 GADTVLWLALQPKEKLVSG 300
            AD VL+ A  P  + V+G
Sbjct: 218 IADAVLFFA-SPWARAVTG 235

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GKN ++TG+  GIG+  A GLA  GA + +   + E+ E A++ +R +      H   
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAP 64

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
            +++   E+++          P+ VL+NNAG+
Sbjct: 65  FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 52/243 (21%), Positives = 88/243 (36%), Gaps = 37/243 (15%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           VTG + GIG A A  LA RGA V +  R SK+      + I    G     +   D+S  
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGG--KAVVVRADVSQP 60

Query: 125 TEIKSFANRFSLKNKPVHVLVNNA--GVLENNRLITSEGFELNFAVNVLGTYTITESMVP 182
            +++        +   + VLV+NA  G       +T   ++     N+       +    
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120

Query: 183 LLEKAAPDARVITVSSGGM------YTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           L+ +     R++ +SS G       Y A           +   +E   R   V++     
Sbjct: 121 LMRERG-GGRIVAISSLGSIRALPNYLAV--------GTAKAALEALVRYLAVELG---- 167

Query: 237 WSEMYKEKGIGFYSMHPGWAET------PGVAKSMPSFNERF-AGNLRTSEEGADTVLWL 289
                  +GI   ++ PG  +T      P     + +      AG + T ++ AD V +L
Sbjct: 168 ------PRGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFL 221

Query: 290 ALQ 292
              
Sbjct: 222 CSD 224

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 16/149 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVHL 116
              GKN VV G  +GI    A+  A  GA V +  RS+EK + A++ ++        V  
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 117 ELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNV 170
           ++ D +++       A+ F     P+ VLV+ A     N       +++ GF+    +++
Sbjct: 66  DVRDYAAVEAAFAQIADEFG----PIDVLVSGAA---GNFPAPAAGMSANGFKTVVDIDL 118

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSG 199
           LGT+ + ++  PLL +  P A +I +S+ 
Sbjct: 119 LGTFNVLKAAYPLLRR--PGASIIQISAP 145

Length = 264

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           +  R+ G+  V+TG  +GIG ATA  LA+ GATV +     E G+ A   +    G   V
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFV 56

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
             ++ D  ++  +  F          V +  NNAG+
Sbjct: 57  PTDVTDEDAVNAL--FDTAAETYGS-VDIAFNNAGI 89

Length = 255

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TG+  GIG A A+     GA V +   + E      +A         + L++
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARA--TAAEIGPAACAISLDV 58

Query: 119 CDLSSITEIKSFA-NRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
            D +SI    +   +R+      + +LVNNA + +   +  IT E ++  FA+NV GT  
Sbjct: 59  TDQASIDRCVAALVDRWG----SIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLF 114

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           + +++   +       ++I ++S
Sbjct: 115 MMQAVARAMIAQGRGGKIINMAS 137

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLA---SRGATVYMVCRSKEKGETALSAIRSKTGN--ENVHL 116
              ++TG ++GIG   A  LA   S+   VY   R  +K      A  +  G   E + L
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVL 171
           ++CD  S+      A    +  + V VLV NAGV     LE    ++ +     F VNV 
Sbjct: 61  DVCDSKSVA-----AAVERVTERHVDVLVCNAGVGLLGPLE---ALSEDAMASVFDVNVF 112

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGM 201
           GT  + ++ +P +++      ++T S GG+
Sbjct: 113 GTVRMLQAFLPDMKRRGSGRILVTSSVGGL 142

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 36/181 (19%), Positives = 56/181 (30%), Gaps = 30/181 (16%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTG    IG      L   G  V ++ R +         IR   G+      L D  ++
Sbjct: 2   LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGD------LTDPDAL 55

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
             +        L       +++ A                    NVLGT  + E+     
Sbjct: 56  ERL--------LAEVQPDAVIHLAAQSGVGASFEDP--ADFIRANVLGTLRLLEAA---- 101

Query: 185 EKAAPDARVITVSSGGMYTAH----LTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
            + A   R +  SS  +Y       +T+D      S      YA  K     L E ++  
Sbjct: 102 -RRAGVKRFVFASSSEVYGDVADPPITEDTPLGPLS-----PYAAAKLAAERLVEAYARA 155

Query: 241 Y 241
           Y
Sbjct: 156 Y 156

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 9/138 (6%)

Query: 64  CVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS 122
            ++TG   G+G   A  LA+RGA  + ++ R       A  A   + G   V +  CD++
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESM 180
               + +     +    P+  +++ AGVL +  L  +T   F    A  V G   + E  
Sbjct: 213 DPAALAALLAELA-AGGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNLHE-- 269

Query: 181 VPLLEKAAPDARVITVSS 198
              L    P    +  SS
Sbjct: 270 ---LTPDLPLDFFVLFSS 284

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 2/140 (1%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            +   VTG   GIG  TA  LA+ GA V +   + E  E   + I  + G         D
Sbjct: 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMD 473

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           ++    +K+     +L    V ++VNNAG+  ++     T + ++LN  +   G + +  
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAR 533

Query: 179 SMVPLLEKAAPDARVITVSS 198
                + +      ++ ++S
Sbjct: 534 EAFRQMREQGLGGNIVFIAS 553

Length = 676

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 40/196 (20%), Positives = 68/196 (34%), Gaps = 27/196 (13%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              +VTG    IG    E L + G  V  + R ++  +  LS +      E V L+L D 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV------EFVVLDLTDR 54

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMV 181
             + E+                +++ A          S+  E    VNV GT  + E+  
Sbjct: 55  DLVDELAKGVPD---------AVIHLAAQSSVPDSNASDPAEF-LDVNVDGTLNLLEAA- 103

Query: 182 PLLEKAAPDARVITVSSGGM-YTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
               +AA   R +  SS  + Y       ++ + G    +  Y  +K       E+    
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK----LAAEQLLRA 155

Query: 241 Y-KEKGIGFYSMHPGW 255
           Y +  G+    + P  
Sbjct: 156 YARLYGLPVVILRPFN 171

Length = 314

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 45.6 bits (109), Expect = 7e-06
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIR--SKTGNENVHLELCDL 121
           +VTG   G+G   A  LA RGA  + ++ RS      A + +      G E V +  CD+
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAE-VTVVACDV 62

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGT 173
           S    +++          P+  +++ AGVL +  L   T+E F    A  V G 
Sbjct: 63  SDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGA 116

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 19/161 (11%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA-IRSKTGNE-NV 114
             +  K  +VTGA+ GIG A A  LA+ G  V +           L A I +  G    V
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLG 172
             ++ D +++T +   A         + VLVNNAGV+    +     E F+   A N+ G
Sbjct: 61  QADVADAAAVTRLFDAAET---AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRG 117

Query: 173 TYTITESMVPLLEKAAPDARVITVS---------SGGMYTA 204
            + +       L       R+I +S           G Y A
Sbjct: 118 AFVVLREAARHLG---QGGRIINLSTSVIALPLPGYGPYAA 155

Length = 245

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 46.5 bits (110), Expect = 7e-06
 Identities = 44/241 (18%), Positives = 79/241 (32%), Gaps = 16/241 (6%)

Query: 65  VVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSA-IRSKTGNENVHLELCDLS 122
           ++TGA  G IG    +GL + GA VY+      +  T     I +  G     L +    
Sbjct: 2   LITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVL-IVVPF 60

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNF--AVNVLGTYTITESM 180
           +    +            V+ L  +  +      I   G E+    + + +    +  ++
Sbjct: 61  NQGSKQDVEALAIGIYDTVNGLGWDLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLTNL 120

Query: 181 VPLLEKAAPDARVITVSSG--GMYTAHLTDDLEF--NSGSFDGMEQYARNKRVQVALTEK 236
           +           ++ +     G  T      L F  N G+F     Y+ +K     L  +
Sbjct: 121 LRPK-------GLVKIQKQLRGQETRPAQVILPFSPNHGTFGDDGAYSESKLHLETLFNR 173

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK 296
           W+       +     H GW       ++ P   E+      +  E A  +L L   PK  
Sbjct: 174 WASESWGNDLTVCGAHIGWTRGTLGGEAAPEGLEKGGVRTFSQAEMAFNLLGLYFPPKVV 233

Query: 297 L 297
           L
Sbjct: 234 L 234

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHLE 117
           + G+  +VTG+  G+G+  A  LA  GA V +  R+    E A++A+R+  G  E +  +
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
           + D  ++    +FA R   ++  + +LVNN G
Sbjct: 69  IADEEAVA--AAFA-RIDAEHGRLDILVNNVG 97

Length = 256

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 37/176 (21%), Positives = 56/176 (31%), Gaps = 34/176 (19%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           + GA   IG A A  L  +G  V ++ R+ ++         SK   E V +   DL  + 
Sbjct: 3   ILGATGFIGRALARELLEQGHEVTLLVRNTKRL--------SKEDQEPVAVVEGDLRDLD 54

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLE 185
            +             V V+++ AG                  V+V GT  + E+      
Sbjct: 55  SLSDAVQG-------VDVVIHLAG--------APRDTRDFCEVDVEGTRNVLEAA----- 94

Query: 186 KAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
           K A     I +SS G Y                    Y   K    A+  + S  Y
Sbjct: 95  KEAGVKHFIFISSLGAY------GDLHEETEPSPSSPYLAVKAKTEAVLREASLPY 144

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ K  VVTG+  GIG A A  LA  G+ V +   +  E+    L  ++ + G E +   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGI-GV 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           L D+S+    ++ A     +     +LVNNAG+
Sbjct: 62  LADVSTREGCETLAKATIDRYGVADILVNNAGL 94

Length = 252

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 16/142 (11%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           ++ ++TG ++GIG   A  L S G  V+  CR KE+   AL A     G E   L+  + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCR-KEEDVAALEA----EGLEAFQLDYAEP 59

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNN-----AGVLENNRLITSEGFELNFAVNVLGTYTI 176
            SI  +   A    L    +  L NN      G +E+   + +E     F  N  G + +
Sbjct: 60  ESIAAL--VAQVLELSGGRLDALFNNGAYGQPGAVED---LPTEALRAQFEANFFGWHDL 114

Query: 177 TESMVPLLEKAAPDARVITVSS 198
           T  ++P++ K     R++  SS
Sbjct: 115 TRRVIPVMRKQG-QGRIVQCSS 135

Length = 277

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 5/143 (3%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G   +VTG   GIG   A  LA +G  + +V R+ +K +    +I+SK     +   + D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGV-LENNRLI--TSEGFELNF-AVNVLGTYTI 176
            S   +      + +++   V VL+NN GV     R      E    N   VNV GT  +
Sbjct: 113 FSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKV 172

Query: 177 TESMVPLLEKAAPDARVITVSSG 199
           T++++P + K    A +I + SG
Sbjct: 173 TQAVLPGMLKRKKGA-IINIGSG 194

Length = 320

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 32/253 (12%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVC----RSKEKGETALSAIRSKTGNENVHLELCD 120
           ++TGA+ GIG ATA   A RG   Y VC    R+++  E  + AIR + G E + +   D
Sbjct: 6   IITGASRGIGAATALLAAERG---YAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVA-AD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN-RL--ITSEGFELNFAVNVLGTYTIT 177
           ++   ++         +   +  LVNNAG+LE   RL  + +      FA NV+G++   
Sbjct: 61  VADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCA 120

Query: 178 ESMVPLLEK--AAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
              V  +          ++ VSS     A L        GS      YA +K     +T 
Sbjct: 121 REAVKRMSTRHGGRGGAIVNVSS---MAARL--------GSPGEYIDYAASKGAIDTMTI 169

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAK-SMPSFNERFAGNLR-----TSEEGADTVLWL 289
             ++    +GI   ++ PG   T   A    P   +R    +      T+EE A  +LWL
Sbjct: 170 GLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWL 229

Query: 290 ALQPKEKLVSGSF 302
            L  +    +G+F
Sbjct: 230 -LSDEASYTTGTF 241

Length = 248

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 57/243 (23%), Positives = 91/243 (37%), Gaps = 41/243 (16%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRS---------KEKGETALSAIRSKTGNENVH 115
           +VTGA  GIG A A  L + G  V     S         +E G T    +R K       
Sbjct: 6   LVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTE-DQVRLKE------ 58

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
           L++ D     E  +       +  PV +LVNNAG+  ++    ++ + +      N+   
Sbjct: 59  LDVTDTEECAEALA---EIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSV 115

Query: 174 YTITES-MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           + +T+     + E+     R+I +SS           +    G F G   Y+  K   + 
Sbjct: 116 FNVTQPLFAAMCEQG--YGRIINISS-----------VNGLKGQF-GQTNYSAAKAGMIG 161

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGN-----LRTSEEGADTVL 287
            T+  +      GI    + PG+  TP V +  P   +          L T EE A  V 
Sbjct: 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVA 221

Query: 288 WLA 290
           +L 
Sbjct: 222 FLV 224

Length = 245

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 48/271 (17%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-----KG--ETALSAIRSK 108
              + GK   +TGA+ GIG A A   A  GA + +  ++ E      G   TA   I + 
Sbjct: 1   MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA 60

Query: 109 TGNE-NVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFEL 164
            G    +  ++ D   +   +     RF      + + VNNA    L        + F+L
Sbjct: 61  GGQALPLVGDVRDEDQVAAAVAKAVERFG----GIDICVNNASAINLTGTEDTPMKRFDL 116

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
              +NV GT+ ++++ +P L+K+  +  ++T+S            L  +   F     Y 
Sbjct: 117 MQQINVRGTFLVSQACLPHLKKSE-NPHILTLSP----------PLNLDPKWFAPHTAYT 165

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET----------PGVAKSMPSFNERFAG 274
             K      T   +E +++ GI   ++   W  T           G  ++M         
Sbjct: 166 MAKYGMSLCTLGLAEEFRDDGIAVNAL---WPRTTIATAAVRNLLGGDEAMRRS------ 216

Query: 275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFD 305
             RT E  AD    +  +P  +  +G+F  D
Sbjct: 217 --RTPEIMADAAYEILSRPARE-FTGNFLID 244

Length = 273

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 57/252 (22%), Positives = 92/252 (36%), Gaps = 42/252 (16%)

Query: 61  GKNCVVTGAN--AGIGYATAEGLASRGATVY----------MVCRSKEKGETALSAIRSK 108
            K  +VTGA+   GIG A    LA++G  ++          M     +K    L      
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNF 166
            G    H+E+ DLS            S +     +L+NNA    + RL  +T+E  + ++
Sbjct: 65  YGVRCEHMEI-DLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHY 123

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           AVNV  T  ++ +     +      R+I ++SG          L    G       YA  
Sbjct: 124 AVNVRATMLLSSAFAKQYDG-KAGGRIINLTSG--------QSL----GPMPDELAYAAT 170

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPG-----WAE---TPGVAKSMPSFNERFAGNLRT 278
           K    A T+  +    EKGI   +++PG     W        +    P       G +  
Sbjct: 171 KGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQ------GRVGE 224

Query: 279 SEEGADTVLWLA 290
             + A  + +L 
Sbjct: 225 PVDAARLIAFLV 236

Length = 256

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
             + G+  ++TG  +GIG A  E   + GA V ++ RS EK    L+++R + G ++V +
Sbjct: 2   GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFG-DHVLV 56

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT-------SEGFELNFAVN 169
              D++S  + +   ++       +   V NAG+ + N  +           F+  F VN
Sbjct: 57  VEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVN 116

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYT 203
           V G     ++ +P L+ +     + T+S+   Y 
Sbjct: 117 VKGYLLGAKAALPALKASGGSM-IFTLSNSSFYP 149

Length = 263

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 4/126 (3%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           MQ   + +  +VTG  +GIG   A GL + GA V +V R+ +K   A   I +  G   V
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAV 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVL 171
             E  D++   ++    +  +  +  +H +V+ AG  E    IT   S+ +     +NV 
Sbjct: 61  RYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 172 GT-YTI 176
           GT Y +
Sbjct: 121 GTMYVL 126

Length = 276

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 24/249 (9%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTG + GIG ATA  LA  G TV +  +        +  + ++ G +   L+  D+S  
Sbjct: 5   LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQ-ADISDE 63

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTITESMV 181
            ++ +        ++P+  LVNNAG+L     +   T+E      + NV G +      V
Sbjct: 64  NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAV 123

Query: 182 P--LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
               L+       ++ VSS     + L    E+          YA +K     LT   S 
Sbjct: 124 KRMALKHGGSGGAIVNVSSAA---SRLGAPGEY--------VDYAASKGAIDTLTTGLSL 172

Query: 240 MYKEKGIGFYSMHPGWAETPGVAK-SMPSFNERFAGNLR-----TSEEGADTVLWLALQP 293
               +GI    + PG+  T   A    P   +R   N+        EE A  ++WL L  
Sbjct: 173 EVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWL-LSD 231

Query: 294 KEKLVSGSF 302
           K   V+GSF
Sbjct: 232 KASYVTGSF 240

Length = 247

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 18/203 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++GK  +VTG N G+G   A  LA  GA + +        ET    +  K G +   ++
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDET--RRLIEKEGRKVTFVQ 69

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYT 175
           + DL+     +        +   + +LVNNAG +    L+    E +     +N+   Y 
Sbjct: 70  V-DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYH 128

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++++  ++ K     ++I ++S  M        L F  G F  +  Y  +K     LT+
Sbjct: 129 LSQAVAKVMAKQG-SGKIINIAS--M--------LSFQGGKF--VPAYTASKHGVAGLTK 175

Query: 236 KWSEMYKEKGIGFYSMHPGWAET 258
            ++       I   ++ PG+ +T
Sbjct: 176 AFANELAAYNIQVNAIAPGYIKT 198

Length = 258

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 42/264 (15%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNE-NVHL 116
           ++GK  +VTGA+ GIG A A+ LA+ GA V +   + KE+ E  +  I+S  G+  ++  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 117 ELCDLSSITEIKSFANRFSLKNKP----VHVLVNNAGVLENNRL--ITSEGFELNFAVNV 170
            L  L  +  + S  +   L+N+       +L+NNAG+     +   T + F+   +VN 
Sbjct: 62  NLESLHGVEALYSSLDN-ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
              + I +  +  L     ++R+I +SS                 S      Y+  K   
Sbjct: 121 KAPFFIIQQALSRLRD---NSRIINISSAATRI------------SLPDFIAYSMTKGAI 165

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAET------------PGVAKSMPSFNERFAGNLRT 278
             +T   ++    +GI   ++ PG+ +T               A ++ +FN      L  
Sbjct: 166 NTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNR-----LGE 220

Query: 279 SEEGADTVLWLALQPKEKLVSGSF 302
            E+ ADT  +LA  P  + V+G  
Sbjct: 221 VEDIADTAAFLA-SPDSRWVTGQL 243

Length = 252

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 58/258 (22%), Positives = 96/258 (37%), Gaps = 51/258 (19%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATV-YMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           GK  +V G + GIG A      + GA V +    SK+  E     +  +TG   V  +  
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAE----RLAQETGATAVQTDSA 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-------FAVNVLG 172
           D  ++ +          K+  + +LV NAG+      +  +  EL+       F +N+  
Sbjct: 62  DRDAVID-------VVRKSGALDILVVNAGI-----AVFGDALELDADDIDRLFKINIHA 109

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            Y    + V    +     R+I + S           +  +     GM  YA +K     
Sbjct: 110 PY---HASVEAARQMPEGGRIIIIGS-----------VNGDRMPVAGMAAYAASKSALQG 155

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAET---PG---VAKSMPSFN--ERFAGNLRTSEEGAD 284
           +    +  +  +GI    + PG  +T   P    +   M SF   +R        EE A 
Sbjct: 156 MARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHG----RPEEVAG 211

Query: 285 TVLWLALQPKEKLVSGSF 302
            V WLA  P+   V+G+ 
Sbjct: 212 MVAWLA-GPEASFVTGAM 228

Length = 237

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 4/116 (3%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             +  VV G    +G     GLA  G  V +   + EK       I ++ G    +    
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS---EGFELNFAVNVLG 172
           D +S   + + +         V +LV NAG+ +    IT      F+ +  VN++G
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF-ITDFQLGDFDRSLQVNLVG 115

Length = 259

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
             + GK  +VTG    IG A A  L + GA V +V    + G    +++      E    
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARF 56

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA 148
              D++    I+        +   V +LVN A
Sbjct: 57  IATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 3/127 (2%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA   IG A AE LA+ G  V +     E     L    +   N  V ++  DLS  
Sbjct: 4   LVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQ-ADLSDF 62

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGV-LENNRLITSEG-FELNFAVNVLGTYTITESMVP 182
                             VLVNNA           SE  +   F +N+   Y + ++   
Sbjct: 63  AACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFAR 122

Query: 183 LLEKAAP 189
            L  +  
Sbjct: 123 RLAGSRN 129

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTG 110
                  + GK  VVTGA AG+G A A GLA  GATV +    S       L  IR+   
Sbjct: 3   RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGA 62

Query: 111 NENVHL-ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFA 167
                  ++   ++  E+ + A         + ++VNNAG+  +  L  ++ E ++   A
Sbjct: 63  KAVAVAGDISQRATADELVATAVGLG----GLDIVVNNAGITRDRMLFNMSDEEWDAVIA 118

Query: 168 VNVLGTYTIT 177
           V++ G + +T
Sbjct: 119 VHLRGHFLLT 128

Length = 306

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 42.5 bits (101), Expect = 8e-05
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLS 122
           ++TG   G+G A A  LA RGA  + ++ RS      A + +         V +  CD++
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVA 63

Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
               + +          P+  +++ AGVL++  L  +T E F    A    G 
Sbjct: 64  DRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGA 116

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++G+  ++TG  +G+G A  E   + GA V ++ RS EK    ++ +R+  G+  V +E
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGDAVVGVE 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT-------SEGFELNFAVNV 170
             D+ S+ + +    R   +   +   + NAG+ + +  +         E F+  F +NV
Sbjct: 57  -GDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINV 115

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
            G     ++ +P L        + TVS+ G Y  
Sbjct: 116 KGYILGAKAALPALYATEGSV-IFTVSNAGFYPG 148

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 5/137 (3%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHLELCDLSS 123
           +VTGA+ GIG A A  LA+ G  + +   S     E+ +SAI+++ G  N  L   D++ 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG--NARLLQFDVAD 59

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMV 181
               ++       ++   + +V NAG+  +     ++ E +++    N+ G Y +     
Sbjct: 60  RVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119

Query: 182 PLLEKAAPDARVITVSS 198
             + +A    R+IT++S
Sbjct: 120 MPMIRARQGGRIITLAS 136

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 19/54 (35%), Positives = 33/54 (61%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG 110
            R+ GK  ++TGA++GIG A A+  A  GA V +  R + + +  ++ IR++ G
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG 55

Length = 254

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)

Query: 65  VVTGANAGIGYATAEGLASR-GATVYMVCRS-----KEKGETALSAIRSKTGN-ENVHLE 117
           +VTG   GIG A A  LA R GA + ++ RS     +E     L+A+ +       +  +
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 118 LCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTY 174
           + D +++   ++    R+      +  +++ AGVL +  L   T+E FE   A  V G  
Sbjct: 269 VTDAAAVRRLLEKVRERYG----AIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLL 324

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            + +          P    +  SS
Sbjct: 325 NLAQ-----ALADEPLDFFVLFSS 343

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 38/236 (16%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHLE 117
           + GK  +VTGA+ GIG A A+ LA +GA V +  R  +  +    AI +  G  E +   
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 118 LCDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLEN----NRLITSEG-FELNFAVNVL 171
           + ++  I  +      R       + +LVNNA    N    + L T  G F+    VN+ 
Sbjct: 66  IGEMEQIDALFAHIRERHG----RLDILVNNAAA--NPYFGHILDTDLGAFQKTVDVNIR 119

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G + ++     L+++    + V   S  G+           + G F G+  Y+  K   +
Sbjct: 120 GYFFMSVEAGKLMKEQGGGSIVNVASVNGV-----------SPGDFQGI--YSITKAAVI 166

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVL 287
           ++T+ +++     GI   ++ PG  +T            +FA  L  ++      L
Sbjct: 167 SMTKAFAKECAPFGIRVNALLPGLTDT------------KFASALFKNDAILKQAL 210

Length = 252

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            K  ++TGA +G G   A  LA +G  V    +   +    ++A+R++     + L +  
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQ----VTALRAEAARRGLALRVEK 57

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           L    ++    +R       V VL+NNAG+ E   +  I  E     F  NV G   +T+
Sbjct: 58  L----DLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQ 113

Query: 179 SMVPLLEKAAPDARVITVSSGGMYT 203
             V  +        V T S  G+ T
Sbjct: 114 GFVRKMVARGKGKVVFTSSMAGLIT 138

Length = 257

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TGA+ GIG A A  LA    T+ +  R  E+ +   + +   T      ++L D  +I
Sbjct: 7   LITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAELPGATP---FPVDLTDPEAI 62

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITESMVP 182
                 A     +   + VLV+NAGV +   +  S  + +     VNV+    +T  ++P
Sbjct: 63  ------AAAVE-QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLP 115

Query: 183 LLEKAAPDARVITVSSGGMYTAH 205
            L  A     V+ ++SG    A+
Sbjct: 116 ALRAA--HGHVVFINSGAGLRAN 136

Length = 227

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 25/234 (10%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTG   GIG A  + LA  G  V   C   E+   A    +   G +   +   D+SS  
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD-FRVVEGDVSSFE 63

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGFELNFAVNVLGTYTITESMVP- 182
             K+   +   +  P+ VLVNNAG+  +   + +T E +      N+   + +T+ ++  
Sbjct: 64  SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDG 123

Query: 183 LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK 242
           + E+     R+I +SS           +    G F G   Y+  K   +  T+  ++   
Sbjct: 124 MRERGW--GRIINISS-----------VNGQKGQF-GQTNYSAAKAGMIGFTKALAQEGA 169

Query: 243 EKGIGFYSMHPGWAETPGVAKSMPS--FNERFA----GNLRTSEEGADTVLWLA 290
            KG+   ++ PG+  T  V  +M     N   A    G L   EE A  V +LA
Sbjct: 170 TKGVTVNTISPGYIATDMV-MAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLA 222

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-----KGE--TALSAIRSKTGNEN 113
           GK   +TGA+ GIG A A   A  GA V +  ++ E      G   TA   I    G + 
Sbjct: 3   GKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIE-AAGGKA 61

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVL 171
           +   + D+    ++++   +   K   + +LVNNA    L        + ++L   VN  
Sbjct: 62  LPC-IVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTR 120

Query: 172 GTYTITESMVPLLEKAAPDARVITVS 197
           GTY  +++ +P L+K + +  ++ +S
Sbjct: 121 GTYLCSKACLPYLKK-SKNPHILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTG   GIG +        GA V +V    + G+    ++  +      H  
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFH-- 72

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV----LENNRLITSEGFELNFAVNVLGT 173
            CD++   ++    +    K   + ++VNNAG+      + R +    FE  F VNV G 
Sbjct: 73  -CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGV 131

Query: 174 Y 174
           +
Sbjct: 132 F 132

Length = 280

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 11/96 (11%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
                + GK  +VTG   GIG AT   L   GA V    RS           R     E 
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEG 50

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
           V     DL++     + A     +   V +LV+  G
Sbjct: 51  VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLG 86

Length = 260

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI--RSKTGNE 112
           M   + G   V+TGA++GIG ATAE  A RGA + +  R     E AL A+    +    
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAAR----DEEALQAVAEECRALGA 56

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
            V +   D++   ++K+ A + +     + V VNN GV
Sbjct: 57  EVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS 103
           G   +V GA  G+G   A+   + GA V +  RS EK E A  
Sbjct: 135 GDTVLVLGA-GGVGLLAAQLAKAAGARVIVTDRSDEKLELAKE 176

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              ++TG ++GIG A A+   + G  V+   R  E  E AL+A     G   V L   D+
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALAA----AGFTAVQL---DV 53

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITES 179
           +    +   A     ++  + VL+NNAG      L+    E     F  NV     +T +
Sbjct: 54  NDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRA 113

Query: 180 MVPLLEKA 187
           + PLL ++
Sbjct: 114 LFPLLRRS 121

Length = 274

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  ++TGA+ GIG A A  LA  GA + +  R++ +  +    +    G E + +   D
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-HGGEALVV-PTD 58

Query: 121 LSSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGT 173
           +S        I++   RF      + +LVNNAG+   +R   L     FE    VN LG 
Sbjct: 59  VSDAEACERLIEAAVARFG----GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGA 114

Query: 174 YTITESMVPLLEKAAPDARVITVSS 198
              T + +P L   A   +++ VSS
Sbjct: 115 VYCTHAALPHL--KASRGQIVVVSS 137

Length = 263

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 20/90 (22%), Positives = 40/90 (44%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  ++TGA   IG A  + +   G  V      KE     L ++  +  ++ + L  
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNA 148
            D++    ++ F ++ + K   +   VN A
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 17/156 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++G+  +VTG  +G+G A  +   + GA V ++ +S       L  + +  G+  V +E
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAG----LQELEAAHGDAVVGVE 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---------LENNRLITSEGFELNFAV 168
             D+ S+ + K    R       +  L+ NAG+         + ++R+   E F+  F +
Sbjct: 58  -GDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRI--DEAFDEVFHI 114

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA 204
           NV G     ++ +P L  A+  + + T+S+ G Y  
Sbjct: 115 NVKGYLLAVKAALPAL-VASRGSVIFTISNAGFYPN 149

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE--TALSAIRSKTGNENVHLE 117
             K  ++TG ++G G A A+   + G  V    RS+       AL         +     
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP-------DRALAR 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG-----VLENNRLITSEGFELN--FAVNV 170
           L D++    I +          P+ VLVNNAG      +E      S   E+   F VNV
Sbjct: 56  LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEE-----SPLAEMRRQFEVNV 110

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSS-GGMYT 203
            G   +T++++P + +A     ++ ++S GG+ T
Sbjct: 111 FGAVAMTKAVLPGM-RARRRGHIVNITSMGGLIT 143

Length = 277

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 21/200 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             +  VV G    +G     GLA  G  V +   + E  E     I ++ G +       
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFG-A 59

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS---EGFELNFAVNVLGTYTI 176
           D ++   + + +       K V +LV +AG+ ++ + IT      F+ +  VN++G +  
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK-ITDFELGDFDRSLQVNLVGYFLC 118

Query: 177 TESMVPLLEKAAPDARVITVS--SGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
                 L+ +     R+I ++  SG + + H       NSG       Y+  K   V LT
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSGKVGSKH-------NSG-------YSAAKFGGVGLT 164

Query: 235 EKWSEMYKEKGIGFYSMHPG 254
           +  +    E GI   S+  G
Sbjct: 165 QSLALDLAEHGITVNSLMLG 184

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G+  +VTG   GIG   A    + GATV +VC  +                        D
Sbjct: 6   GRVVLVTGGTRGIGAGIARAFLAAGATV-VVCGRRAPETVDGRP---------AEFHAAD 55

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAG 149
           +    ++ +  +    ++  + VLVNNAG
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAG 84

Length = 252

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R EGK  VVTGA  GIG   AE LA  GA V +V RS E     L+ I +       H+ 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAAGD--AAHVH 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
             DL +    +        +   V VL+NN G
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVG 89

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA-IRSKTGNENVHLELCDLSSI 124
           +TGA  G+G A A  +A +GA V++   +   G  A +A I +  G       + D++  
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDE 63

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGTYTITESMVP 182
            + ++   + +     + VLVNNAGV        I  + +    A+NV   +   +  +P
Sbjct: 64  AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALP 123

Query: 183 LLEKAAPDARVITVSS 198
            L  + P A ++ +SS
Sbjct: 124 YLRASQP-ASIVNISS 138

Length = 251

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 14/202 (6%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK  ++TGA+ GIG   A      GA V +  R  +  E     I   +G + V +  
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI-GTSGGKVVPVC- 64

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT--SEGFELNFAVNVLGTYTI 176
           CD+S   ++ S  ++ + +   + + V NAG++    ++    E F+     NV G +  
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLT 124

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
            ++    + K      +I  +S    + H+ +  +        +  Y  +K   + LT+ 
Sbjct: 125 AQAAAKAMVKQGQGGVIINTAS---MSGHIINVPQ-------QVSHYCASKAAVIHLTKA 174

Query: 237 WSEMYKEKGIGFYSMHPGWAET 258
            +       I   S+ PG+  T
Sbjct: 175 MAVELAPHKIRVNSVSPGYILT 196

Length = 253

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 61/262 (23%), Positives = 96/262 (36%), Gaps = 59/262 (22%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  VV+G   G+G   A   A  GA V +  R+ E+ +   + I    G   + +   
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-LGRRALAVP-- 60

Query: 120 DLSSITEIKSFAN-------RFSLKNKPVHVLVNNA------GVLENNRLITSEGFELNF 166
             + IT+    AN       RF      V  LVNNA        L +        +    
Sbjct: 61  --TDITDEDQCANLVALALERFG----RVDALVNNAFRVPSMKPLAD---ADFAHWRAVI 111

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
            +NVLGT  +T++  P L ++     ++ ++S  M   H          S      Y   
Sbjct: 112 ELNVLGTLRLTQAFTPALAES--GGSIVMINS--MVLRH----------SQPKYGAYKMA 157

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGW-------------AETPGVAKSMPSFNERFA 273
           K   +A ++  +     +GI   S+ PG+             A   GV  ++       A
Sbjct: 158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGV--TVEQIYAETA 215

Query: 274 -----GNLRTSEEGADTVLWLA 290
                  L T +E A  VL+LA
Sbjct: 216 ANSDLKRLPTDDEVASAVLFLA 237

Length = 258

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 24/209 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHL 116
            ++G+   VTGA +GIG   A GLA  GA V +     + G       I +  G   + +
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-AGRRAIQI 63

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGFELNFAVNVLGTY 174
              D++S  ++++   R   +   + + VN AG+   N    +  E ++    +N+ G +
Sbjct: 64  A-ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVF 122

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF--DGMEQ--YARNKRVQ 230
              ++          +AR +  + GG        ++   SG     G+ Q  Y  +K   
Sbjct: 123 LSCQA----------EARAMLENGGGSIV-----NIASMSGIIVNRGLLQAHYNASKAGV 167

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           + L++  +  +  +GI   S+ PG+  TP
Sbjct: 168 IHLSKSLAMEWVGRGIRVNSISPGYTATP 196

Length = 254

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNEN 113
           M + +EGK  V+TG + G+G A A       A V +  RS E+        I+ K G E 
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIK-KAGGEA 59

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLEN 153
           + ++  D++  +++ +       +   + V++NNAG+ EN
Sbjct: 60  IAVK-GDVTVESDVVNLIQTAVKEFGTLDVMINNAGI-EN 97

Length = 261

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 25/224 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            K   +TGA++G G    E L +RG  V    R  +    AL  ++++ G + + +   D
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPD----ALDDLKARYG-DRLWVLQLD 56

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLGTYTITE 178
           ++    +++  +R       + V+V+NAG  +      ++          N++G+  +  
Sbjct: 57  VTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR 116

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           + +P L +     R++ VSS G   A+    L   +    G+E +      +VA      
Sbjct: 117 AALPHL-RRQGGGRIVQVSSEGGQIAYPGFSLYHATKW--GIEGFVEAVAQEVAPF---- 169

Query: 239 EMYKEKGIGFYSMHPGWAET---PGV--AKSMPSFNERFAGNLR 277
                 GI F  + PG A T    G+     + ++++   G+LR
Sbjct: 170 ------GIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLR 207

Length = 276

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI-RSKTGNENVHLELCDLSS 123
            +TGA++GIG A A   A +GAT+ +V R  +    AL A          V +   D+  
Sbjct: 6   FITGASSGIGQALAREYARQGATLGLVARRTD----ALQAFAARLPKAARVSVYAADVRD 61

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG-----FELNFAVNVLGT 173
              + + A  F   +    V++ NAG+  +   +T E      F      N  G 
Sbjct: 62  ADALAAAAADFIAAHGLPDVVIANAGI--SVGTLTEEREDLAVFREVMDTNYFGM 114

Length = 257

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 23/157 (14%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M A I     ++TGA   IG A A  L ++G  V +  R+       L     + G + +
Sbjct: 1   MPAPI-----LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGL----RQAGAQCI 51

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLG 172
                D S+   I +F +        +  +++NA   + E      ++       ++V  
Sbjct: 52  Q---ADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNA 108

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD 209
            Y +  ++  LL      A  I          H+TD 
Sbjct: 109 PYLLNLALEDLLRGHGHAASDII---------HITDY 136

Length = 236

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 6/146 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHL 116
              GK  +VTG++ GIG A A  LA  G  + +   RS++  E     I +  G + + +
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAV 59

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA--GVLENNRLITSEGFELNFAVNVLGTY 174
           +  ++  + +IK    +   +   + V VNNA  GVL     +    ++    +N     
Sbjct: 60  K-ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALL 118

Query: 175 TITESMVPLLEKAAPDARVITVSSGG 200
              +    L+EK     ++I++SS G
Sbjct: 119 FCAQEAAKLMEKVG-GGKIISLSSLG 143

Length = 250

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 64  CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
             V GA  G+G A A   A+ G +V +  R + K E  L  I    G     +   D   
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVP-TDARD 60

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAG------VLENNRLITSEGFELNFAVNVLG 172
             E+ +  +    +  P+ VLV NAG      +LE     T   FE  + +   G
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILE----TTPRVFEKVWEMAAFG 111

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 30/173 (17%), Positives = 49/173 (28%), Gaps = 49/173 (28%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
            V GA    G    + L +RG  V  + R+            SK     V     DL  +
Sbjct: 2   AVIGATGKTGRRLVKELLARGHQVTALSRNP-----------SKAPAPGVTPVQKDLFDL 50

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
            ++             V  +V+  G   ++                       + +  LL
Sbjct: 51  ADLAEA-------LAGVDAVVDAFGARPDDS----------------------DGVKHLL 81

Query: 185 E--KAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           +    A   R++ VS+ G+Y          +           YAR K     L
Sbjct: 82  DAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPL-----FPPYARAKAAAEEL 129

Length = 182

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  VVTG + G+G   A GLA  G  +  +    E  ET      +  G   + L  
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV-EPTETI--EQVTALGRRFLSLT- 63

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI 157
            DL  I  I +   R   +   + +LVNNAG++     I
Sbjct: 64  ADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI 102

Length = 253

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK    T ++ GIG+  A  LA  GA V ++ R++E  + A   I+S++ N +V   +
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIV 64

Query: 119 CDLSSITEIK 128
            DL+   +++
Sbjct: 65  ADLTKREDLE 74

Length = 263

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 63  NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           N +VT ++ GIG+  A  L  +GA V +  R++E  E AL  ++       V  +L D
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSD 59

Length = 259

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 16/131 (12%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           + GA  GIG A A  LA RG  + +  R       AL+ + ++ G         D+++  
Sbjct: 3   ILGATGGIGRALARALAGRGWRLLLSGRD----AGALAGLAAEVGALAR---PADVAAEL 55

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTITESMVPL 183
           E+ + A        P+ +LV  AG +    L  ++          N+ G   + +  + L
Sbjct: 56  EVWALAQELG----PLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALAL 111

Query: 184 LEKAAPDARVI 194
           L   A  AR++
Sbjct: 112 L---AAGARLV 119

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 63/259 (24%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV------------CRSKEKGETALSAI 105
           +++GK  ++TG ++GIG A A   A  GA + +V             R +++G   L  I
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCL-LI 101

Query: 106 RSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN---RLITSEGF 162
                +E      C  +    ++            + +LVNNA           IT+E  
Sbjct: 102 PGDVSDE----AFCKDAVEETVRELGR--------LDILVNNAAFQYPQQSLEDITAEQL 149

Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME- 221
           +  F  N+   + +T++ +P L+     + +I                  N+GS  G E 
Sbjct: 150 DKTFKTNIYSYFHMTKAALPHLK---QGSAII------------------NTGSITGYEG 188

Query: 222 -----QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL 276
                 Y+  K    A T   ++   +KGI   ++ PG   TP +               
Sbjct: 189 NETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEK------- 241

Query: 277 RTSEEGADTVLWLALQPKE 295
             S+ G++T +    QP+E
Sbjct: 242 -VSQFGSNTPMQRPGQPEE 259

Length = 290

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 53  EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG 110
           E M   ++GK  VV G    +G   A  LA  GA V +V R  E+ + A  ++R++ G
Sbjct: 20  ELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG 77

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI 105
           M+ ++ GK  +VTG   GIG  TA  LA +GA V +    +E G+  +  I
Sbjct: 10  MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60

Length = 169

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07041	230	short chain dehydrogenase; Provisional	99.98
PRK09135	249	pteridine reductase; Provisional	99.98
PRK06482	276	short chain dehydrogenase; Provisional	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.98
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02650	351	dihydroflavonol-4-reductase	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.83
PLN00198	338	anthocyanidin reductase; Provisional	99.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.81
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.79
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.79
PLN02686	367	cinnamoyl-CoA reductase	99.79
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.77
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.76
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.75
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.72
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.71
PLN02427	386	UDP-apiose/xylose synthase	99.71
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.68
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.68
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.67
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.67
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.66
PLN02260	668	probable rhamnose biosynthetic enzyme	99.65
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.64
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.64
PLN02206	442	UDP-glucuronate decarboxylase	99.63
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.61
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.6
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.6
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.6
CHL00194	317	ycf39 Ycf39; Provisional	99.58
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.58
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.51
PRK07201	657	short chain dehydrogenase; Provisional	99.5
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.5
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.48
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.46
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.45
PRK05865	854	hypothetical protein; Provisional	99.43
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.43
PLN02996	491	fatty acyl-CoA reductase	99.43
PLN02778	298	3,5-epimerase/4-reductase	99.43
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.35
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.31
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.3
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.27
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.27
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.26
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.25
PLN02503	605	fatty acyl-CoA reductase 2	99.24
PLN00016	378	RNA-binding protein; Provisional	99.23
PRK08309	177	short chain dehydrogenase; Provisional	99.2
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.17
PLN02260	668	probable rhamnose biosynthetic enzyme	99.17
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.14
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.14
PRK12320	699	hypothetical protein; Provisional	99.11
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.88
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.86
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.7
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.64
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.62
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.54
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.46
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.4
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.37
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.36
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.27
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.27
PLN00106	323	malate dehydrogenase	98.22
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.18
COG2910	211	Putative NADH-flavin reductase [General function p	98.16
PTZ00325	321	malate dehydrogenase; Provisional	98.14
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.14
PRK09620	229	hypothetical protein; Provisional	98.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.08
PRK14982	340	acyl-ACP reductase; Provisional	98.02
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.87
KOG2774	366	consensus NAD dependent epimerase [General functio	97.86
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.85
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.8
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.77
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.75
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.71
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.71
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.7
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.66
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.64
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.62
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.61
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.58
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.57
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.57
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.54
PRK05086	312	malate dehydrogenase; Provisional	97.47
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.46
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.46
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.44
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.43
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.42
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.4
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.39
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.39
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.36
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.35
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.3
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.3
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.29
PRK08223	287	hypothetical protein; Validated	97.27
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.25
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.25
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.24
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.24
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.24
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.23
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.21
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.2
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.2
PRK06849	389	hypothetical protein; Provisional	97.18
COG3268	382	Uncharacterized conserved protein [Function unknow	97.14
PRK08328	231	hypothetical protein; Provisional	97.13
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.1
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.08
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.07
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.07
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.07
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.06
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.02
PTZ00117	319	malate dehydrogenase; Provisional	97.01
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.01
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.0
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.99
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.98
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.98
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.93
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.91
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.89
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.88
PRK07877	722	hypothetical protein; Provisional	96.88
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.87
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.85
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.83
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.82
PRK14968	188	putative methyltransferase; Provisional	96.82
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.81
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.78
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.76
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.74
PRK07411	390	hypothetical protein; Validated	96.73
PRK14851	679	hypothetical protein; Provisional	96.73
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.71
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.7
PLN02602	350	lactate dehydrogenase	96.68
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.66
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.62
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.61
PRK14852	989	hypothetical protein; Provisional	96.61
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.61
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.59
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.59
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.58
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.58
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.57
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.54
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.53
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.53
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.53
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.5
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.49
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.49
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.49
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.49
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.48
PRK06223	307	malate dehydrogenase; Reviewed	96.45
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.41
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.39
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
PLN00203	519	glutamyl-tRNA reductase	96.36
PRK09496	453	trkA potassium transporter peripheral membrane com	96.36
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.36
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.35
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.33
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.29
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.24
PRK04148	134	hypothetical protein; Provisional	96.22
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.22
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.21
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.2
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.17
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.12
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.11
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.11
PRK08655	437	prephenate dehydrogenase; Provisional	96.05
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.03
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.02
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.0
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.99
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.98
PRK05442	326	malate dehydrogenase; Provisional	95.95
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.95
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.94
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.86
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.85
PRK12480	330	D-lactate dehydrogenase; Provisional	95.85
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.83
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.81
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.8
PLN02928	347	oxidoreductase family protein	95.79
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.75
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.75
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.74
PLN02740	381	Alcohol dehydrogenase-like	95.73
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.73
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.73
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.72
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.7
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.69
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.68
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.67
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.66
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.65
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.6
PRK09496	453	trkA potassium transporter peripheral membrane com	95.59
PRK13243	333	glyoxylate reductase; Reviewed	95.58
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.58
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.56
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.54
PTZ00354	334	alcohol dehydrogenase; Provisional	95.54
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.51
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.51
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.49
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.49
PLN02494	477	adenosylhomocysteinase	95.42
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.39
TIGR03736	244	PRTRC_ThiF PRTRC system ThiF family protein. A nov	95.38
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.37
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.36
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.33
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.31
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.3
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.29
PRK06487	317	glycerate dehydrogenase; Provisional	95.29
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.28
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.26
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.24
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.24
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.22
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.22
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.16
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.14
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.12
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.08
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.08
PLN02827	378	Alcohol dehydrogenase-like	95.08
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.07
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.06
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.05
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.01

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2e-44  Score=306.53  Aligned_cols=225  Identities=24%  Similarity=0.334  Sum_probs=196.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++|||||||||.++|++|++.|++|++++|+.++++++.+++.+    ..+..+..|++|.++++.+++.+.+.+
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            6789999999999999999999999999999999999999999888754    468899999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||.....+.  .+.++|++++++|+.|.++.+++++|.|.++ +.|.||++||.++.            .+
T Consensus        80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~------------~~  146 (246)
T COG4221          80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGR------------YP  146 (246)
T ss_pred             CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecccccc------------cc
Confidence            999999999999876443  6889999999999999999999999999988 67899999999988            46


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chh---HHHH-H-hccCCCHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPS---FNER-F-AGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~---~~~~-~-~~~~~~~~e~A~~v~~l~  290 (339)
                      +++...|+++|+++.+|++.|+.|+..++|||..|+||.|.|..+... .+.   ..+. . .....+|+|+|++|+|.+
T Consensus       147 y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~  226 (246)
T COG4221         147 YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAA  226 (246)
T ss_pred             CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999977544332 221   1111 1 234689999999999999


Q ss_pred             ccCCCCCCCc
Q 019551          291 LQPKEKLVSG  300 (339)
Q Consensus       291 s~~~~~~~~G  300 (339)
                      +.|..-.++.
T Consensus       227 ~~P~~vnI~e  236 (246)
T COG4221         227 TQPQHVNINE  236 (246)
T ss_pred             hCCCccccce
Confidence            9877544443

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=7.7e-45  Score=295.15  Aligned_cols=237  Identities=24%  Similarity=0.296  Sum_probs=207.5

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++.|.++||||++|||+++++.|+++|++|++.+++.+..++....+...   ..-..+.||+++.++++..+++..+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k   86 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEK   86 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999988777777666432   2456788999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .+|++++||||||+..+...  ...++|++.+++|+.|.|+++|++.+.|...+ .+.+|||+||.-+..          
T Consensus        87 ~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki----------  156 (256)
T KOG1200|consen   87 SLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI----------  156 (256)
T ss_pred             hcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc----------
Confidence            99999999999999987765  58899999999999999999999999854433 456999999998874          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                        +..++..|++||+++.+|+|+.|+|++++|||||.|.||++.|||.....+...+.     |+++++.+||+|+.++|
T Consensus       157 --GN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~f  234 (256)
T KOG1200|consen  157 --GNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLF  234 (256)
T ss_pred             --ccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHH
Confidence              34678899999999999999999999999999999999999999998877765554     46899999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+...++++..+-++||.
T Consensus       235 LAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  235 LASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             HhccccccccceeEEEeccc
Confidence            99877777777777788874

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=6.3e-44  Score=312.21  Aligned_cols=224  Identities=23%  Similarity=0.314  Sum_probs=201.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+++++|||||+|||+++|++|+++|++|++++|++++++++.+++...+ +..+.++.+|+++++++..+.+++.+.+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            568999999999999999999999999999999999999999999999887 4689999999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +.||+||||||+...+.+  .++++.++++++|+.++..|+++++|.|.++ +.|.||||+|.+++.            +
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~------------p  149 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLI------------P  149 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcC------------C
Confidence            999999999999887754  7889999999999999999999999999988 789999999999984            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      .|..+.|++||+++.+|+++|+.|++++||+|.+|+||+|.|++.+.. .......+...+.+|+++|+..++.+.....
T Consensus       150 ~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         150 TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCCc
Confidence            688999999999999999999999999999999999999999998622 2222222345678999999999999875444


Q ss_pred             C
Q 019551          296 K  296 (339)
Q Consensus       296 ~  296 (339)
                      .
T Consensus       230 ~  230 (265)
T COG0300         230 E  230 (265)
T ss_pred             e
Confidence            3

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-42  Score=312.54  Aligned_cols=274  Identities=32%  Similarity=0.501  Sum_probs=234.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+++++||||++|||+++|++|+++|++|++.+|+.++.+++.+++.+..+...+.++.+|+++.++|++++++++..
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999999999999999999998777788999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC--C
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS--G  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~--~  215 (339)
                      ++++|+||||||++.+....+.|.+|..|.+|++|+|+|++.++|.|+++ .++|||++||..+ ...++.++....  .
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~vsS~~~-~~~~~~~~l~~~~~~  189 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVNVSSILG-GGKIDLKDLSGEKAK  189 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEEEcCccc-cCccchhhccchhcc
Confidence            99999999999999988878889999999999999999999999999987 4499999999887 222222222222  2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHHHHh-ccCCCHHHHHHHHHHHhc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNERFA-GNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~-~~~~~~~e~A~~v~~l~s  291 (339)
                      .+....+|+.||.++..+++.|++.+.+ ||.+++++||.|.|+...+..   ........ ....++++.|+++++++.
T Consensus       190 ~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~  268 (314)
T KOG1208|consen  190 LYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAAL  268 (314)
T ss_pred             CccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhcc
Confidence            2566668999999999999999999987 999999999999999544421   11222222 234699999999999999


Q ss_pred             cCCCCCCCcceeeCCCCCCcccccccccCCHHHHHHHHHHHHhhhcC
Q 019551          292 QPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      +|+....+|.|+-||.+...    .....+++..++||+..+++++.
T Consensus       269 ~p~~~~~sg~y~~d~~~~~~----~~~a~d~~~~~~lw~~s~~l~~~  311 (314)
T KOG1208|consen  269 SPELEGVSGKYFEDCAIAEP----SEEALDEELAEKLWKFSEELIDE  311 (314)
T ss_pred             CccccCcccccccccccccc----ccccCCHHHHHHHHHHHHHHhhh
Confidence            99988999999999997666    33778999999999999998763

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-43  Score=313.75  Aligned_cols=237  Identities=20%  Similarity=0.231  Sum_probs=199.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|+++++++++++. .
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            4789999999999999999999999999999999999998888887776543 3468899999999999999999986 5


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.++|++.+++|+.+++.++++++|+|+++ +.|+||++||.++.            .
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~~~------------~  149 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVAIK------------E  149 (263)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCcccc------------C
Confidence            899999999999865443  36789999999999999999999999999876 56899999998876            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHH-----HHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNE-----RFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~-----~~~~~~~~~  279 (339)
                      +.++...|+++|+|+++|+++++.|++++|||||+|+||+|+|++.....           ++..+     .+.+++.+|
T Consensus       150 ~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  229 (263)
T PRK08339        150 PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEP  229 (263)
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCH
Confidence            46778899999999999999999999999999999999999999754211           11111     134678899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +|+|++++||+++.....++..+.+|||..
T Consensus       230 ~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        230 EEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             HHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence            999999999998655544444556798853

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-43  Score=321.43  Aligned_cols=264  Identities=17%  Similarity=0.150  Sum_probs=210.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc----------hhHHHHHHHHHhhcCCccEEEEeccCCCHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK----------EKGETALSAIRSKTGNENVHLELCDLSSITE  126 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~  126 (339)
                      .+++||+++||||++|||+++|++|++.|++|++++|+.          +++++..+++...  +.++.++.+|++|+++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence            457899999999999999999999999999999999984          4555555555433  3467889999999999


Q ss_pred             HHHHHHHHhcCCCCccEEEEcc-cccc------CCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          127 IKSFANRFSLKNKPVHVLVNNA-GVLE------NNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       127 v~~~~~~~~~~~~~id~lInnA-G~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ++++++++.+.++++|+||||| |...      +....+.++|++++++|+.+++.++++++|+|.++ ++|+||++||.
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~isS~  160 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEECCc
Confidence            9999999999999999999999 8531      11225678899999999999999999999999766 46899999996


Q ss_pred             cccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---h-hH----HHH
Q 019551          200 GMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---P-SF----NER  271 (339)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~-~~----~~~  271 (339)
                      .+....         .+.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....   + ..    ...
T Consensus       161 ~~~~~~---------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  231 (305)
T PRK08303        161 TAEYNA---------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKE  231 (305)
T ss_pred             cccccC---------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccc
Confidence            553210         123456789999999999999999999999999999999999999753211   1 11    111


Q ss_pred             H-hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCCcccccccccCCHHHHHHHHHHHHhhh
Q 019551          272 F-AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMA  336 (339)
Q Consensus       272 ~-~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  336 (339)
                      + .++..+|+|+|+.++||++++...+++|+++.|+.....+.    ...+.+...+||+.++++-
T Consensus       232 p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  293 (305)
T PRK08303        232 PHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQLARVYG----FTDLDGSRPDAWRYLVEVQ  293 (305)
T ss_pred             cccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHHHhcC----ccCCCCCCCcchhhhhhcc
Confidence            2 35567899999999999987655577899999887654432    3345567789999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-42  Score=312.29  Aligned_cols=233  Identities=17%  Similarity=0.237  Sum_probs=190.0

Q ss_pred             ccCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++||++|||||++  |||+++|++|+++|++|++++|+.+..++ .+++.+..+  ...++.+|++|.++++++++++.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g--~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLG--SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcC--CceEEeCCCCCHHHHHHHHHHHH
Confidence            37899999999996  99999999999999999999998643333 344433322  23568899999999999999999


Q ss_pred             cCCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.+|++|+||||||+....      ...+.++|++++++|+.+++.++|+++|+|.+   +|+||++||.++.       
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~-------  150 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGST-------  150 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCcc-------
Confidence            9999999999999986431      23678999999999999999999999999962   4899999998775       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~-----~~~~~~~~~~~e~  282 (339)
                           .+.+++..|++||+|+.+|+++|+.|++++|||||+|+||+++|++.....+.  ..     ..+.+++.+|+|+
T Consensus       151 -----~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  225 (271)
T PRK06505        151 -----RVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEV  225 (271)
T ss_pred             -----ccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHH
Confidence                 24567889999999999999999999999999999999999999975422111  11     1234678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++||+++.....++..+.+|||.
T Consensus       226 a~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        226 GGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHHHhCccccccCceEEeecCCc
Confidence            99999999865554455555679985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-42  Score=309.11  Aligned_cols=232  Identities=18%  Similarity=0.234  Sum_probs=192.2

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|+ ++.++..+++.    ..++.++.+|++|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLV----DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence            44789999999999  899999999999999999999998 34444444442    235788999999999999999999


Q ss_pred             hcCCCCccEEEEccccccC------CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          135 SLKNKPVHVLVNNAGVLEN------NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      .+.++++|+||||||+..+      ....+.++|++.+++|+.+++.++++++|+|.+   +|+||++||.++.      
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~------  148 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSE------  148 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCcc------
Confidence            9999999999999998643      123678899999999999999999999999953   4899999998775      


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEE  281 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e  281 (339)
                            .+.+++.+|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  ++..+     .+.+++.+|+|
T Consensus       149 ------~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (252)
T PRK06079        149 ------RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEE  222 (252)
T ss_pred             ------ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHH
Confidence                  345678899999999999999999999999999999999999999764321  11111     13467899999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|++++||+++.....++..+.+|||.
T Consensus       223 va~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        223 VGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             HHHHHHHHhCcccccccccEEEeCCce
Confidence            999999999866555555555679873

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.8e-43  Score=307.49  Aligned_cols=224  Identities=28%  Similarity=0.303  Sum_probs=189.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.||+|+|||||+|||.++|++|+++|++++++.|+.+++++..+++++..+..+++++++|++|.++++++++++...
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999999999988776556999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.+++..+|++|++|+..++|+++|+|++++ .|+||++||.+++.            
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~------------  155 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM------------  155 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc------------
Confidence            9999999999999983332  56788889999999999999999999999984 79999999999984            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCC--eEEEEeeCCcccCCCccCcchhHHH-HHhccCCCHHHHHH--HHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKG--IGFYSMHPGWAETPGVAKSMPSFNE-RFAGNLRTSEEGAD--TVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~e~A~--~v~~l~  290 (339)
                      ++|..+.|++||+|+.+|+++|+.|+.+.+  |++ .|+||+|+|++.......... ........+++.+.  .+.+.+
T Consensus       156 ~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  234 (282)
T KOG1205|consen  156 PLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGKSQQGPFLRTEDVADPEAVAYAI  234 (282)
T ss_pred             CCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhccccccccccchhhhhhhhhHHHHHHHH
Confidence            467777999999999999999999999877  666 999999999976554322211 11122345566654  666666


Q ss_pred             ccCCC
Q 019551          291 LQPKE  295 (339)
Q Consensus       291 s~~~~  295 (339)
                      ..+..
T Consensus       235 ~~~~~  239 (282)
T KOG1205|consen  235 STPPC  239 (282)
T ss_pred             hcCcc
Confidence            65444

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-42  Score=310.87  Aligned_cols=233  Identities=17%  Similarity=0.201  Sum_probs=190.6

Q ss_pred             cCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+. . .++.+|++|.++++++++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            579999999997  89999999999999999999999853 33344444433332 3 5788999999999999999999


Q ss_pred             CCCCccEEEEccccccC----C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          137 KNKPVHVLVNNAGVLEN----N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~----~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      .++++|+||||||+...    .  ...+.++|++++++|+.++++++++++|+|.+   +|+||++||.++.        
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~--------  148 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGV--------  148 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCc--------
Confidence            99999999999998642    1  23678999999999999999999999999964   4899999998765        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--h---H--HHHHhccCCCHHHHH
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--S---F--NERFAGNLRTSEEGA  283 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~---~--~~~~~~~~~~~~e~A  283 (339)
                          .+.+++..|++||+|+.+|+++++.|++++||+||+|+||+|+|++.....+  .   .  ...+.+++.+|+|+|
T Consensus       149 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva  224 (274)
T PRK08415        149 ----KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVG  224 (274)
T ss_pred             ----cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHH
Confidence                2456778999999999999999999999999999999999999986542211  0   0  112457789999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +.++||+++.....++..+.+|||..
T Consensus       225 ~~v~fL~s~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        225 NSGMYLLSDLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HHHHHHhhhhhhcccccEEEEcCccc
Confidence            99999998655555555567799853

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-42  Score=307.38  Aligned_cols=238  Identities=24%  Similarity=0.301  Sum_probs=202.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888888865433457889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.++|++++++|+.+++.++++++|.|.++ +.++||++||..+.            .
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~  150 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAF------------K  150 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhc------------c
Confidence            999999999999865433  25788999999999999999999999999876 56899999998776            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hh-HHH-----HHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PS-FNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~-~~~-----~~~~~~~~~~e~A~  284 (339)
                      +.++..+|++||+|+++|+++++.|++++||+||+|+||+++|++.....     +. ...     .+.+++.+|+|+|+
T Consensus       151 ~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~  230 (260)
T PRK07063        151 IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAM  230 (260)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            45677899999999999999999999999999999999999999864321     11 111     13467889999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++||+++.....++..+.+|||.
T Consensus       231 ~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        231 TAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHcCccccccCCcEEEECCCe
Confidence            999999876655555555679984

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-41  Score=310.29  Aligned_cols=278  Identities=29%  Similarity=0.424  Sum_probs=222.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999988887766666789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .++++|+||||||+..... ..+.++++..+++|+.|++.+++.++|.|++.  .++||++||.++..+....++.....
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccc
Confidence            9999999999999876433 36789999999999999999999999999764  58999999988765433322222224


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHH--cCCCeEEEEeeCCcccCCCccCcc------hh----HHHHHh--c-cCCCHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMY--KEKGIGFYSMHPGWAETPGVAKSM------PS----FNERFA--G-NLRTSE  280 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~------~~----~~~~~~--~-~~~~~~  280 (339)
                      ++++...|+.||+|+..|++.|+.++  ...||+||+|+||+|+|++.....      +.    ....+.  . .+.+++
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence            56678899999999999999999864  457899999999999999864311      11    111111  1 246899


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCCCCc-----ccccccccCCHHHHHHHHHHHHhhhcC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAEAPK-----HLKFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      +.|.+.++++.++..  .+|.||.+++....     .........|++..++||+.++++++.
T Consensus       248 ~ga~~~l~~a~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~  308 (313)
T PRK05854        248 SAILPALYAATSPDA--EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGV  308 (313)
T ss_pred             HHHHHhhheeeCCCC--CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            999999999876654  36889887643211     111223347889999999999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-42  Score=305.14  Aligned_cols=235  Identities=18%  Similarity=0.276  Sum_probs=195.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+.  +.++.++.+|++++++++++++++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999998643  3333444332  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.+++.++++++|.|.+++.+|+||++||..+..            
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------  148 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------  148 (251)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------
Confidence            999999999999876543  357899999999999999999999999998764468999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......  ...     ..+.+++.+|+|+|++++|
T Consensus       149 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~  228 (251)
T PRK12481        149 GGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIF  228 (251)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            345667899999999999999999999999999999999999998654211  111     1234678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       229 L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        229 LSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HhCccccCcCCceEEECCCE
Confidence            99876666666666779873

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-41  Score=302.72  Aligned_cols=238  Identities=21%  Similarity=0.253  Sum_probs=200.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....  .++..+.+|++|+++++++++++.+.+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            679999999999999999999999999999999999988888887776542  467889999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||......  ..+.++|++.+++|+.+++.++++++|.|.+++.+++||++||..+...          ..
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~~  154 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII----------NV  154 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC----------CC
Confidence            99999999999875443  2578899999999999999999999999987645689999999876421          01


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----HHHhccCCCHHHHHHHHHHHhcc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----ERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      .+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...    ..+.+++.+|+|+|++++||+++
T Consensus       155 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~  234 (253)
T PRK05867        155 PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASE  234 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            12457899999999999999999999999999999999999998654322111    11346789999999999999987


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                      .....++..+.+|||.
T Consensus       235 ~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        235 ASSYMTGSDIVIDGGY  250 (253)
T ss_pred             ccCCcCCCeEEECCCc
Confidence            6655555666779984

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=304.05  Aligned_cols=232  Identities=14%  Similarity=0.177  Sum_probs=190.1

Q ss_pred             cCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||+++||||++  |||+++|++|+++|++|++++|+. +.++..+++.+..+.  ..++.+|++|+++++++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC--NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC--ceEEEccCCCHHHHHHHHHHHHH
Confidence            6799999999997  999999999999999999999883 445555666544332  24678999999999999999999


Q ss_pred             CCCCccEEEEccccccC------CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          137 KNKPVHVLVNNAGVLEN------NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      .++++|+||||||+...      ....+.++|++.+++|+.+++.++++++|+|++   +|+||++||.++.        
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~--------  151 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAE--------  151 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccc--------
Confidence            99999999999997542      123578999999999999999999999999953   4899999998765        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHH-----HHhccCCCHHHHH
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~-----~~~~~~~~~~e~A  283 (339)
                          .+.+++..|++||+|+++|+++++.|++++||+||+|+||+++|++....  .++..+     .+.+++.+|+|+|
T Consensus       152 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva  227 (260)
T PRK06603        152 ----KVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVG  227 (260)
T ss_pred             ----cCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHH
Confidence                24567789999999999999999999999999999999999999975321  111111     2456788999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||+++.....++..+.+|||-
T Consensus       228 ~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        228 GAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHhCcccccCcceEEEeCCcc
Confidence            9999999865554445556679883

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-41  Score=304.24  Aligned_cols=239  Identities=22%  Similarity=0.279  Sum_probs=203.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999888888887776656788999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||......  ..+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..           
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  151 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLLALQ-----------  151 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccccccC-----------
Confidence            9999999999999865443  25778999999999999999999999999876 568999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----------hHHH-------HHhccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----------SFNE-------RFAGNLR  277 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~-------~~~~~~~  277 (339)
                       +.++...|+++|+|+.+|+++++.|++++||+||+|+||+++|++.....+          ...+       .+.+++.
T Consensus       152 -~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  230 (265)
T PRK07062        152 -PEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLG  230 (265)
T ss_pred             -CCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCC
Confidence             356778999999999999999999999999999999999999997543211          1111       1345788


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||+++.....++..+.+|||.
T Consensus       231 ~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        231 RPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            9999999999999865544444455679873

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=306.55  Aligned_cols=274  Identities=25%  Similarity=0.394  Sum_probs=220.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.      .+.++.+|++|.++++++++++.+.
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999999999888777666553      3678899999999999999999998


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++++|+||||||+.......+.++|+..+++|+.+++.++++++|.|.+. +.++||++||.++.......+......++
T Consensus        97 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  175 (315)
T PRK06196         97 GRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRWDDPHFTRGY  175 (315)
T ss_pred             CCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCccccCccCCC
Confidence            99999999999986544445678899999999999999999999999876 46899999998654332221111112355


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH---------HHHh-ccCCCHHHHHHHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN---------ERFA-GNLRTSEEGADTVL  287 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---------~~~~-~~~~~~~e~A~~v~  287 (339)
                      ++...|+.||++++.+++.++.+++++||+||+|+||+++|++.........         ..+. .++.+|+|+|++++
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  255 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQV  255 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHH
Confidence            6778999999999999999999999999999999999999998654321100         0111 24789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCCCccc------ccccccCCHHHHHHHHHHHHhhhcC
Q 019551          288 WLALQPKEKLVSGSFYFDRAEAPKHL------KFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      ||++.+.....+|.|+.|++......      .......|++..++||+.++++++.
T Consensus       256 ~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~~  312 (315)
T PRK06196        256 WAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTGV  312 (315)
T ss_pred             HHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            99987766667788887876443211      1234567999999999999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-41  Score=303.88  Aligned_cols=234  Identities=16%  Similarity=0.187  Sum_probs=192.1

Q ss_pred             cCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+  ....+.||++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            67999999997  67999999999999999999998863 44445555544433  345789999999999999999999


Q ss_pred             CCCCccEEEEccccccCC-------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          137 KNKPVHVLVNNAGVLENN-------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      .++++|+||||||+....       ...+.++|+.++++|+.++++++++++|+|+++  +++||++||.++.       
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~-------  151 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAV-------  151 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccc-------
Confidence            999999999999987532       124678899999999999999999999999654  4899999998876       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~  282 (339)
                           .+.+++..|++||+|+.+|+++++.|++++||+||+|+||+|+|++.....  ++..+     .+.+++.+|+|+
T Consensus       152 -----~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  226 (261)
T PRK08690        152 -----RAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEV  226 (261)
T ss_pred             -----cCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHH
Confidence                 345778899999999999999999999999999999999999999754321  11111     245678999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+.++||+++.....++..+.+|||..
T Consensus       227 A~~v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        227 GNTAAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             HHHHHHHhCcccCCcceeEEEEcCCcc
Confidence            999999998666655555556799853

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=4.7e-41  Score=300.24  Aligned_cols=239  Identities=27%  Similarity=0.346  Sum_probs=199.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.||+++||||++|||+++|++|++.|++|++++|+++++++..+++..... +.++..+.||+++.+++++++++..+
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999999988888765432 45789999999999999999999998


Q ss_pred             C-CCCccEEEEccccccCC---CCCChhhhhhhhhhhhhH-HHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          137 K-NKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLG-TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       137 ~-~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~-~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      + +|++|+||||||.....   ...+.++|++++++|+.| .+.+.+.+.|+++++ +++.|+++||.++..+       
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~~ss~~~~~~-------  156 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVNISSVAGVGP-------  156 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEEEeccccccC-------
Confidence            8 79999999999998754   347899999999999996 555556666665554 7899999999887743       


Q ss_pred             ccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHH-------HHhccCCC
Q 019551          212 FNSGSFDGM-EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNE-------RFAGNLRT  278 (339)
Q Consensus       212 ~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~-------~~~~~~~~  278 (339)
                           ..+. .+|+++|+|+.+|+|++|.|++++|||||+|+||.+.|++.....     .+..+       .+.+++.+
T Consensus       157 -----~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~  231 (270)
T KOG0725|consen  157 -----GPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGT  231 (270)
T ss_pred             -----CCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccC
Confidence                 2222 799999999999999999999999999999999999999722111     12211       24688999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|+|..+.||+++...++++..+.+|||..
T Consensus       232 ~~eva~~~~fla~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  232 PEEVAEAAAFLASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             HHHHHHhHHhhcCcccccccCCEEEEeCCEE
Confidence            9999999999999877755666777899854

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-41  Score=301.67  Aligned_cols=233  Identities=15%  Similarity=0.189  Sum_probs=189.6

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+..+  .+.++.+|++|.++++++++++.
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELD--APIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHHH
Confidence            4789999999998  5999999999999999999999986432 23334433322  34678899999999999999999


Q ss_pred             cCCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+....      ...+.++|++++++|+.++++++++++|+|++   +++||++||.++.       
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~-------  153 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAE-------  153 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc-------
Confidence            9999999999999986431      23578999999999999999999999999953   5899999998765       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~  282 (339)
                           .+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....  +...+     .+.+++.+|+|+
T Consensus       154 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  228 (258)
T PRK07533        154 -----KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDV  228 (258)
T ss_pred             -----cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHH
Confidence                 245678899999999999999999999999999999999999999864321  11111     134678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||+++.....++..+.+|||.
T Consensus       229 a~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        229 GAVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHHHHHHhChhhccccCcEEeeCCcc
Confidence            99999999865555555555679874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-41  Score=301.60  Aligned_cols=236  Identities=17%  Similarity=0.184  Sum_probs=189.3

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+... ++..+++.+...+.++.++.+|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            34789999999997  899999999999999999999876422 122233333222346888999999999999999999


Q ss_pred             hcCCCCccEEEEccccccC----C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          135 SLKNKPVHVLVNNAGVLEN----N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~----~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      .+.+|++|+||||||+...    .  ...+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+..     
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~-----  153 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGER-----  153 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCcc-----
Confidence            9999999999999998642    1  23577899999999999999999999999953   48999999988762     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHH-----HHhccCCCHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNE-----RFAGNLRTSEE  281 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~-----~~~~~~~~~~e  281 (339)
                             +.+++.+|++||+|+++|+++++.|++++||+||+|+||+++|++....  .++..+     .+.+++.+|+|
T Consensus       154 -------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~  226 (257)
T PRK08594        154 -------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEE  226 (257)
T ss_pred             -------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHH
Confidence                   4567789999999999999999999999999999999999999864321  111111     13467889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+.++||+++.....++..+.+|||.
T Consensus       227 va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        227 VGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             HHHHHHHHcCcccccccceEEEECCch
Confidence            999999999865554444445679873

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=8e-41  Score=301.73  Aligned_cols=237  Identities=30%  Similarity=0.350  Sum_probs=198.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999 7777777777543  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCC-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENN-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+.... .  ..+.+.|++++++|+.+++.++++++|+|+++  +++||++||..+..           
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~-----------  146 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA-----------  146 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC-----------
Confidence            99999999999986432 2  35778999999999999999999999999865  48999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--------HHH-----HHhccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--------FNE-----RFAGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--------~~~-----~~~~~~~~~~e  281 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+.        ...     .+.+++.+|+|
T Consensus       147 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (272)
T PRK08589        147 -ADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEE  225 (272)
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHH
Confidence             3456789999999999999999999999999999999999999986532211        000     13456789999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCCCCc
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      +|+.++||++++....++..+.+|||....
T Consensus       226 va~~~~~l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        226 VAKLVVFLASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             HHHHHHHHcCchhcCcCCCEEEECCCcccC
Confidence            999999999865554444445679986543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.5e-41  Score=301.74  Aligned_cols=234  Identities=16%  Similarity=0.190  Sum_probs=192.1

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..  .++.++.+|++|++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHH
Confidence            3679999999986  89999999999999999999887654  3445555665432  2467889999999999999999


Q ss_pred             HhcCCCCccEEEEccccccC------CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          134 FSLKNKPVHVLVNNAGVLEN------NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      +.+.++++|+||||||+...      ....+.++|++.+++|+.+++.++++++|.|++   +|+||++||..+.     
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~-----  152 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGV-----  152 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccc-----
Confidence            99999999999999998642      223578999999999999999999999999964   4899999998775     


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHH-----HHhccCCCHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNE-----RFAGNLRTSE  280 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~-----~~~~~~~~~~  280 (339)
                             .+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++....  .++..+     .+.+++.+|+
T Consensus       153 -------~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  225 (258)
T PRK07370        153 -------RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQT  225 (258)
T ss_pred             -------cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHH
Confidence                   34577889999999999999999999999999999999999999975321  111111     2346788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+.++||++++....++..+.+|||.
T Consensus       226 dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        226 EVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHHHhChhhccccCcEEEECCcc
Confidence            9999999999866555555556779874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=298.22  Aligned_cols=232  Identities=15%  Similarity=0.210  Sum_probs=189.4

Q ss_pred             cCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....+  .+.++.+|++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHh
Confidence            6799999999986  99999999999999999999998 445555666655433  456788999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC-------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          137 KNKPVHVLVNNAGVLENNR-------LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~-------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      .++++|+||||||+.....       ..+.++|++.+++|+.+++.+++.+.|+|+   ++|+||++||.++.       
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~Iv~iss~~~~-------  150 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALLTLSYLGAE-------  150 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc---CCcEEEEEecCCCC-------
Confidence            9999999999999864321       256789999999999999999999998764   24899999998765       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~-----~~~~~~~~~~~e~  282 (339)
                           .+.+++.+|++||+|+++|+++++.|++++||+||+|+||+++|++....  .....     ..+.+++.+|+|+
T Consensus       151 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  225 (262)
T PRK07984        151 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV  225 (262)
T ss_pred             -----CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHH
Confidence                 34567889999999999999999999999999999999999999864321  11111     1234688999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||+++.....++..+.+|||.
T Consensus       226 a~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        226 GNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHHcCcccccccCcEEEECCCc
Confidence            99999999865554444445668873

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=8.2e-41  Score=303.73  Aligned_cols=235  Identities=13%  Similarity=0.128  Sum_probs=189.2

Q ss_pred             ccCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-------C-C---ccEEEEeccC--C
Q 019551           58 RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-------G-N---ENVHLELCDL--S  122 (339)
Q Consensus        58 ~l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-------~-~---~~~~~~~~Dl--~  122 (339)
                      +++||++|||||  |+|||+++|+.|+++|++|++ +|+.+++++...++.+..       . +   .....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            488999999999  899999999999999999999 888888888877665310       1 1   1145788898  3


Q ss_pred             C------------------HHHHHHHHHHHhcCCCCccEEEEcccccc----CCCCCChhhhhhhhhhhhhHHHHHHHHH
Q 019551          123 S------------------ITEIKSFANRFSLKNKPVHVLVNNAGVLE----NNRLITSEGFELNFAVNVLGTYTITESM  180 (339)
Q Consensus       123 ~------------------~~~v~~~~~~~~~~~~~id~lInnAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~  180 (339)
                      +                  .++++++++++.+.+|++|+||||||+..    +....+.++|++++++|+.+++.++|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            3                  34899999999999999999999998643    2223688999999999999999999999


Q ss_pred             HHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccC
Q 019551          181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM-EQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAET  258 (339)
Q Consensus       181 l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T  258 (339)
                      +|.|++   .|+||++||..+..            +.+++ ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|
T Consensus       165 ~p~m~~---~G~II~isS~a~~~------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T  229 (303)
T PLN02730        165 GPIMNP---GGASISLTYIASER------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGS  229 (303)
T ss_pred             HHHHhc---CCEEEEEechhhcC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccC
Confidence            999964   38999999987763            34444 57999999999999999999986 799999999999999


Q ss_pred             CCccCcc--hhHH----H-HHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          259 PGVAKSM--PSFN----E-RFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       259 ~~~~~~~--~~~~----~-~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....  ++..    . .+.+++.+|+|+|+.++||+++.....++..+.+|||-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        230 RAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             chhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            9875421  1111    1 13467889999999999999866555555556678884

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=299.95  Aligned_cols=232  Identities=14%  Similarity=0.166  Sum_probs=188.2

Q ss_pred             cCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.+..+  ....+.+|++|+++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence            678999999997  8999999999999999999999873 23334444444333  245688999999999999999999


Q ss_pred             CCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          137 KNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      .++++|+||||||+....      ...+.++|++.+++|+.+++.++++++|+|.+   +|+||++||.++.        
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~--------  153 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAE--------  153 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccc--------
Confidence            999999999999986421      23678899999999999999999999999853   4899999997765        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHH-----HHHhccCCCHHHHH
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFN-----ERFAGNLRTSEEGA  283 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~-----~~~~~~~~~~~e~A  283 (339)
                          .+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....  ....     ..+.+++.+|+|+|
T Consensus       154 ----~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA  229 (272)
T PRK08159        154 ----KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVG  229 (272)
T ss_pred             ----cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHH
Confidence                346778899999999999999999999999999999999999998653211  1111     12446788999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||+++.....++..+.+|||.
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        230 DSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHhCccccCccceEEEECCCc
Confidence            9999999865544444445669984

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-40  Score=296.24  Aligned_cols=232  Identities=17%  Similarity=0.179  Sum_probs=186.3

Q ss_pred             cCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++.+..+  ....+.+|++|+++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            67999999996  689999999999999999999876522 2223334433333  234688999999999999999999


Q ss_pred             CCCCccEEEEccccccCC-------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          137 KNKPVHVLVNNAGVLENN-------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      .++++|+||||||+....       ...+.++|++.+++|+.+++.++++++|+|.   +.|+||++||.++.       
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii~iss~~~~-------  150 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLLTLSYLGAE-------  150 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEEEEeccccc-------
Confidence            999999999999986432       1257789999999999999999999999994   34899999998775       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~-----~~~~~~~~~~~e~  282 (339)
                           .+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.....  ++..     ..+.+++.+|+|+
T Consensus       151 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  225 (260)
T PRK06997        151 -----RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEV  225 (260)
T ss_pred             -----cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHH
Confidence                 345677899999999999999999999999999999999999998754221  1111     1135678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||++++....++..+.+|||.
T Consensus       226 a~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        226 GNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHHhCccccCcceeEEEEcCCh
Confidence            99999999866555555555679884

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-40  Score=294.56  Aligned_cols=237  Identities=24%  Similarity=0.292  Sum_probs=199.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999999888888777654  246888999999999999999999999


Q ss_pred             CCCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+... .  ...+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..           
T Consensus        81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~-----------  148 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHT-----------  148 (254)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhc-----------
Confidence            9999999999998643 2  236788999999999999999999999999876 578999999987652           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~  287 (339)
                      .+.++...|++||+|+++++++++.|++++||+||+|+||+++|++.....  +.....     +.+++.+|+|+|+.++
T Consensus       149 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  228 (254)
T PRK07478        149 AGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAAL  228 (254)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            135677899999999999999999999999999999999999999765431  111111     2356789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||++++....++..+.+|||.
T Consensus       229 ~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        229 FLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHcCchhcCCCCCeEEeCCch
Confidence            999866554455555679874

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-40  Score=300.07  Aligned_cols=237  Identities=22%  Similarity=0.287  Sum_probs=195.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK---------EKGETALSAIRSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      ++||++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...  +.++.++.+|++|++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            6799999999999999999999999999999999876         6677777777644  3467889999999999999


Q ss_pred             HHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-----CCEEEEEcCcccc
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-----DARVITVSSGGMY  202 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-----~~~Iv~vsS~~~~  202 (339)
                      +++++.+.++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|+|+++..     .|+||++||.++.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            99999999999999999999876443  3678999999999999999999999999975421     3799999998876


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-Hhc--cCCCH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-FAG--NLRTS  279 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~--~~~~~  279 (339)
                      .            +.++...|++||+|+++|+++++.|++++||+||+|+|| ++|++.....+..... ..+  +..+|
T Consensus       162 ~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~p  228 (286)
T PRK07791        162 Q------------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAP  228 (286)
T ss_pred             c------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCH
Confidence            3            457788999999999999999999999999999999999 8998764332221111 112  35789


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      +|+|++++||+++.....++..+.+|||...
T Consensus       229 edva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        229 ENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            9999999999986544444444566988543

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-40  Score=292.82  Aligned_cols=238  Identities=18%  Similarity=0.234  Sum_probs=197.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999864 456666666543  34678899999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|.++ +.++||++||.++..+.         
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~---------  152 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMSGIIVN---------  152 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchhhcCCC---------
Confidence            9999999999999875433  36789999999999999999999999999876 56899999998876321         


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHH-----HHHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                       +.+....|+++|+|+++++++++.|++++||+||+|+||+++|++.... ..+..     ..+.+++.+|+|+|++++|
T Consensus       153 -~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~  231 (254)
T PRK06114        153 -RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVF  231 (254)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             1123578999999999999999999999999999999999999986432 11111     1235788999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       232 l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        232 LLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HcCccccCcCCceEEECcCE
Confidence            99866555555566779884

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-40  Score=295.20  Aligned_cols=231  Identities=15%  Similarity=0.161  Sum_probs=185.5

Q ss_pred             cccCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        57 ~~l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      .++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.+++..+++    + .++.++.+|++|+++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----P-EPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----C-CCCcEEeCCCCCHHHHHHHHH
Confidence            4578999999999  89999999999999999999999864  2233333332    2 256789999999999999999


Q ss_pred             HHhcCCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          133 RFSLKNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++.+.++++|+||||||+....      ...+.++|++.+++|+.+++.+++.++|+|++   +|+||+++|.+..    
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~~~----  150 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDATV----  150 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecccc----
Confidence            9999999999999999986431      22567899999999999999999999999963   4799999875422    


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhc-cCCC
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAG-NLRT  278 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~-~~~~  278 (339)
                               +.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....  ++..+     .+.+ ++.+
T Consensus       151 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (256)
T PRK07889        151 ---------AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKD  221 (256)
T ss_pred             ---------cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCC
Confidence                     34667889999999999999999999999999999999999999764321  11111     1233 5789


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|+.++||+++.....++..+.+|||.
T Consensus       222 p~evA~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        222 PTPVARAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHHHHHHHHHHhCcccccccceEEEEcCce
Confidence            999999999999865554444445568874

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-39  Score=295.43  Aligned_cols=278  Identities=28%  Similarity=0.396  Sum_probs=218.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++.++.++.+|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999999988888777777655556788999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc-cccCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT-AHLTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~-~~~~~~~~~~~~  215 (339)
                      .++++|+||||||+.......+.++++..+++|+.|++.+++.++|.|++. +.++||++||.++.. .....++.....
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~~  170 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDDLQWER  170 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCCccccCccc
Confidence            999999999999987655556778899999999999999999999999876 568999999987553 211111111123


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEe--eCCcccCCCccCcchhHHH---HHhc-cCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSM--HPGWAETPGVAKSMPSFNE---RFAG-NLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v--~PG~v~T~~~~~~~~~~~~---~~~~-~~~~~~e~A~~v~~l  289 (339)
                      ++++...|++||+|+++|+++++.++++.||+|+++  +||+|+|++..........   .... ...++++.+..++++
T Consensus       171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  250 (306)
T PRK06197        171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRA  250 (306)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Confidence            456778999999999999999999999888777655  7999999987644221111   1111 246789999999998


Q ss_pred             hccCCCCCCCcceeeCCCCCC-----cccccccccCCHHHHHHHHHHHHhhhc
Q 019551          290 ALQPKEKLVSGSFYFDRAEAP-----KHLKFAATAASHARIDPIVDVLRSMAN  337 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~  337 (339)
                      +.++  ...+|.|+.+++...     .....+....+++..++||+.++++++
T Consensus       251 ~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  301 (306)
T PRK06197        251 ATDP--AVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTG  301 (306)
T ss_pred             hcCC--CcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHC
Confidence            8643  345788887554221     111223456789999999999999986

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=5e-40  Score=294.60  Aligned_cols=238  Identities=15%  Similarity=0.191  Sum_probs=195.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|+++||||++|||+++|++|+++|++|++++| +++++++..+++.... +.++.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999875 5566666666665433 3478899999999999999999999


Q ss_pred             cCCCCccEEEEccccccC------CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          136 LKNKPVHVLVNNAGVLEN------NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~------~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      +.++++|+||||||+...      ..  ..+.+++++.+++|+.+++.+++.++|.|.+. +.++||++||..+..    
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~----  157 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV----  157 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc----
Confidence            999999999999997532      11  25678999999999999999999999999876 568999999987652    


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSE  280 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~  280 (339)
                              +.+++..|++||+|+++|+++|+.|++++||+||+|+||+++|++.....  ++..+.     +.+++.+|+
T Consensus       158 --------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~  229 (260)
T PRK08416        158 --------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPE  229 (260)
T ss_pred             --------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHH
Confidence                    35677899999999999999999999999999999999999999854321  111111     245788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||+++.....++..+.+|||.
T Consensus       230 ~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        230 DLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            9999999999865544444445668873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-39  Score=284.79  Aligned_cols=219  Identities=24%  Similarity=0.343  Sum_probs=195.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+.+|++||||||++|||+++|.+|+++|+++++.|.|.+..++..+++++. +  +++.+.||+++.+++.+..+++++
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g--~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G--EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C--ceeEEEecCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999999999998876 2  799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ..|.+|+||||||+......  .+.+++++++++|+.|+|+.+|+++|.|.+. ..|+||.++|.+|..           
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~~-----------  178 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGLF-----------  178 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhccc-----------
Confidence            99999999999999986654  6889999999999999999999999999987 679999999999984           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcC---CCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKE---KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~---~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                       +.++...|++||+|+.+|.++|..|+..   +||+...|+|++++|+|.....+   ....-++.+|+++|+.++..+.
T Consensus       179 -g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~---~~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  179 -GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATP---FPTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             -CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCC---CccccCCCCHHHHHHHHHHHHH
Confidence             5788999999999999999999999873   57999999999999999875211   1123456899999999998876


Q ss_pred             cCC
Q 019551          292 QPK  294 (339)
Q Consensus       292 ~~~  294 (339)
                      ...
T Consensus       255 ~n~  257 (300)
T KOG1201|consen  255 TNQ  257 (300)
T ss_pred             cCC
Confidence            443

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=291.71  Aligned_cols=232  Identities=20%  Similarity=0.256  Sum_probs=196.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999988777665554     246888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          138 NKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      ++++|+||||||...... ..+.++|++.+++|+.+++.++++++|.|+ + +.++||++||.++..            +
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~~~~~------------~  143 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSISAKF------------A  143 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECchhhcc------------C
Confidence            999999999999865332 357789999999999999999999999997 3 568999999988763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHH------HHhccCCCHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNE------RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~------~~~~~~~~~~e~A~~v~  287 (339)
                      .++...|+++|+++++++++++.|++++||+||+|+||+++|++......   ...+      .+.+++.+|+|+|++++
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~  223 (261)
T PRK08265        144 QTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVA  223 (261)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHH
Confidence            56678999999999999999999999999999999999999997643211   1111      13467889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||++++....++..+.+|||.
T Consensus       224 ~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        224 FLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHcCccccCccCcEEEECCCe
Confidence            999866555555567789984

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.1e-39  Score=295.58  Aligned_cols=270  Identities=26%  Similarity=0.409  Sum_probs=212.3

Q ss_pred             EEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           65 VVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        65 lITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      |||||++|||+++|++|+++| ++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999988887777766432  346888999999999999999999988899999


Q ss_pred             EEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCcccccccc----C----ccc-
Q 019551          144 LVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGMYTAHL----T----DDL-  210 (339)
Q Consensus       144 lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~~~~~~----~----~~~-  210 (339)
                      ||||||+....   ...+.++|++++++|+.|++.+++.++|.|++++. +++||++||..+..+..    .    .+. 
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            99999986432   23678999999999999999999999999987622 58999999987653210    0    000 


Q ss_pred             --------------cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcc-cCCCccCcchhH------
Q 019551          211 --------------EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWA-ETPGVAKSMPSF------  268 (339)
Q Consensus       211 --------------~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v-~T~~~~~~~~~~------  268 (339)
                                    ......+.+..+|++||+|+..+++.++.++.+ +||+||+|+||+| .|++.....+..      
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~  238 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP  238 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence                          000123456789999999999999999999975 6999999999999 788865432211      


Q ss_pred             -HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceee-CCCCCCcccccccccCCHHHHHHHHHHHHhhhc
Q 019551          269 -NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYF-DRAEAPKHLKFAATAASHARIDPIVDVLRSMAN  337 (339)
Q Consensus       269 -~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~-d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  337 (339)
                       ...+.+++.+|+++|+.++++++++.. ..+|.|+. ||+........+..+.|++..++||+.++++++
T Consensus       239 ~~~~~~~~~~~pe~~a~~~~~l~~~~~~-~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        239 FQKYITKGYVSEEEAGKRLAQVVSDPSL-TKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHhcccccHHHhhhhhhhhcccccc-CCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence             122334578999999999999986554 46888876 555333323355567899999999999999874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-39  Score=289.15  Aligned_cols=232  Identities=21%  Similarity=0.223  Sum_probs=193.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||++|||+++|++|+++|++|++++|+++++++..+++.+.   .++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999998888888877543   2578899999999999999999999999999


Q ss_pred             EEEEccccccC----CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          143 VLVNNAGVLEN----NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       143 ~lInnAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +||||||....    ....+.++|.+.+++|+.+++.+++.++|.|.+..++|+||++||.++.            .+.+
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~------------~~~~  146 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK------------EPMP  146 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC------------CCCC
Confidence            99999997542    1235678899999999999999999999998754467899999998876            3456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhH-H-----HHHhccCCCHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSF-N-----ERFAGNLRTSEE  281 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~-~-----~~~~~~~~~~~e  281 (339)
                      +...|++||+|+.+|+++++.|++++||+||+|+||+++|++.....           ++. .     ..+.+++.+|+|
T Consensus       147 ~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  226 (259)
T PRK08340        147 PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEE  226 (259)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHH
Confidence            77899999999999999999999999999999999999999864211           110 0     113467889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +|++++||++++....++..+.+|||..
T Consensus       227 va~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        227 LGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             HHHHHHHHcCcccccccCceEeecCCcC
Confidence            9999999998655444444456799854

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=5.1e-39  Score=286.92  Aligned_cols=235  Identities=17%  Similarity=0.258  Sum_probs=193.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||+++||||++|||+++|++|+++|++|++++++..  ++..+++...  +.++..+.+|++|.++++++++++.+.
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999887643  3444555433  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.++|++.+++|+.+++.++++++|.|.+++.+|+||++||..+..            
T Consensus        83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------  150 (253)
T PRK08993         83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ------------  150 (253)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc------------
Confidence            999999999999865443  357789999999999999999999999998764568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|++||+|+++++++++.|+.++||+||+|+||+++|++.....+.  ..+     .+.+++.+|+|+|+.++|
T Consensus       151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~  230 (253)
T PRK08993        151 GGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVF  230 (253)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            3456679999999999999999999999999999999999999986532211  111     134678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       231 l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        231 LASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             HhCccccCccCcEEEECCCE
Confidence            99866554454455668873

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3.7e-38  Score=289.88  Aligned_cols=276  Identities=24%  Similarity=0.378  Sum_probs=214.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.+++++..+++..  .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999 9999999999888877776642  23467889999999999999999998888


Q ss_pred             CCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccC----c--
Q 019551          139 KPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLT----D--  208 (339)
Q Consensus       139 ~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~----~--  208 (339)
                      +++|+||||||+..+.   ...+.++|++++++|+.+++.+++.++|+|++.+ +.++||++||..+......    .  
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            9999999999986432   2357889999999999999999999999998763 2589999999877532110    0  


Q ss_pred             --ccc-------------ccCCCCcchHHHHHhHHHHHHHHHHHHHHHc-CCCeEEEEeeCCcc-cCCCccCcchhH---
Q 019551          209 --DLE-------------FNSGSFDGMEQYARNKRVQVALTEKWSEMYK-EKGIGFYSMHPGWA-ETPGVAKSMPSF---  268 (339)
Q Consensus       209 --~~~-------------~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~v~~v~PG~v-~T~~~~~~~~~~---  268 (339)
                        .+.             ....++.+..+|++||+|+..+++.+++++. ++||+|++|+||+| +|++.....+..   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~  239 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL  239 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence              000             0113345678999999999999999999985 46999999999999 699875432211   


Q ss_pred             ----HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC-CcccccccccCCHHHHHHHHHHHHhhhcC
Q 019551          269 ----NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA-PKHLKFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       269 ----~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                          .......+.+|++.|+.+++++.++... .+|.|+..++.. +.....+....|+...++||+.++++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  313 (314)
T TIGR01289       240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKLK-KSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVGL  313 (314)
T ss_pred             HHHHHHHHhccccchhhhhhhhHHhhcCcccC-CCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhcc
Confidence                1111234679999999999998765443 578888754431 11112344567999999999999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=284.57  Aligned_cols=235  Identities=20%  Similarity=0.317  Sum_probs=199.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++..+.+|++|+++++++++++.+.+
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999998888887777654  2467888999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||......  ..+.++|++.+++|+.+++.+++++++.|.++ +.++||++||..+..            +
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------~  151 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINICSMQSEL------------G  151 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccchhcc------------C
Confidence            99999999999865433  36789999999999999999999999999766 568999999987652            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~~l  289 (339)
                      .++...|+++|+|+++++++++.|++++||+||+|+||+++|++.....  +...+     .+.+++.+|+|+|++++||
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l  231 (254)
T PRK08085        152 RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFL  231 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            4567799999999999999999999999999999999999999765321  11111     1346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....++..+.+|||.
T Consensus       232 ~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        232 SSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             hCccccCCcCCEEEECCCe
Confidence            9865555555556679884

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=283.65  Aligned_cols=232  Identities=25%  Similarity=0.333  Sum_probs=188.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc-
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL-  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-  136 (339)
                      +++|+++||||++|||+++|++|++.|++|++++ |+.+++++...++...  +..+..+.+|+++.+++..+++++.+ 
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 5667777666666543  23577889999999999999888764 


Q ss_pred             ---CCC--CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          137 ---KNK--PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       137 ---~~~--~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                         .++  ++|+||||||+.....  ..+.++|++++++|+.+++.++++++|.|++   .++||++||..+..      
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~------  150 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRI------  150 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCccccc------
Confidence               333  8999999999764332  3577889999999999999999999999964   48999999998763      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----HHHH--HhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----FNER--FAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~--~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++++++++.|++++||+||+|+||+|+|++.....+.     ....  +.+++.+|+|+
T Consensus       151 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  224 (252)
T PRK12747        151 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDI  224 (252)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHH
Confidence                  4567789999999999999999999999999999999999999986532211     1111  24678899999


Q ss_pred             HHHHHHHhccCCCCCCCcc-eeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~-~~~d~~~  308 (339)
                      |+.++||+++... +++|. +.+|||.
T Consensus       225 a~~~~~l~s~~~~-~~~G~~i~vdgg~  250 (252)
T PRK12747        225 ADTAAFLASPDSR-WVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHHHcCcccc-CcCCcEEEecCCc
Confidence            9999999985444 55555 5568874

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.1e-38  Score=285.49  Aligned_cols=224  Identities=21%  Similarity=0.263  Sum_probs=188.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+..             .++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999986431             25788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.+++.++++++|+|.++ +.++||++||..+..            
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  136 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSFA------------  136 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhcc------------
Confidence            999999999999865433  36789999999999999999999999999876 568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------hhH-H--------HHHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------PSF-N--------ERFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------~~~-~--------~~~~~~~~~~  279 (339)
                      +.++...|++||+|+++|+++++.|+++. |+||+|+||+++|++.....       +.. .        ..+.+++.+|
T Consensus       137 ~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  215 (258)
T PRK06398        137 VTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKP  215 (258)
T ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCH
Confidence            45678899999999999999999999875 99999999999999764321       111 0        0134677899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+.++||+++.....++..+++|||.
T Consensus       216 ~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        216 EEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            99999999999865555555555679985

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-38  Score=287.76  Aligned_cols=236  Identities=23%  Similarity=0.310  Sum_probs=197.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++..+++++.+.
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988888777777543  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCC-----------------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          138 NKPVHVLVNNAGVLENN-----------------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-----------------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      ++++|+||||||...+.                 ...+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~  163 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINISSMN  163 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccch
Confidence            99999999999975432                 124678899999999999999999999999876 568999999998


Q ss_pred             ccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------hhHHH---
Q 019551          201 MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------PSFNE---  270 (339)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------~~~~~---  270 (339)
                      ++.            +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....       .+..+   
T Consensus       164 ~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  231 (278)
T PRK08277        164 AFT------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKIL  231 (278)
T ss_pred             hcC------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHh
Confidence            873            45677899999999999999999999999999999999999999754321       11111   


Q ss_pred             --HHhccCCCHHHHHHHHHHHhcc-CCCCCCCcceeeCCCC
Q 019551          271 --RFAGNLRTSEEGADTVLWLALQ-PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       271 --~~~~~~~~~~e~A~~v~~l~s~-~~~~~~~G~~~~d~~~  308 (339)
                        .+.+++.+|+|+|++++||+++ .....++..+.+|||.
T Consensus       232 ~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        232 AHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             ccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence              1346788999999999999986 4444444455679984

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-38  Score=281.98  Aligned_cols=235  Identities=26%  Similarity=0.340  Sum_probs=199.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||.++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.+++.++++++.+.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888777777554  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|++|||||......   ..+.+++++.+++|+.+++.++++++|.|.++ +.++||++||..+..           
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~-----------  149 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLG-----------  149 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcc-----------
Confidence            999999999999865432   35788999999999999999999999999766 568999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHHH-----HhccCCCHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                       +.++...|+++|+|+++|+++++.|+.++||+||+|+||+++|++.....   +...+.     +.+++.+|+|+|+.+
T Consensus       150 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~  228 (253)
T PRK06172        150 -AAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAV  228 (253)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHH
Confidence             45678899999999999999999999999999999999999999876532   222111     235678999999999


Q ss_pred             HHHhccCCCCCCCcce-eeCCCC
Q 019551          287 LWLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      +||+++... +.+|.+ .+|||.
T Consensus       229 ~~l~~~~~~-~~~G~~i~~dgg~  250 (253)
T PRK06172        229 LYLCSDGAS-FTTGHALMVDGGA  250 (253)
T ss_pred             HHHhCcccc-CcCCcEEEECCCc
Confidence            999986655 455554 668874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=283.38  Aligned_cols=235  Identities=19%  Similarity=0.290  Sum_probs=195.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ ++.++..+.+.+.  +.++.++.+|+++.++++++++++.+.
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998 5555555555433  246889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||.......  .+.++|++.+++|+.+++.++++++|+|.++ +.++||++||..+..            
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------  155 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQ------------  155 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhcc------------
Confidence            9999999999998654433  5678999999999999999999999999876 568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|+|+++++++++.|++++||+||+|+||+++|++......  ...     ..+.+++.+|+|+|++++|
T Consensus       156 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (258)
T PRK06935        156 GGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVF  235 (258)
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            346678999999999999999999999999999999999999997543211  111     1134678999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        236 LASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HcChhhcCCCCCEEEECCCe
Confidence            99865554455555679873

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-38  Score=282.72  Aligned_cols=237  Identities=22%  Similarity=0.252  Sum_probs=198.6

Q ss_pred             cCCCEEEEEcCCC-chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANA-GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~-gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|+++||||+| |||+++++.|+++|++|++++|+.+++++..+++.+..+..++.++.+|++++++++++++++.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6789999999985 999999999999999999999999888888887776555457888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.++|++.+++|+.+++.++++++|.|.+....++||+++|..+..            
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------  162 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------  162 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence            899999999999765433  257789999999999999999999999998764378999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHH-----HHhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNE-----RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~-----~~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|+++|+|+++++++++.|++++||+||+|+||+++|++..... ++..+     .+.+++.+|+|+|+.++||
T Consensus       163 ~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l  242 (262)
T PRK07831        163 AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFL  242 (262)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            34567789999999999999999999999999999999999999865432 11111     1246788999999999999


Q ss_pred             hccCCCCCCCcceeeCCC
Q 019551          290 ALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~  307 (339)
                      +++.....++..+.+|++
T Consensus       243 ~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        243 ASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             cCchhcCcCCceEEeCCC
Confidence            986554444444456874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-38  Score=284.74  Aligned_cols=235  Identities=25%  Similarity=0.347  Sum_probs=190.5

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++.+|+++||||++|||+++|++|+++|++|++++|+.++..   +++...    ++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999877654322   223221    467889999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++++++|+.+++.+++.++|.|+++ +.++||++||..+...          
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~----------  144 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGT----------  144 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCCC----------
Confidence            9999999999999865433  25788999999999999999999999999866 5789999999877631          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-h----hHHH-----HHhccCCCHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-P----SFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~----~~~~-----~~~~~~~~~~e~A~  284 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..... +    ...+     .+.+++.+|+|+|+
T Consensus       145 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  223 (255)
T PRK06463        145 -AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIAN  223 (255)
T ss_pred             -CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHH
Confidence             23566789999999999999999999999999999999999999864321 1    1111     12356789999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      .++||+++.....++..+.+|||...
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGRID  249 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCeee
Confidence            99999986555444445567988643

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-38  Score=280.34  Aligned_cols=236  Identities=21%  Similarity=0.255  Sum_probs=197.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|+++.++++++++++.+.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988888887777654  236778999999999999999999999


Q ss_pred             CCCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||....   ....+.+++++.+++|+.+++.++++++|+|+++ +.++|+++||..+..           
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~-----------  150 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVASVNGVS-----------  150 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECchhhcC-----------
Confidence            9999999999997532   2235778899999999999999999999999776 568999999987763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHHH-----HhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~-----~~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||+++++|+++++.|+.++||+||+|+||+++|++.......  ..+.     +..++.+|+|+|+.++
T Consensus       151 -~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  229 (252)
T PRK07035        151 -PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVL  229 (252)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHH
Confidence             3567789999999999999999999999999999999999999986543221  1111     2356789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+++......+..+.+|||.
T Consensus       230 ~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        230 YLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             HHhCccccCccCCEEEeCCCc
Confidence            999876554444455668874

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.3e-39  Score=287.06  Aligned_cols=223  Identities=29%  Similarity=0.415  Sum_probs=191.3

Q ss_pred             cCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC-CCccEE
Q 019551           68 GAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN-KPVHVL  144 (339)
Q Consensus        68 Gas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~l  144 (339)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+. +  ++.+|++++++++++++++.+.+ |++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-E--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-E--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-c--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  99999999999999999999999999988888888877653 3  59999999999999999999998 999999


Q ss_pred             EEccccccC----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          145 VNNAGVLEN----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       145 InnAG~~~~----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      |||+|....    .+  ..+.++|++.+++|+.+++.++|+++|+|++.   ++||++||..+.            .+.+
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~------------~~~~  142 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQ------------RPMP  142 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGT------------SBST
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhc------------ccCc
Confidence            999998765    22  25678999999999999999999999988754   899999998776            3467


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHHHHh
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      ++..|+++|+|+++|+|++|.|+++ +|||||+|+||+++|++.....  ++..+     .+.+++.+|+|+|++++||+
T Consensus       143 ~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~  222 (241)
T PF13561_consen  143 GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLA  222 (241)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHh
Confidence            7889999999999999999999999 9999999999999999754332  22222     24577789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++....+++..+.+|||-
T Consensus       223 s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  223 SDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SGGGTTGTSEEEEESTTG
T ss_pred             CccccCccCCeEEECCCc
Confidence            976666666666789983

...

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=4.5e-38  Score=286.79  Aligned_cols=234  Identities=24%  Similarity=0.237  Sum_probs=191.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.  +..++..+.+.+.  +.++.++.+|++|.+++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999988754  3444444444332  3467889999999999999999999


Q ss_pred             cCCCCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|++|||||....   ....+.++|++++++|+.+++.++++++|+|++   +++||++||..++.         
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~---------  191 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQ---------  191 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhcc---------
Confidence            999999999999997532   223678999999999999999999999999963   48999999988763         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHH-----HHhccCCCHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNE-----RFAGNLRTSEEGADT  285 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~-----~~~~~~~~~~e~A~~  285 (339)
                         +.++..+|++||+|+++++++++.|++++||+||+|+||+|+|++....  .++..+     .+.+++.+|+|+|++
T Consensus       192 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~  268 (294)
T PRK07985        192 ---PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPV  268 (294)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHH
Confidence               4567789999999999999999999999999999999999999975321  111111     134578899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||+++.....++..+.+|||.
T Consensus       269 ~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        269 YVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHhhhChhcCCccccEEeeCCCe
Confidence            99999865555555555679884

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=6.4e-38  Score=280.33  Aligned_cols=238  Identities=21%  Similarity=0.314  Sum_probs=201.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.||+++||||++|||+++++.|+++|++|++++|+.+++++..+++....++.++.++.+|++++++++++++++.+.
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            37799999999999999999999999999999999999988888888876655668899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.+++++.+++|+.+++.++++++|+|+++ +.++||++||..+..            
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~------------  152 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLT------------  152 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCC------------
Confidence            999999999999864333  36789999999999999999999999999876 568999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHHH-----HhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|++++.++++++.|+.++||+||+|+||+++|++.....+  +..+.     +.+++.+|+|++.+++|
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  232 (257)
T PRK09242        153 HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAF  232 (257)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            456677899999999999999999999999999999999999998754322  11111     23567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++......+..+.+||+.
T Consensus       233 l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        233 LCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HhCcccccccCCEEEECCCe
Confidence            99855444444444568874

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.4e-38  Score=281.13  Aligned_cols=234  Identities=23%  Similarity=0.271  Sum_probs=196.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999998888877777543  246888999999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||||......  ..+.+++++++++|+.+++.+++.+++.|++.+.+++||++||..+..            +.+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~  147 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV------------GNP  147 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc------------CCC
Confidence            999999999865433  357789999999999999999999999998764568999999987763            346


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---------h-H-H-----HHHhccCCCHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---------S-F-N-----ERFAGNLRTSEEG  282 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---------~-~-~-----~~~~~~~~~~~e~  282 (339)
                      +...|+++|++++.+++.++.|++++||+||+|+||+++|++......         . . .     ..+.+++.+|+|+
T Consensus       148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  227 (256)
T PRK08643        148 ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDV  227 (256)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHH
Confidence            677899999999999999999999999999999999999998643210         0 0 0     1124567899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||+++.....++..+.+|||.
T Consensus       228 a~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        228 ANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHHhCccccCccCcEEEeCCCe
Confidence            99999999865555555555679873

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.2e-38  Score=279.30  Aligned_cols=234  Identities=24%  Similarity=0.312  Sum_probs=190.9

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecC-----------chhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRS-----------KEKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+           .++.++..+++.+.  +.++.++.+|++|.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            4789999999999  499999999999999999998643           22233344444433  34788999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      ++++++++++.+.++++|++|||||......  ..+.++|++.+++|+.+++.++++++|.|+++ ..|+||++||..+.
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~  159 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcccccC
Confidence            9999999999999999999999999865443  36788999999999999999999999999766 56899999998876


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH--HHHhccCCCHH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN--ERFAGNLRTSE  280 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~  280 (339)
                                  .+.+++..|++||+++.+|+++++.|++++||+||+|+||+++|++......+..  ..+.+++.+|+
T Consensus       160 ------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (256)
T PRK12859        160 ------------GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPK  227 (256)
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHH
Confidence                        3467789999999999999999999999999999999999999986543221111  11235678999


Q ss_pred             HHHHHHHHHhccCCCCCCCcce-eeCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~-~~d~~  307 (339)
                      |+|+.++||+++... +.+|.+ .+|||
T Consensus       228 d~a~~~~~l~s~~~~-~~~G~~i~~dgg  254 (256)
T PRK12859        228 DAARLIKFLASEEAE-WITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHhCcccc-CccCcEEEeCCC
Confidence            999999999986544 555554 56887

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=279.51  Aligned_cols=237  Identities=22%  Similarity=0.296  Sum_probs=197.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+. +..+...+++...  +.++.++.+|++|.++++++++.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998854 4455566666543  3468889999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|++|||||......  ..+.++|++.+++|+.+++.+++.++|.|.+.+..++||++||..+.           
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------  149 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------  149 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------
Confidence            99999999999999866543  25778999999999999999999999999877556899999998765           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                       .+.++..+|+++|+|+.+++++++.|+.++||+||+|+||+++|++.....  ++....     +.+++.+|+|+|+.+
T Consensus       150 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  228 (261)
T PRK08936        150 -IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVA  228 (261)
T ss_pred             -CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             345677899999999999999999999999999999999999999865332  221111     246788999999999


Q ss_pred             HHHhccCCCCCCCcc-eeeCCCC
Q 019551          287 LWLALQPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~-~~~d~~~  308 (339)
                      +||++++.. +++|. +++|+|.
T Consensus       229 ~~l~s~~~~-~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEAS-YVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccC-CccCcEEEECCCc
Confidence            999986554 45555 6679884

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.4e-38  Score=278.73  Aligned_cols=233  Identities=24%  Similarity=0.323  Sum_probs=191.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||+++||||++|||+++|++|+++|++|++++|+..  ++..+.+.+.  +.++.++.+|+++.+++.++++++.+.+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999752  3344444333  2468899999999999999999998888


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||.......  .+.++|++++++|+.+++.++++++|.|.+++..++||++||..++.            +
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  146 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ------------G  146 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc------------C
Confidence            999999999998765432  57789999999999999999999999998764368999999987763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH-----HHHhccCCCHHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN-----ERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~-----~~~~~~~~~~~e~A~~v~~l  289 (339)
                      .+....|++||+|+++++++++.|++++||+||+|+||+++|++.....+  ...     ..+.+++.+|+|+|++++||
T Consensus       147 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (248)
T TIGR01832       147 GIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFL  226 (248)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999997653221  111     11246788999999999999


Q ss_pred             hccCCCCCCCcce-eeCCCC
Q 019551          290 ALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~-~~d~~~  308 (339)
                      +++... +.+|.+ .+|||.
T Consensus       227 ~s~~~~-~~~G~~i~~dgg~  245 (248)
T TIGR01832       227 ASSASD-YVNGYTLAVDGGW  245 (248)
T ss_pred             cCcccc-CcCCcEEEeCCCE
Confidence            986554 444555 568874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=288.74  Aligned_cols=243  Identities=12%  Similarity=0.114  Sum_probs=178.8

Q ss_pred             ccccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh--------hcCCc-----cEEEEecc
Q 019551           56 QARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS--------KTGNE-----NVHLELCD  120 (339)
Q Consensus        56 ~~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~--------~~~~~-----~~~~~~~D  120 (339)
                      ..+++||+++||||+  +|||+++|+.|+++|++|++.+|.+ ++....+....        ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            456889999999995  9999999999999999999987652 11111111000        00000     01112233


Q ss_pred             CCCH------------------HHHHHHHHHHhcCCCCccEEEEcccccc----CCCCCChhhhhhhhhhhhhHHHHHHH
Q 019551          121 LSSI------------------TEIKSFANRFSLKNKPVHVLVNNAGVLE----NNRLITSEGFELNFAVNVLGTYTITE  178 (339)
Q Consensus       121 l~~~------------------~~v~~~~~~~~~~~~~id~lInnAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~  178 (339)
                      +++.                  ++++++++++.+.+|++|+||||||...    +....+.++|++++++|+.|++++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3333                  4689999999999999999999998753    22236889999999999999999999


Q ss_pred             HHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcc
Q 019551          179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM-EQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWA  256 (339)
Q Consensus       179 ~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v  256 (339)
                      +++|+|++   .|+||+++|..+..            +.+++ ..|++||+|+++|+++|+.|+++ +|||||+|+||++
T Consensus       162 a~~p~m~~---~G~ii~iss~~~~~------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v  226 (299)
T PRK06300        162 HFGPIMNP---GGSTISLTYLASMR------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL  226 (299)
T ss_pred             HHHHHhhc---CCeEEEEeehhhcC------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc
Confidence            99999964   47899999987753            34554 37999999999999999999987 5999999999999


Q ss_pred             cCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCCcccc
Q 019551          257 ETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLK  314 (339)
Q Consensus       257 ~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~~~~  314 (339)
                      +|++.....  +...+     .+.+++.+|+|+|+.++||+++.....++..+.+|||....-++
T Consensus       227 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        227 ASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             cChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCC
Confidence            999864321  11111     13467789999999999999865554455555679886544443

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=279.18  Aligned_cols=234  Identities=22%  Similarity=0.224  Sum_probs=189.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ ..++..+++...  +.++.++.+|+++.+++.++++++.+.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            47799999999999999999999999999999999985 344555555433  346788999999999999999999999


Q ss_pred             CCCccEEEEcccccc---CCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLE---NNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||...   +....+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..           
T Consensus        82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~-----------  149 (260)
T PRK12823         82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRG-----------  149 (260)
T ss_pred             cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccccC-----------
Confidence            999999999999643   22236788999999999999999999999999876 568999999987642           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------------chhHH-----HHHhccC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------------MPSFN-----ERFAGNL  276 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------------~~~~~-----~~~~~~~  276 (339)
                         ++..+|++||+|+++|+++++.|++++||+||+|+||+|+||+....             .+...     ..+.+++
T Consensus       150 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T PRK12823        150 ---INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRY  226 (260)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccC
Confidence               22457999999999999999999999999999999999999853110             01111     1134567


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      .+|+|+|++++||+++.....++..+.+|+|+.
T Consensus       227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        227 GTIDEQVAAILFLASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEeecCCCC
Confidence            899999999999998654444455667798864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=282.10  Aligned_cols=230  Identities=22%  Similarity=0.245  Sum_probs=189.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999988776655543     2357889999999999999999999999


Q ss_pred             CCccEEEEccccccCC-C--CCChhh----hhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          139 KPVHVLVNNAGVLENN-R--LITSEG----FELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       139 ~~id~lInnAG~~~~~-~--~~~~~~----~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +++|+||||||+.... .  ..+.++    |++++++|+.+++.++++++|.|+++  +++||+++|..+..        
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~--------  148 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFY--------  148 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcC--------
Confidence            9999999999986422 1  234443    88999999999999999999998764  58999999988763        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----------chhHHH-----HHhcc
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----------MPSFNE-----RFAGN  275 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----------~~~~~~-----~~~~~  275 (339)
                          +.++...|++||+|+++|+++++.|+++ +|+||+|+||+++|++....           .++..+     .+.++
T Consensus       149 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  223 (263)
T PRK06200        149 ----PGGGGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQF  223 (263)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCC
Confidence                3456778999999999999999999987 49999999999999975321           111111     13467


Q ss_pred             CCCHHHHHHHHHHHhccC-CCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQP-KEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~-~~~~~~G~~~~d~~~  308 (339)
                      +.+|+|+|+.++||+++. ....++..+.+|||.
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            899999999999999876 454455555679884

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-38  Score=289.55  Aligned_cols=224  Identities=23%  Similarity=0.301  Sum_probs=191.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++.+|++||||||+|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999999998888887654  34688889999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|++|||||+.....  ..+.+++++++++|+.+++.+++.++|+|+++ +.++||++||..+..           
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~~~-----------  148 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGGFA-----------  148 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhcC-----------
Confidence            8899999999999876544  36778999999999999999999999999877 568999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCC-CeEEEEeeCCcccCCCccCcchhH--HHHHhccCCCHHHHHHHHHHHhc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEK-GIGFYSMHPGWAETPGVAKSMPSF--NERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                       +.|+...|++||+|+.+|+++|+.|+.+. ||+|++|+||+++||+........  .......+.+|+++|+.+++++.
T Consensus       149 -~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~  227 (330)
T PRK06139        149 -AQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLAD  227 (330)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHh
Confidence             45678899999999999999999999875 999999999999999865321111  11112346799999999999987


Q ss_pred             cCCC
Q 019551          292 QPKE  295 (339)
Q Consensus       292 ~~~~  295 (339)
                      .+..
T Consensus       228 ~~~~  231 (330)
T PRK06139        228 RPRA  231 (330)
T ss_pred             CCCC
Confidence            6554

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=278.45  Aligned_cols=236  Identities=24%  Similarity=0.384  Sum_probs=199.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999999998888777777544  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||.......  .+.++|++++++|+.+++.+++++.+.|.++ +.++||++||..+..            
T Consensus        85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~------------  151 (255)
T PRK07523         85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQSAL------------  151 (255)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEccchhcc------------
Confidence            9999999999998754433  5788999999999999999999999999876 568999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|++++.++++++.|++++||+||+|+||+++|++.....  +...+     .+.+++.+|+|+|+.++|
T Consensus       152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  231 (255)
T PRK07523        152 ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVF  231 (255)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            45677899999999999999999999999999999999999999865332  11111     134678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       232 l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        232 LASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             HcCchhcCccCcEEEECCCe
Confidence            99865554444455678874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.4e-37  Score=276.35  Aligned_cols=236  Identities=22%  Similarity=0.295  Sum_probs=197.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.++++++++.+.+.+
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999988888777777543  3468889999999999999999999989


Q ss_pred             CCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          139 KPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      +++|++|||||...+.. ..+.+++++.+++|+.+++.++++++|+|.+. +.++||++||..+..            +.
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~  153 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAEN------------KN  153 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEecccccC------------CC
Confidence            99999999999865433 35778999999999999999999999999765 568999999988763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHHH-----HhccCCCHHHHHHHHHHHhc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNER-----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~-----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      ++...|+++|+|+++++++++.|+.+.||+||+|+||+++|++..... ++....     +.+++.+|+|++++++||++
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  233 (255)
T PRK06113        154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS  233 (255)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            567789999999999999999999999999999999999999866432 222211     23567899999999999997


Q ss_pred             cCCCCCCCcceeeCCCCC
Q 019551          292 QPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~  309 (339)
                      +......+..+.+|||..
T Consensus       234 ~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        234 PAASWVSGQILTVSGGGV  251 (255)
T ss_pred             ccccCccCCEEEECCCcc
Confidence            544444444556688854

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=279.17  Aligned_cols=232  Identities=23%  Similarity=0.293  Sum_probs=191.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+++++++..+++.... +.++.++.+|++|++++++++++    
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----
Confidence            4789999999999999999999999999999999999988888777776543 34688899999999999988765    


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.++|++++++|+.+++.++++++|.|.++ +.++||++||..+.            .
T Consensus        79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss~~~~------------~  145 (259)
T PRK06125         79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIGAAGE------------N  145 (259)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecCcccc------------C
Confidence            478999999999865433  36889999999999999999999999999876 46899999998765            2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----------hhHHH-----HHhccCCCHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----------PSFNE-----RFAGNLRTSE  280 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----------~~~~~-----~~~~~~~~~~  280 (339)
                      +.+++..|+++|+|+++|+++++.|+.++||+||+|+||+++|++.....          ++..+     .+.+++.+|+
T Consensus       146 ~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T PRK06125        146 PDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE  225 (259)
T ss_pred             CCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHH
Confidence            34567889999999999999999999999999999999999999643211          11111     1235678999


Q ss_pred             HHHHHHHHHhccCCCCCCCcce-eeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      |+|++++||+++. ..+.+|.. .+|||.
T Consensus       226 ~va~~~~~l~~~~-~~~~~G~~i~vdgg~  253 (259)
T PRK06125        226 EVADLVAFLASPR-SGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHHcCch-hccccCceEEecCCe
Confidence            9999999999754 44555555 569884

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-37  Score=284.58  Aligned_cols=234  Identities=25%  Similarity=0.282  Sum_probs=192.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||++|||+++|++|+++|++|++++++.+  ..++..+.+...  +.++.++.+|++|.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999887653  334444455433  3468889999999999999999999


Q ss_pred             cCCCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|+||||||.....   ...+.++|++.+++|+.+++.++++++|+|.+   +++||++||..++.         
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~---------  197 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQ---------  197 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccC---------
Confidence            9999999999999975432   23678999999999999999999999999863   47999999988773         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHH-----HhccCCCHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNER-----FAGNLRTSEEGADT  285 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~-----~~~~~~~~~e~A~~  285 (339)
                         +.++...|++||+|+++|+++++.|+.++||+||+|+||+++|++....  .++..+.     +.+++.+|+|+|..
T Consensus       198 ---~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  274 (300)
T PRK06128        198 ---PSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPL  274 (300)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence               4567788999999999999999999999999999999999999986432  1121111     34678899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||+++.....++..+.+|||.
T Consensus       275 ~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        275 YVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             HHHHhCccccCccCcEEeeCCCE
Confidence            99999865444444455678874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-37  Score=277.96  Aligned_cols=236  Identities=23%  Similarity=0.357  Sum_probs=198.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            367999999999999999999999999999999999998888777777543  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.+++++++++|+.+++.+++.++|+|+++ +.++||++||..+..            
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  151 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSEL------------  151 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccC------------
Confidence            999999999999876543  35789999999999999999999999999876 578999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--------hHH-----HHHhccCCCHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--------SFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--------~~~-----~~~~~~~~~~~e~  282 (339)
                      +.++...|+++|+++++++++++.|+.++||+||+|+||+++|++......        ...     ..+.+++.+|+|+
T Consensus       152 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  231 (265)
T PRK07097        152 GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDL  231 (265)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHH
Confidence            345678999999999999999999999999999999999999997643211        111     1124568899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.+++|+++......+..+.+|||.
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCCc
Confidence            99999999865554444444668874

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.9e-37  Score=280.81  Aligned_cols=235  Identities=22%  Similarity=0.278  Sum_probs=193.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.   .+.++.++.+|++|.++++++++.+.+.
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877766666552   1346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||.....    ...+.+++++++++|+.|++.++++++|.|.++ +.++||+++|..+..          
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~----------  160 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCSVASAI----------  160 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecChhhcc----------
Confidence            99999999999986432    236789999999999999999999999999765 568999999987753          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh------H----HHH------HhccCC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------F----NER------FAGNLR  277 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~------~----~~~------~~~~~~  277 (339)
                        +.++...|++||+|+++++++++.|++++||+||+|+||+++|++.....+.      .    ...      +.++..
T Consensus       161 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  238 (280)
T PLN02253        161 --GGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVEL  238 (280)
T ss_pred             --cCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCC
Confidence              2345668999999999999999999999999999999999999875322111      0    000      013357


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|+.++||+++.....++..+.+|||.
T Consensus       239 ~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        239 TVDDVANAVLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             CHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence            8999999999999865555555556779884

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.1e-37  Score=280.89  Aligned_cols=263  Identities=22%  Similarity=0.212  Sum_probs=205.6

Q ss_pred             ccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           54 DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        54 ~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      .|..+++||+++||||++|||+++|++|+++|++|++.+++. +..++..+++...  +.++.++.+|++|.++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~   82 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVA   82 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            345568999999999999999999999999999999999854 4566667777543  3478899999999999999999


Q ss_pred             HHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC------CCCEEEEEcCcccccc
Q 019551          133 RFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAA------PDARVITVSSGGMYTA  204 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~------~~~~Iv~vsS~~~~~~  204 (339)
                      .+.+ ++++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|.++.      ..|+||++||..+.. 
T Consensus        83 ~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-  160 (306)
T PRK07792         83 TAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-  160 (306)
T ss_pred             HHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-
Confidence            9988 9999999999998765432  57789999999999999999999999997531      137999999988763 


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH--HHhccCCCHHHH
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE--RFAGNLRTSEEG  282 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~e~  282 (339)
                                 +.++...|+++|+|+++|+++++.|+.++||+||+|+|| ..|++..........  .......+|+++
T Consensus       161 -----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~~~~~~~~pe~v  228 (306)
T PRK07792        161 -----------GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEAGGIDPLSPEHV  228 (306)
T ss_pred             -----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhhhccCCCCHHHH
Confidence                       345677999999999999999999999999999999999 488875432211110  111234589999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCCCcc----c-c--cc-cccCCHHHHHHHHHHH
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEAPKH----L-K--FA-ATAASHARIDPIVDVL  332 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~~~~----~-~--~~-~~~~~~~~~~~l~~~~  332 (339)
                      |..+.||+++.....++..+.+|||....-    . .  .. ....+.++..+.|+.+
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY  286 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence            999999998655444444556688753311    0 0  11 1446788888888887

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-37  Score=274.73  Aligned_cols=235  Identities=21%  Similarity=0.230  Sum_probs=192.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999988877777666543  246889999999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||......  ..+.++|++++++|+.+++.++++++|+|.++...++||++||..+..            +.+
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~  146 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD------------AGP  146 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc------------CCC
Confidence            999999999754322  367899999999999999999999999997654568999999987763            345


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCccCc---chhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGVAKS---MPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~---~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      +...|++||+|+++|+++|+.|+.+ +||+||+|+||+++|+.....   .++..+.     +.+++.+|+|+|+.+.||
T Consensus       147 ~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  226 (252)
T PRK07677        147 GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFL  226 (252)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Confidence            6678999999999999999999975 699999999999996432211   1111111     235788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++.....++..+.+|+|..
T Consensus       227 ~~~~~~~~~g~~~~~~gg~~  246 (252)
T PRK07677        227 LSDEAAYINGTCITMDGGQW  246 (252)
T ss_pred             cCccccccCCCEEEECCCee
Confidence            98654444444456798854

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=277.58  Aligned_cols=230  Identities=23%  Similarity=0.310  Sum_probs=190.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||++++++|+++|++|++++|+++..          . ..++.++.+|++|.++++++++++.+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------L-PEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------c-CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999986531          0 235788999999999999999999999


Q ss_pred             CCCccEEEEccccccC--C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLEN--N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~--~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||....  .  ...+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+..+         
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~---------  144 (260)
T PRK06523         75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLP---------  144 (260)
T ss_pred             cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCC---------
Confidence            9999999999997532  1  225788999999999999999999999999876 5689999999877632         


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----------hHHH--------HHhc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----------SFNE--------RFAG  274 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----------~~~~--------~~~~  274 (339)
                        ..++...|+++|+++++|+++++.|++++||+||+|+||+++|++.....+           +..+        .+.+
T Consensus       145 --~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  222 (260)
T PRK06523        145 --LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLG  222 (260)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccC
Confidence              122677899999999999999999999999999999999999997542211           1111        1345


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      ++.+|+|+|+.++||+++.....++..+.+|||...
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence            678999999999999987666666666778998644

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.5e-37  Score=274.87  Aligned_cols=223  Identities=14%  Similarity=0.140  Sum_probs=187.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||+++|++|+ +|++|++++|+.+++++..+++.+.. ...+.++.+|++|+++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 59999999999999998888886553 2357889999999999999999999999999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |++|||||+.....  ..+.+.+++.+++|+.+++.+++.++|.|.++..+|+||++||..+..            +.++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~~~  146 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------ARRA  146 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CCcC
Confidence            99999999865433  245667788899999999999999999998764468999999988763            3567


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVS  299 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~  299 (339)
                      ...|++||+|+.+|+++++.|++++||+||+|+||+++|++.....+.      ....+|||+|+.+++++.....   +
T Consensus       147 ~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~------~~~~~pe~~a~~~~~~~~~~~~---~  217 (246)
T PRK05599        147 NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA------PMSVYPRDVAAAVVSAITSSKR---S  217 (246)
T ss_pred             CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC------CCCCCHHHHHHHHHHHHhcCCC---C
Confidence            789999999999999999999999999999999999999976433211      1135899999999999975432   4


Q ss_pred             cceeeCCC
Q 019551          300 GSFYFDRA  307 (339)
Q Consensus       300 G~~~~d~~  307 (339)
                      +.++++++
T Consensus       218 ~~~~~~~~  225 (246)
T PRK05599        218 TTLWIPGR  225 (246)
T ss_pred             ceEEeCcc
Confidence            55666664

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=279.88  Aligned_cols=235  Identities=23%  Similarity=0.247  Sum_probs=184.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++|||| +|||+++|++|+ +|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++ +.+++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            689999998 699999999996 8999999999988887777777543  346888999999999999999988 46789


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc-cC-----------c
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH-LT-----------D  208 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~-~~-----------~  208 (339)
                      +|+||||||+..     ..++|++++++|+.+++.++++++|.|.+   ++++|++||.++.... +.           .
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhcccccccc
Confidence            999999999753     23678999999999999999999999964   3678888887765321 00           0


Q ss_pred             cccc------cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----hHH-----HHHh
Q 019551          209 DLEF------NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----SFN-----ERFA  273 (339)
Q Consensus       209 ~~~~------~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----~~~-----~~~~  273 (339)
                      +...      .....+++..|++||+|+++++++++.|++++||+||+|+||+++|++......    +..     ..+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence            0000      000013467899999999999999999999999999999999999998643211    111     1234


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            67899999999999999865555555556779884

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=8.1e-37  Score=273.15  Aligned_cols=234  Identities=22%  Similarity=0.274  Sum_probs=193.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++...  +.++.++.+|+++.++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998865 555666666666543  34788999999999999999999999999


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||......  ..+.+++++.+++|+.+++.+++++.++|.+++.+++||++||..+.            .+.
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------~~~  147 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------------TPL  147 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc------------CCC
Confidence            9999999999876443  25789999999999999999999999999776456899999998765            345


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHHHHHHHHhcc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ++...|+++|+++++++++++.++.++||+||+|+||+++|++.....++...     .+..++.+|+|+|+.++||++.
T Consensus       148 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  227 (256)
T PRK12743        148 PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSE  227 (256)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            67789999999999999999999999999999999999999986543222111     1235678999999999999975


Q ss_pred             CCCCCCCcce-eeCCCCC
Q 019551          293 PKEKLVSGSF-YFDRAEA  309 (339)
Q Consensus       293 ~~~~~~~G~~-~~d~~~~  309 (339)
                      .. .+.+|.+ .+|||..
T Consensus       228 ~~-~~~~G~~~~~dgg~~  244 (256)
T PRK12743        228 GA-SYTTGQSLIVDGGFM  244 (256)
T ss_pred             cc-cCcCCcEEEECCCcc
Confidence            44 4455555 5698843

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-37  Score=275.96  Aligned_cols=233  Identities=17%  Similarity=0.198  Sum_probs=192.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++      +   . .+.++.++.+|++++++++++++.+.+.
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~---~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T---V-DGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h---h-cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998754      1   1 1346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.+++++.|.|.++.+.++||++||..+..            
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------  140 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------  140 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------
Confidence            999999999999865433  357788999999999999999999999998754568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|+++++|+++++.|++++ |+||+|+||+++|++......  +..+     .+.+++.+|+|+|+.++|
T Consensus       141 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~  219 (252)
T PRK07856        141 PSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLF  219 (252)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence            45678899999999999999999999987 999999999999997543221  1111     123567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCCCCccc
Q 019551          289 LALQPKEKLVSGSFYFDRAEAPKHL  313 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~~~~~~  313 (339)
                      |+++.....++..+.+|||...+.+
T Consensus       220 L~~~~~~~i~G~~i~vdgg~~~~~~  244 (252)
T PRK07856        220 LASDLASYVSGANLEVHGGGERPAF  244 (252)
T ss_pred             HcCcccCCccCCEEEECCCcchHHH
Confidence            9986555444444567998765544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=275.91  Aligned_cols=233  Identities=20%  Similarity=0.286  Sum_probs=197.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||++|||+++|+.|+++|++|++++|+.++.++..+++     +.++.++.+|++|+++++++++++.+.+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988777665554     2357889999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||......  ..+.++++..+++|+.+++.+++++++.|.++..+++||++||..+..            +
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~  146 (257)
T PRK07067         79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------G  146 (257)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------C
Confidence            99999999999875433  257789999999999999999999999997764568999999977652            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----------h-hHHH-----HHhccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----------P-SFNE-----RFAGNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----------~-~~~~-----~~~~~~~~~~  280 (339)
                      .++...|++||++++.++++++.|+.++||+||+|+||+++|++.....          + +...     .+.+++.+|+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (257)
T PRK07067        147 EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPD  226 (257)
T ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHH
Confidence            5677899999999999999999999999999999999999998754311          1 1111     1245788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||++++....++..+.+|||.
T Consensus       227 dva~~~~~l~s~~~~~~~g~~~~v~gg~  254 (257)
T PRK07067        227 DLTGMALFLASADADYIVAQTYNVDGGN  254 (257)
T ss_pred             HHHHHHHHHhCcccccccCcEEeecCCE
Confidence            9999999999976666677778889884

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=8.7e-38  Score=280.34  Aligned_cols=230  Identities=20%  Similarity=0.235  Sum_probs=186.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+.    . +.++.++.+|+++.+++.++++++.+.+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999999998766554332    2 2468889999999999999999999999


Q ss_pred             CCccEEEEccccccCC-C--CCCh----hhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          139 KPVHVLVNNAGVLENN-R--LITS----EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       139 ~~id~lInnAG~~~~~-~--~~~~----~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +++|+||||||+.... .  ..+.    ++|++.+++|+.+++.++++++|.|.+.  +++||+++|..+..        
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~--------  147 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFY--------  147 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceec--------
Confidence            9999999999975321 1  1222    4789999999999999999999999765  37899998887663        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----h---------hHH--HHHhccC
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----P---------SFN--ERFAGNL  276 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~---------~~~--~~~~~~~  276 (339)
                          +.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++.....    +         +..  ..+.+++
T Consensus       148 ----~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  222 (262)
T TIGR03325       148 ----PNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRM  222 (262)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCC
Confidence                34566789999999999999999999987 99999999999999864210    0         101  1245788


Q ss_pred             CCHHHHHHHHHHHhccCCCCC-CCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKL-VSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~-~~G~~~~d~~~  308 (339)
                      .+|+|+|++++||++++...+ ++..+.+|||.
T Consensus       223 ~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       223 PDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             CChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            999999999999998654444 45555679884

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2e-36  Score=279.55  Aligned_cols=276  Identities=22%  Similarity=0.352  Sum_probs=212.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999998888877777432  3468889999999999999999988888


Q ss_pred             CCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCcccccccc--------
Q 019551          139 KPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGMYTAHL--------  206 (339)
Q Consensus       139 ~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~~~~~~--------  206 (339)
                      +++|+||||||+....   ...+.++++..+++|+.|++.+++.++|.|++++. .++||++||........        
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence            8999999999986542   23578899999999999999999999999987633 36999999976543110        


Q ss_pred             --Ccccc-------------ccCCCCcchHHHHHhHHHHHHHHHHHHHHHc-CCCeEEEEeeCCcc-cCCCccCcchh--
Q 019551          207 --TDDLE-------------FNSGSFDGMEQYARNKRVQVALTEKWSEMYK-EKGIGFYSMHPGWA-ETPGVAKSMPS--  267 (339)
Q Consensus       207 --~~~~~-------------~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~v~~v~PG~v-~T~~~~~~~~~--  267 (339)
                        ..++.             ....++.+..+|+.||++.+.+++.+++++. .+||+|++++||+| .|++.......  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  241 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ  241 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH
Confidence              00000             0012345567899999999999999999995 46999999999999 58876543211  


Q ss_pred             -H----HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCC----c-ccccccccCCHHHHHHHHHHHHhhhc
Q 019551          268 -F----NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP----K-HLKFAATAASHARIDPIVDVLRSMAN  337 (339)
Q Consensus       268 -~----~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~----~-~~~~~~~~~~~~~~~~l~~~~~~~~~  337 (339)
                       .    ...+.....++++.++.+++++.++.. ..+|.||.++....    . ....+..+.|.+..++||+.++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~~s~~~~~  320 (322)
T PRK07453        242 KLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWDLSAKLVG  320 (322)
T ss_pred             HHHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHHHHHHHhC
Confidence             1    111122346889999999999876655 35888887443210    0 01234456899999999999999986

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.4e-39  Score=257.09  Aligned_cols=232  Identities=23%  Similarity=0.239  Sum_probs=196.3

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..++.|+.+++||+..|||+++++.|++.|++|+.++|+++.+..+.++.    + ..+..+..|+++++.+.+...   
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p-~~I~Pi~~Dls~wea~~~~l~---   73 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----P-SLIIPIVGDLSAWEALFKLLV---   73 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----C-cceeeeEecccHHHHHHHhhc---
Confidence            44688999999999999999999999999999999999999888776653    2 347888899999776655443   


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                       ..+++|.||||||+....++  ++.+.+++.|++|+.+++..+|.+.+-+..+..+|.||++||.+..           
T Consensus        74 -~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----------  141 (245)
T KOG1207|consen   74 -PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----------  141 (245)
T ss_pred             -ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----------
Confidence             45789999999998765544  7899999999999999999999988877766678889999999887           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------HHHHHhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------FNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~e~A~~v  286 (339)
                       +++.+...||++|+|+.+++|+||.|+++++||||+|.|-.|.|+|-++...+       ....+.+++.+.+|+.+++
T Consensus       142 -R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~  220 (245)
T KOG1207|consen  142 -RPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAV  220 (245)
T ss_pred             -cccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhh
Confidence             56788899999999999999999999999999999999999999998765422       2234567889999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+|+...-.++..+.++||.
T Consensus       221 lfLLSd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  221 LFLLSDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             eeeeecCcCcccCceeeecCCc
Confidence            9999976655555556678774

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=4.2e-37  Score=274.98  Aligned_cols=227  Identities=22%  Similarity=0.299  Sum_probs=188.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLAS----RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~----~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++||||++|||+++|++|++    .|++|++++|+++.+++..+++....++.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999988888888754444578899999999999999999998876


Q ss_pred             CC----ccEEEEccccccCCC--C---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCc
Q 019551          139 KP----VHVLVNNAGVLENNR--L---ITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       139 ~~----id~lInnAG~~~~~~--~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      +.    .|+||||||......  .   .+.+++++.+++|+.+++.+++.++|.|+++. ..++||++||.++.      
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~------  155 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI------  155 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC------
Confidence            64    369999999764321  1   24688999999999999999999999998652 35799999998876      


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhH-----HHHHhccCCC
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSF-----NERFAGNLRT  278 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~-----~~~~~~~~~~  278 (339)
                            .+.+++..|++||+|+++|+++|+.|++++||+||+|+||+|+|++.....     ++.     ...+.+++.+
T Consensus       156 ------~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (256)
T TIGR01500       156 ------QPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVD  229 (256)
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCC
Confidence                  346778899999999999999999999999999999999999999865321     111     1224567899


Q ss_pred             HHHHHHHHHHHhccCCCCCCCccee
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFY  303 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~  303 (339)
                      |+|+|+.++++++  ...+.+|+++
T Consensus       230 p~eva~~~~~l~~--~~~~~~G~~~  252 (256)
T TIGR01500       230 PKVSAQKLLSLLE--KDKFKSGAHV  252 (256)
T ss_pred             HHHHHHHHHHHHh--cCCcCCccee
Confidence            9999999999995  2346677643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-37  Score=270.64  Aligned_cols=217  Identities=15%  Similarity=0.119  Sum_probs=181.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|+++++++++++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999998888887654  245778899999999999999999999


Q ss_pred             CC-CccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NK-PVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~-~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++ ++|+||||||.....   ...+.++|.+.+++|+.+++.+++.++|+|.+++++|+||++||..+.           
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------  148 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----------  148 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----------
Confidence            88 999999999864332   235778899999999999999999999999876457899999996543           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                          +++..|++||+|+.+|+++++.|++++||+||+|+||+++|+...  .++..+..      -+|++.++.||++. 
T Consensus       149 ----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~~~~~~------~~~~~~~~~~l~~~-  215 (227)
T PRK08862        149 ----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAVHWAEI------QDELIRNTEYIVAN-  215 (227)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHHHHHHH------HHHHHhheeEEEec-
Confidence                346789999999999999999999999999999999999998321  12211111      18999999999962 


Q ss_pred             CCCCCCcce
Q 019551          294 KEKLVSGSF  302 (339)
Q Consensus       294 ~~~~~~G~~  302 (339)
                        .+.+|.-
T Consensus       216 --~~~tg~~  222 (227)
T PRK08862        216 --EYFSGRV  222 (227)
T ss_pred             --ccccceE
Confidence              3555543

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-37  Score=276.31  Aligned_cols=236  Identities=22%  Similarity=0.290  Sum_probs=194.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-------GETALSAIRSKTGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++.+++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHH
Confidence            678999999999999999999999999999999998653       34444555433  346888999999999999999


Q ss_pred             HHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +++.+.++++|+||||||......  ..+.+++++++++|+.+++.++++++|+|.++ ++++|+++||..+..+     
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~-----  155 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENPHILTLSPPLNLDP-----  155 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCCEEEEECCchhccc-----
Confidence            999988899999999999865433  35778999999999999999999999999876 5689999999765421     


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCC-cccCCCccCcchhHHHHHhccCCCHHHHHHHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPG-WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~  288 (339)
                           ...+++..|++||+|+++++++++.|++++||+||+|+|| +++|++.......  ..+..++.+|+++|+.+++
T Consensus       156 -----~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~--~~~~~~~~~p~~va~~~~~  228 (273)
T PRK08278        156 -----KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG--DEAMRRSRTPEIMADAAYE  228 (273)
T ss_pred             -----cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc--cccccccCCHHHHHHHHHH
Confidence                 1226778999999999999999999999999999999999 6899764432211  1233467899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      ++++. ....+|.+++|++...
T Consensus       229 l~~~~-~~~~~G~~~~~~~~~~  249 (273)
T PRK08278        229 ILSRP-AREFTGNFLIDEEVLR  249 (273)
T ss_pred             HhcCc-cccceeEEEeccchhh
Confidence            99854 4567899999887544

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.9e-37  Score=301.34  Aligned_cols=231  Identities=21%  Similarity=0.285  Sum_probs=193.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ...||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|+++++++++++.+.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999999988877666544     235677899999999999999999999


Q ss_pred             CCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+....   ...+.++|++++++|+.++++++++++|+|.   +.|+||++||.++..           
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~-----------  406 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSIASLL-----------  406 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECchhhcC-----------
Confidence            99999999999986432   2367899999999999999999999999992   468999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHH-----HHhccCCCHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNE-----RFAGNLRTSEEGADTV  286 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~-----~~~~~~~~~~e~A~~v  286 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.....   +...+     .+.+++.+|+|+|+.+
T Consensus       407 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  485 (520)
T PRK06484        407 -ALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAI  485 (520)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             45778899999999999999999999999999999999999999865321   11111     1235678999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+++.....++..+.+|||.
T Consensus       486 ~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        486 AFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHhCccccCccCcEEEECCCc
Confidence            9999865444444445679884

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-37  Score=276.51  Aligned_cols=227  Identities=23%  Similarity=0.294  Sum_probs=189.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++.+           ..++.++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999876432           135778999999999999999999999


Q ss_pred             CCCccEEEEccccccCC-----------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          138 NKPVHVLVNNAGVLENN-----------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++++|+||||||.....           ...+.++|++++++|+.+++.++++++|+|.++ +.++||++||..+..   
T Consensus        75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~---  150 (266)
T PRK06171         75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLE---  150 (266)
T ss_pred             cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEEEEEccccccC---
Confidence            99999999999975432           125778999999999999999999999999876 568999999988763   


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc-CCCccCcc------------hhHH----
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE-TPGVAKSM------------PSFN----  269 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~------------~~~~----  269 (339)
                               +.++...|+++|+|+++|+++++.|++++||+||+|+||+++ |++.....            .+..    
T Consensus       151 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (266)
T PRK06171        151 ---------GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYT  221 (266)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhc
Confidence                     346678999999999999999999999999999999999997 65532110            1111    


Q ss_pred             ---HHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          270 ---ERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       270 ---~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         ..+.+++.+|+|+|+++.||+++.....++..+.+|||.
T Consensus       222 ~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        222 KTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             ccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence               124567889999999999999866655555566779884

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=269.30  Aligned_cols=233  Identities=22%  Similarity=0.278  Sum_probs=192.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|+++||||++|||.++|++|+++|++|++++|+.+. .+..+++.    +..+.++.+|++++++++++++++.+.
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998764 22233322    345778999999999999999999988


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..            
T Consensus        87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  153 (255)
T PRK06841         87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQAGVV------------  153 (255)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcchhhcc------------
Confidence            899999999999875433  25778999999999999999999999999876 568999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HH-----HHHhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FN-----ERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~-----~~~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|+++|+|+++++++++.|++++||+||+|+||+++|++....... ..     ..+.+++.+|+|+|+++++|
T Consensus       154 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        154 ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFL  233 (255)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            4567789999999999999999999999999999999999999976543211 11     11345788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++....++..+.+|||.
T Consensus       234 ~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        234 ASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             cCccccCccCCEEEECCCc
Confidence            9865555445555679874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=269.08  Aligned_cols=235  Identities=20%  Similarity=0.292  Sum_probs=198.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.++.+|+++++++.++++++...
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999988888777777553  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||.......  .+.++|++.+++|+.+++.+++++++.|.++ +.++||++||..+.            .
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~------------~  152 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAITSIAGQ------------V  152 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEeechhc------------c
Confidence            9999999999998664433  5778999999999999999999999999776 56899999998776            2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|+++|+++.+++++++.|++++||+||+|+||+++|++.....  +...+.     +.+++.+|+|++++++|
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  232 (256)
T PRK06124        153 ARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVF  232 (256)
T ss_pred             CCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            45677899999999999999999999999999999999999999754322  111111     23567899999999999


Q ss_pred             HhccCCCCCCCcce-eeCCCC
Q 019551          289 LALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      |++++.. +.+|.+ .+|||.
T Consensus       233 l~~~~~~-~~~G~~i~~dgg~  252 (256)
T PRK06124        233 LASPAAS-YVNGHVLAVDGGY  252 (256)
T ss_pred             HcCcccC-CcCCCEEEECCCc
Confidence            9986554 555555 568873

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-37  Score=279.66  Aligned_cols=221  Identities=21%  Similarity=0.273  Sum_probs=189.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++..   +..+..+.+|++|.++++++++++.+.
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888877766532   345777789999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.+++.+++.++|.|.++  .|+||++||.++..            
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~------------  148 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFA------------  148 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcC------------
Confidence            999999999999876443  36789999999999999999999999999764  58999999988773            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh------HHH---HHhccCCCHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNE---RFAGNLRTSEEGADTV  286 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~---~~~~~~~~~~e~A~~v  286 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.......      ...   .+.+++.+|+|+|+.+
T Consensus       149 ~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i  228 (296)
T PRK05872        149 AAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAF  228 (296)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHH
Confidence            4577889999999999999999999999999999999999999986543221      111   1235678999999999


Q ss_pred             HHHhccCCC
Q 019551          287 LWLALQPKE  295 (339)
Q Consensus       287 ~~l~s~~~~  295 (339)
                      ++++++...
T Consensus       229 ~~~~~~~~~  237 (296)
T PRK05872        229 VDGIERRAR  237 (296)
T ss_pred             HHHHhcCCC
Confidence            999975443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-36  Score=268.92  Aligned_cols=232  Identities=19%  Similarity=0.242  Sum_probs=187.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||+++|+.|+++|++|++++++ .++.+....++    + .++.++.+|++|+++++++++++.+.
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----G-DRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999987654 44443333322    2 46888999999999999999999888


Q ss_pred             CCC-ccEEEEccccccC--------CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          138 NKP-VHVLVNNAGVLEN--------NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       138 ~~~-id~lInnAG~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++. +|++|||||....        ....+.+++++.+++|+.+++.++++++|.|.+. +.++||++||....      
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~------  150 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-GFGRIINIGTNLFQ------  150 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-CCeEEEEECCcccc------
Confidence            887 9999999987421        1235778999999999999999999999999765 56899999997654      


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHH-----HHhccCCCHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-----~~~~~~~~~~e~  282 (339)
                            .+..+...|++||+|+++|+++++.|++++||+||+|+||+++|+......+ ...+     .+.+++.+|+|+
T Consensus       151 ------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  224 (253)
T PRK08642        151 ------NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEF  224 (253)
T ss_pred             ------CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHH
Confidence                  2344567899999999999999999999999999999999999985543222 2111     124578899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||++++....++..+.+|||.
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        225 ADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHcCchhcCccCCEEEeCCCe
Confidence            99999999876665556666779884

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=9.7e-37  Score=280.71  Aligned_cols=214  Identities=25%  Similarity=0.249  Sum_probs=176.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC--HHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS--ITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  136 (339)
                      ..|++++|||||+|||+++|++|+++|++|++++|+++++++..+++.+.+++.++..+.+|+++  .+.++++.+.+. 
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~-  129 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE-  129 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc-
Confidence            35899999999999999999999999999999999999999998888876655678889999985  333444444332 


Q ss_pred             CCCCccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                       ..++|+||||||+....    ...+.+++++++++|+.|++.+++.++|.|.++ +.|+||++||.++...        
T Consensus       130 -~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~--------  199 (320)
T PLN02780        130 -GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAAIVI--------  199 (320)
T ss_pred             -CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccC--------
Confidence             12577999999987532    236788999999999999999999999999876 5789999999887531        


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                        .+.|+...|++||+|+++|+++|+.|++++||+|++|+||+|+|++.......      -...+|+++|+.++..+.
T Consensus       200 --~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~~------~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        200 --PSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRSS------FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             --CCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCCC------CCCCCHHHHHHHHHHHhC
Confidence              12467889999999999999999999999999999999999999986521110      113589999999999884

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=269.61  Aligned_cols=236  Identities=19%  Similarity=0.180  Sum_probs=195.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+..++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998888877777766554357899999999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||||......  ..+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..            +.+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~------------~~~  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV------------GSK  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc------------CCC
Confidence            999999999876543  357789999999999999999999999998763368999999977652            235


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc-cCCCccCcchh-----------HHH-----HHhccCCCHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPS-----------FNE-----RFAGNLRTSEE  281 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~-----------~~~-----~~~~~~~~~~e  281 (339)
                      ....|++||+|+++++++++.|++++||+||+|+||++ .|++.....+.           ..+     .+.+++.+|+|
T Consensus       150 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  229 (259)
T PRK12384        150 HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQD  229 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHH
Confidence            56789999999999999999999999999999999975 66654322211           111     13467789999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++++++|+++.....++..+.+|+|+
T Consensus       230 v~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        230 VLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHHHHHHcCcccccccCceEEEcCCE
Confidence            999999999865544445557788875

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.4e-36  Score=266.02  Aligned_cols=235  Identities=20%  Similarity=0.245  Sum_probs=194.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||+++|++|+++|++|++.. |+..+.++..+++...  +.++..+.+|++|.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999988854 4555555555555433  346788899999999999999999998


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.++|++++++|+.+++.++++++|.|.++ +.++||++||..+..            
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------------  145 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQK------------  145 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEechhccC------------
Confidence            999999999999865433  36788999999999999999999999999766 568999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|+++|+++++++++++.|+.++||++|+|+||+++|++.....++..+.     +..++.+|+++++.++||+
T Consensus       146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~  225 (246)
T PRK12938        146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA  225 (246)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHc
Confidence            35677899999999999999999999999999999999999999876443332222     2356789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|++.
T Consensus       226 ~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        226 SEESGFSTGADFSLNGGL  243 (246)
T ss_pred             CcccCCccCcEEEECCcc
Confidence            876665556666778874

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=270.68  Aligned_cols=237  Identities=23%  Similarity=0.309  Sum_probs=192.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+.+ ..+..+++...  +.++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999874 34444455432  346788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.+++++.+++|+.+++.+++.++|.|.+. +.++||++||..+..           .
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~-----------~  147 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDM-----------V  147 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhcc-----------c
Confidence            999999999999865443  35778899999999999999999999999765 468999999976632           1


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--------hhHHHH-----HhccCCCHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------PSFNER-----FAGNLRTSEEG  282 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------~~~~~~-----~~~~~~~~~e~  282 (339)
                      +.++...|+++|+++++++++++.|++++||+||+|+||+++|++.....        ......     +.+++.+|+|+
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v  227 (263)
T PRK08226        148 ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEV  227 (263)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHH
Confidence            34567789999999999999999999999999999999999999764321        111111     23567899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+.++||+++......+..+.+|||..
T Consensus       228 a~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        228 GELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             HHHHHHHcCchhcCCcCceEeECCCcc
Confidence            999999998655444444556799853

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=272.07  Aligned_cols=220  Identities=24%  Similarity=0.287  Sum_probs=187.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            377999999999999999999999999999999999998888887777644  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.+++.+++.++|.|.+++.+|+||++||.++..            
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~------------  148 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV------------  148 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc------------
Confidence            999999999999865443  367889999999999999999999999998774478999999988773            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh------H-------HH-HHhccCCCHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------F-------NE-RFAGNLRTSEE  281 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~------~-------~~-~~~~~~~~~~e  281 (339)
                      +.++...|++||+|+.+|+++|+.|++++||+|++|+||+++|++.......      .       .. .......+|+|
T Consensus       149 ~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (275)
T PRK05876        149 PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDD  228 (275)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHH
Confidence            4567789999999999999999999999999999999999999976432100      0       00 01123578999


Q ss_pred             HHHHHHHHhc
Q 019551          282 GADTVLWLAL  291 (339)
Q Consensus       282 ~A~~v~~l~s  291 (339)
                      +|+.++..+.
T Consensus       229 va~~~~~ai~  238 (275)
T PRK05876        229 IAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=269.65  Aligned_cols=235  Identities=24%  Similarity=0.304  Sum_probs=193.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++. +..+++...  +.++.++.+|+++.++++++++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999998776 556666544  34688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .++++|++|||||....... .+.++|++.+++|+.+++.+++.++|.|++.  .++||++||..+..            
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~------------  145 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALT------------  145 (258)
T ss_pred             hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhcc------------
Confidence            99999999999997543322 3348899999999999999999999998754  48999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---h--h-HHHH-----Hh-ccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---P--S-FNER-----FA-GNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~--~-~~~~-----~~-~~~~~~~e~A  283 (339)
                      +.++...|++||+++++++++++.|+.++||+||+|+||+++|++.....   +  . ....     +. .++.+|+|+|
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  225 (258)
T PRK08628        146 GQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIA  225 (258)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHH
Confidence            34567899999999999999999999999999999999999999754311   1  1 1111     11 3578999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++|++++......+..+++||+.
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        226 DTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHHhChhhccccCceEEecCCc
Confidence            9999999865544455556778874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=265.22  Aligned_cols=226  Identities=16%  Similarity=0.166  Sum_probs=181.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||+++|++|+++|++|++++|++++..   +++...    .+.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            589999999999999999999999999999999876543   233221    2577899999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCccccccCCCC
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      +|++|||||......  ..+.++|++++++|+.+++.+++.++|.|.+.. +.++||++||..+.            .+.
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~------------~~~  142 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE------------KGS  142 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc------------cCC
Confidence            999999999864432  246789999999999999999999999998752 25799999998765            245


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chh--HHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPS--FNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~--~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      +++..|++||+|+++|+++++.|+++ +||||+|+||++.|+..... ...  ..+.+.+++.+|+|+|+.+.||++  .
T Consensus       143 ~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~  219 (236)
T PRK06483        143 DKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--S  219 (236)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--C
Confidence            66789999999999999999999987 59999999999988643211 000  111234567899999999999996  3


Q ss_pred             CCCCCcceeeCCCC
Q 019551          295 EKLVSGSFYFDRAE  308 (339)
Q Consensus       295 ~~~~~G~~~~d~~~  308 (339)
                      ...++..+.+|||.
T Consensus       220 ~~~~G~~i~vdgg~  233 (236)
T PRK06483        220 CYVTGRSLPVDGGR  233 (236)
T ss_pred             CCcCCcEEEeCccc
Confidence            33444455679884

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.9e-36  Score=267.87  Aligned_cols=233  Identities=22%  Similarity=0.307  Sum_probs=190.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||+++||||++|||+++|+.|+++|++|++++|+.++.++..+++     +.++.++.+|+++.++++++++++.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999887666544432     23678899999999999999999999


Q ss_pred             CCCCccEEEEccccccCC--C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGVLENN--R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~--~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .++++|++|||||.....  .  ..+.++|++.+++|+.+++.++++++|+|.+.  .++||++||..+..         
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~---------  149 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQ---------  149 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcC---------
Confidence            999999999999987532  1  25778999999999999999999999999764  48999999987763         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHH-----HHHhccCCCHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFN-----ERFAGNLRTSEEGADTV  286 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~-----~~~~~~~~~~~e~A~~v  286 (339)
                         +.++...|++||+|+++++++++.|+.+ +|+||+|+||+++|++...... ...     ..+.+++.+|+|+|+.+
T Consensus       150 ---~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  225 (255)
T PRK05717        150 ---SEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMV  225 (255)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence               3456778999999999999999999976 4999999999999987543211 111     12346778999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++++++......+..+.+||+..
T Consensus       226 ~~l~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        226 AWLLSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             HHHcCchhcCccCcEEEECCCce
Confidence            99997654444444566788754

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.3e-36  Score=267.54  Aligned_cols=246  Identities=16%  Similarity=0.209  Sum_probs=193.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|+.|+++|++|++++|+++++++..+++....+...+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999888888887655444567778999999999999999999999


Q ss_pred             CCccEEEEccccccC-----CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          139 KPVHVLVNNAGVLEN-----NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       139 ~~id~lInnAG~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +++|+||||||....     ....+.++++..+++|+.+++.++++++|.|+++ +.++||++||..+...+...  ...
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~--~~~  158 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSIYGVVAPKFE--IYE  158 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEechhhhccccch--hcc
Confidence            999999999986432     1236788999999999999999999999999876 56799999998765321100  001


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-HHhccCCCHHHHHHHHHHHhcc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-RFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ..+......|++||+++++++++++.|+.++||+||+|+||++.|+........... .+..++.+|+|+|+.+++++++
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (256)
T PRK09186        159 GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSD  238 (256)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheecc
Confidence            111122347999999999999999999999999999999999988652211111111 1234678999999999999986


Q ss_pred             CCCCCCCcce-eeCCCC
Q 019551          293 PKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~-~~d~~~  308 (339)
                      ... +.+|.. .+|+|.
T Consensus       239 ~~~-~~~g~~~~~~~g~  254 (256)
T PRK09186        239 QSK-YITGQNIIVDDGF  254 (256)
T ss_pred             ccc-cccCceEEecCCc
Confidence            544 455555 568874

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=265.60  Aligned_cols=235  Identities=22%  Similarity=0.340  Sum_probs=196.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|+++||||++|||+++++.|+++|++|++++|+++++++..+++....  .++.++.+|+++.++++++++++.+.
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG--GAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3779999999999999999999999999999999999988887777765442  36888999999999999999999988


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-------CCEEEEEcCccccccccCc
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-------DARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-------~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++++|++|||||......  ..+.++++.++++|+.+++.++++++|.|.++..       .++||++||..+..     
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----  158 (258)
T PRK06949         84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-----  158 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-----
Confidence            999999999999865433  2467889999999999999999999999976532       47999999987762     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHHH-----HhccCCCHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNER-----FAGNLRTSEEG  282 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~-----~~~~~~~~~e~  282 (339)
                             +.+...+|+++|++++.++++++.|++++||+|++|+||+++|++....... ....     +.+++..|+|+
T Consensus       159 -------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  231 (258)
T PRK06949        159 -------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDL  231 (258)
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHH
Confidence                   3456778999999999999999999999999999999999999986533211 1111     23578899999


Q ss_pred             HHHHHHHhccCCCCCCCcce-eeCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~-~~d~~  307 (339)
                      |+.++||+++.. .+.+|.+ .+|||
T Consensus       232 ~~~~~~l~~~~~-~~~~G~~i~~dgg  256 (258)
T PRK06949        232 DGLLLLLAADES-QFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHhChhh-cCCCCcEEEeCCC
Confidence            999999998544 4566666 45886

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=265.60  Aligned_cols=234  Identities=21%  Similarity=0.242  Sum_probs=195.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998887777776543  3468899999999999999999999999


Q ss_pred             CCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|++|||||.....   ...+.+++++.+++|+.+++.+++++.+.|.+.  +++||++||..+.            .
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~------------~  146 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLR------------H  146 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhc------------c
Confidence            9999999999976432   235789999999999999999999999999765  4799999998775            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHH-----HHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNE-----RFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~-----~~~~~~~~~  279 (339)
                      +.++...|+++|++++.++++++.|++++||+||+|+||++.|++.....           +....     .+.+++.+|
T Consensus       147 ~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T PRK07890        147 SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTD  226 (258)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCH
Confidence            45677899999999999999999999999999999999999998754211           11111     123457789


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+++++++++.....++..+.+|+|.
T Consensus       227 ~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        227 DEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            99999999999865444444445679885

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-35  Score=263.25  Aligned_cols=235  Identities=21%  Similarity=0.266  Sum_probs=194.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|+++||||++|||++++++|+++|++|++ .+|+.++.++..+++...  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999876 578888777777777654  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.++++..+++|+.+++.++++++|.|.++ +.++||++||.....            
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~------------  146 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSLGSIR------------  146 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcc------------
Confidence            999999999999765433  35778899999999999999999999999876 568999999976652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|+++++|+++++.|+.+.||++|+|+||+++|++.....  ....+.     +.+++.+++|+|+.+++
T Consensus       147 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  226 (250)
T PRK08063        147 YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLF  226 (250)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            34667899999999999999999999999999999999999998764321  111111     12457899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++++.....+..+.+|||.
T Consensus       227 ~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        227 LCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HcCchhcCccCCEEEECCCe
Confidence            99865554455555678875

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-36  Score=276.36  Aligned_cols=222  Identities=24%  Similarity=0.278  Sum_probs=190.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++.+.+.
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888888887654  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.+++.++|+|+++ +.++||++||..++.            
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~------------  149 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYR------------  149 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhcc------------
Confidence            999999999999865443  36889999999999999999999999999876 568999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcC--CCeEEEEeeCCcccCCCccCcchhH--HHHHhccCCCHHHHHHHHHHHhc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSF--NERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      +.+....|++||+++++|+++++.|+..  .+|+|++|+||+++||+........  ...+..++.+|+|+|+.++++++
T Consensus       150 ~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~  229 (334)
T PRK07109        150 SIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAE  229 (334)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHh
Confidence            4567789999999999999999999975  4799999999999999754321111  11123456799999999999998


Q ss_pred             cCC
Q 019551          292 QPK  294 (339)
Q Consensus       292 ~~~  294 (339)
                      ++.
T Consensus       230 ~~~  232 (334)
T PRK07109        230 HPR  232 (334)
T ss_pred             CCC
Confidence            653

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=264.56  Aligned_cols=234  Identities=24%  Similarity=0.320  Sum_probs=192.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.+.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877776666544  235788999999999999999999988


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.++++++|.|+++  +++||++||..+..            
T Consensus        84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~------------  149 (264)
T PRK07576         84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFV------------  149 (264)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhcc------------
Confidence            899999999998754433  35778899999999999999999999999754  48999999987752            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc-CCCccCcchh--HH-----HHHhccCCCHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE-TPGVAKSMPS--FN-----ERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~~--~~-----~~~~~~~~~~~e~A~~v~  287 (339)
                      +.++...|+++|+++++|+++++.|+.++||+|++|+||+++ |+......+.  ..     ..+.+++.+|+|+|+.++
T Consensus       150 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  229 (264)
T PRK07576        150 PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAAL  229 (264)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            456788999999999999999999999999999999999997 5533222111  11     112356788999999999


Q ss_pred             HHhccCCCCCCCcce-eeCCCC
Q 019551          288 WLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      +|++++.. +.+|.+ .+||+.
T Consensus       230 ~l~~~~~~-~~~G~~~~~~gg~  250 (264)
T PRK07576        230 FLASDMAS-YITGVVLPVDGGW  250 (264)
T ss_pred             HHcChhhc-CccCCEEEECCCc
Confidence            99975444 555655 568875

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.8e-36  Score=292.47  Aligned_cols=233  Identities=25%  Similarity=0.336  Sum_probs=193.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999988877666554     2457789999999999999999999999


Q ss_pred             CCccEEEEccccccC----CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          139 KPVHVLVNNAGVLEN----NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +++|+||||||+..+    ....+.++|++++++|+.+++.++++++|+|++++.+++||++||..+..           
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~-----------  146 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV-----------  146 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC-----------
Confidence            999999999998432    12367899999999999999999999999998764455999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------HH-HHHhccCCCHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------FN-ERFAGNLRTSEEGADTV  286 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~-~~~~~~~~~~~e~A~~v  286 (339)
                       +.++...|+++|+|+.+|+++++.|+.++||+|++|+||+++|++.......       .. ..+.+++.+|+++|+.+
T Consensus       147 -~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v  225 (520)
T PRK06484        147 -ALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAV  225 (520)
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHH
Confidence             4567789999999999999999999999999999999999999986532111       00 11234577999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||++++.....+..+.+|++.
T Consensus       226 ~~l~~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        226 FFLASDQASYITGSTLVVDGGW  247 (520)
T ss_pred             HHHhCccccCccCceEEecCCe
Confidence            9999865554444444568764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-35  Score=263.04  Aligned_cols=234  Identities=22%  Similarity=0.269  Sum_probs=188.8

Q ss_pred             cCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecC-----------chhHHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           59 IEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRS-----------KEKGETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        59 l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      +++|++|||||++  |||.++|++|+++|++|++++|+           .+......+++...  +.+++++.+|+++.+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   80 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            6789999999994  99999999999999999999998           22222233333322  346889999999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT  203 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~  203 (339)
                      ++.++++++.+.++++|+||||||......  ..+.+++++.+++|+.+++.++++++|.|.+. ..++||++||..+..
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~  159 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-AGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CCeEEEEECCccccC
Confidence            999999999999999999999999865443  25778899999999999999999999999765 568999999987763


Q ss_pred             cccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH--HHHhccCCCHHH
Q 019551          204 AHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN--ERFAGNLRTSEE  281 (339)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~e  281 (339)
                                  +.++...|++||+|+++++++++.|+.++||+|++|+||+++|++.........  ..+..++.+|+|
T Consensus       160 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  227 (256)
T PRK12748        160 ------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVD  227 (256)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHH
Confidence                        456778999999999999999999999999999999999999987553321111  112345788999


Q ss_pred             HHHHHHHHhccCCCCCCCcce-eeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      +|+.+.|++++... ..+|.+ .+|+|.
T Consensus       228 ~a~~~~~l~~~~~~-~~~g~~~~~d~g~  254 (256)
T PRK12748        228 AARLIAFLVSEEAK-WITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHhCcccc-cccCCEEEecCCc
Confidence            99999999985443 445555 568774

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.3e-36  Score=253.64  Aligned_cols=230  Identities=22%  Similarity=0.367  Sum_probs=195.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||.+++||+.||||++++++|+++|..+.++..+.|. .+...++++.+|...+.+++||+++..++++.++++...
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998888877776 556778888889899999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|.+|++||+||+..      +.+|++.+++|+.|.+.-+..++|+|.+++  ++|.|||+||..+.            .
T Consensus        81 fg~iDIlINgAGi~~------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL------------~  142 (261)
T KOG4169|consen   81 FGTIDILINGAGILD------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL------------D  142 (261)
T ss_pred             hCceEEEEccccccc------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc------------C
Confidence            999999999999975      567999999999999999999999998875  67999999999998            4


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHH--HcCCCeEEEEeeCCcccCCCccCcc---------hhHHHHHh-ccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEM--YKEKGIGFYSMHPGWAETPGVAKSM---------PSFNERFA-GNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~---------~~~~~~~~-~~~~~~~e~A  283 (339)
                      |.|..+.|++||+++.+|||++|.+  |.+.||++++||||+++|++.....         +...+.+. -...+|.++|
T Consensus       143 P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a  222 (261)
T KOG4169|consen  143 PMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCA  222 (261)
T ss_pred             ccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHH
Confidence            5788899999999999999999875  5577999999999999998764331         11222222 2356899999


Q ss_pred             HHHHHHhccCCCCCCCccee-eCCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFY-FDRAEAP  310 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~-~d~~~~~  310 (339)
                      ..++.++..    --+|.+| +|.+..+
T Consensus       223 ~~~v~aiE~----~~NGaiw~v~~g~l~  246 (261)
T KOG4169|consen  223 INIVNAIEY----PKNGAIWKVDSGSLE  246 (261)
T ss_pred             HHHHHHHhh----ccCCcEEEEecCcEE
Confidence            999999864    2356655 5777543

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.5e-35  Score=262.93  Aligned_cols=232  Identities=24%  Similarity=0.232  Sum_probs=194.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||++++++|++.|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988777777776543  3468899999999999999999999999999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||......  ..+.+++++.+++|+.+++.+++.+++.|++.+.+++||++||..+..            +.++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~  146 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE------------GNPI  146 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC------------CCCC
Confidence            99999999865443  357889999999999999999999999998875568999999987763            4567


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-----------HH-----HHhccCCCHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-----------NE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----------~~-----~~~~~~~~~~e~A  283 (339)
                      ...|+++|+++++|+++++.|+++.||+|++|+||+++|++........           ..     .+.+++.+|+|++
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  226 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVA  226 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHH
Confidence            8899999999999999999999999999999999999999754322110           01     1235688999999


Q ss_pred             HHHHHHhccCCCCCCCcce-eeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      ++++||++++.. ..+|.+ .+|||.
T Consensus       227 ~~~~~l~~~~~~-~~~g~~~~~d~g~  251 (254)
T TIGR02415       227 GLVSFLASEDSD-YITGQSILVDGGM  251 (254)
T ss_pred             HHHHhhcccccC-CccCcEEEecCCc
Confidence            999999986544 455655 458873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=263.50  Aligned_cols=237  Identities=22%  Similarity=0.230  Sum_probs=195.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|+++++++.++++++.+.+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999988888777777543  3468889999999999999999999988


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||......  ..+.+++++++++|+.+++.+++++.|+|.+..+.++||++||..+..            +
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  153 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------A  153 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------C
Confidence            99999999999765433  257789999999999999999999999998754678999999987763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      .++...|++||+++++++++++.|+.+ +|+||+|+||++.|++.....  +.....     +..++.+|+|+|+.++|+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (263)
T PRK07814        154 GRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYL  232 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            567789999999999999999999987 699999999999998754321  121111     234567899999999999


Q ss_pred             hccCCCCCCCcceeeCCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      +++......+..+.+|++...
T Consensus       233 ~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        233 ASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             cCccccCcCCCEEEECCCccC
Confidence            975444344444456877544

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.2e-35  Score=259.96  Aligned_cols=230  Identities=20%  Similarity=0.267  Sum_probs=187.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++||||++|||+++|+.|+++|++|++++|+ .+.++...+++.+.  +.++.++.+|++|.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 45556666666544  34688999999999999999999988899999


Q ss_pred             EEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHH-HHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          143 VLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       143 ~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l-~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|||||......  ..+.++|+.++++|+.+++.+++.++ |.++++ +.++||++||.++..            +.++
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~------------~~~~  145 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGVM------------GNRG  145 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhcc------------CCCC
Confidence            9999999876543  25788999999999999999999875 444444 568999999987763            3566


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH----HHhccCCCHHHHHHHHHHHhccCCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE----RFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      ...|+++|+++.+++++++.|+.++||+|++|+||+++|++.....+....    .+.+++.+|+|+|+.++||++++..
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  225 (239)
T TIGR01831       146 QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGAS  225 (239)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            789999999999999999999999999999999999999987643322111    1346788999999999999986555


Q ss_pred             CCCCcceeeCCCC
Q 019551          296 KLVSGSFYFDRAE  308 (339)
Q Consensus       296 ~~~~G~~~~d~~~  308 (339)
                      ..++..+.+|||.
T Consensus       226 ~~~g~~~~~~gg~  238 (239)
T TIGR01831       226 YVTRQVISVNGGM  238 (239)
T ss_pred             CccCCEEEecCCc
Confidence            4444444668874

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-35  Score=260.50  Aligned_cols=237  Identities=22%  Similarity=0.305  Sum_probs=197.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999998888777777544  24688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|++|||+|......  ..+.++++..+++|+.+++.+++.+.|.|.++ +.+++|++||..+..           
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  148 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASDTALW-----------  148 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECchhhcc-----------
Confidence            8899999999999876543  35778899999999999999999999999876 568999999987763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHH-----HHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                       +.+....|+++|++++++++.++.++++++|+|++|+||+++|++...... ....     .+..++.+|+|+|+.+++
T Consensus       149 -~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        149 -GAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLF  227 (250)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             345677899999999999999999999999999999999999998754322 1111     123567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++..+.....+..+.+|||.
T Consensus       228 l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        228 LLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HhCccccCccCcEEEECCCc
Confidence            99754443344444568874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.4e-35  Score=258.52  Aligned_cols=232  Identities=27%  Similarity=0.343  Sum_probs=195.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||++|||++++++|+++|++|++++|++++.++...++..   +.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999999887777666644   3468899999999999999999998888


Q ss_pred             CCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|++|||||......   ..+.+++++.+++|+.+++.+++.+++.|.++ +.+++|++||..+..            
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  146 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVASTAGLR------------  146 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhcC------------
Confidence            99999999999854332   35788999999999999999999999999876 578999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----hHHHHH-----hccCCCHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----SFNERF-----AGNLRTSEEGADTV  286 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----~~~~~~-----~~~~~~~~e~A~~v  286 (339)
                      +.++...|+.+|++++.++++++.++++.||+|++++||+++|++......    .....+     .+++.+|+|+|+++
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (251)
T PRK07231        147 PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAA  226 (251)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            456788999999999999999999999889999999999999998654332    211111     34567899999999


Q ss_pred             HHHhccCCCCCCCcce-eeCCC
Q 019551          287 LWLALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~-~~d~~  307 (339)
                      ++|++++.. ..+|.+ .+|||
T Consensus       227 ~~l~~~~~~-~~~g~~~~~~gg  247 (251)
T PRK07231        227 LFLASDEAS-WITGVTLVVDGG  247 (251)
T ss_pred             HHHhCcccc-CCCCCeEEECCC
Confidence            999975544 455554 56886

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=259.56  Aligned_cols=230  Identities=25%  Similarity=0.338  Sum_probs=190.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.+++..+++.+.+.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999987666555444     2467889999999999999999999988


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||......  ..+.+++++.+++|+.+++.++++++|+|.+   .+++|+++|..+..            +
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~------------~  143 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHI------------G  143 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhcc------------C
Confidence            99999999999865443  3578899999999999999999999999853   47888888876652            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHH-----HhccCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNER-----FAGNLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~-----~~~~~~~~~e~A~~  285 (339)
                      .++...|+++|+++++++++++.|++++||+|++|+||+++||+....      .+...+.     +.+++.+|+|+|++
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  223 (249)
T PRK06500        144 MPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKA  223 (249)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            466789999999999999999999999999999999999999975421      1111111     23457799999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||++++....++..+.+|||.
T Consensus       224 ~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        224 VLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             HHHHcCccccCccCCeEEECCCc
Confidence            99999866665666667789884

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=7.1e-35  Score=257.31  Aligned_cols=226  Identities=20%  Similarity=0.262  Sum_probs=179.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ .++.++..+++       .+.++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH---
Confidence            3679999999999999999999999999999988764 44444332221       245778999999988877654   


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       ++++|++|||||......  ..+.++|++.+++|+.+++.+++++++.|++   .++||++||..+..           
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----------  137 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDR-----------  137 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEecccccc-----------
Confidence             478999999999865433  3578899999999999999999999999853   48999999977632           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH----HHhccCCCHHHHHHHHHHHh
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      .+.++...|+++|+++++++++++.|++++||+||+|+||+++|++.....+....    .+.+++.+|+|+|+.++||+
T Consensus       138 ~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~  217 (237)
T PRK12742        138 MPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLA  217 (237)
T ss_pred             CCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            23466789999999999999999999999999999999999999986543221111    12467889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....++..+.+|||.
T Consensus       218 s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        218 GPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CcccCcccCCEEEeCCCc
Confidence            865554455555679873

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-35  Score=264.37  Aligned_cols=235  Identities=21%  Similarity=0.259  Sum_probs=191.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||.++|++|+++|++|++++|+.+. .++..+.+...  +.++.++.+|++|.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998643 44444444322  3468889999999999999999999


Q ss_pred             cCCCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|+||||||.....   ...+.++|++.+++|+.+++.+++++++.|++   .++||++||..++.         
T Consensus       120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~---------  187 (290)
T PRK06701        120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYE---------  187 (290)
T ss_pred             HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccC---------
Confidence            9889999999999976432   23677899999999999999999999999853   47899999988763         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHHH-----HhccCCCHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                         +.++...|++||+|++.++++++.++.++||+|++|+||+++|++...... +....     +.+++.+|+|+|+++
T Consensus       188 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  264 (290)
T PRK06701        188 ---GNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAY  264 (290)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence               345667899999999999999999999999999999999999997654321 11111     235678899999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+++......+..+.+|||.
T Consensus       265 ~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        265 VFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHcCcccCCccCcEEEeCCCc
Confidence            9999865554444445678874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.6e-35  Score=260.31  Aligned_cols=227  Identities=24%  Similarity=0.340  Sum_probs=189.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.         +...  +.++.++.+|++|.++++++++++.+.
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999986         1111  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.++++++|.|+++ +.++||++||..+..            
T Consensus        74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~------------  140 (252)
T PRK08220         74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHV------------  140 (252)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCchhcc------------
Confidence            999999999999875443  35778999999999999999999999999876 568999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----------HHH-----HHhccCCCHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----------FNE-----RFAGNLRTSE  280 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~-----~~~~~~~~~~  280 (339)
                      +.++...|++||+++++++++++.|++++||+||+|+||+++|++.......          ..+     .+.+++.+|+
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (252)
T PRK08220        141 PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQ  220 (252)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHH
Confidence            3566789999999999999999999999999999999999999975432110          001     1235688999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||+++.....++..+.+|||.
T Consensus       221 dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        221 EIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            9999999999866555555566779884

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-35  Score=260.90  Aligned_cols=235  Identities=23%  Similarity=0.286  Sum_probs=194.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||++++++|+++|++|++++|++++.++..+++.+.  +.++.++.+|++|.++++++++++...
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888888777554  346888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.++++..+++|+.+++.+++.+++.|.+..+.++||++||..+..            
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~------------  149 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE------------  149 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC------------
Confidence            899999999999875443  256788999999999999999999999994333678999999976652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-----------HHH-H-----hccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-----------NER-F-----AGNLRT  278 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----------~~~-~-----~~~~~~  278 (339)
                      +.++...|+++|+++++++++++.++++.||++++|+||+++|++.....+..           ... +     .+.+.+
T Consensus       150 ~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (262)
T PRK13394        150 ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTT  229 (262)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCC
Confidence            34566789999999999999999999999999999999999999754332211           111 1     245789


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcc-eeeCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGS-FYFDRA  307 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~-~~~d~~  307 (339)
                      ++|++++++++++.+.. ..+|. |.+|+|
T Consensus       230 ~~dva~a~~~l~~~~~~-~~~g~~~~~~~g  258 (262)
T PRK13394        230 VEDVAQTVLFLSSFPSA-ALTGQSFVVSHG  258 (262)
T ss_pred             HHHHHHHHHHHcCcccc-CCcCCEEeeCCc
Confidence            99999999999986544 34455 556876

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=258.70  Aligned_cols=237  Identities=22%  Similarity=0.296  Sum_probs=193.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||.++|++|+++|++|++++|+.++++...+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            67999999999999999999999999999999999988877777666543  3467889999999999999999999888


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHH-HHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPL-LEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~-m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|++|||||......  ..+.+.|++.+++|+.+++.+++++.|+ |.++ +.+++|++||..+..+..        .
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~sS~~~~~~~~--------~  158 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINVASVAGLGGNP--------P  158 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCC--------c
Confidence            99999999999754332  3577899999999999999999999998 6554 568999999977653210        1


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      ..++...|+++|+++++++++++.++.++||++++|+||+++|++.....+...+.     +..++.+|+|+|+.++||+
T Consensus       159 ~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  238 (259)
T PRK08213        159 EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLA  238 (259)
T ss_pred             cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            12345789999999999999999999999999999999999999765444332222     2345678999999999999


Q ss_pred             ccCCCCCCCcce-eeCCC
Q 019551          291 LQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       291 s~~~~~~~~G~~-~~d~~  307 (339)
                      ++... +.+|.. .+|++
T Consensus       239 ~~~~~-~~~G~~~~~~~~  255 (259)
T PRK08213        239 SDASK-HITGQILAVDGG  255 (259)
T ss_pred             Ccccc-CccCCEEEECCC
Confidence            86544 555555 56876

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.3e-34  Score=260.52  Aligned_cols=234  Identities=18%  Similarity=0.184  Sum_probs=179.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHH----HHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEI----KSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v----~~~~~~~~~  136 (339)
                      ++++||||++|||++++++|+++|++|++++| +++++++..+++....+ .++.++.+|++|.+++    +++++.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP-NSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC-CceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999875 45666666666654332 3577789999999865    455666667


Q ss_pred             CCCCccEEEEccccccCCCC--CCh-----------hhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITS-----------EGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS  198 (339)
                      .++++|+||||||...+...  .+.           +++++++++|+.+++.++++++|+|+..     ...++|++++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            88999999999998654332  122           2588999999999999999999999643     13468999999


Q ss_pred             ccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-ch-hHHH-HHh-c
Q 019551          199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MP-SFNE-RFA-G  274 (339)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~-~~~~-~~~-~  274 (339)
                      ..+.            .+.++..+|++||+|+++|+++++.|++++||+||+|+||+++|+..... .. .... .+. .
T Consensus       161 ~~~~------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~  228 (267)
T TIGR02685       161 AMTD------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQ  228 (267)
T ss_pred             hhcc------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCc
Confidence            7765            34567889999999999999999999999999999999999987632111 11 1111 112 3


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.+|+|+|+.++||++++....++..+.+|||.
T Consensus       229 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       229 REASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             CCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            5789999999999999865444444444668875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-35  Score=260.26  Aligned_cols=231  Identities=22%  Similarity=0.282  Sum_probs=189.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||+++||||++|||.+++++|+++|++|++++|+.+++++..+++.       ..++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-------GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-------CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            679999999999999999999999999999999999877665554431       2578899999999999999998888


Q ss_pred             CCccEEEEccccccCCC----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          139 KPVHVLVNNAGVLENNR----LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +++|++|||||...+..    ..+.+.+++.+++|+.+++.+++.++|+|+++ +.++||++||..+..+          
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~~~~~g----------  146 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASFVAVMG----------  146 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcchhhccC----------
Confidence            99999999999864321    24678899999999999999999999999876 5689999999765422          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHH-H----HHhccCCCHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFN-E----RFAGNLRTSEEGADTV  286 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~-~----~~~~~~~~~~e~A~~v  286 (339)
                       ..++...|+++|+++.++++.++.|+.++||+|++|+||+++|++......   ... +    .+.+++.+|+|+|+.+
T Consensus       147 -~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  225 (255)
T PRK06057        147 -SATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAV  225 (255)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             123567899999999999999999999999999999999999998654321   111 1    1234678999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++|+++.....++..+.+|+|.
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        226 AFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHhCccccCccCcEEEECCCe
Confidence            9999876665566666779873

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-35  Score=256.04  Aligned_cols=210  Identities=18%  Similarity=0.241  Sum_probs=170.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||++|||+++|+.|+++|++|++++|+.+++++..+++       .+.++.+|++|+++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999988776655443       245788999999999999887642   699


Q ss_pred             EEEEccccccC--C----CCC-ChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          143 VLVNNAGVLEN--N----RLI-TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       143 ~lInnAG~~~~--~----~~~-~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +||||||....  .    ... +.++|++++++|+.++++++|+++|.|++   +|+||++||...              
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~--------------  134 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPENP--------------  134 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCCC--------------
Confidence            99999985321  1    111 46789999999999999999999999963   489999998651              


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                        +....|++||+|+.+|+++++.|++++||+||+|+||+++|++.....       .....+|+|+|+.+.||+++...
T Consensus       135 --~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-------~~p~~~~~~ia~~~~~l~s~~~~  205 (223)
T PRK05884        135 --PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-------RTPPPVAAEIARLALFLTTPAAR  205 (223)
T ss_pred             --CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-------CCCCCCHHHHHHHHHHHcCchhh
Confidence              234689999999999999999999999999999999999998643211       11234899999999999986555


Q ss_pred             CCCCcceeeCCCC
Q 019551          296 KLVSGSFYFDRAE  308 (339)
Q Consensus       296 ~~~~G~~~~d~~~  308 (339)
                      ..++..+.+|||.
T Consensus       206 ~v~G~~i~vdgg~  218 (223)
T PRK05884        206 HITGQTLHVSHGA  218 (223)
T ss_pred             ccCCcEEEeCCCe
Confidence            4444445668874

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-35  Score=262.47  Aligned_cols=213  Identities=23%  Similarity=0.250  Sum_probs=184.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++|||||+|||+++|++|+++|++|++++|+++++++..+++.      ++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999888776655542      46788999999999999999999989


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||+......  .+.+++++++++|+.+++.+++.++|.|.++ +.++||++||.++..            +
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  143 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASLAGKI------------P  143 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCccccC------------C
Confidence            999999999998765443  5778899999999999999999999999877 568999999988763            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      .++...|++||+++.+|+++++.|+.+.||+|++|+||+++|++......    .......+|+|+|+.+++++..+.
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        144 VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG----AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc----ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            57788999999999999999999999999999999999999997654311    112246799999999999987544

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-34  Score=257.75  Aligned_cols=231  Identities=21%  Similarity=0.286  Sum_probs=189.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++||||++|||+++++.|+++|++|++++|+ .+++++..+++....+...+..+.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666666666665443333466788999999999999999999999999


Q ss_pred             EEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          143 VLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       143 ~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      ++|||||......  ..+.+++++++++|+.+++.+++.++|.|.+. +.++||++||..+..            +.++.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~------------~~~~~  148 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFK------------AEPDY  148 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhcc------------CCCCC
Confidence            9999999876543  25778899999999999999999999999876 568999999988763            35677


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCC--eEEEEeeCCcccCCCccCcch-----hHHHH-----HhccCCCHHHHHHHHHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKG--IGFYSMHPGWAETPGVAKSMP-----SFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~-----~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      ..|+++|+++++++++++.|+++++  |+|++|+||+++|++......     +....     +.+++.+|+|+|+.+++
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (251)
T PRK07069        149 TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLY  228 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            8999999999999999999998765  999999999999998653211     11111     12467899999999999


Q ss_pred             HhccCCCCCCCcceeeCCC
Q 019551          289 LALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~  307 (339)
                      |++++....++..+.+|+|
T Consensus       229 l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        229 LASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HcCccccCccCCEEEECCC
Confidence            9886555444445567877

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=256.50  Aligned_cols=231  Identities=23%  Similarity=0.285  Sum_probs=189.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||+++|+.|+++|++|+++.|+.+ ..++..+++...  +.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999998887644 445555555443  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++++++|+.+++.++++++|.|.+   .++||++||.+..            .
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~------------~  145 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIA------------L  145 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeecccc------------C
Confidence            999999999999865433  3577889999999999999999999999853   4799999997765            2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|+++|++++.++++++.|+.+.||++++|+||+++|++.... .+.....     +.+++.+|+|+|+.++|+
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  225 (245)
T PRK12937        146 PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFL  225 (245)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            4567789999999999999999999999999999999999999985322 2222221     235677999999999999


Q ss_pred             hccCCCCCCCccee-eCCC
Q 019551          290 ALQPKEKLVSGSFY-FDRA  307 (339)
Q Consensus       290 ~s~~~~~~~~G~~~-~d~~  307 (339)
                      ++++. .+++|.++ +||+
T Consensus       226 ~~~~~-~~~~g~~~~~~~g  243 (245)
T PRK12937        226 AGPDG-AWVNGQVLRVNGG  243 (245)
T ss_pred             cCccc-cCccccEEEeCCC
Confidence            97544 45556554 5876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.5e-34  Score=257.23  Aligned_cols=235  Identities=23%  Similarity=0.313  Sum_probs=195.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++.+|++|.++++++++.+.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998877777766544  3468899999999999999999999888


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||.......  .+.+++++.+++|+.+++.+++.+++.|++. +.++||++||.+++.            +
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~------------~  145 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARV------------G  145 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhcc------------C
Confidence            999999999998654332  5678899999999999999999999999776 568999999988763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hh-HHH-----HHhccCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PS-FNE-----RFAGNLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~-~~~-----~~~~~~~~~~e~A~~  285 (339)
                      .++...|+++|+|+++++++++.|+.+.||+++.++||+++|++.....     +. ...     .+.+++.+|+|+|+.
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (250)
T TIGR03206       146 SSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGA  225 (250)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHH
Confidence            4667789999999999999999999989999999999999999754321     11 111     123567899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++|++++.....+..+.+|+|.
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       226 ILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHcCcccCCCcCcEEEeCCCc
Confidence            99999875555555566678763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=262.43  Aligned_cols=219  Identities=22%  Similarity=0.287  Sum_probs=185.3

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.+++.++++++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888887777654  2367889999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC----CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~----~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.++++|++|||||+......    .+.++++..+++|+.|++.++++++|.|++. +.++||++||.++..        
T Consensus       113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~--------  183 (293)
T PRK05866        113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLS--------  183 (293)
T ss_pred             HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcC--------
Confidence            999999999999998765432    1357788999999999999999999999876 568999999976542        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                         .+.++...|++||+|+++|+++++.|++++||+|++|+||+++|++.......    ......+|+++|+.++..+.
T Consensus       184 ---~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----~~~~~~~pe~vA~~~~~~~~  256 (293)
T PRK05866        184 ---EASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----DGLPALTADEAAEWMVTAAR  256 (293)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----cCCCCCCHHHHHHHHHHHHh
Confidence               12456779999999999999999999999999999999999999987532110    01124689999999999886


Q ss_pred             c
Q 019551          292 Q  292 (339)
Q Consensus       292 ~  292 (339)
                      .
T Consensus       257 ~  257 (293)
T PRK05866        257 T  257 (293)
T ss_pred             c
Confidence            4

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=260.45  Aligned_cols=238  Identities=20%  Similarity=0.233  Sum_probs=197.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||.++++.|+++|++|++++|++++.+...+++....+..++.++.+|++|++++.++++++.+.+
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988877777776544333468889999999999999999999989


Q ss_pred             CCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|++|||||....   ....+.++++.++++|+.+++.+++++++.|.++ +.++|+++||..+..            
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~~~~~------------  151 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAASN------------  151 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhcC------------
Confidence            999999999997543   2235778899999999999999999999999766 468999999987762            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHHH-----HhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|++++.++++++.|+...||++++|+||+++|++......  .....     +..++.+|+|+|+.++|
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  231 (276)
T PRK05875        152 THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMF  231 (276)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999998654321  11111     23456789999999999


Q ss_pred             HhccCCCCCCCcceeeCCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |++.+.....+..+.+|+|..
T Consensus       232 l~~~~~~~~~g~~~~~~~g~~  252 (276)
T PRK05875        232 LLSDAASWITGQVINVDGGHM  252 (276)
T ss_pred             HcCchhcCcCCCEEEECCCee
Confidence            998765544555566788753

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=3.1e-34  Score=254.30  Aligned_cols=232  Identities=23%  Similarity=0.323  Sum_probs=192.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||++++++|+++|+.|++.+|+.+++++..+++     +.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988776655443     236788899999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.+++++.+.+.++ +.++||++||..+..            
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  144 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSVVGVT------------  144 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-CCCEEEEECCHHhCc------------
Confidence            999999999999876543  25778899999999999999999999988765 568999999987663            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|+++|+|+.++++.++.++.+.||++++|+||+++|++.....+...+.     +..++.+|+|+++.++|++
T Consensus       145 ~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  224 (245)
T PRK12936        145 GNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLA  224 (245)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            34567789999999999999999999999999999999999998765433322221     2346778999999999998


Q ss_pred             ccCCCCCCCcc-eeeCCCC
Q 019551          291 LQPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~-~~~d~~~  308 (339)
                      +++.. +.+|. +.+|+|.
T Consensus       225 ~~~~~-~~~G~~~~~~~g~  242 (245)
T PRK12936        225 SSEAA-YVTGQTIHVNGGM  242 (245)
T ss_pred             Ccccc-CcCCCEEEECCCc
Confidence            75444 45565 5568774

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=256.57  Aligned_cols=232  Identities=24%  Similarity=0.324  Sum_probs=194.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.   .+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            679999999999999999999999999999999999887777666654   23568899999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||.......  .+.+++++.+++|+.+++.+++.+++.|+++ +.++|+++||..+..            +
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~------------~  146 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALA------------G  146 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhcc------------C
Confidence            999999999998765433  5778999999999999999999999999876 568999999987663            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----hHHH------HHhccCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----SFNE------RFAGNLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~------~~~~~~~~~~e~A~~  285 (339)
                      .++...|+.+|++++.++++++.|++++||+|++++||++.|++......     ....      .+...+.+++|+|+.
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  226 (252)
T PRK06138        147 GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQA  226 (252)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            45678899999999999999999999999999999999999997654321     1111      112346789999999


Q ss_pred             HHHHhccCCCCCCCcce-eeCCC
Q 019551          286 VLWLALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~-~~d~~  307 (339)
                      +++++.++. ...+|.+ .+|+|
T Consensus       227 ~~~l~~~~~-~~~~g~~~~~~~g  248 (252)
T PRK06138        227 ALFLASDES-SFATGTTLVVDGG  248 (252)
T ss_pred             HHHHcCchh-cCccCCEEEECCC
Confidence            999997655 4556665 45876

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.1e-34  Score=286.04  Aligned_cols=222  Identities=23%  Similarity=0.288  Sum_probs=190.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+.++++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.+++.++++++.+.
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999998888887777654  236889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.+++++++++|+.|++.++++++|.|.+++.+|+||++||.+++.            
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  457 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA------------  457 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc------------
Confidence            999999999999976544  357899999999999999999999999998875568999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-h----hH--------HHHHhccCCCHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-P----SF--------NERFAGNLRTSEEG  282 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~----~~--------~~~~~~~~~~~~e~  282 (339)
                      +.++...|++||+|+++++++++.|++++||+|++|+||+|+|++..... +    +.        ...+..+..+||++
T Consensus       458 ~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v  537 (582)
T PRK05855        458 PSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKV  537 (582)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHH
Confidence            45678899999999999999999999999999999999999998765431 0    00        01112234689999


Q ss_pred             HHHHHHHhccC
Q 019551          283 ADTVLWLALQP  293 (339)
Q Consensus       283 A~~v~~l~s~~  293 (339)
                      |+.+++++..+
T Consensus       538 a~~~~~~~~~~  548 (582)
T PRK05855        538 AKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHcC
Confidence            99999999753

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-34  Score=252.68  Aligned_cols=232  Identities=22%  Similarity=0.238  Sum_probs=190.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||++++++|+++|++|++++|+++..+...+++...  ..++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999987777766666543  2357788999999999999999999888


Q ss_pred             CCccEEEEccccccCC-----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          139 KPVHVLVNNAGVLENN-----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       139 ~~id~lInnAG~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +++|+||||||+....     ...+.+++++.+++|+.+++.++++++|.|.+. +.++||++||.+++           
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~-----------  149 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSSTAAW-----------  149 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEEeccccc-----------
Confidence            9999999999986421     225778899999999999999999999999776 56899999998765           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-HHHH-----hccCCCHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-NERF-----AGNLRTSEEGADTVL  287 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~-----~~~~~~~~e~A~~v~  287 (339)
                          .+...|++||++++.++++++.++...||+++.++||+++|++.....+.. ....     ...+.+|+|+|+.++
T Consensus       150 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  225 (250)
T PRK07774        150 ----LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCL  225 (250)
T ss_pred             ----CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                234689999999999999999999999999999999999999865443321 1111     234668999999999


Q ss_pred             HHhccCCCCCCCc-ceeeCCCCC
Q 019551          288 WLALQPKEKLVSG-SFYFDRAEA  309 (339)
Q Consensus       288 ~l~s~~~~~~~~G-~~~~d~~~~  309 (339)
                      ++++... .+.+| .|.+|+|..
T Consensus       226 ~~~~~~~-~~~~g~~~~v~~g~~  247 (250)
T PRK07774        226 FLLSDEA-SWITGQIFNVDGGQI  247 (250)
T ss_pred             HHhChhh-hCcCCCEEEECCCee
Confidence            9987543 33444 456687753

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.4e-34  Score=258.60  Aligned_cols=212  Identities=26%  Similarity=0.256  Sum_probs=178.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+        ..+.++.+|++|.++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999876654321        2477889999999999999999999999


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+.....  ..+.++++..+++|+.+++.+++.++|.|+++ +.++||++||.++..            +.
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~------------~~  140 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKI------------YT  140 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcC------------CC
Confidence            9999999999876543  35788999999999999999999999999876 568999999987653            23


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------------hhHH----HH-----HhccC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------------PSFN----ER-----FAGNL  276 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------------~~~~----~~-----~~~~~  276 (339)
                      +....|++||+++++|+++++.|+++.||+|++|+||+++|++.....            .+..    +.     ..+++
T Consensus       141 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (273)
T PRK06182        141 PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRL  220 (273)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccC
Confidence            556689999999999999999999999999999999999999753110            0000    01     13467


Q ss_pred             CCHHHHHHHHHHHhcc
Q 019551          277 RTSEEGADTVLWLALQ  292 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~  292 (339)
                      .+|+++|+.++++++.
T Consensus       221 ~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        221 SDPSVIADAISKAVTA  236 (273)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            8999999999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-34  Score=255.72  Aligned_cols=235  Identities=24%  Similarity=0.315  Sum_probs=196.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||+++||+++|++|+++|++|++++|++++.++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998888877776553  3478899999999999999999999988


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +.+|+||||||.......  .+.++++..+++|+.+++.+++.+++.|+++ +.++||++||..+..            +
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~------------~  146 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASVHGLV------------G  146 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcchhhcc------------C
Confidence            999999999997665432  5778899999999999999999999999877 578999999987763            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------H-HHH-----HhccCCCH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------F-NER-----FAGNLRTS  279 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~-~~~-----~~~~~~~~  279 (339)
                      .++...|+++|++++.+++.++.|+.+.||+|++++||+++||+.....+.           . ...     ..+.+.++
T Consensus       147 ~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T PRK12429        147 SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTV  226 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCH
Confidence            567889999999999999999999999999999999999999876432111           0 011     12457789


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+.+++++.+......+..|.+|+|.
T Consensus       227 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        227 EEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            99999999998765444444455668763

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=255.34  Aligned_cols=219  Identities=24%  Similarity=0.343  Sum_probs=176.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++  +    +++.+.+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~--~----~~~~~~~   65 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD--L----EPLFDWV   65 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH--H----HHHHHhh
Confidence            6789999999999999999999999999999999986431      0     23578899999987  3    3344455


Q ss_pred             CCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|++|||||....   ....+.+++++.+++|+.+++.++++++|.|.++ +.++||++||..+..            
T Consensus        66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  132 (235)
T PRK06550         66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIASFV------------  132 (235)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhcc------------
Confidence            789999999997532   2336788999999999999999999999999776 568999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|+++++++++++.|+.++||+||+|+||+++|++.....+.  ..     ..+.+++.+|+|+|+.++|
T Consensus       133 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  212 (235)
T PRK06550        133 AGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLF  212 (235)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHH
Confidence            3456778999999999999999999999999999999999999976543221  11     1124567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCC
Q 019551          289 LALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~  307 (339)
                      |+++.....++..+.+|||
T Consensus       213 l~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        213 LASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             HcChhhccCCCcEEEECCc
Confidence            9986554444444456887

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=255.86  Aligned_cols=231  Identities=16%  Similarity=0.191  Sum_probs=180.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc----hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK----EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++++.    +..++..+++...  +.++.++.+|+++++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            36789999999999999999999999999977776543    3344444444433  34688899999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEE-cCccccccccCccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITV-SSGGMYTAHLTDDL  210 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~v-sS~~~~~~~~~~~~  210 (339)
                      +.+.++++|++|||||......  ..+.+++++.+++|+.+++.++++++|+|.+   .++++++ ||..+.        
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~--------  151 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGA--------  151 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcc--------
Confidence            9998999999999999865433  3577899999999999999999999999864   3567665 454332        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHH------H--HHh--ccCCCH
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFN------E--RFA--GNLRTS  279 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~------~--~~~--~~~~~~  279 (339)
                           +.++...|++||+|+++|+++++.|+.++||+||+|+||+++|++..... +...      .  .+.  .++.+|
T Consensus       152 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (257)
T PRK12744        152 -----FTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDI  226 (257)
T ss_pred             -----cCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCH
Confidence                 23556789999999999999999999999999999999999998753211 1100      0  011  267889


Q ss_pred             HHHHHHHHHHhccCCCCCC-CcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLV-SGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~-~G~~~~d~~~  308 (339)
                      +|+|+.++||+++ . .+. +..+.+|+|.
T Consensus       227 ~dva~~~~~l~~~-~-~~~~g~~~~~~gg~  254 (257)
T PRK12744        227 EDIVPFIRFLVTD-G-WWITGQTILINGGY  254 (257)
T ss_pred             HHHHHHHHHhhcc-c-ceeecceEeecCCc
Confidence            9999999999984 3 344 4455668873

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9.2e-34  Score=251.81  Aligned_cols=234  Identities=22%  Similarity=0.327  Sum_probs=191.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||.++|++|+++|++|+++.+ +++..++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999987654 455555555665433  246889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||.......  .+.+.+++.+++|+.+++.++++++|.|.+. +.+++|++||..+..            
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  148 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSIIGQA------------  148 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchhhcC------------
Confidence            9999999999998765432  5678999999999999999999999999766 568999999987663            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++++++++.|+.+.||+++.|+||+++|++...........     ..+.+..|+|+++.+++++
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~  228 (247)
T PRK12935        149 GGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLC  228 (247)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHc
Confidence            34567799999999999999999999999999999999999998765432221111     1245788999999999998


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +. .....+..+.+|++.
T Consensus       229 ~~-~~~~~g~~~~i~~g~  245 (247)
T PRK12935        229 RD-GAYITGQQLNINGGL  245 (247)
T ss_pred             Cc-ccCccCCEEEeCCCc
Confidence            64 333455666778873

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=253.12  Aligned_cols=228  Identities=24%  Similarity=0.300  Sum_probs=187.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC--HHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS--ITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~  135 (339)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+. ++..+.++.+|+++  .+++.++++++.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc-CCCCcceEEeeecccchHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998888877777543 23456788899986  568899999888


Q ss_pred             cCC-CCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          136 LKN-KPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       136 ~~~-~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.+ +++|++|||||....   ....+.+++++.+++|+.+++.++++++|.|.+. +.+++|++||..+..        
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~--------  152 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGESHGET--------  152 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEecccccc--------
Confidence            877 789999999997543   2336778999999999999999999999999766 568999999977652        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCC-CeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHh
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEK-GIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~  290 (339)
                          +.++...|++||++++.++++++.|+.++ +|+|++|+||+|+||+.....+...   ...+.+++|++..++|++
T Consensus       153 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  225 (239)
T PRK08703        153 ----PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA---KSERKSYGDVLPAFVWWA  225 (239)
T ss_pred             ----CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC---ccccCCHHHHHHHHHHHh
Confidence                35667789999999999999999999877 6999999999999998654433211   124579999999999999


Q ss_pred             ccCCCCCCCccee
Q 019551          291 LQPKEKLVSGSFY  303 (339)
Q Consensus       291 s~~~~~~~~G~~~  303 (339)
                      ++ ....++|..+
T Consensus       226 ~~-~~~~~~g~~~  237 (239)
T PRK08703        226 SA-ESKGRSGEIV  237 (239)
T ss_pred             Cc-cccCcCCeEe
Confidence            84 4445566543

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=251.57  Aligned_cols=232  Identities=25%  Similarity=0.300  Sum_probs=184.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +|++|||||++|||.++|++|+++|++|+++++ ++++.++..+++...  +.++.++.+|++|.+++.++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999988874 445555555555433  24678899999999999999999999999


Q ss_pred             CccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccC
Q 019551          140 PVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       140 ~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++|+||||||......   ..+.++|++.+++|+.+++.+++++++.|.++.  ++++||++||.++..+          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  149 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG----------  149 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC----------
Confidence            9999999999875432   257789999999999999999999999997542  3578999999876632          


Q ss_pred             CCCcc-hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHH-----HHhccCCCHHHHHHHHH
Q 019551          215 GSFDG-MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNE-----RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~-~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~-----~~~~~~~~~~e~A~~v~  287 (339)
                        .++ ...|+++|+++++|+++++.|+.++||+|++|+||++.|++.... .+....     .+.++..+|+|+++.++
T Consensus       150 --~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~  227 (248)
T PRK06123        150 --SPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAIL  227 (248)
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              233 357999999999999999999999999999999999999975432 122111     12345678999999999


Q ss_pred             HHhccCCCCCCCcc-eeeCCC
Q 019551          288 WLALQPKEKLVSGS-FYFDRA  307 (339)
Q Consensus       288 ~l~s~~~~~~~~G~-~~~d~~  307 (339)
                      ++++.... +.+|. +.+|++
T Consensus       228 ~l~~~~~~-~~~g~~~~~~gg  247 (248)
T PRK06123        228 WLLSDEAS-YTTGTFIDVSGG  247 (248)
T ss_pred             HHhCcccc-CccCCEEeecCC
Confidence            99985444 44454 455765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=251.70  Aligned_cols=233  Identities=24%  Similarity=0.310  Sum_probs=187.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+++||||++|||.++|+.|+++|++|+++. |+++++++..+++...  +.++.++.||+++.++++++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            37899999999999999999999999998765 6666666666666543  34688999999999999999999988889


Q ss_pred             CccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccC
Q 019551          140 PVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       140 ~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++|+||||||.....   ...+.++++..+++|+.+++.+++++++.|..+.  +.++||++||.++..+          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----------  149 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG----------  149 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC----------
Confidence            999999999986543   2357788999999999999999999999987542  2578999999876532          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                       ....+..|++||+++++++++++.++.++||+|+.|+||+++|++.... .+.....     +..+..+|+++|+.++|
T Consensus       150 -~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~  228 (248)
T PRK06947        150 -SPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVW  228 (248)
T ss_pred             -CCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence             1123457999999999999999999999999999999999999976431 2221111     22456799999999999


Q ss_pred             HhccCCCCCCCccee-eCCC
Q 019551          289 LALQPKEKLVSGSFY-FDRA  307 (339)
Q Consensus       289 l~s~~~~~~~~G~~~-~d~~  307 (339)
                      +++++. .+.+|.++ +|||
T Consensus       229 l~~~~~-~~~~G~~~~~~gg  247 (248)
T PRK06947        229 LLSDAA-SYVTGALLDVGGG  247 (248)
T ss_pred             HcCccc-cCcCCceEeeCCC
Confidence            988654 46677765 4775

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-34  Score=256.98  Aligned_cols=218  Identities=27%  Similarity=0.364  Sum_probs=183.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... ...+.++.+|++|+++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999888887777776542 2345667899999999999999999889999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||......  ..+.++++..+++|+.+++.++++++|.|.+...+++||++||..+..            +.++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~~~~  147 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV------------ALPW  147 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC------------CCCC
Confidence            99999999865433  368899999999999999999999999997654568999999987652            3566


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--------h---hHHHHHhccCCCHHHHHHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------P---SFNERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------~---~~~~~~~~~~~~~~e~A~~v~~  288 (339)
                      ...|++||+++.+|+++++.|+.++||+|++|+||+++|++.....        +   .......++..+|+|+|+.+++
T Consensus       148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~  227 (272)
T PRK07832        148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILA  227 (272)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHH
Confidence            7789999999999999999999999999999999999999765321        1   0111233456899999999999


Q ss_pred             Hhcc
Q 019551          289 LALQ  292 (339)
Q Consensus       289 l~s~  292 (339)
                      ++..
T Consensus       228 ~~~~  231 (272)
T PRK07832        228 GVEK  231 (272)
T ss_pred             HHhc
Confidence            9963

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=251.72  Aligned_cols=225  Identities=23%  Similarity=0.255  Sum_probs=189.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||||++|||++++++|+++|++|++++|++++.++..+++.+.  +.++.++.+|++|.+++.++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999999998877777766543  24688899999999999999999999999


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||......  ..+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..            +.
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~  149 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSIAARN------------AF  149 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCc------------CC
Confidence            9999999999866433  25778899999999999999999999999876 568999999987763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      ++...|+++|++++.++++++.|+++.||++++|+||+++|++....... ......++.+|+|+|+.++++++.+...+
T Consensus       150 ~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~~~~  228 (241)
T PRK07454        150 PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-ADFDRSAMLSPEQVAQTILHLAQLPPSAV  228 (241)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc-cccccccCCCHHHHHHHHHHHHcCCccce
Confidence            66788999999999999999999999999999999999999985432111 00112356799999999999998776555


Q ss_pred             CCc
Q 019551          298 VSG  300 (339)
Q Consensus       298 ~~G  300 (339)
                      +.+
T Consensus       229 ~~~  231 (241)
T PRK07454        229 IED  231 (241)
T ss_pred             eee
Confidence            444

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=250.78  Aligned_cols=232  Identities=22%  Similarity=0.273  Sum_probs=190.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |+++||||++|||+++|++|+++|++|++++|+.+. .++...+...  .+.++.++.+|+++.+++.++++.+.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998642 2222222211  2346889999999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||||......  ..+.+++++.+++|+.+++.+++.++|.|++. +.++||++||..+..            +.+
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~------------~~~  147 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLK------------GQF  147 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhcc------------CCC
Confidence            999999999875443  35789999999999999999999999999876 568999999987763            456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhccC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      +...|+++|+|+++++++++.|+++.||++++++||+++|++.....+.....     +.+.+.+++|+++.+.+|+++.
T Consensus       148 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  227 (245)
T PRK12824        148 GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEA  227 (245)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            77899999999999999999999999999999999999999765443322211     2345779999999999999765


Q ss_pred             CCCCCCcceeeCCCC
Q 019551          294 KEKLVSGSFYFDRAE  308 (339)
Q Consensus       294 ~~~~~~G~~~~d~~~  308 (339)
                      .....+..+.+|+|.
T Consensus       228 ~~~~~G~~~~~~~g~  242 (245)
T PRK12824        228 AGFITGETISINGGL  242 (245)
T ss_pred             ccCccCcEEEECCCe
Confidence            555555666778874

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-34  Score=255.15  Aligned_cols=214  Identities=14%  Similarity=0.092  Sum_probs=179.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++|+++||||++|||+++|++|+++| ++|++++|++++ +++..+++.... ..+++++.+|++|.++++++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            57899999999999999999999995 899999999886 787777776542 34789999999999999999998876 


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||+|...+...  .+.++..+.+++|+.+++.+++.++|.|.++ +.++||++||..+..            
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~------------  151 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGER------------  151 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcC------------
Confidence            4899999999998654321  2344556789999999999999999999877 568999999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      +.++...|++||+|+.+|+++++.|+.++||+|++|+||+++|++.....+.      ....+|+|+|+.++..+..+.
T Consensus       152 ~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        152 VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA------PLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC------CCCCCHHHHHHHHHHHHHcCC
Confidence            2345678999999999999999999999999999999999999977643211      124689999999999987543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-33  Score=251.15  Aligned_cols=231  Identities=25%  Similarity=0.330  Sum_probs=192.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++++++||||++|||+++++.|+++|++|++++|+++++++..+++.+.  +.++.++.+|+++.++++++++.+.+.+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999998888777777654  3468889999999999999999998888


Q ss_pred             CCccEEEEccccccCC-----------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          139 KPVHVLVNNAGVLENN-----------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       139 ~~id~lInnAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      +++|++|||||.....           ...+.+.++.++++|+.+++.+++.++|.|.+....++|+++||.+.+     
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-----  155 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-----  155 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-----
Confidence            8999999999975432           224668899999999999999999999999776456889999987543     


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEG  282 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~  282 (339)
                              +.++...|++||+|+++++++|+.|+.++||++++++||+++|++.....+...+.     +.+.+.+|+|+
T Consensus       156 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (253)
T PRK08217        156 --------GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEI  227 (253)
T ss_pred             --------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHH
Confidence                    34567899999999999999999999999999999999999999876544433222     23456799999


Q ss_pred             HHHHHHHhccCCCCCCCc-ceeeCCC
Q 019551          283 ADTVLWLALQPKEKLVSG-SFYFDRA  307 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G-~~~~d~~  307 (339)
                      |+.+.+++.+  . ..+| .+.+||+
T Consensus       228 a~~~~~l~~~--~-~~~g~~~~~~gg  250 (253)
T PRK08217        228 AHTVRFIIEN--D-YVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHHHHcC--C-CcCCcEEEeCCC
Confidence            9999999953  2 3455 4456775

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-34  Score=254.37  Aligned_cols=237  Identities=22%  Similarity=0.332  Sum_probs=195.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||++++++|+++|++ |++++|+.++.+...+++.+.  +.++.++.+|+++++++.++++.+.+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999998 999999988777666666433  346888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.++++.++++|+.+++.++++++|.|.++...+++|++||..++.            
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~------------  149 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG------------  149 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc------------
Confidence            899999999999875443  257789999999999999999999999998764468999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------chhHHH-----HHhccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------MPSFNE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------~~~~~~-----~~~~~~~~~~e~A  283 (339)
                      +.++...|+.+|+++++++++++.|+...||+|++|+||+++|++....       .+....     .+.+++.+++|+|
T Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  229 (260)
T PRK06198        150 GQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVA  229 (260)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHH
Confidence            3456789999999999999999999999999999999999999864211       011111     1234577999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +.+++++++.....++..+.+|++..
T Consensus       230 ~~~~~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        230 RAVAFLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             HHHHHHcChhhCCccCceEeECCccc
Confidence            99999998654444444456688754

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=8.5e-34  Score=236.78  Aligned_cols=228  Identities=26%  Similarity=0.358  Sum_probs=181.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHC-CCEE-EEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-
Q 019551           61 GKNCVVTGANAGIGYATAEGLASR-GATV-YMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-  137 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~-G~~V-vl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  137 (339)
                      -|.++||||.+|||..++++|.+. |-.+ +.++|+++++.+..+.....  +.+++++++|+++.+++.++++++.+. 
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            467999999999999999999975 6654 55667788753222222212  468999999999999999999999886 


Q ss_pred             -CCCccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC----------CCEEEEEcCccccc
Q 019551          138 -NKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAP----------DARVITVSSGGMYT  203 (339)
Q Consensus       138 -~~~id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~----------~~~Iv~vsS~~~~~  203 (339)
                       ...+|+||||||+...-..   .+.+.|.+.+++|..|+++++|+++|++++...          .+.|||+||.++..
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence             5689999999999875432   466789999999999999999999999987532          24799999987663


Q ss_pred             cccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHH
Q 019551          204 AHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGA  283 (339)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A  283 (339)
                      ..         ....++.+|.+||+|+++|+|+++.|+++.+|-|..+|||||.|+|.....          ..++||-+
T Consensus       161 ~~---------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a----------~ltveeSt  221 (249)
T KOG1611|consen  161 GG---------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA----------ALTVEEST  221 (249)
T ss_pred             CC---------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc----------ccchhhhH
Confidence            31         234567899999999999999999999999999999999999999977432          36888888


Q ss_pred             HHHHHHhccCCCCCCCcceee-CCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYF-DRAEAP  310 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~-d~~~~~  310 (339)
                      ..++..... -...-+|.||. |+.+.+
T Consensus       222 s~l~~~i~k-L~~~hnG~ffn~dlt~ip  248 (249)
T KOG1611|consen  222 SKLLASINK-LKNEHNGGFFNRDGTPIP  248 (249)
T ss_pred             HHHHHHHHh-cCcccCcceEccCCCcCC
Confidence            888887753 33345677776 776543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.5e-33  Score=248.03  Aligned_cols=232  Identities=23%  Similarity=0.291  Sum_probs=191.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |++|||||++|||+++|++|+++|++|++++| +++..++..+++...  +.++.++.+|++|+++++++++.+.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999988 555555555544333  346889999999999999999999988899


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||......  ..+.+++++.+++|+.+++.++++++|.|++. +.++||++||..+..            +.+
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~------------~~~  145 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQK------------GQF  145 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcC------------CCC
Confidence            999999999875433  35778899999999999999999999999876 568999999987652            346


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhccC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      +...|+++|++++.++++++.|+.+.||++++++||+++|++.....+.....     +..++.+|+|+++.+.||++++
T Consensus       146 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       146 GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            67899999999999999999999999999999999999999865433332222     2356789999999999999865


Q ss_pred             CCCCCCcceeeCCCC
Q 019551          294 KEKLVSGSFYFDRAE  308 (339)
Q Consensus       294 ~~~~~~G~~~~d~~~  308 (339)
                      .....+..+.+|||.
T Consensus       226 ~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       226 AGYITGATLSINGGL  240 (242)
T ss_pred             hcCccCCEEEecCCc
Confidence            554444445568874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.9e-34  Score=236.77  Aligned_cols=182  Identities=26%  Similarity=0.414  Sum_probs=165.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++|.++|||||++|||+++|++|.+.|-+||+++|+++++++++++.      +.++...||+.|.++.+++++++++.|
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHhhC
Confidence            68999999999999999999999999999999999999988887663      467788899999999999999999999


Q ss_pred             CCccEEEEccccccCCCCC----ChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          139 KPVHVLVNNAGVLENNRLI----TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~----~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +.+++||||||+.....+.    ..++.++-+.+|+.+|+.+++.++|++.++ +.+.||+|||+.+..           
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-~~a~IInVSSGLafv-----------  144 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-PEATIINVSSGLAFV-----------  144 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-CCceEEEeccccccC-----------
Confidence            9999999999998876553    345567889999999999999999999988 689999999998884           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                       +....+.||++|||++.++.+|+..++..+|.|.-+.|..|+|+
T Consensus       145 -Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         145 -PMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -cccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence             35556789999999999999999999999999999999999996

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-34  Score=257.52  Aligned_cols=213  Identities=20%  Similarity=0.242  Sum_probs=177.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC-
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN-  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  138 (339)
                      .+|+++||||++|||+++|++|+++|++|++++|+++++++..+        ..+.++.+|++|.++++++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999999877654321        146788999999999999999986654 


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+......  .+.++++..+++|+.|++.+++.++|.|.++ +.++||++||..+..            +
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~------------~  141 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLV------------P  141 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcC------------C
Confidence            789999999998765443  5778999999999999999999999999876 568999999987763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----------------------HH--H
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----------------------ER--F  272 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----------------------~~--~  272 (339)
                      .++...|++||+|+++|+++++.|++++||+|++|+||+++|++.....+...                      ..  .
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (277)
T PRK05993        142 MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSK  221 (277)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhc
Confidence            56678999999999999999999999999999999999999998653211100                      00  0


Q ss_pred             hccCCCHHHHHHHHHHHhccC
Q 019551          273 AGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      .....+||++|+.++..+..+
T Consensus       222 ~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        222 SRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             cccCCCHHHHHHHHHHHHcCC
Confidence            112468999999999998644

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=252.71  Aligned_cols=227  Identities=19%  Similarity=0.214  Sum_probs=187.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++..+++     ...+.++.+|++|+++++++++.+.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999988766554432     23578889999999999999999988889


Q ss_pred             CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|++|||||.......  .+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||.++..            +.
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~------------~~  143 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIGGIS------------AF  143 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcC------------CC
Confidence            99999999998765443  5778999999999999999999999999876 568999999988763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---------hhHHH-----HHhccC-CCHHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---------PSFNE-----RFAGNL-RTSEEG  282 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---------~~~~~-----~~~~~~-~~~~e~  282 (339)
                      ++...|+++|+++++++++++.|+++.||+|+.|+||+++|++.....         +....     ...+.+ .+|+|+
T Consensus       144 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dv  223 (275)
T PRK08263        144 PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAA  223 (275)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHH
Confidence            667889999999999999999999999999999999999999874211         11111     123456 899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      |+.+++++..+.   ..+.+++..+
T Consensus       224 a~~~~~l~~~~~---~~~~~~~~~~  245 (275)
T PRK08263        224 AEALLKLVDAEN---PPLRLFLGSG  245 (275)
T ss_pred             HHHHHHHHcCCC---CCeEEEeCch
Confidence            999999987432   2455665443

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.8e-33  Score=281.82  Aligned_cols=239  Identities=19%  Similarity=0.219  Sum_probs=197.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+...+..+.+|++|.++++++++++...
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999888877777765544446788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|+..+++|+.+++.+++.+++.|++++.+++||++||..+..            
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~------------  558 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY------------  558 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC------------
Confidence            999999999999865433  357889999999999999999999999998764568999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC--CccCcc-----------h-hHHH-----HHhccC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP--GVAKSM-----------P-SFNE-----RFAGNL  276 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~--~~~~~~-----------~-~~~~-----~~~~~~  276 (339)
                      +.++..+|++||+++++++++++.|+++.||+||+|+||.|.|+  +.....           . ...+     .+.++.
T Consensus       559 ~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~  638 (676)
T TIGR02632       559 AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRH  638 (676)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCC
Confidence            35677899999999999999999999999999999999999753  221110           0 1111     123567


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+|+|+|+.++||+++.....++..+.+|||.
T Consensus       639 v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       639 IFPADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence            89999999999999865544444445579885

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=252.07  Aligned_cols=211  Identities=18%  Similarity=0.226  Sum_probs=180.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  . ++.++.+|++|.+++.++++++.+.++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999988877666655322  2 6889999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          141 VHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       141 id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      +|+||||||.......   .+.++++.++++|+.|++.+++.++|.|+++ +.++||++||.++..            +.
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~------------~~  145 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVR------------GL  145 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcC------------CC
Confidence            9999999998653321   4678899999999999999999999999776 568999999988763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ++...|++||++++.++++++.|++++||+|++|+||+++|++......     ....+.+|+++|+.++..+..
T Consensus       146 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        146 PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPY-----PMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCC-----CCCCccCHHHHHHHHHHHHhC
Confidence            6778899999999999999999999999999999999999997543210     011246899999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-33  Score=252.56  Aligned_cols=216  Identities=20%  Similarity=0.283  Sum_probs=180.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+|+++||||+||||++++++|+++|++|++++|++++++...+.    . +.++..+.+|++|.+++.++++.+.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999998776544332    2 23678889999999999999999998899


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||......  ..+.+++++.+++|+.|++.++++++|+|+++ +.++||++||.++..            +.
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~~~~~------------~~  144 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMGGLI------------TM  144 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecccccC------------CC
Confidence            9999999999865433  35778899999999999999999999999876 568999999988763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------hhHHH-----------HHhccCCCH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------PSFNE-----------RFAGNLRTS  279 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------~~~~~-----------~~~~~~~~~  279 (339)
                      ++...|+++|+++++++++++.|+++.||+|++|+||+++|++.....       ++...           ....++.+|
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (277)
T PRK06180        145 PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDP  224 (277)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCH
Confidence            678899999999999999999999999999999999999998643211       11111           012346799


Q ss_pred             HHHHHHHHHHhccC
Q 019551          280 EEGADTVLWLALQP  293 (339)
Q Consensus       280 ~e~A~~v~~l~s~~  293 (339)
                      +|+|+.+++++..+
T Consensus       225 ~dva~~~~~~l~~~  238 (277)
T PRK06180        225 AKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999998754

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=252.28  Aligned_cols=216  Identities=22%  Similarity=0.322  Sum_probs=185.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||+||||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|++++.++++.+.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999998888888777654  3468889999999999999999999888999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||......  ..+.+++++.+++|+.+++.+++.++|.|.+. +.++||++||..+..            +.++
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~------------~~~~  145 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLM------------QGPA  145 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcC------------CCCC
Confidence            99999999876543  35778999999999999999999999999876 568999999988763            4567


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHH----HHhccCCCHHHHHHHHHHHhcc
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNE----RFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~----~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ...|+++|+++++++++++.|+.+.||+|++|+||+++|++.....   +....    .......+++++|+.++..+..
T Consensus       146 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        146 MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            8899999999999999999999999999999999999999865432   11111    1224457999999999999864

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=251.54  Aligned_cols=218  Identities=25%  Similarity=0.320  Sum_probs=184.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++...++ + . +.++.++.+|++|.++++++++.+.+ +
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            67899999999999999999999999999999999988887777666 2 2 34788999999999999999998876 7


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||......  ..+.+++++.+++|+.|++.+++.++|+|.++ +.++||++||..+..            +
T Consensus        79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------~  145 (263)
T PRK09072         79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGSTFGSI------------G  145 (263)
T ss_pred             CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecChhhCc------------C
Confidence            89999999999865433  35778899999999999999999999999776 468999999987653            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      .++...|+++|+++.+++++++.|+++.||+|++|+||+++|++..............++.+|+|+|+.+++++...
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        146 YPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCC
Confidence            56678899999999999999999999999999999999999987543322222222235679999999999999743

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-33  Score=247.78  Aligned_cols=233  Identities=21%  Similarity=0.244  Sum_probs=188.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+++||||++|||.++|+.|+++|++|++++|+.+ ..++..+++...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999998753 444444554432  24688999999999999999999999999


Q ss_pred             CccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-----CCEEEEEcCccccccccCccc
Q 019551          140 PVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-----DARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       140 ~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-----~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++|++|||||.....    ...+.+++++.+++|+.+++.+++++.+.|.++..     .++||++||..+..       
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  152 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-------  152 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc-------
Confidence            999999999986432    22577899999999999999999999999987633     46799999988763       


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH------HHhccCCCHHHHHH
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE------RFAGNLRTSEEGAD  284 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~e~A~  284 (339)
                           +.++...|+.||+++++++++++.|+.++||+|++|+||+++|++.....+....      .+..++.+|+|+++
T Consensus       153 -----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  227 (256)
T PRK12745        153 -----VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVAR  227 (256)
T ss_pred             -----CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHH
Confidence                 3456678999999999999999999999999999999999999876543222211      12345778999999


Q ss_pred             HHHHHhccCCCCCCCcce-eeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      .+.++++... .+.+|.+ .+|+|.
T Consensus       228 ~i~~l~~~~~-~~~~G~~~~i~gg~  251 (256)
T PRK12745        228 AVAALASGDL-PYSTGQAIHVDGGL  251 (256)
T ss_pred             HHHHHhCCcc-cccCCCEEEECCCe
Confidence            9999987543 3445544 568873

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-33  Score=247.22  Aligned_cols=230  Identities=22%  Similarity=0.299  Sum_probs=185.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ..+|+++||||++|||++++++|+++|++|++++++ .+.+++..+++...  +.++.++.+|++|.+++.++++++...
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999887764 45566666666543  346888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||......  ..+.+++++.+++|+.+++.+++++.+.|.+. ..++||+++|....            .
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s~~~~------------~  151 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMIDQRVW------------N  151 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECchhhc------------C
Confidence            899999999999865443  35778999999999999999999999999765 56899999887654            2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH----HhccCCCHHHHHHHHHHHhc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      +.+++..|++||+++++++++++.|+.+. |+|++|+||++.|+..... ......    +.++..+|+|+|+.++++++
T Consensus       152 ~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        152 LNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSP-EDFARQHAATPLGRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence            34566789999999999999999999765 9999999999998653211 111111    23456789999999999997


Q ss_pred             cCCCCCCCc-ceeeCCCC
Q 019551          292 QPKEKLVSG-SFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G-~~~~d~~~  308 (339)
                      .+   ..+| .+++|+|.
T Consensus       230 ~~---~~~g~~~~i~gg~  244 (258)
T PRK09134        230 AP---SVTGQMIAVDGGQ  244 (258)
T ss_pred             CC---CcCCCEEEECCCe
Confidence            42   3445 45668875

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-33  Score=251.20  Aligned_cols=222  Identities=23%  Similarity=0.308  Sum_probs=185.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||+||||+++|+.|+++|++|++++|+++++++..+++.....+.++.++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            5789999999999999999999999999999999988887776666544333578899999999999999 888888889


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|++|||||......  ..+.+++++.+++|+.+++.+++.++|.|++. +.++||++||..+..            +.
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~------------~~  147 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSISGRV------------GF  147 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcccccC------------CC
Confidence            9999999999876543  25778999999999999999999999999776 568999999987653            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-------------hHHH-------HHhccCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-------------SFNE-------RFAGNLR  277 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-------------~~~~-------~~~~~~~  277 (339)
                      ++...|+++|+++++|+++++.|+.++||+|++++||+++|++.....+             ....       ....++.
T Consensus       148 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (280)
T PRK06914        148 PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFG  227 (280)
T ss_pred             CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccC
Confidence            6778999999999999999999999999999999999999997542110             0000       1134578


Q ss_pred             CHHHHHHHHHHHhccCCC
Q 019551          278 TSEEGADTVLWLALQPKE  295 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~  295 (339)
                      +|+|+|++++++++++..
T Consensus       228 ~~~dva~~~~~~~~~~~~  245 (280)
T PRK06914        228 NPIDVANLIVEIAESKRP  245 (280)
T ss_pred             CHHHHHHHHHHHHcCCCC
Confidence            999999999999986443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-32  Score=243.72  Aligned_cols=234  Identities=26%  Similarity=0.302  Sum_probs=195.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|+++||||++|||+++|+.|+++|++|+++ +|++++.++..+++...  +.++.++.+|++|++++.++++.+.+.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999 99988877777766543  346889999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||+|......  ..+.+++++.+++|+.+++.+++.++|.+.++ +.+++|++||..+..            
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~------------  147 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-KSGVIVNISSIWGLI------------  147 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCHhhcc------------
Confidence            889999999999874332  35788999999999999999999999999776 568999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.+....|+.+|++++.++++++.++.++||++++|+||+++|++.....+.....     +..+..+|+++|+.+++++
T Consensus       148 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (247)
T PRK05565        148 GASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLA  227 (247)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            34566789999999999999999999999999999999999998766544322221     1245678999999999999


Q ss_pred             ccCCCCCCCcce-eeCCCC
Q 019551          291 LQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~-~~d~~~  308 (339)
                      +.... ..+|++ .+|++.
T Consensus       228 ~~~~~-~~~g~~~~~~~~~  245 (247)
T PRK05565        228 SDDAS-YITGQIITVDGGW  245 (247)
T ss_pred             CCccC-CccCcEEEecCCc
Confidence            86554 445555 568763

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-33  Score=246.84  Aligned_cols=230  Identities=22%  Similarity=0.270  Sum_probs=189.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||++++++|+++|++|++++|+.++++...+++.    +.++.++.+|++|.+++..+++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999999888777666552    346888999999999999999999888899


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||+|......  ..+.+++++.+++|+.+++.+++++++.+.++ +.++||++||..+..             ..
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~-------------~~  143 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSVNGMA-------------AL  143 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhcC-------------CC
Confidence            999999999875443  25778899999999999999999999999766 568999999976542             12


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +...|+.+|+++++++++++.|++++||+|++++||+++|++.....   +.....     +...+..++|+++++++|+
T Consensus       144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  223 (257)
T PRK07074        144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLA  223 (257)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            45589999999999999999999999999999999999999754321   111111     2356789999999999999


Q ss_pred             ccCCCCCCCcce-eeCCCCC
Q 019551          291 LQPKEKLVSGSF-YFDRAEA  309 (339)
Q Consensus       291 s~~~~~~~~G~~-~~d~~~~  309 (339)
                      ++... ..+|.+ .+|+|..
T Consensus       224 ~~~~~-~~~g~~~~~~~g~~  242 (257)
T PRK07074        224 SPAAR-AITGVCLPVDGGLT  242 (257)
T ss_pred             Cchhc-CcCCcEEEeCCCcC
Confidence            75444 455555 5688854

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7e-33  Score=246.30  Aligned_cols=228  Identities=24%  Similarity=0.288  Sum_probs=190.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC--CHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS--SITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  136 (339)
                      +++|+++||||++|||.+++++|++.|++|++++|+.+++++..+++.+.. ..++.++.+|++  ++++++++++.+.+
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999988887777776543 345677777886  78999999999999


Q ss_pred             CCCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .++++|+||||||.....   ...+.+.+++.+++|+.+++.++++++|+|.++ +.++||++||..+..          
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~----------  157 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTSSSVGRQ----------  157 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEccHhhcC----------
Confidence            899999999999986542   235678899999999999999999999999876 578999999987663          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                        +.++...|++||++++.++++++.++...||++++++||+++|++.....+..   ....+.+|+|+++.++|+++++
T Consensus       158 --~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        158 --GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE---DPQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             --CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc---cccCCCCHHHHHHHHHHHhCcc
Confidence              34567789999999999999999999999999999999999998754333221   1245789999999999998754


Q ss_pred             CCCCCCcceee
Q 019551          294 KEKLVSGSFYF  304 (339)
Q Consensus       294 ~~~~~~G~~~~  304 (339)
                      .. ..+|+++.
T Consensus       233 ~~-~~~g~~~~  242 (247)
T PRK08945        233 SR-RKNGQSFD  242 (247)
T ss_pred             cc-ccCCeEEe
Confidence            44 56776643

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-33  Score=246.84  Aligned_cols=233  Identities=28%  Similarity=0.403  Sum_probs=188.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++||||++|||.++|++|+++|++|++. .|+.+++++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999775 78877776666666432  24688899999999999999999887


Q ss_pred             CC------CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          137 KN------KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       137 ~~------~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      .+      +++|++|||||.......  .+.+.++.++++|+.+++.+++.+++.|.+   .+++|++||..+..     
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~-----  152 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRL-----  152 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcC-----
Confidence            65      479999999998655432  577889999999999999999999999854   37899999987763     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEE  281 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e  281 (339)
                             +.++...|++||+|++.++++++.|+.+.||+|++++||+++|++.....+  ....     ...+++.+++|
T Consensus       153 -------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (254)
T PRK12746        153 -------GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVED  225 (254)
T ss_pred             -------CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHH
Confidence                   356778899999999999999999999999999999999999998654321  1111     11356678999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|+.+.++++++.....+..|.++++
T Consensus       226 va~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        226 IADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            99999999875543334445556765

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=244.23  Aligned_cols=213  Identities=16%  Similarity=0.210  Sum_probs=184.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||++++++|+++|++|++++|+++++++..+++.+..++.++.++.+|+++.+++.++++++...+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999988888777776655668999999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||||+......  .+.+.+++.+++|+.+++.+++.++|.|++. +.++||++||..+..+            .+
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~------------~~  148 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSVSAVRG------------LP  148 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEeccccccC------------CC
Confidence            9999999998765432  4667888999999999999999999999876 5689999999876532            33


Q ss_pred             -chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          219 -GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       219 -~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                       ....|+.||+++++++++++.|+...||+|++|+||+++|++......      .....+++++|+.++..+..
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        149 GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS------TPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc------CCccCCHHHHHHHHHHHHhc
Confidence             357899999999999999999999899999999999999997654321      12357899999999998863

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.3e-33  Score=244.24  Aligned_cols=220  Identities=21%  Similarity=0.298  Sum_probs=186.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988887777777533  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+++++.+++|+.+++.+++++.|.|.++ +.+++|++||..+..            
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~------------  148 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-QSGDIINISSTAGQK------------  148 (239)
T ss_pred             cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEEcchhhcc------------
Confidence            999999999999865433  35778899999999999999999999999776 568999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      +.++...|+.+|+++..++++++.|+.+.||++++|+||++.|++.......  ......+.+++|+|+.++.+++.+.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        149 GAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--DGNPDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--ccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            3566778999999999999999999999999999999999999975432111  1112356789999999999997543

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=243.47  Aligned_cols=228  Identities=24%  Similarity=0.267  Sum_probs=184.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++++.|+++|++|++++|+++++++..++.       ...++.+|+++.+++.++++.    
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----
Confidence            477899999999999999999999999999999999987765444332       245778999999998887775    


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .+++|++|||||.......  .+.+++++.+++|+.+++.+++++++.+.+++..++||++||..+..            
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------  142 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV------------  142 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC------------
Confidence            4689999999998654432  57788999999999999999999999997653458999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|+++|++++.++++++.++.+.||++++++||++.|++.......  ...     .+.+++.+++|+|+.+++
T Consensus       143 ~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  222 (245)
T PRK07060        143 GLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILF  222 (245)
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            3456778999999999999999999999999999999999999975432211  111     123567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++++.....+..+.+|+|-
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        223 LLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HcCcccCCccCcEEeECCCc
Confidence            99866555445555668873

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=4.7e-33  Score=243.99  Aligned_cols=218  Identities=24%  Similarity=0.248  Sum_probs=183.1

Q ss_pred             CCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           51 KPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        51 ~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +|.+....+ |++++|||||.|||++.|++||++|.+|++++|++++++.+.+||.+.++ ..+.++.+|+++.+.+.+-
T Consensus        40 ~~~~~~~~~-g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~  117 (312)
T KOG1014|consen   40 RPKDLKEKL-GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEK  117 (312)
T ss_pred             eecchHHhc-CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHH
Confidence            344443334 59999999999999999999999999999999999999999999999987 7899999999988874333


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCC----CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~----~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      +.+.... ..+.+||||+|+..+.+.    .+.+.+++++++|..+...+++.++|.|.++ +.|.||++||.++.    
T Consensus       118 i~~~l~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS~ag~----  191 (312)
T KOG1014|consen  118 LLEKLAG-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGSFAGL----  191 (312)
T ss_pred             HHHHhcC-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEecccccc----
Confidence            3332222 368899999999885432    4556889999999999999999999999987 78999999999988    


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHH
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v  286 (339)
                              .+.|.++.|++||+.+..|+++|+.|++.+||.|.++.|..|.|+|.....+.      -...+|+..|...
T Consensus       192 --------~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~s------l~~ps~~tfaksa  257 (312)
T KOG1014|consen  192 --------IPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPS------LFVPSPETFAKSA  257 (312)
T ss_pred             --------ccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCC------CcCcCHHHHHHHH
Confidence                    46899999999999999999999999999999999999999999987654321      2245777777776


Q ss_pred             HHHh
Q 019551          287 LWLA  290 (339)
Q Consensus       287 ~~l~  290 (339)
                      +.-.
T Consensus       258 l~ti  261 (312)
T KOG1014|consen  258 LNTI  261 (312)
T ss_pred             Hhhc
Confidence            6554

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-32  Score=250.11  Aligned_cols=220  Identities=23%  Similarity=0.239  Sum_probs=183.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988888777776543  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCC-----CEEEEEcCccccccccCccc
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~-----~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++++|+||||||......  ..+.++++..+++|+.|++.++++++|.|.++...     ++||++||.++..       
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  153 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-------  153 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence            999999999999976543  35778999999999999999999999999876432     7999999988773       


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcC--CCeEEEEeeCCcccCCCccCcch--h-------------HH----
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMP--S-------------FN----  269 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~--~-------------~~----  269 (339)
                           +.++...|++||+++++|+++++.|+..  .+|+++.++||+++|++......  .             ..    
T Consensus       154 -----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (287)
T PRK06194        154 -----APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMS  228 (287)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHH
Confidence                 3456778999999999999999999874  57999999999999987643210  0             00    


Q ss_pred             HH-HhccCCCHHHHHHHHHHHhc
Q 019551          270 ER-FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       270 ~~-~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .. ......+++|+|+.++.++.
T Consensus       229 ~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        229 QKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             HhhhhccCCCHHHHHHHHHHHHH
Confidence            00 01123689999999999874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.7e-32  Score=244.00  Aligned_cols=218  Identities=18%  Similarity=0.272  Sum_probs=179.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++||||++|||.++|+.|+++|++|++++|+++++++..+++     +.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999988766655443     2368889999999999999999998888999


Q ss_pred             cEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          142 HVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       142 d~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      |++|||||....   ....+.+++++++++|+.+++.++++++|.|.++ +.++||++||..+.            .+.+
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~------------~~~~  142 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGS------------WPYA  142 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCcccC------------CCCC
Confidence            999999997532   2235788999999999999999999999999876 56899999998765            2456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC-cc---hhH-HHHH-hccCCCHHHHHHHHHHHhcc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK-SM---PSF-NERF-AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~-~~---~~~-~~~~-~~~~~~~~e~A~~v~~l~s~  292 (339)
                      +...|+++|++++++++.++.|+.++||+|++|+||++.|+.... ..   +.. ...+ ...+.+|+|+|+.++++++.
T Consensus       143 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~  222 (248)
T PRK10538        143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATL  222 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcC
Confidence            677999999999999999999999999999999999998544322 11   111 1111 22457899999999999986


Q ss_pred             CCCCC
Q 019551          293 PKEKL  297 (339)
Q Consensus       293 ~~~~~  297 (339)
                      +....
T Consensus       223 ~~~~~  227 (248)
T PRK10538        223 PAHVN  227 (248)
T ss_pred             CCccc
Confidence            65433

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=242.40  Aligned_cols=220  Identities=24%  Similarity=0.332  Sum_probs=179.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+|+++||||++|||++++++|+++|++|++++|+.++          ..   ...++.+|++|.++++++++++.+.+ 
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            47899999999999999999999999999999998753          01   12467899999999999999988776 


Q ss_pred             CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|++|||||.......  .+.+++++.+++|+.+++.++++++|.|+++ +.++||++||...+             +.
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~-------------~~  133 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSRAIF-------------GA  133 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcccccc-------------CC
Confidence            58999999998765443  5788999999999999999999999999876 56899999998643             23


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHH-----HHhccCCCHHHHHHHHHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNE-----RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~-----~~~~~~~~~~e~A~~v~~l  289 (339)
                      ++...|++||+++++++++++.|+++.||+|++|+||+++|++.....+   ....     .+.++..+|+|+|..++++
T Consensus       134 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  213 (234)
T PRK07577        134 LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFL  213 (234)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998653321   1111     1223456899999999999


Q ss_pred             hccCCCCCCCcce-eeCCCC
Q 019551          290 ALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~-~~d~~~  308 (339)
                      ++++.. ..+|.+ .+||+.
T Consensus       214 ~~~~~~-~~~g~~~~~~g~~  232 (234)
T PRK07577        214 LSDDAG-FITGQVLGVDGGG  232 (234)
T ss_pred             hCcccC-CccceEEEecCCc
Confidence            976544 445555 458764

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=248.27  Aligned_cols=211  Identities=27%  Similarity=0.319  Sum_probs=178.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||||+||||+++|++|+++|++|++++|++++.+.          ..+++++.+|++|+++++++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998765321          13578899999999999999999999999


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||......  ..+.+++++++++|+.|++.+++.++|.|+++ +.++||++||..+..            +.
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~  139 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSVLGFL------------PA  139 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCccccC------------CC
Confidence            9999999999876443  35778999999999999999999999999876 578999999987763            35


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHH----------HHHhccCCCHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFN----------ERFAGNLRTSEE  281 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~----------~~~~~~~~~~~e  281 (339)
                      +....|++||+++++++++++.|++++||+|++|+||+++|++......      ...          ..+..+..+|++
T Consensus       140 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (270)
T PRK06179        140 PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEV  219 (270)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHH
Confidence            6678999999999999999999999999999999999999997653211      000          011234578999


Q ss_pred             HHHHHHHHhccC
Q 019551          282 GADTVLWLALQP  293 (339)
Q Consensus       282 ~A~~v~~l~s~~  293 (339)
                      +|+.+++++..+
T Consensus       220 va~~~~~~~~~~  231 (270)
T PRK06179        220 VADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHcCC
Confidence            999999998754

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=242.61  Aligned_cols=234  Identities=21%  Similarity=0.315  Sum_probs=188.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC----chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS----KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +++|+++||||++|||+++|+.|+++|++|++++|.    .+..++..+++...  +.++.++.+|++|.++++++++++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            568999999999999999999999999999997764    34444444444332  346889999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHH-HHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l-~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      .+.++++|++|||||.......  .+.+++++.+++|+.+++.+++++. +.|+++ ..+++|++||..+..        
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~--------  152 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIASVAGVR--------  152 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEECCchhcC--------
Confidence            8888899999999998764433  5778899999999999999999999 555544 568999999988763        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HH-HHHhccCCCHHHHHHHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FN-ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~-~~~~~~~~~~~e~A~~v~~  288 (339)
                          +.++...|+.+|++++.++++++.|+++.||++++|+||+++|++.....+.  .. ..+...+.+++|+|+.+++
T Consensus       153 ----~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  228 (249)
T PRK12827        153 ----GNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAF  228 (249)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHH
Confidence                3456778999999999999999999998999999999999999986654331  11 1123456699999999999


Q ss_pred             HhccCCCCCCCcce-eeCCCC
Q 019551          289 LALQPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~-~~d~~~  308 (339)
                      ++++.. ...+|.+ .+|+|.
T Consensus       229 l~~~~~-~~~~g~~~~~~~g~  248 (249)
T PRK12827        229 LVSDAA-SYVTGQVIPVDGGF  248 (249)
T ss_pred             HcCccc-CCccCcEEEeCCCC
Confidence            987543 4555655 568764

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=239.53  Aligned_cols=231  Identities=23%  Similarity=0.305  Sum_probs=192.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||+++||++++++|+++|++|++++|++++..+..+++...    .+..+.+|++|.++++++++++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999999999988776666555432    4567789999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||+|......  ..+.+++++.+++|+.+++.++++++|.|.++ +.++||++||..+..            
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  146 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGAGAALK------------  146 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECchHhcc------------
Confidence            999999999999765433  25778899999999999999999999999866 578999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      +.++...|+++|++++.++++++.++.+.||+++.++||++.|++.....+.   .....+.+++|+|+.+++++++...
T Consensus       147 ~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~---~~~~~~~~~~dva~~~~~~l~~~~~  223 (239)
T PRK12828        147 AGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD---ADFSRWVTPEQIAAVIAFLLSDEAQ  223 (239)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc---hhhhcCCCHHHHHHHHHHHhCcccc
Confidence            3456788999999999999999999988999999999999999865433221   1123467899999999999986554


Q ss_pred             CCCCcceeeCCCC
Q 019551          296 KLVSGSFYFDRAE  308 (339)
Q Consensus       296 ~~~~G~~~~d~~~  308 (339)
                      ...+..+.+||++
T Consensus       224 ~~~g~~~~~~g~~  236 (239)
T PRK12828        224 AITGASIPVDGGV  236 (239)
T ss_pred             cccceEEEecCCE
Confidence            4445555678875

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=243.20  Aligned_cols=214  Identities=24%  Similarity=0.280  Sum_probs=180.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-CCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-NKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  140 (339)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++.    +.++.++.+|++|.+++.++++.+... +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999887776655543    347889999999999999999988765 789


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||.......  .+.++++..+++|+.+++.+++++.++|+.+ +.++||++||..+..            +.+
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~~  144 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSASAIY------------GQP  144 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCchhhCc------------CCC
Confidence            9999999998765432  5778999999999999999999999999876 568999999987763            346


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-H--HHhccCCCHHHHHHHHHHHhcc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-E--RFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~--~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      +...|+.||+++++++++++.|+.++||+|++|+||+++|++......... .  .......+|+++|+.++.++..
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999999999998664111111 1  1122346899999999999853

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=5.4e-32  Score=240.62  Aligned_cols=237  Identities=25%  Similarity=0.318  Sum_probs=195.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||+++||++++++|+++|++|++++|+.++..+..+++....  .++.++.+|++|.++++++++++...+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999999888777777775442  358889999999999999999999889


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||+|......  ..+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++||..+..           .+
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~~~~~-----------~~  149 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSVAGPR-----------VG  149 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechHhhc-----------cC
Confidence            99999999999876543  25678899999999999999999999999876 468999999987651           13


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-HH-----HHhccCCCHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-NE-----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~-----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      .++...|+++|+++++++++++.++.+.|++++.++||+++|+......+.. ..     .+.+++.+++|+|+.+++++
T Consensus       150 ~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  229 (251)
T PRK12826        150 YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLA  229 (251)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            4567789999999999999999999999999999999999998765432211 11     12235689999999999998


Q ss_pred             ccCCCCCCCcceeeCCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~~  309 (339)
                      ..+.....+..+.+|+|..
T Consensus       230 ~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        230 SDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CccccCcCCcEEEECCCcc
Confidence            6544433344445687753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-32  Score=262.30  Aligned_cols=229  Identities=25%  Similarity=0.299  Sum_probs=184.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++||+++||||++|||+++|+.|+++|++|++++|..  +++++..++    .   ...++.+|++|.++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~----~---~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR----V---GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH----c---CCeEEEEeCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999853  222222222    1   23467899999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|++|||||+......  .+.++|+.++++|+.+++.+++++++.+..+ ++++||++||..+..          
T Consensus       280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~SS~~~~~----------  348 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVSSISGIA----------  348 (450)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcC----------
Confidence            999999999999998765433  5789999999999999999999999976544 568999999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHHH--HhccCCCHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNER--FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~~--~~~~~~~~~e~A~~v~~  288 (339)
                        +.++...|+++|+++++|+++++.|++++||++|+|+||+++|++......   +....  ...+...|+|+|++++|
T Consensus       349 --g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~  426 (450)
T PRK08261        349 --GNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAW  426 (450)
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHH
Confidence              356778999999999999999999999999999999999999987654311   11111  13456789999999999


Q ss_pred             HhccCCCCCCCcce-eeCCC
Q 019551          289 LALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       289 l~s~~~~~~~~G~~-~~d~~  307 (339)
                      |+++... +++|.. .+||+
T Consensus       427 l~s~~~~-~itG~~i~v~g~  445 (450)
T PRK08261        427 LASPASG-GVTGNVVRVCGQ  445 (450)
T ss_pred             HhChhhc-CCCCCEEEECCC
Confidence            9975444 455555 56776

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=241.84  Aligned_cols=220  Identities=23%  Similarity=0.241  Sum_probs=183.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ..+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.+.+
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            55789999999999999999999999999999999988777666666543  2368888999999999999999998888


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||......  ..+.+.+++.+++|+.+++.++++++|.|.++ ..++||++||..++.            +
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~g~iv~isS~~~~~------------~  152 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-RRGDLIFVGSDVALR------------Q  152 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECChHhcC------------C
Confidence            99999999999865433  35778899999999999999999999999766 568999999987763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----HHHH-------HhccCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----FNER-------FAGNLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~~-------~~~~~~~~~e~A~~  285 (339)
                      .++...|+++|+++++++++++.++.+.||++++|+||+++|++.....+.    ....       ...++..++|+|++
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a  232 (274)
T PRK07775        153 RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARA  232 (274)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHH
Confidence            456678999999999999999999998999999999999999864322111    1011       11347799999999


Q ss_pred             HHHHhccC
Q 019551          286 VLWLALQP  293 (339)
Q Consensus       286 v~~l~s~~  293 (339)
                      ++++++.+
T Consensus       233 ~~~~~~~~  240 (274)
T PRK07775        233 ITFVAETP  240 (274)
T ss_pred             HHHHhcCC
Confidence            99999754

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=241.95  Aligned_cols=223  Identities=22%  Similarity=0.279  Sum_probs=177.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |+++||||++|||+++|++|+++|++|++++|++ +.+++.    .+.. +.+++++.+|++|.++++++++++...++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999987 333322    2221 246888999999999999999988765542


Q ss_pred             --c--cEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          141 --V--HVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       141 --i--d~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                        +  +++|||||...+.   ...+.+++.+.+++|+.+++.+++.++|.|++.+..++||++||..+.           
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------  145 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-----------  145 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc-----------
Confidence              2  2899999986542   236789999999999999999999999999875456799999998765           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcc----hh--HHH-----HHhccCCCHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSM----PS--FNE-----RFAGNLRTSE  280 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~----~~--~~~-----~~~~~~~~~~  280 (339)
                       .+.++...|+++|+|+++|++.++.|++  +.||+|++|+||+++|++.....    +.  ...     .+.+++.+|+
T Consensus       146 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (251)
T PRK06924        146 -NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPE  224 (251)
T ss_pred             -CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHH
Confidence             3467788999999999999999999986  46899999999999999754210    00  001     1245788999


Q ss_pred             HHHHHHHHHhccCCCCCCCccee
Q 019551          281 EGADTVLWLALQPKEKLVSGSFY  303 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~  303 (339)
                      |+|+.+++++++.  .+.+|.++
T Consensus       225 dva~~~~~l~~~~--~~~~G~~~  245 (251)
T PRK06924        225 YVAKALRNLLETE--DFPNGEVI  245 (251)
T ss_pred             HHHHHHHHHHhcc--cCCCCCEe
Confidence            9999999999853  45566664

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=238.00  Aligned_cols=231  Identities=25%  Similarity=0.302  Sum_probs=185.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |+++||||++|||++++++|+++|++|++ ..|+.++.++...++...  +.++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999987 467777777776666543  346788999999999999999999988999


Q ss_pred             ccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccCC
Q 019551          141 VHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       141 id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|||||.....   ...+.++++..+++|+.+++.+++.+++.|.++.  +++++|++||..+..+           
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~-----------  148 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG-----------  148 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC-----------
Confidence            99999999976432   2357788999999999999999999999997652  3588999999876532           


Q ss_pred             CCcc-hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDG-MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~-~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                       .++ +..|+++|++++.++++++.|+.+.||++++++||+++||+.... .+....     .+..+..+|+|+|+.+++
T Consensus       149 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (247)
T PRK09730        149 -APGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVW  227 (247)
T ss_pred             -CCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Confidence             232 357999999999999999999999999999999999999975432 111111     123345689999999999


Q ss_pred             HhccCCCCCCCccee-eCCC
Q 019551          289 LALQPKEKLVSGSFY-FDRA  307 (339)
Q Consensus       289 l~s~~~~~~~~G~~~-~d~~  307 (339)
                      +++++.. +.+|.++ +|++
T Consensus       228 ~~~~~~~-~~~g~~~~~~g~  246 (247)
T PRK09730        228 LLSDKAS-YVTGSFIDLAGG  246 (247)
T ss_pred             hcChhhc-CccCcEEecCCC
Confidence            9986444 4566555 4664

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.2e-31  Score=234.22  Aligned_cols=234  Identities=26%  Similarity=0.341  Sum_probs=189.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||+++||+++++.|+++|++|+++.|+.++ .+...+++...  +.++.++.+|+++.+++.++++++.+.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999888887653 44445555433  346888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.+.+++.+++|+.+++.+++++++.+.+. +.+++|++||..+..            
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~iss~~~~~------------  147 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINISSVVGLM------------  147 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcccccCc------------
Confidence            889999999999876543  25778899999999999999999999999766 467999999986652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|+++|++++.++++++.++.+.||++++++||+++|++.....+.....     +.+.+.+++|+|+.+.+|+
T Consensus       148 ~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (248)
T PRK05557        148 GNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLA  227 (248)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            34567889999999999999999999999999999999999998765443322222     1245678999999999998


Q ss_pred             ccCCCCCCCcceeeCCC
Q 019551          291 LQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~  307 (339)
                      ........+..+.+|+|
T Consensus       228 ~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        228 SDEAAYITGQTLHVNGG  244 (248)
T ss_pred             CcccCCccccEEEecCC
Confidence            75333333344556766

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=242.58  Aligned_cols=209  Identities=21%  Similarity=0.247  Sum_probs=173.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..    .    ..+.++.+|+++.++++++++.+.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999987654432    1    136678899999999999999999889999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |++|||||......  ..+.+++++.+++|+.|++.++++++|.|++.  .++||++||..+..            +.++
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~------------~~~~  139 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVL------------VTPF  139 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccC------------CCCC
Confidence            99999999865443  35778999999999999999999999999754  58999999987763            3456


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------------HHHHH-------hccCCCH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------------FNERF-------AGNLRTS  279 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------------~~~~~-------~~~~~~~  279 (339)
                      ...|++||++++.++++++.|++++||+|++|+||+|+|++.......             ..+..       .....+|
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPA  219 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCH
Confidence            778999999999999999999999999999999999999976542110             00000       1224689


Q ss_pred             HHHHHHHHHHhcc
Q 019551          280 EEGADTVLWLALQ  292 (339)
Q Consensus       280 ~e~A~~v~~l~s~  292 (339)
                      +++|+.++..+..
T Consensus       220 ~~~a~~i~~~~~~  232 (274)
T PRK05693        220 AEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-31  Score=237.36  Aligned_cols=230  Identities=20%  Similarity=0.253  Sum_probs=185.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|++|||||++|||++++++|+++|++|++..|+ .+........+.+.  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999887764 34444444444433  235778899999999999999999998


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||.......  .+.+.+++.+++|+.+++.+++++.|.|++   .+++|++||..++            .
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~------------~  146 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGI------------R  146 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhcc------------C
Confidence            9999999999998655443  467788999999999999999999999864   4799999998876            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------hhHHHH--HhccCCCHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------PSFNER--FAGNLRTSEEGADTV  286 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------~~~~~~--~~~~~~~~~e~A~~v  286 (339)
                      +.++...|++||+++++++++++.|+++ +|+++.+.||+++|++.....       +.....  ..+++.+|+|+|+.+
T Consensus       147 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (252)
T PRK06077        147 PAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFV  225 (252)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHH
Confidence            5677889999999999999999999987 999999999999998753221       111111  124568999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++..+  ...++.|++|+|.
T Consensus       226 ~~~~~~~--~~~g~~~~i~~g~  245 (252)
T PRK06077        226 AAILKIE--SITGQVFVLDSGE  245 (252)
T ss_pred             HHHhCcc--ccCCCeEEecCCe
Confidence            9999633  3345667778774

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=240.12  Aligned_cols=238  Identities=24%  Similarity=0.335  Sum_probs=189.9

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |..++++|+++||||++|||++++++|+++|++|++++|+++..++..++..    +.++.++.+|++|++++.++++++
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   80 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTA   80 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHH
Confidence            3345789999999999999999999999999999999999876665544432    225788999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCC-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          135 SLKNKPVHVLVNNAGVLENN-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      .+.++++|+||||||..... .  ..+.+++++.+++|+.+++.+++.+++.|...+.+++|+++||..+.         
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~---------  151 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR---------  151 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc---------
Confidence            88889999999999987332 2  35778999999999999999999999998776334789999887665         


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------HHHH-----Hhcc
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------FNER-----FAGN  275 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~~~-----~~~~  275 (339)
                         .+.++...|+.+|++++.+++.++.++++.+|++++++||+++|++.....+.           ....     +.++
T Consensus       152 ---~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (264)
T PRK12829        152 ---LGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGR  228 (264)
T ss_pred             ---cCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCC
Confidence               24566778999999999999999999988999999999999999876433211           0001     1235


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+++|+|+.+++++++......+..+.+|+|.
T Consensus       229 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        229 MVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            789999999999998643333334445567764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=8e-32  Score=237.63  Aligned_cols=220  Identities=23%  Similarity=0.293  Sum_probs=172.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++++||||++|||+++|++|+++|  ..|++..|+....          ....++.++++|+++.++++++.+    .++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~----~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE----QFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH----hcC
Confidence            479999999999999999999985  5677777765321          123468889999999999887544    457


Q ss_pred             CccEEEEccccccCC--------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          140 PVHVLVNNAGVLENN--------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       140 ~id~lInnAG~~~~~--------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      ++|+||||||.....        ...+.+.+++.+++|+.+++.+++.++|.|+++ +.++|+++||..+....      
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~iss~~~~~~~------  139 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVISAKVGSISD------  139 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEEeeccccccc------
Confidence            899999999987532        124668899999999999999999999999765 45789999986543210      


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcC--CCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l  289 (339)
                         .+.+++..|+++|+++++|+++|+.|+++  +||+||+|+||+++|++......   ..+.+++.+|+|+|+.++++
T Consensus       140 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        140 ---NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ---NVPKGKLFTPEYVAQCLLGI  213 (235)
T ss_pred             ---CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh---ccccCCCCCHHHHHHHHHHH
Confidence               23456779999999999999999999986  69999999999999998654321   12345578999999999999


Q ss_pred             hccCCCCCCCccee-eCCCCC
Q 019551          290 ALQPKEKLVSGSFY-FDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~-~d~~~~  309 (339)
                      +++... ..+|.++ +||+-.
T Consensus       214 ~~~~~~-~~~g~~~~~~g~~~  233 (235)
T PRK09009        214 IANATP-AQSGSFLAYDGETL  233 (235)
T ss_pred             HHcCCh-hhCCcEEeeCCcCC
Confidence            986544 4466665 577643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=5.6e-32  Score=237.28  Aligned_cols=187  Identities=24%  Similarity=0.347  Sum_probs=167.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ...+|.|+|||+.+|.|+.+|++|.++|++|++.+.+++..+....+..    .++...+..|++++++++++.+.+++.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999988887777666553    357888899999999999999998874


Q ss_pred             C--CCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          138 N--KPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       138 ~--~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .  ..+..||||||+....   +..+.++++++++||++|++.+++.++|+++++  .||||++||..+..         
T Consensus       102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~---------  170 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRV---------  170 (322)
T ss_pred             cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCc---------
Confidence            3  4599999999976543   347889999999999999999999999999876  79999999999873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA  262 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  262 (339)
                         +.|...+|++||+|+++|+.++++|+.+.||.|..|-||..+|++..
T Consensus       171 ---~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  171 ---ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ---cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence               56788999999999999999999999999999999999999999876

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=237.42  Aligned_cols=234  Identities=24%  Similarity=0.234  Sum_probs=182.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+++...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999764 455555555443  34678899999999999999999988


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      .++.+|++|||||.....    ...++..+++|+.+++.+++++.|+|.+   .++||++||..+.....       ..+
T Consensus        81 ~~~~~d~vi~~ag~~~~~----~~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~-------~~~  146 (248)
T PRK07806         81 EFGGLDALVLNASGGMES----GMDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPT-------VKT  146 (248)
T ss_pred             hCCCCcEEEECCCCCCCC----CCCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCcc-------ccC
Confidence            889999999999865321    2235677899999999999999999853   47999999965431100       012


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc----chh---HHHHHhccCCCHHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS----MPS---FNERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~----~~~---~~~~~~~~~~~~~e~A~~v~~l  289 (339)
                      .+.+..|++||++++.++++++.|+++.||+||+|+||++.|++....    .+.   ....+.+++.+|+|+|+.++++
T Consensus       147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (248)
T PRK07806        147 MPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARA  226 (248)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999864321    121   1122346789999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++.+  ...+..|.+++++.
T Consensus       227 ~~~~--~~~g~~~~i~~~~~  244 (248)
T PRK07806        227 VTAP--VPSGHIEYVGGADY  244 (248)
T ss_pred             hhcc--ccCccEEEecCccc
Confidence            9732  23344466788764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=3e-31  Score=236.22  Aligned_cols=230  Identities=28%  Similarity=0.388  Sum_probs=183.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCC-ccEEEEeccCCC-HHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK--GETALSAIRSKTGN-ENVHLELCDLSS-ITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~Dl~~-~~~v~~~~~~~  134 (339)
                      +.+|+++||||++|||+++|+.|+++|++|+++.|+.+.  .+...+...  ..+ ..+.+..+|+++ .++++.+++.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            678999999999999999999999999999988888664  333333333  112 367888899998 99999999999


Q ss_pred             hcCCCCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          135 SLKNKPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      .+.+|++|++|||||+...   ....+.++|++++++|+.+++.+++.+.|+|+ . .  +||++||..+. .       
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~-~--~Iv~isS~~~~-~-------  148 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-K-Q--RIVNISSVAGL-G-------  148 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-h-C--eEEEECCchhc-C-------
Confidence            9999999999999999864   23367799999999999999999998888887 3 2  99999999876 3       


Q ss_pred             ccCCCCcc-hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH----HHH----HhccCCCHHHH
Q 019551          212 FNSGSFDG-MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF----NER----FAGNLRTSEEG  282 (339)
Q Consensus       212 ~~~~~~~~-~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~~----~~~~~~~~~e~  282 (339)
                           .++ +.+|++||+|+.+|+++++.|++++||+|++|+||+++|++........    ...    +..+...|+++
T Consensus       149 -----~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (251)
T COG1028         149 -----GPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEV  223 (251)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHH
Confidence                 223 5899999999999999999999999999999999999999876543221    111    22256789999


Q ss_pred             HHHHHHHhccCCCCCCCcce-eeCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSF-YFDRA  307 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~-~~d~~  307 (339)
                      ++.+.++.+.....+..|.. .+|++
T Consensus       224 ~~~~~~~~~~~~~~~~~g~~~~~~~~  249 (251)
T COG1028         224 AAAVAFLASDEAASYITGQTLPVDGG  249 (251)
T ss_pred             HHHHHHHcCcchhccccCCEEEeCCC
Confidence            99999887644233334433 34544

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=236.09  Aligned_cols=211  Identities=18%  Similarity=0.209  Sum_probs=177.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||++++++|+++|++|++++|++++.+...+++... ++.++.++.+|++++++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999998887777766544 345789999999999999999888754   46


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |++|||||......  ..+.+++++.+++|+.+++.+++++.|.|.++ +.+++|++||..+..            +.++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~~~~  144 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSVAGDR------------GRAS  144 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecccccC------------CCCC
Confidence            99999999765443  25678888999999999999999999999876 568999999987653            3456


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      ...|+++|+++.+++++++.|+.+.||+|++|+||+++|++.....     .+.....+|+|+|+.++.+++.+.
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-----LPGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC-----CCccccCCHHHHHHHHHHHHhCCC
Confidence            6789999999999999999999999999999999999998654321     012345789999999999987543

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-31  Score=267.43  Aligned_cols=237  Identities=22%  Similarity=0.295  Sum_probs=196.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+.||+++||||+||||+++|+.|+++|++|++++|+.+++++..+++...   .++.++.+|++|.++++++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998887777666543   36888999999999999999999988


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||.......  .+.++|+..+++|+.|++.+++.+++.|++++.+++||++||..+..            
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~------------  563 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN------------  563 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC------------
Confidence            9999999999998765443  57899999999999999999999999998764458999999987763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc--cCCCccCcc-----------hh-HHHH-----HhccC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA--ETPGVAKSM-----------PS-FNER-----FAGNL  276 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v--~T~~~~~~~-----------~~-~~~~-----~~~~~  276 (339)
                      +.++...|++||+++++++++++.|+++.||+||+|+||.+  .|++.....           +. ..+.     +.+++
T Consensus       564 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~  643 (681)
T PRK08324        564 PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKRE  643 (681)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCc
Confidence            34677899999999999999999999999999999999999  887654321           00 0011     23456


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ..++|+|+++++++++.....++..+.+|||..
T Consensus       644 v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        644 VTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            789999999999997444444444566798853

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2.9e-31  Score=236.60  Aligned_cols=233  Identities=24%  Similarity=0.294  Sum_probs=190.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||+++||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999988877776666543  346888999999999999999999888889


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++|||||......  ..+.+++++++++|+.+++.+++.+++.|++. +.+++|++||..+..            +.+
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~------------~~~  145 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASAHGLV------------ASP  145 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcC------------CCC
Confidence            999999999875433  25678899999999999999999999999776 567999999987652            346


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-----------H-HH-----HhccCCCHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-----------N-ER-----FAGNLRTSEE  281 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----------~-~~-----~~~~~~~~~e  281 (339)
                      +...|+.+|+++++++++++.++.+.||+|+.++||++.|++.....+..           . ..     ....+.+++|
T Consensus       146 ~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       146 FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence            67899999999999999999999888999999999999998643221110           0 00     1134788999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|++++++++++.....++.|.+|+|-
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCcc
Confidence            999999999764444444556678763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-31  Score=237.68  Aligned_cols=216  Identities=22%  Similarity=0.294  Sum_probs=182.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++++|||||++|||+++++.|+++|++|++++|++++.++..+++...  +.++.++.+|++|.+++.++++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988877777776554  346888999999999999999999888899


Q ss_pred             ccEEEEccccccCCCC--C-ChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          141 VHVLVNNAGVLENNRL--I-TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~-~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      +|++|||||.......  . +.+++++.+++|+.+++.+++.++|.|.+.  .+++|++||..++.            +.
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~------------~~  144 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLT------------GV  144 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccC------------CC
Confidence            9999999998664432  4 678899999999999999999999998754  58999999987763            35


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH----HH--hccCCCHHHHHHHHHHHhc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE----RF--AGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----~~--~~~~~~~~e~A~~v~~l~s  291 (339)
                      ++...|+++|+++++++++++.++.++||++++++||++.|++..........    ..  ..++.+|+|+|+.+++++.
T Consensus       145 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        145 PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIA  224 (263)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhh
Confidence            66789999999999999999999999999999999999999976533211000    11  1357899999999999996


Q ss_pred             c
Q 019551          292 Q  292 (339)
Q Consensus       292 ~  292 (339)
                      .
T Consensus       225 ~  225 (263)
T PRK06181        225 R  225 (263)
T ss_pred             C
Confidence            4

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9e-31  Score=232.12  Aligned_cols=235  Identities=24%  Similarity=0.342  Sum_probs=189.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.|++|||||+++||++++++|+++|++|+++.|+.++. +...+.+...  +.++.++.+|++|.+++.++++++.+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999988877765543 3344444333  346889999999999999999999888


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++.+|++|||||.......  .+.+++++.+++|+.+++.+++.+++++++. +.+++|++||..+..            
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~~------------  148 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSVAGLP------------  148 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECccccCC------------
Confidence            8899999999997655442  5778899999999999999999999999776 568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|+.+|++++++++.++.++.+.||+++.++||++.|++..........     .+.+++.+++|+++.+.+++
T Consensus       149 ~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  228 (249)
T PRK12825        149 GWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLC  228 (249)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            3456789999999999999999999998999999999999999987654322211     12345678999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++......+..|.+++|+
T Consensus       229 ~~~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        229 SDASDYITGQVIEVTGGV  246 (249)
T ss_pred             CccccCcCCCEEEeCCCE
Confidence            765444444455567774

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=269.30  Aligned_cols=216  Identities=28%  Similarity=0.368  Sum_probs=185.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            577999999999999999999999999999999999999888888777654  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC----CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~----~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|++|||||.......    .+.+++++++++|+.+++.+++.++|.|+++ +.++||++||.+++.          
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~----------  514 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSSIGVQT----------  514 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcC----------
Confidence            9999999999998644332    1247899999999999999999999999876 568999999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                        +.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...... .   ......+|+++|+.++..+..
T Consensus       515 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-~---~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        515 --NAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-Y---NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-c---cCCCCCCHHHHHHHHHHHHHh
Confidence              356778999999999999999999999999999999999999998653211 0   112357899999999997753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.1e-30  Score=231.18  Aligned_cols=234  Identities=24%  Similarity=0.357  Sum_probs=192.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||+++||+++++.|+++|++|++++|++++.+...+++...  +.++.++.+|++|++++.++++++...+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999988877777666543  3468888999999999999999988888


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||......  ..+.+++++.++.|+.+++.+++++.|+|.+. +.++||++||..+..            +
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~~~~~------------~  147 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSVSGVT------------G  147 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhcc------------C
Confidence            99999999999866533  35778899999999999999999999999766 458999999987652            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .++...|+.+|++++.++++++.++.+.|++++.|+||.+.+++.........+.     +.+.+.+++|+|+.++++++
T Consensus       148 ~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  227 (246)
T PRK05653        148 NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLAS  227 (246)
T ss_pred             CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            4556789999999999999999999989999999999999998765322211111     12456789999999999987


Q ss_pred             cCCCCCCCcce-eeCCCC
Q 019551          292 QPKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~-~~d~~~  308 (339)
                      .... ..+|.+ .++||.
T Consensus       228 ~~~~-~~~g~~~~~~gg~  244 (246)
T PRK05653        228 DAAS-YITGQVIPVNGGM  244 (246)
T ss_pred             chhc-CccCCEEEeCCCe
Confidence            4433 445554 568774

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.1e-33  Score=220.70  Aligned_cols=228  Identities=26%  Similarity=0.364  Sum_probs=195.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .+|-+++||||.+|+|++.|++|+++|+.|++.+...++.++..+++     +.++.+.+.|++++++++..+...+.+|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            56789999999999999999999999999999999999888888776     5689999999999999999999999999


Q ss_pred             CCccEEEEccccccCC--------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEEcCccccccc
Q 019551          139 KPVHVLVNNAGVLENN--------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-----PDARVITVSSGGMYTAH  205 (339)
Q Consensus       139 ~~id~lInnAG~~~~~--------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----~~~~Iv~vsS~~~~~~~  205 (339)
                      |++|.+|||||+....        ...+.|++++.+++|+.|+|+.++...-.|-++.     ..|.||+..|.+++   
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf---  158 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF---  158 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee---
Confidence            9999999999986532        1257799999999999999999999999997542     25789999999887   


Q ss_pred             cCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-------HhccCCC
Q 019551          206 LTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-------FAGNLRT  278 (339)
Q Consensus       206 ~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~  278 (339)
                               .+..+.++|++||.++.+++--++++++..|||++.|.||..+||+.... |+..+.       +..+++.
T Consensus       159 ---------dgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl-pekv~~fla~~ipfpsrlg~  228 (260)
T KOG1199|consen  159 ---------DGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL-PEKVKSFLAQLIPFPSRLGH  228 (260)
T ss_pred             ---------cCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh-hHHHHHHHHHhCCCchhcCC
Confidence                     35678999999999999999999999999999999999999999987654 332222       2467899


Q ss_pred             HHHHHHHHHHHhccCCCCCCCc-ceeeCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSG-SFYFDRA  307 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G-~~~~d~~  307 (339)
                      |.|-|..+-.....+   +.+| .+.+||.
T Consensus       229 p~eyahlvqaiienp---~lngevir~dga  255 (260)
T KOG1199|consen  229 PHEYAHLVQAIIENP---YLNGEVIRFDGA  255 (260)
T ss_pred             hHHHHHHHHHHHhCc---ccCCeEEEecce
Confidence            999999988887543   3444 4567875

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-31  Score=232.98  Aligned_cols=218  Identities=22%  Similarity=0.239  Sum_probs=194.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++|||||+|||+++|..+..+|++|.++.|+.++++++.+++.-.....++.+..+|+.|.+++..+++++++.++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            78999999999999999999999999999999999999999999876655568899999999999999999999999999


Q ss_pred             cEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |.+|||||...++.+  .+.++++..+++|++|+++++++.+|.|++..+.|+|+.+||..+.            -++.|
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~------------~~i~G  181 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM------------LGIYG  181 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh------------cCccc
Confidence            999999999887765  6889999999999999999999999999988667899999999887            46899


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHHHHh--ccCCCHHHHHHHHHHHhc
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNERFA--GNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~--~~~~~~~e~A~~v~~l~s  291 (339)
                      +++|+++|+|+.+|+.++++|+.++||+|....|+.+.||+..+..   |+......  .....+||+|..++.-+.
T Consensus       182 ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  182 YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999887653   33222222  335689999999987764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.3e-31  Score=231.79  Aligned_cols=231  Identities=18%  Similarity=0.208  Sum_probs=185.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||.++++.|+++|++|++++|+++++++..+++...   .+++++.+|+++.++++++++++...+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999988777665555432   257889999999999999999988888


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +++|.+|+|+|........+.++++.++++|+.+++.+.+.++|+|.+   ++++|++||..+..           .+.+
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~-----------~~~~  145 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIY-----------KASP  145 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcc-----------cCCC
Confidence            899999999997654444455889999999999999999999999853   47899999976532           1345


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLV  298 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~  298 (339)
                      ....|++||++++.++++++.++.+.||++++|+||+++|++.................+++++|+.++++++++.. ..
T Consensus       146 ~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~-~~  224 (238)
T PRK05786        146 DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEAD-WV  224 (238)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhccccc-Cc
Confidence            56789999999999999999999999999999999999998642210000001112357899999999999976444 44


Q ss_pred             Ccce-eeCCC
Q 019551          299 SGSF-YFDRA  307 (339)
Q Consensus       299 ~G~~-~~d~~  307 (339)
                      .|.+ .+|++
T Consensus       225 ~g~~~~~~~~  234 (238)
T PRK05786        225 DGVVIPVDGG  234 (238)
T ss_pred             cCCEEEECCc
Confidence            5554 55765

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-30  Score=229.39  Aligned_cols=224  Identities=24%  Similarity=0.283  Sum_probs=186.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+++++||||+|+||++++++|+++|++|++++|+++++++..+++...   .+++++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998887777776543   368889999999999999999998888


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||+|......  ..+.+++++.+++|+.+++.+++++++.|.+  +.++||++||..+..            +
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~------------~  146 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--GGGYIINISSLAGTN------------F  146 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--CCeEEEEECChhhcc------------C
Confidence            99999999999765443  2577889999999999999999999999833  458999999987652            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK  296 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~  296 (339)
                      .++...|+++|+++.++++.++.|+.+.|+++++|+||++.|++........    .....+++|+|+.+++++..+...
T Consensus       147 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~----~~~~~~~~d~a~~~~~~l~~~~~~  222 (237)
T PRK07326        147 FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK----DAWKIQPEDIAQLVLDLLKMPPRT  222 (237)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh----hhccCCHHHHHHHHHHHHhCCccc
Confidence            4566789999999999999999999999999999999999998764432111    112468999999999999876543


Q ss_pred             CCCcceee
Q 019551          297 LVSGSFYF  304 (339)
Q Consensus       297 ~~~G~~~~  304 (339)
                       ..+.+.+
T Consensus       223 -~~~~~~~  229 (237)
T PRK07326        223 -LPSKIEV  229 (237)
T ss_pred             -cccceEE
Confidence             3444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.5e-32  Score=223.75  Aligned_cols=184  Identities=24%  Similarity=0.238  Sum_probs=162.5

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc-C
Q 019551           60 EGKNCVVTGAN-AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL-K  137 (339)
Q Consensus        60 ~~k~vlITGas-~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~  137 (339)
                      +.|.|+|||++ ||||.++|++|++.|+.|+.++|+.+....+..+       ..+....+|+++++++..+..++++ .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45889999986 8999999999999999999999998876655432       2478899999999999999999988 7


Q ss_pred             CCCccEEEEccccccCC--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENN--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+|+||||..-..  .+.+.+..+++|++|++|++.++|++...+.+.  +|.||+++|..++.            
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~v------------  144 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVV------------  144 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEe------------
Confidence            89999999999976433  346889999999999999999999999666554  79999999999884            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS  264 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  264 (339)
                      ++|..+.|++||||+.++++.|+.|+++.||+|..+.||.|.|++....
T Consensus       145 pfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  145 PFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             ccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            5788899999999999999999999999999999999999999987663

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.9e-31  Score=230.85  Aligned_cols=216  Identities=19%  Similarity=0.229  Sum_probs=173.8

Q ss_pred             EEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEE
Q 019551           65 VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL  144 (339)
Q Consensus        65 lITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l  144 (339)
                      +||||++|||++++++|+++|++|++++|++++++...+++.+   +.+++++.+|++|++++.++++++    +++|+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999999999998877766666542   346888999999999999988763    689999


Q ss_pred             EEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          145 VNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       145 InnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      |||+|......  ..+.+++++++++|+.+++.+++  .+.|.   +.++||++||.+++.            +.++...
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~~~~~------------~~~~~~~  136 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGFAAVR------------PSASGVL  136 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECchhhcC------------CCCcchH
Confidence            99999866543  25778999999999999999999  44443   468999999998863            4567789


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----HHHH-----HhccCCCHHHHHHHHHHHhccC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----FNER-----FAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~~-----~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      |+++|+++++++++++.|+.+  |+|++++||+++|++.....++    ..+.     +.++..+|+|+|+.+++|+++ 
T Consensus       137 Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  213 (230)
T PRK07041        137 QGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN-  213 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC-
Confidence            999999999999999999974  9999999999999875432111    1111     124567899999999999974 


Q ss_pred             CCCCCCcceeeCCCC
Q 019551          294 KEKLVSGSFYFDRAE  308 (339)
Q Consensus       294 ~~~~~~G~~~~d~~~  308 (339)
                       ....+..+.+|||.
T Consensus       214 -~~~~G~~~~v~gg~  227 (230)
T PRK07041        214 -GFTTGSTVLVDGGH  227 (230)
T ss_pred             -CCcCCcEEEeCCCe
Confidence             23445566778874

>PRK09135 pteridine reductase; Provisional

Probab=99.98  E-value=4.3e-30  Score=228.10  Aligned_cols=233  Identities=17%  Similarity=0.186  Sum_probs=183.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ..++++|||||++|||++++++|+++|++|++++|+. +..++..+.+.... ...+.++.+|+++.+++.++++++.+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999864 44454444444332 235788999999999999999999998


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|++|||||......  ..+.++++..+++|+.|++.+++++.|.+.++  .+.+++++|....            .
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~------------~  148 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAE------------R  148 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhc------------C
Confidence            999999999999865443  24678899999999999999999999998764  4788888775443            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-HH-----HhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-ER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|++||++++.++++++.++.+ +|++++++||++.||+.....+... ..     +.....+++|+|+.++++
T Consensus       149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  227 (249)
T PRK09135        149 PLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFL  227 (249)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence            4567889999999999999999999965 7999999999999997643322211 11     123456899999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+ .....+..|.+++|.
T Consensus       228 ~~~-~~~~~g~~~~i~~g~  245 (249)
T PRK09135        228 LAD-ASFITGQILAVDGGR  245 (249)
T ss_pred             cCc-cccccCcEEEECCCe
Confidence            864 222334445667764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=234.60  Aligned_cols=214  Identities=20%  Similarity=0.252  Sum_probs=176.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .|++|||||+||||+++|++|+++|++|++++|+++.+++..++.     ..++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999987665544332     236888999999999999999998888899


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||.......  .+.+++++.+++|+.+++.++++++|+|+++ +.++||++||.++..            +.+
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~~~  143 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQI------------AYP  143 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccc------------CCC
Confidence            9999999998765433  5678899999999999999999999999766 568999999987652            356


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--------hh-----HHHHHh----ccCCCHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------PS-----FNERFA----GNLRTSEE  281 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------~~-----~~~~~~----~~~~~~~e  281 (339)
                      +...|++||+++++++++++.+++++||+++.++||.+.|++.....        ..     ......    ....++++
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  223 (276)
T PRK06482        144 GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQK  223 (276)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHH
Confidence            77899999999999999999999999999999999999988643211        00     111111    12368999


Q ss_pred             HHHHHHHHhcc
Q 019551          282 GADTVLWLALQ  292 (339)
Q Consensus       282 ~A~~v~~l~s~  292 (339)
                      ++++++.++..
T Consensus       224 ~~~a~~~~~~~  234 (276)
T PRK06482        224 MVQAMIASADQ  234 (276)
T ss_pred             HHHHHHHHHcC
Confidence            99999999853

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=230.78  Aligned_cols=202  Identities=22%  Similarity=0.245  Sum_probs=167.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++||||++|||+++|++|+++|++|++++|+++++++..++      ..++.++.+|++|.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            6899999999999999999999999999999998766554332      23578899999999999999887642   47


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |++|||||......  ..+.+++++++++|+.+++.+++.++|+|.+   +++||++||..+..            +.++
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~------------~~~~  137 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASEL------------ALPR  137 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhcc------------CCCC
Confidence            99999999754322  3578889999999999999999999999853   47899999987663            3567


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ...|+++|+++++|+++++.|++++||+|++|+||+++|++.......     .....+|+++|+.++..+..
T Consensus       138 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~-----~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        138 AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA-----MPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC-----CCcccCHHHHHHHHHHHHhc
Confidence            789999999999999999999999999999999999999986543110     11246899999999988764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=1e-30  Score=218.55  Aligned_cols=233  Identities=16%  Similarity=0.208  Sum_probs=198.1

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++||+.||+|-.  +.|+..||+.|.++|++++.+..++ ++++..+++.+..+  ...+++||+++.++++++++++.
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence            4889999999964  7999999999999999999999986 77888888877654  35678999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLENNR------LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +++|++|.|||+.|+.....      .++.+.|...+++..++...+++++.|+|.   ++|.|+.++-.++.       
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~---~ggSiltLtYlgs~-------  149 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN---NGGSILTLTYLGSE-------  149 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC---CCCcEEEEEeccce-------
Confidence            99999999999999887432      267899999999999999999999999997   46899999887765       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--ch-----hHHHHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MP-----SFNERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~-----~~~~~~~~~~~~~~e~  282 (339)
                           +..|.+-..+.+|+++++-+|.||.+++++|||||+|+.|+++|=.....  +.     .....|.++..++|||
T Consensus       150 -----r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeV  224 (259)
T COG0623         150 -----RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEV  224 (259)
T ss_pred             -----eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHh
Confidence                 34677789999999999999999999999999999999999999322111  11     1122356788899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.+||+|+-....++...++|+|-
T Consensus       225 G~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         225 GNTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             hhhHHHHhcchhcccccceEEEcCCc
Confidence            99999999987777777777899984

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=224.13  Aligned_cols=186  Identities=16%  Similarity=0.099  Sum_probs=157.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||++|||+++|++|+++ ++|++++|+.+                   .+.+|++|.++++++++++    +++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKV----GKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhc----CCCC
Confidence            6899999999999999999999 99999999753                   2579999999999988753    6899


Q ss_pred             EEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          143 VLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       143 ~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +||||||.......  .+.++|++.+++|+.+++.+++.++|+|.+   .++|+++||..+.            .+.++.
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~------------~~~~~~  122 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSD------------EPIPGG  122 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccC------------CCCCCc
Confidence            99999998654432  577899999999999999999999999963   4889999998776            345778


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ..|+++|+|+++|+++++.|+ ++||+||+|+||+++|++.....    ........+|+|+|+.++.+++.
T Consensus       123 ~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~----~~~~~~~~~~~~~a~~~~~~~~~  189 (199)
T PRK07578        123 ASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP----FFPGFEPVPAARVALAYVRSVEG  189 (199)
T ss_pred             hHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh----cCCCCCCCCHHHHHHHHHHHhcc
Confidence            899999999999999999999 88999999999999998642110    01122457899999999999863

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=1.1e-29  Score=224.06  Aligned_cols=228  Identities=26%  Similarity=0.402  Sum_probs=184.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +||||++++||.+++++|+++|++|++++|+. +.+++..+.+...  +.++.++.+|++|+++++++++.+.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 4445555555433  24688999999999999999999988889999


Q ss_pred             EEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          143 VLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       143 ~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      ++|||||......  ..+.+.+++.+++|+.+++.+++.+.+.+.+. +.++++++||.++..            +.++.
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~------------g~~~~  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINISSVVGLM------------GNAGQ  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEECCccccC------------CCCCC
Confidence            9999999865433  25678899999999999999999999998765 468999999987663            34567


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhccCCC
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      ..|+++|++++.++++++.++...|++++.++||+++|++.....+.....     +..++.+++|+|+.+++++.++..
T Consensus       146 ~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  225 (239)
T TIGR01830       146 ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEAS  225 (239)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccC
Confidence            899999999999999999999999999999999999998754432222222     124577899999999999865433


Q ss_pred             CCCCcce-eeCCC
Q 019551          296 KLVSGSF-YFDRA  307 (339)
Q Consensus       296 ~~~~G~~-~~d~~  307 (339)
                       ..+|++ .+|+|
T Consensus       226 -~~~g~~~~~~~g  237 (239)
T TIGR01830       226 -YITGQVIHVDGG  237 (239)
T ss_pred             -CcCCCEEEeCCC
Confidence             445554 45655

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=228.13  Aligned_cols=209  Identities=22%  Similarity=0.300  Sum_probs=167.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH-HhcCC--
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR-FSLKN--  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~--  138 (339)
                      ++++||||++|||+++|++|+++|++|++++|+.++.  .    ... .+.++.++.+|+++.+++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3799999999999999999999999999999986541  1    111 234688899999999999998776 44433  


Q ss_pred             -CCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          139 -KPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       139 -~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       +++|++|||||.....   ...+.+++++.+++|+.+++.+++.+++.|.++ ..++||++||..+.            
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~------------  141 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSGAAR------------  141 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeChhhc------------
Confidence             4799999999986542   235788999999999999999999999999875 56899999998776            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------chh----HHHHHhccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------MPS----FNERFAGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------~~~----~~~~~~~~~~~~~e~A  283 (339)
                      .+.+++..|+++|++++++++.++.+ .+.||++++|+||+++|++....       .+.    ....+.+++.+|+|+|
T Consensus       142 ~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  220 (243)
T PRK07023        142 NAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAA  220 (243)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHH
Confidence            34677889999999999999999999 78899999999999999874321       111    0111235678999999


Q ss_pred             HH-HHHHhc
Q 019551          284 DT-VLWLAL  291 (339)
Q Consensus       284 ~~-v~~l~s  291 (339)
                      .. +.+|.+
T Consensus       221 ~~~~~~l~~  229 (243)
T PRK07023        221 RRLIAYLLS  229 (243)
T ss_pred             HHHHHHHhc
Confidence            95 556654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=220.90  Aligned_cols=200  Identities=19%  Similarity=0.245  Sum_probs=164.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||+++|++|+++|++|++++|++++.++.. ++      .++.+..+|++|.++++++++.+..  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL------PGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc------cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            68999999999999999999999999999999987654331 11      2466788999999999999998754  479


Q ss_pred             cEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          142 HVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       142 d~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      |++|||||+....    ...+.+++++.+++|+.+++.++++++|.|++.  .++++++||..+..+.         .+.
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~---------~~~  141 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVEL---------PDG  141 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCcccccc---------CCC
Confidence            9999999986432    235778899999999999999999999998643  4789999987655321         122


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .++..|+++|++++.|+++++.|++++||+||+|+||+++|++.....          ..++++.+..++..+.
T Consensus       142 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~----------~~~~~~~~~~~~~~~~  205 (225)
T PRK08177        142 GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA----------PLDVETSVKGLVEQIE  205 (225)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC----------CCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999999865432          1467888888887774

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=220.33  Aligned_cols=211  Identities=22%  Similarity=0.195  Sum_probs=169.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||++++++|+++|++|++++|++++.++..+.....  +.++.++.+|++|.+++.++++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            579999999999999999999999999999999987766665544433  2358889999999999877654      37


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||......  ..+.+.++..+++|+.+++.+++.+++.|.+. +.++||++||..+..            +.+
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~------------~~~  140 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLI------------TGP  140 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhcc------------CCC
Confidence            999999999876443  35778899999999999999999999999876 458999999987653            345


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH------H----H----HHhccCCCHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF------N----E----RFAGNLRTSEEGAD  284 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~----~----~~~~~~~~~~e~A~  284 (339)
                      +...|++||++++++++.++.|+.+.||++++|+||++.|++........      .    .    .......+++++++
T Consensus       141 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK09291        141 FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMID  220 (257)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHH
Confidence            67789999999999999999999999999999999999998753221100      0    0    00112357899988


Q ss_pred             HHHHHhcc
Q 019551          285 TVLWLALQ  292 (339)
Q Consensus       285 ~v~~l~s~  292 (339)
                      .++.++..
T Consensus       221 ~~~~~l~~  228 (257)
T PRK09291        221 AMVEVIPA  228 (257)
T ss_pred             HHHHHhcC
Confidence            88887753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-29  Score=220.46  Aligned_cols=198  Identities=15%  Similarity=0.119  Sum_probs=150.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++|+++||||++|||+++|++|+++|++|++++|++....+   .. ..  . ....+.+|++|.+++.+.       
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~~~~~~-------   76 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEESLDKQ-------   76 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHHHHHHh-------
Confidence            3679999999999999999999999999999999998732111   11 11  1 125678999999887643       


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+... ...+.+++++.+++|+.+++.++++++|.|.+++  .++.+++.+|.++..            
T Consensus        77 ~~~iDilVnnAG~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~------------  143 (245)
T PRK12367         77 LASLDVLILNHGINPG-GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ------------  143 (245)
T ss_pred             cCCCCEEEECCccCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC------------
Confidence            4689999999997543 2357889999999999999999999999997631  233444445554431            


Q ss_pred             CCcchHHHHHhHHHHHHH---HHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          216 SFDGMEQYARNKRVQVAL---TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l---~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      + ++...|++||+|+..+   .+.++.|+.+.||+|+.+.||+++|++..           ....+|+|+|+.+++.+..
T Consensus       144 ~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        144 P-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             C-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------cCCCCHHHHHHHHHHHHhc
Confidence            1 2456799999998654   34555566788999999999999998632           1247899999999999864


Q ss_pred             CC
Q 019551          293 PK  294 (339)
Q Consensus       293 ~~  294 (339)
                      ..
T Consensus       212 ~~  213 (245)
T PRK12367        212 GL  213 (245)
T ss_pred             CC
Confidence            33

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.3e-29  Score=210.18  Aligned_cols=161  Identities=28%  Similarity=0.507  Sum_probs=145.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC--chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS--KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      |+++||||++|||+++|++|+++|. +|++++|+  .+..++..+++...  +.++.++.+|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 78899999  67777777877744  4689999999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|++|||||.......  .+.++|++++++|+.+++.+.+.++|    + ++++||++||.++.            .+
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~g~iv~~sS~~~~------------~~  141 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----Q-GGGKIVNISSIAGV------------RG  141 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----H-TTEEEEEEEEGGGT------------SS
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee----c-cccceEEecchhhc------------cC
Confidence            999999999999885443  56799999999999999999999999    2 57999999999987            45


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMY  241 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~  241 (339)
                      .+++..|++||+|+.+|+++++.|+
T Consensus       142 ~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  142 SPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhc
Confidence            7889999999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=4.1e-28  Score=214.33  Aligned_cols=200  Identities=25%  Similarity=0.330  Sum_probs=169.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|+++||||+||||+++|++|+++|+ +|++++|+.+++++        . +.++.++.+|++|.++++++++.    
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~-~~~~~~~~~D~~~~~~~~~~~~~----   70 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------L-GPRVVPLQLDVTDPASVAAAAEA----   70 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------c-CCceEEEEecCCCHHHHHHHHHh----
Confidence            6789999999999999999999999999 99999999876443        1 34688999999999999887775    


Q ss_pred             CCCccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|++|||||... ...  ..+.+++++.+++|+.+++.+++++.|.+++. +.+++|++||..+..           
T Consensus        71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~-----------  138 (238)
T PRK08264         71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-GGGAIVNVLSVLSWV-----------  138 (238)
T ss_pred             cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcc-----------
Confidence            367999999999833 222  35778999999999999999999999999876 578999999987763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                       +.++...|+.+|++++++++.++.++.++||++++++||.++|++.....        ....+++++|+.++..+..
T Consensus       139 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~--------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        139 -NFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD--------APKASPADVARQILDALEA  207 (238)
T ss_pred             -CCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC--------cCCCCHHHHHHHHHHHHhC
Confidence             45677899999999999999999999999999999999999998754321        1247899999999988753

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=4e-29  Score=221.50  Aligned_cols=207  Identities=21%  Similarity=0.183  Sum_probs=158.8

Q ss_pred             HHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCCCC
Q 019551           77 TAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL  156 (339)
Q Consensus        77 ~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~  156 (339)
                      +|++|+++|++|++++|+.++.+     +        ..++.+|++|.++++++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999977532     1        2356899999999999998774   68999999999763    


Q ss_pred             CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc---------c------ccCCCCcchH
Q 019551          157 ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL---------E------FNSGSFDGME  221 (339)
Q Consensus       157 ~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~---------~------~~~~~~~~~~  221 (339)
                        .+.+++.+++|+.+++.+++.++|+|.+   .|+||++||.+++......+.         .      ....+.++..
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence              2458899999999999999999999853   489999999987632100000         0      0002456778


Q ss_pred             HHHHhHHHHHHHHHHHH-HHHcCCCeEEEEeeCCcccCCCccCcchh----HH---HHHhccCCCHHHHHHHHHHHhccC
Q 019551          222 QYARNKRVQVALTEKWS-EMYKEKGIGFYSMHPGWAETPGVAKSMPS----FN---ERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la-~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~---~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      .|++||+|+++++++++ .|++++||+||+|+||+++|++.....+.    ..   ..+.+++.+|+|+|+.++||++++
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence            99999999999999999 99999999999999999999986543211    10   113456789999999999999755


Q ss_pred             CCCCCCcceeeCCCC
Q 019551          294 KEKLVSGSFYFDRAE  308 (339)
Q Consensus       294 ~~~~~~G~~~~d~~~  308 (339)
                      ....++..+.+|||.
T Consensus       216 ~~~~~G~~i~vdgg~  230 (241)
T PRK12428        216 ARWINGVNLPVDGGL  230 (241)
T ss_pred             hcCccCcEEEecCch
Confidence            444444445678874

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=5.9e-28  Score=215.53  Aligned_cols=213  Identities=23%  Similarity=0.231  Sum_probs=174.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-CC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-NK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~  139 (339)
                      .|+++||||+||||+++++.|+++|++|++++|+.++++...    .    ..+..+.+|++|.+++.++++.+... .+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999999987655432    1    13677889999999999999888664 47


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|.+|||||......  ..+.+++++.+++|+.|++.+++.+++.|.+. +.++||++||..+..            +.
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~------------~~  140 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLI------------ST  140 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCccccc------------CC
Confidence            8999999999765433  35788999999999999999999999999876 568999999987653            34


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh------HHHH-HhccCCCHHHHHHHHHHHh
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNER-FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~~-~~~~~~~~~e~A~~v~~l~  290 (339)
                      ++...|+++|++++.++++++.++.+.||+++.|+||+++|++.......      .... ....+.+|+|+++.+..++
T Consensus       141 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~  220 (256)
T PRK08017        141 PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHAL  220 (256)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence            56778999999999999999999999999999999999999876532111      0011 1123578999999999998


Q ss_pred             ccCC
Q 019551          291 LQPK  294 (339)
Q Consensus       291 s~~~  294 (339)
                      ..+.
T Consensus       221 ~~~~  224 (256)
T PRK08017        221 ESPK  224 (256)
T ss_pred             hCCC
Confidence            7544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.8e-27  Score=206.15  Aligned_cols=213  Identities=20%  Similarity=0.230  Sum_probs=168.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||++++++|++.|++|++++|+.++.++..    ..    .+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            68999999999999999999999999999999977654332    11    356789999999999998877642  479


Q ss_pred             cEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          142 HVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       142 d~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      |++|||+|.....    ...+.++++..+++|+.+++.++++++|+|.+.  .++++++||..+..+.         .+.
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~---------~~~  140 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGD---------ATG  140 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCccccccc---------ccC
Confidence            9999999987422    135789999999999999999999999998653  5789999997664321         011


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      .....|+++|++++++++.++.++  .+++||+|+||+++|++....          ....+++.++.++.++.... ..
T Consensus       141 ~~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~  207 (222)
T PRK06953        141 TTGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ----------AALDPAQSVAGMRRVIAQAT-RR  207 (222)
T ss_pred             CCccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC----------CCCCHHHHHHHHHHHHHhcC-cc
Confidence            112369999999999999999886  479999999999999985432          23688999999999876443 45


Q ss_pred             CCccee-eCCCC
Q 019551          298 VSGSFY-FDRAE  308 (339)
Q Consensus       298 ~~G~~~-~d~~~  308 (339)
                      ..|.|+ .|++.
T Consensus       208 ~~~~~~~~~~~~  219 (222)
T PRK06953        208 DNGRFFQYDGVE  219 (222)
T ss_pred             cCceEEeeCCcC
Confidence            677777 47654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=4.8e-28  Score=202.41  Aligned_cols=226  Identities=18%  Similarity=0.230  Sum_probs=178.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+|++|+||+|+|||..++..+...+-.....+++....+  .+.+...++ ........|++...-+.++++..+.+++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4688999999999999999988888765444444333222  333333444 3344455688888888999999999999


Q ss_pred             CccEEEEccccccCCC-----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          140 PVHVLVNNAGVLENNR-----LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       140 ~id~lInnAG~~~~~~-----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ..|++|||||...+..     ..+.++|.+.++.|+++++.+.+.++|.++++.-.+.|||+||.++.            
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------------  149 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------------  149 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------------
Confidence            9999999999887643     35778999999999999999999999999887446899999999988            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHH-----hccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERF-----AGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~-----~~~~~~~~e~A  283 (339)
                      .++.+++.||++|+|.++|.+.||.|-. .+|+|.+++||.|||+|....      .|...+.+     .+++.+|...|
T Consensus       150 ~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a  228 (253)
T KOG1204|consen  150 RPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTA  228 (253)
T ss_pred             ccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHH
Confidence            5799999999999999999999999854 799999999999999986432      23322222     36789999999


Q ss_pred             HHHHHHhccCCCCCCCccee
Q 019551          284 DTVLWLALQPKEKLVSGSFY  303 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~  303 (339)
                      ..+..|+....  +.+|.+.
T Consensus       229 ~~l~~L~e~~~--f~sG~~v  246 (253)
T KOG1204|consen  229 KVLAKLLEKGD--FVSGQHV  246 (253)
T ss_pred             HHHHHHHHhcC--ccccccc
Confidence            99999985321  6677653

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=201.39  Aligned_cols=208  Identities=25%  Similarity=0.283  Sum_probs=168.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .|+++||||+++||+++++.|+++ ++|++++|+.++.++..++.      ..++++.+|++|.++++++++.+    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            478999999999999999999999 99999999987655443322      24778899999999998887754    47


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|++||++|......  ..+.+++.+.+++|+.+++.+++.+++.|+++  .+++|++||..+..            +.+
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~------------~~~  137 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLR------------ANP  137 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcC------------cCC
Confidence            999999999865433  25678899999999999999999999998765  57899999987763            345


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-HHHhccCCCHHHHHHHHHHHhccCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-ERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      +...|+.+|++++.+++.++.++... |++++|+||+++|++......... .....++.+++|+|+.+++++..+.
T Consensus       138 ~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        138 GWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence            67789999999999999999998766 999999999999986443221111 1123457899999999999997543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=4.1e-26  Score=214.21  Aligned_cols=197  Identities=17%  Similarity=0.163  Sum_probs=152.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++||+++||||+||||+++|++|+++|++|++++|+++++++..+   ..  ...+..+.+|++|.+++.+.+      
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~--~~~v~~v~~Dvsd~~~v~~~l------  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE--DLPVKTLHWQVGQEAALAELL------  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc--CCCeEEEEeeCCCHHHHHHHh------
Confidence            3578999999999999999999999999999999998776543221   11  124677889999998876643      


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC---CCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP---DARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       +++|++|||||+... ...+.+++++.+++|+.|++.++++++|.|++++.   ++.+|++|+ +..            
T Consensus       244 -~~IDiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~------------  308 (406)
T PRK07424        244 -EKVDILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV------------  308 (406)
T ss_pred             -CCCCEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc------------
Confidence             479999999998653 34677899999999999999999999999987632   245666665 322            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                       ..+....|++||+|+.+++. ++.+.  .++.|..+.||+++|++..           ....+||++|+.+++++..+.
T Consensus       309 -~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        309 -NPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             -cCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------CCCCCHHHHHHHHHHHHHCCC
Confidence             12345689999999999984 44443  4677778899999998632           124699999999999997544


Q ss_pred             C
Q 019551          295 E  295 (339)
Q Consensus       295 ~  295 (339)
                      .
T Consensus       374 ~  374 (406)
T PRK07424        374 R  374 (406)
T ss_pred             C
Confidence            3

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=9.5e-24  Score=232.04  Aligned_cols=181  Identities=17%  Similarity=0.185  Sum_probs=151.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCch------------------------------------------
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKE------------------------------------------   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~------------------------------------------   96 (339)
                      +|+++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhh
Q 019551           97 -----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVN  169 (339)
Q Consensus        97 -----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN  169 (339)
                           +..+..+++.+.  +.++.++.||++|.++++++++++.+. ++||+||||||+.....  ..+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 111112222222  347889999999999999999999877 68999999999876554  36889999999999


Q ss_pred             hhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEE
Q 019551          170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFY  249 (339)
Q Consensus       170 ~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~  249 (339)
                      +.|++.+++++.+.+     .++||++||..+..            +.+++..|+++|++++.+++.++.++.  +++|+
T Consensus      2153 v~G~~~Ll~al~~~~-----~~~IV~~SSvag~~------------G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~ 2213 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN-----IKLLALFSSAAGFY------------GNTGQSDYAMSNDILNKAALQLKALNP--SAKVM 2213 (2582)
T ss_pred             HHHHHHHHHHHHHhC-----CCeEEEEechhhcC------------CCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEE
Confidence            999999999886653     35799999998873            457888999999999999999999874  59999


Q ss_pred             EeeCCcccCCCcc
Q 019551          250 SMHPGWAETPGVA  262 (339)
Q Consensus       250 ~v~PG~v~T~~~~  262 (339)
                      +|+||+++|+|..
T Consensus      2214 sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2214 SFNWGPWDGGMVN 2226 (2582)
T ss_pred             EEECCeecCCccc
Confidence            9999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=1.8e-24  Score=183.21  Aligned_cols=229  Identities=23%  Similarity=0.359  Sum_probs=186.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG-----ATVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G-----~~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      .|+++|||++||||.+++++|.+..     .+|++++|+.++.+++++.+.+.+|  ..++.++.+|++|..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5899999999999999999999763     3588999999999999999999988  45788999999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCC-----------------------------CCCChhhhhhhhhhhhhHHHHHHHHHHHHH
Q 019551          134 FSLKNKPVHVLVNNAGVLENN-----------------------------RLITSEGFELNFAVNVLGTYTITESMVPLL  184 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~-----------------------------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m  184 (339)
                      ++++|.++|.+..|||++...                             ...+.+++..+|++|++|+|.+.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            999999999999999976421                             014678899999999999999999999999


Q ss_pred             HhhCCCCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc
Q 019551          185 EKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS  264 (339)
Q Consensus       185 ~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  264 (339)
                      ..+ +...+|.+||..+....++-.+.   ....+..+|..||.+..-|.-++-+.+.+.|+.-++++||..-|.+....
T Consensus       163 ~~~-~~~~lvwtSS~~a~kk~lsleD~---q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~  238 (341)
T KOG1478|consen  163 CHS-DNPQLVWTSSRMARKKNLSLEDF---QHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEY  238 (341)
T ss_pred             hcC-CCCeEEEEeecccccccCCHHHH---hhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhh
Confidence            877 44599999998776443333222   23456678999999999999999999999999999999999999877655


Q ss_pred             chhHHHH----------Hh-ccC--CCHHHHHHHHHHHhccC
Q 019551          265 MPSFNER----------FA-GNL--RTSEEGADTVLWLALQP  293 (339)
Q Consensus       265 ~~~~~~~----------~~-~~~--~~~~e~A~~v~~l~s~~  293 (339)
                      .+.+.-.          +. .++  .+|-..|.+.+|+....
T Consensus       239 l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l~~  280 (341)
T KOG1478|consen  239 LNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTLAN  280 (341)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhhcC
Confidence            4332111          11 222  35667888999987543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=7.2e-23  Score=196.85  Aligned_cols=208  Identities=19%  Similarity=0.217  Sum_probs=156.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc----C---CccEEEEeccCCCHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT----G---NENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~----~---~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      ..||+++||||+||||++++++|+++|++|++++|+.++++...+++.+..    +   ..++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            468999999999999999999999999999999999988877766554311    1   135889999999999886643


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                             +.+|+||||+|....    ...++...+++|+.|..++++++.+.     +.++||++||.++...       
T Consensus       158 -------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~-------  214 (576)
T PLN03209        158 -------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV-------  214 (576)
T ss_pred             -------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc-------
Confidence                   479999999997542    12246778899999999999887543     4689999999876311       


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc----ch-hHHHHHhccCCCHHHHHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS----MP-SFNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~----~~-~~~~~~~~~~~~~~e~A~~v  286 (339)
                          +.+. ..|. +|.++..+.+.+..++...||+++.|+||++.|++....    .. .....+.++..+++|+|+.+
T Consensus       215 ----g~p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        215 ----GFPA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             ----Cccc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHH
Confidence                1111 1244 777888888888888888999999999999998754311    10 01112345678999999999


Q ss_pred             HHHhccCCC
Q 019551          287 LWLALQPKE  295 (339)
Q Consensus       287 ~~l~s~~~~  295 (339)
                      +++++++..
T Consensus       289 vfLasd~~a  297 (576)
T PLN03209        289 ACMAKNRRL  297 (576)
T ss_pred             HHHHcCchh
Confidence            999986553

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=3.2e-22  Score=184.84  Aligned_cols=200  Identities=16%  Similarity=0.125  Sum_probs=152.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++||++|||||+|+||++++++|+++|  ++|++++|+..+.....+++    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999986  78999999866543333222    22468889999999999888765    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         .+|+||||||.....  ......++.+++|+.|++++++++.+.     +.++||++||....              
T Consensus        74 ---~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~--------------  129 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA--------------  129 (324)
T ss_pred             ---cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC--------------
Confidence               589999999975421  122233568999999999999998652     45799999996533              


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH--------------hccCCCHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF--------------AGNLRTSEEG  282 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~--------------~~~~~~~~e~  282 (339)
                       .+...|++||++.+.++++++.+++..|+++++++||.+.+|.. ...+.+....              .+.+..++|+
T Consensus       130 -~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~  207 (324)
T TIGR03589       130 -NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQG  207 (324)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHH
Confidence             12457999999999999999988888999999999999998742 1112111111              1125679999


Q ss_pred             HHHHHHHhcc
Q 019551          283 ADTVLWLALQ  292 (339)
Q Consensus       283 A~~v~~l~s~  292 (339)
                      +++++.++..
T Consensus       208 a~a~~~al~~  217 (324)
T TIGR03589       208 VNFVLKSLER  217 (324)
T ss_pred             HHHHHHHHhh
Confidence            9999998853

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1.2e-21  Score=181.04  Aligned_cols=229  Identities=16%  Similarity=0.126  Sum_probs=160.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..++............++.++.+|++|.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999999877654432222111112468889999999999888775       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC---ccccc-cCC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT---DDLEF-NSG  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~---~~~~~-~~~  215 (339)
                      .+|+||||||....  ..+.+.+.+.+++|+.+++.+++++.+.+    ..++||++||.+++.....   ..... +..
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchhheecCCccCCCCCccCcCC
Confidence            58999999996532  23445678899999999999999987653    2468999999876643210   11011 111


Q ss_pred             CCc------chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHHHH-Hh---------ccC
Q 019551          216 SFD------GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFNER-FA---------GNL  276 (339)
Q Consensus       216 ~~~------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~-~~---------~~~  276 (339)
                      +..      ....|+.||.+.+.+++.++.+   .|+.++.++|+.+.+|......   ...... ..         +.+
T Consensus       151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~  227 (325)
T PLN02989        151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRF  227 (325)
T ss_pred             CCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCe
Confidence            111      1356999999999999888765   3799999999999998754311   111111 11         124


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ...+|+|++++.++..+.   .+|.|.++++
T Consensus       228 i~v~Dva~a~~~~l~~~~---~~~~~ni~~~  255 (325)
T PLN02989        228 VDVRDVALAHVKALETPS---ANGRYIIDGP  255 (325)
T ss_pred             eEHHHHHHHHHHHhcCcc---cCceEEEecC
Confidence            457999999999886432   2567777543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=2.6e-22  Score=168.11  Aligned_cols=173  Identities=23%  Similarity=0.302  Sum_probs=140.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHH---HHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETA---LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      |+++||||++|||.+++++|+++|+ .|++++|+++..+..   .+++.+.  +.++.++.+|++++++++++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 688888886554332   2344332  346888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|.+|||||......  ..+.++++..+++|+.+++.+++.+.+    . +.++++++||..+..            
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~ii~~ss~~~~~------------  141 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L-PLDFFVLFSSVAGVL------------  141 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C-CcceEEEEccHHHhc------------
Confidence            899999999999765432  357788999999999999999998732    2 458899999987653            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE  257 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~  257 (339)
                      +.++...|+++|+++..+++.++    +.|+++.++.||+++
T Consensus       142 ~~~~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      142 GNPGQANYAAANAFLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             CCCCchhhHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence            34567889999999999887764    458889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=9.6e-22  Score=180.16  Aligned_cols=245  Identities=17%  Similarity=0.072  Sum_probs=165.1

Q ss_pred             CCCEEEEEcCCCchHHH--HHHHHHHCCCEEEEEecCchhHH------------HHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           60 EGKNCVVTGANAGIGYA--TAEGLASRGATVYMVCRSKEKGE------------TALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a--~a~~l~~~G~~Vvl~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      .+|++|||||++|||.+  +|+.| +.|++|+++++..+..+            ...+.+. .. +..+..+.||+++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~-G~~a~~i~~DVss~E  116 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AA-GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hc-CCceEEEEcCCCCHH
Confidence            47999999999999999  89999 99999999886432222            2222332 22 345678899999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCC-----------------C-------------------CChhhhhhhhhhh
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNR-----------------L-------------------ITSEGFELNFAVN  169 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~-----------------~-------------------~~~~~~~~~~~vN  169 (339)
                      +++++++++.+.+|++|+||||+|......                 .                   .+.++++.+  ++
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~  194 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VK  194 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HH
Confidence            999999999999999999999999774321                 0                   112222222  34


Q ss_pred             hhHH---HHH--HHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch--HHHHHhHHHHHHHHHHHHHHHc
Q 019551          170 VLGT---YTI--TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM--EQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       170 ~~~~---~~l--~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                      ++|.   ...  .....+.|.   +++++|..|+.+...            ..|.+  ...+.+|++|++-++.|+.+|+
T Consensus       195 vMggedw~~Wi~al~~a~lla---~g~~~va~TY~G~~~------------t~p~Y~~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLA---EGAKTVAYSYIGPEL------------THPIYWDGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             hhccchHHHHHHHHHhccccc---CCcEEEEEecCCcce------------eecccCCchHHHHHHHHHHHHHHHHHHhh
Confidence            4444   222  344445553   568999999877652            34444  4789999999999999999999


Q ss_pred             CCCeEEEEeeCCcccCCCccCc--chhHHH---HHhccCCCHHHHHHHHHHHhccCCC-------CCCCcceeeCCCCCC
Q 019551          243 EKGIGFYSMHPGWAETPGVAKS--MPSFNE---RFAGNLRTSEEGADTVLWLALQPKE-------KLVSGSFYFDRAEAP  310 (339)
Q Consensus       243 ~~gI~v~~v~PG~v~T~~~~~~--~~~~~~---~~~~~~~~~~e~A~~v~~l~s~~~~-------~~~~G~~~~d~~~~~  310 (339)
                      +.|||+|++.+|.+.|......  ++....   ..++.-++-|.+-+.+..|..+.-.       .=..|.+.+|..|..
T Consensus       260 ~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~~g~he~~ieq~~rl~~~~ly~~~~~~~~d~~~r~r~d~~el~  339 (398)
T PRK13656        260 AKGGDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKEKGTHEGCIEQIYRLFSERLYRDGAIPEVDEEGRLRLDDWELR  339 (398)
T ss_pred             hcCCEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHhcCCCCChHHHHHHHHHHhcccCCCCCCcCCcCCcccchhhcC
Confidence            9999999999999999754322  222222   2233334445555555555542211       112456666766655


Q ss_pred             cccccccccCCHHHHHHHHHHH
Q 019551          311 KHLKFAATAASHARIDPIVDVL  332 (339)
Q Consensus       311 ~~~~~~~~~~~~~~~~~l~~~~  332 (339)
                      +        .-+++..+||+.+
T Consensus       340 ~--------~vq~~v~~~~~~~  353 (398)
T PRK13656        340 P--------DVQAAVRELWPQV  353 (398)
T ss_pred             H--------HHHHHHHHHHHHh
Confidence            4        4466677888764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.88  E-value=6e-21  Score=178.24  Aligned_cols=219  Identities=17%  Similarity=0.162  Sum_probs=157.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||++|||||+|+||.++++.|+++|++|++++|+.+........+. .  ..++.++.+|++|.+++.++++..    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-L--AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-h--cCCceEEEccCCCHHHHHHHHhhc----
Confidence            468999999999999999999999999999999998765443332221 1  235777899999999999988864    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       ++|+|||+||....  ..+.+++...+++|+.+++.+++++.+    .+..+++|++||...+..........+..+..
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        75 -KPEIVFHLAAQPLV--RKSYADPLETFETNVMGTVNLLEAIRA----IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             -CCCEEEECCccccc--ccchhCHHHHHHHhHHHHHHHHHHHHh----cCCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence             58999999995432  234566778899999999999998642    21246899999987664311000011112334


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcC----CCeEEEEeeCCcccCCCcc---CcchhHHHHHh-------------ccCCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKE----KGIGFYSMHPGWAETPGVA---KSMPSFNERFA-------------GNLRT  278 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~----~gI~v~~v~PG~v~T~~~~---~~~~~~~~~~~-------------~~~~~  278 (339)
                      +...|+.||++.+.+++.++.++.+    .|++++.++|+.+.+|...   ...+.......             ..+.-
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            5678999999999999999988755    4899999999999987531   11222222111             12445


Q ss_pred             HHHHHHHHHHHhc
Q 019551          279 SEEGADTVLWLAL  291 (339)
Q Consensus       279 ~~e~A~~v~~l~s  291 (339)
                      .+|++++++.++.
T Consensus       228 v~D~a~a~~~~~~  240 (349)
T TIGR02622       228 VLEPLSGYLLLAE  240 (349)
T ss_pred             HHHHHHHHHHHHH
Confidence            7899999988765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=1.5e-19  Score=166.98  Aligned_cols=229  Identities=17%  Similarity=0.121  Sum_probs=156.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      -.||+++||||+|+||.+++++|+++|++|+++.|+.++.+...+.........++.++.+|++|.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            35899999999999999999999999999999999877554332222111112468889999999999888776      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc-c-ccC-ccccccCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT-A-HLT-DDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~-~-~~~-~~~~~~~~  215 (339)
                       .+|++||+||.....   ..+...+.+++|+.|+..+++++...    .+..+||++||.+.+. . ... ........
T Consensus        77 -~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~  148 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPIEANDVVDET  148 (322)
T ss_pred             -CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccCCCCCCcCcc
Confidence             589999999974321   11233567899999999999876432    1346899999987542 1 110 00011110


Q ss_pred             --CC-----cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---chhHHHHH-h---------cc
Q 019551          216 --SF-----DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---MPSFNERF-A---------GN  275 (339)
Q Consensus       216 --~~-----~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---~~~~~~~~-~---------~~  275 (339)
                        ..     .....|+.||.+.+.+++.+..+   .|++++.++|+.+.+|.....   ........ .         ..
T Consensus       149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  225 (322)
T PLN02986        149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYR  225 (322)
T ss_pred             cCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcc
Confidence              00     12356999999999888887665   389999999999999864321   11111111 1         13


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +..++|+|++++.++..+.   .+|.|.+++.
T Consensus       226 ~v~v~Dva~a~~~al~~~~---~~~~yni~~~  254 (322)
T PLN02986        226 FVDVRDVALAHIKALETPS---ANGRYIIDGP  254 (322)
T ss_pred             eeEHHHHHHHHHHHhcCcc---cCCcEEEecC
Confidence            5679999999999986542   2467777543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.86  E-value=1e-19  Score=170.12  Aligned_cols=227  Identities=17%  Similarity=0.179  Sum_probs=155.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+|++|||||+|+||.+++++|+++|++|++++|+.+........+.......++.++.+|++|.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4689999999999999999999999999999999876655433222111111357889999999998887775       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC----
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG----  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~----  215 (339)
                      .+|++||+|+.....   ..+..+..+++|+.++..+++++.+..    ...+||++||.+.+.........+...    
T Consensus        77 ~~d~ViH~A~~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         77 GCTGVFHVATPMDFE---SKDPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCCEEEEeCCCCCCC---CCCchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            589999999864321   122335778999999999999886541    236899999986553211100000000    


Q ss_pred             ------CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHHH---H-----------hc
Q 019551          216 ------SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNER---F-----------AG  274 (339)
Q Consensus       216 ------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~---~-----------~~  274 (339)
                            ...+...|+.||.+.+.+++.++.+   +|++++.++|+.+.+|......+ .....   .           .+
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  226 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQG  226 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCc
Confidence                  1112347999999999999888776   58999999999999986433211 11100   0           12


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      .+...+|+|++++.++..+.   .+|.|+..+
T Consensus       227 ~~v~V~Dva~a~~~~l~~~~---~~~~~i~~~  255 (351)
T PLN02650        227 QFVHLDDLCNAHIFLFEHPA---AEGRYICSS  255 (351)
T ss_pred             ceeeHHHHHHHHHHHhcCcC---cCceEEecC
Confidence            45679999999999986432   235564443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.85  E-value=8.7e-20  Score=169.80  Aligned_cols=236  Identities=17%  Similarity=0.163  Sum_probs=156.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHh-h-cCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE-TALSAIRS-K-TGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~-~~~~~l~~-~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.. . ..+.++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            467899999999999999999999999999999998754311 11222211 0 01235889999999999999988864


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                           .+|+||||||.....  ...+..+..+++|+.|+..+++++.+.+.+++...++|++||...+.....  ...+.
T Consensus        83 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~--~~~E~  153 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP--PQSET  153 (340)
T ss_pred             -----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC--CCCCC
Confidence                 589999999975432  123445677899999999999999887643311237889998766643211  11112


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcC---CCeEEEEeeCCcccCCCccCcchhHHH---------HH------hccC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKE---KGIGFYSMHPGWAETPGVAKSMPSFNE---------RF------AGNL  276 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~---~gI~v~~v~PG~v~T~~~~~~~~~~~~---------~~------~~~~  276 (339)
                      .+..+...|+.||.+.+.+++.++.+++-   .++.+|.+.|+...+. ..........         .+      ...+
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  232 (340)
T PLN02653        154 TPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF-VTRKITRAVGRIKVGLQKKLFLGNLDASRDW  232 (340)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc-chhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence            23345678999999999999999888642   2344555666543321 1111110000         00      1234


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ...+|+|++++.++...    .+|.|.+..+
T Consensus       233 i~v~D~a~a~~~~~~~~----~~~~yni~~g  259 (340)
T PLN02653        233 GFAGDYVEAMWLMLQQE----KPDDYVVATE  259 (340)
T ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Confidence            57899999999988642    1355666433

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=3.6e-19  Score=162.54  Aligned_cols=225  Identities=15%  Similarity=0.063  Sum_probs=152.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK--GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.++  ..+...++...  +.++.++.+|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999996432  22222332211  2368888999999998876654     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc--cCcc-ccccC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH--LTDD-LEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~--~~~~-~~~~~  214 (339)
                        ..|.++|.++.....    ...+++.+++|+.|++.+++++.+.+    ..++||++||.++....  ...+ .....
T Consensus        78 --~~d~v~~~~~~~~~~----~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~SS~~a~~~~~~~~~~~~~~~E  147 (297)
T PLN02583         78 --GCSGLFCCFDPPSDY----PSYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTSSLTAVIWRDDNISTQKDVDE  147 (297)
T ss_pred             --CCCEEEEeCccCCcc----cccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEecchHheecccccCCCCCCCCc
Confidence              578888876543211    12467889999999999999987653    24799999998765311  1001 01111


Q ss_pred             CCC-cc------hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH--HH----hccCCCHHH
Q 019551          215 GSF-DG------MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE--RF----AGNLRTSEE  281 (339)
Q Consensus       215 ~~~-~~------~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~----~~~~~~~~e  281 (339)
                      ... +.      ...|+.||...+.++..++.+   .|+++++|+|++|.+|......+....  ..    ...+...+|
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~D  224 (297)
T PLN02583        148 RSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNF  224 (297)
T ss_pred             ccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHH
Confidence            111 11      126999999999988877654   489999999999999865322111000  00    113567899


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|++.+.++..+   ..+|.|++-+.
T Consensus       225 va~a~~~al~~~---~~~~r~~~~~~  247 (297)
T PLN02583        225 LVDAHIRAFEDV---SSYGRYLCFNH  247 (297)
T ss_pred             HHHHHHHHhcCc---ccCCcEEEecC
Confidence            999999998643   23567776444

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=1.4e-18  Score=162.51  Aligned_cols=217  Identities=21%  Similarity=0.142  Sum_probs=151.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      -+++++|||||+|+||.+++++|+++|++|++++|+.++.+.....+..   +.++.++.+|+++.+++.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence            3578999999999999999999999999999999987665544443321   2468889999999999887764      


Q ss_pred             CCccEEEEccccccCCC---CCChhhh--hhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc---cc
Q 019551          139 KPVHVLVNNAGVLENNR---LITSEGF--ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD---DL  210 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~---~~~~~~~--~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~---~~  210 (339)
                       .+|+|||+||......   ..+.+.+  ..++++|+.++..+++++.+..    ..+++|++||.+.+......   ..
T Consensus        79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEechhhccccccCCCCCC
Confidence             5899999999765432   1222222  3466778899999999876531    24689999998777532100   00


Q ss_pred             cccC---C-------CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----HHHh---
Q 019551          211 EFNS---G-------SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----ERFA---  273 (339)
Q Consensus       211 ~~~~---~-------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~~~~---  273 (339)
                      +...   .       ..+....|+.||.+.+.+++.++.++   |+++..++|+.|..|......+...    ....   
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~  230 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDS  230 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCc
Confidence            0100   0       11233479999999999998887654   7999999999999986532222111    1000   


Q ss_pred             ---------------ccCCCHHHHHHHHHHHhcc
Q 019551          274 ---------------GNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       274 ---------------~~~~~~~e~A~~v~~l~s~  292 (339)
                                     ..+...+|+|++++.++..
T Consensus       231 ~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        231 KLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                           1245789999999999853

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.6e-19  Score=150.61  Aligned_cols=142  Identities=18%  Similarity=0.221  Sum_probs=115.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|+++||||++|||+++|+.|++.|++|++++|+.+.+++..+++.+.  +.+..++.+|+++.++++++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988877777777643  23567889999999999999999998


Q ss_pred             CCCCccEEEEccccccCCCCC-C-hhhhhhhhhhhhhHHHHHHHHHHHHHHhhC------CCCEEEEEcCcccc
Q 019551          137 KNKPVHVLVNNAGVLENNRLI-T-SEGFELNFAVNVLGTYTITESMVPLLEKAA------PDARVITVSSGGMY  202 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~-~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~------~~~~Iv~vsS~~~~  202 (339)
                      .+|++|++|||||+....... . .++.++  .+|+.+++..++.+.+.|.+++      +.||+..|||.+..
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQENDSN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhHhh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            999999999999987644332 2 222233  6778888999999999988653      35888888887654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.83  E-value=2.4e-18  Score=160.18  Aligned_cols=221  Identities=18%  Similarity=0.168  Sum_probs=154.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH-HHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.... ..++..  ...++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            4678999999999999999999999999999999987653321 222221  12358888999999999888775     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccc-ccCcc-ccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA-HLTDD-LEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~-~~~~~-~~~~~~  215 (339)
                        .+|+|||+||...       ++++..+++|+.++..+++++...     +..+||++||.++... ..... ......
T Consensus        81 --~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~~~~~~~~~E~  146 (342)
T PLN02214         81 --GCDGVFHTASPVT-------DDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPNRDPEAVVDES  146 (342)
T ss_pred             --cCCEEEEecCCCC-------CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCCCCCCcccCcc
Confidence              5899999998642       345778999999999999987542     3468999999754322 11100 001111


Q ss_pred             -------CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----hhHHHHHh----------c
Q 019551          216 -------SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFNERFA----------G  274 (339)
Q Consensus       216 -------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~~~~~~~----------~  274 (339)
                             +......|+.||.+.+.+++.++.++   |+++..++|+.|..|......    ........          .
T Consensus       147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  223 (342)
T PLN02214        147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ  223 (342)
T ss_pred             cCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCc
Confidence                   11234579999999999998877663   899999999999998643211    11111111          1


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      .+...+|+|++++.++..+.   .+|.|++.+
T Consensus       224 ~~i~V~Dva~a~~~al~~~~---~~g~yn~~~  252 (342)
T PLN02214        224 AYVDVRDVALAHVLVYEAPS---ASGRYLLAE  252 (342)
T ss_pred             CeeEHHHHHHHHHHHHhCcc---cCCcEEEec
Confidence            34569999999999886432   356777643

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2.2e-18  Score=159.00  Aligned_cols=226  Identities=18%  Similarity=0.154  Sum_probs=152.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh-cCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK-TGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+...... .+... ....++.++.+|++|.+++..+++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            4789999999999999999999999999999999876533222 22211 112368899999999998887765      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc--cccccC-ccccccC-
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM--YTAHLT-DDLEFNS-  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~--~~~~~~-~~~~~~~-  214 (339)
                       .+|+|||+|+......   .+..+..+++|+.++..+++++....    +..++|++||.+.  +..... .+..... 
T Consensus        76 -~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~  147 (322)
T PLN02662         76 -GCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP----SVKRVVVTSSMAAVAYNGKPLTPDVVVDET  147 (322)
T ss_pred             -CCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC----CCCEEEEccCHHHhcCCCcCCCCCCcCCcc
Confidence             5899999998753211   11224778999999999999875421    3468999999764  221110 0001111 


Q ss_pred             CCC-c-----chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---chhHHHHH-h---------cc
Q 019551          215 GSF-D-----GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---MPSFNERF-A---------GN  275 (339)
Q Consensus       215 ~~~-~-----~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---~~~~~~~~-~---------~~  275 (339)
                      .+. +     ....|+.+|.+.+.+++.+..+   .|++++.++|+.+.+|.....   ........ .         ..
T Consensus       148 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (322)
T PLN02662        148 WFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYR  224 (322)
T ss_pred             cCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcC
Confidence            111 1     1247999999999888777654   489999999999999864321   11111111 1         13


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +..++|+|++++.++..+..   .|.|++.+
T Consensus       225 ~i~v~Dva~a~~~~~~~~~~---~~~~~~~g  252 (322)
T PLN02662        225 WVDVRDVANAHIQAFEIPSA---SGRYCLVE  252 (322)
T ss_pred             eEEHHHHHHHHHHHhcCcCc---CCcEEEeC
Confidence            56789999999998864322   45666643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.83  E-value=3.9e-19  Score=150.47  Aligned_cols=172  Identities=24%  Similarity=0.343  Sum_probs=131.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   .+.++..+++.+.  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            689999999999999999999986 899999993   3445667777665  4689999999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      ++++.+||+||.......  .+.++++.++...+.|...+.+.+.+     .+...+|..||..+..            +
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-----~~l~~~i~~SSis~~~------------G  142 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-----RPLDFFILFSSISSLL------------G  142 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-----TTTSEEEEEEEHHHHT------------T
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-----CCCCeEEEECChhHhc------------c
Confidence            999999999999875543  68899999999999999999887644     2567889999988873            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE  257 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~  257 (339)
                      .++...|+++.+.++.|++..+.    .|..+.+|+-|..+
T Consensus       143 ~~gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  143 GPGQSAYAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             CcchHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            67899999999999988876543    47778888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.83  E-value=2.4e-18  Score=160.05  Aligned_cols=216  Identities=15%  Similarity=0.157  Sum_probs=149.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+....... +.......++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            457899999999999999999999999999999988754332211 1111011257889999999998887765      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc---Cc----ccc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL---TD----DLE  211 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~---~~----~~~  211 (339)
                       .+|+|||+|+....   ...+.....+++|+.++..+++++.+.    .+.+++|++||.+.+....   ..    +..
T Consensus        80 -~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~  151 (338)
T PLN00198         80 -GCDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSAAAVSINKLSGTGLVMNEKN  151 (338)
T ss_pred             -cCCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecceeeeccCCCCCCceecccc
Confidence             58999999985321   122334567899999999999987543    1346999999987764311   00    000


Q ss_pred             c-----cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH----HH-----HH-----
Q 019551          212 F-----NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF----NE-----RF-----  272 (339)
Q Consensus       212 ~-----~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~-----~~-----  272 (339)
                      .     .....++...|+.||.+.+.+++.++.+   .|++++.++|+.|.+|......+..    ..     .+     
T Consensus       152 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PLN00198        152 WTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGL  228 (338)
T ss_pred             CCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccc
Confidence            0     0012234567999999999999888765   4899999999999998532211110    00     00     


Q ss_pred             --------hccCCCHHHHHHHHHHHhcc
Q 019551          273 --------AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       273 --------~~~~~~~~e~A~~v~~l~s~  292 (339)
                              ...+...+|++++++.++..
T Consensus       229 ~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        229 KGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccCCcceeEHHHHHHHHHHHhhC
Confidence                    01356799999999998864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.82  E-value=2.6e-18  Score=160.76  Aligned_cols=231  Identities=15%  Similarity=0.158  Sum_probs=155.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEE-EEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVY-MVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vv-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |++|||||+|+||+++++.|.++|++++ +++|..+. ... ..+.......++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998755 45554321 111 11111111235778899999999998888752     6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHh---h-CCCCEEEEEcCccccccccCccc-cccCC
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEK---A-APDARVITVSSGGMYTAHLTDDL-EFNSG  215 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~---~-~~~~~Iv~vsS~~~~~~~~~~~~-~~~~~  215 (339)
                      +|+|||+||....  ..+.+.++..+++|+.+++.+++++.+.|..   . .+..++|++||.+.+........ ..+..
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~  152 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETT  152 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCC
Confidence            9999999997542  2234567889999999999999999876421   1 12358999999876642111111 11122


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHH-H-------------hccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNER-F-------------AGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~-~-------------~~~~~~~  279 (339)
                      +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|....  ..+..... .             ...+...
T Consensus       153 ~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  229 (355)
T PRK10217        153 PYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYV  229 (355)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcH
Confidence            33456789999999999999987775   6888889999888875421  11111111 0             1235679


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|++++++.++...   ..++.|.+..+
T Consensus       230 ~D~a~a~~~~~~~~---~~~~~yni~~~  254 (355)
T PRK10217        230 EDHARALYCVATTG---KVGETYNIGGH  254 (355)
T ss_pred             HHHHHHHHHHHhcC---CCCCeEEeCCC
Confidence            99999998887532   23455666433

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=2.7e-18  Score=160.04  Aligned_cols=230  Identities=17%  Similarity=0.176  Sum_probs=147.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhh---cCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE-TALSAIRSK---TGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~-~~~~~l~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      |++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.+.   ..+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            68999999999999999999999999999999864211 111111110   01235889999999999999888864   


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        ++|+|||+|+......  ..+.....+++|+.|+..+++++.+.-.+  +..++|++||...++..... ...+..+.
T Consensus        78 --~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vyg~~~~~-~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELYGKVQEI-PQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccccch--hhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhhCCCCCC-CCCCCCCC
Confidence              5899999999765322  22233566789999999999988653100  12479999998776532111 11112334


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCC---CeEEEEeeCCcccCCCccCcchhHHHH---------H------hccCCCH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEK---GIGFYSMHPGWAETPGVAKSMPSFNER---------F------AGNLRTS  279 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~---gI~v~~v~PG~v~T~~~~~~~~~~~~~---------~------~~~~~~~  279 (339)
                      .+...|+.||.+.+.+++.++.++.-.   ++.+|...|+.-.+ ............         +      ...+...
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V  229 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHA  229 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchHHHHHHHHHHcCCCCceeeCCCccccCceeH
Confidence            456789999999999999998876321   22334444542211 111111111100         0      1234578


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +|+|++++.++..+.    .|.|.+-.
T Consensus       230 ~D~a~a~~~~~~~~~----~~~yni~~  252 (343)
T TIGR01472       230 KDYVEAMWLMLQQDK----PDDYVIAT  252 (343)
T ss_pred             HHHHHHHHHHHhcCC----CccEEecC
Confidence            999999998875321    35676633

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=6.9e-18  Score=151.32  Aligned_cols=225  Identities=22%  Similarity=0.219  Sum_probs=162.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH--HHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA--LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++|+||||||.||..++++|+++||.|..+.|++++.++.  ..++...  ..+...+..|+.|++++..+++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            578999999999999999999999999999999999884432  3333322  3468999999999999999988     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhh-hhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc---cCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFE-LNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH---LTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~-~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~---~~~~~~~~  213 (339)
                        ..|+|+|.|.......    ++.+ +.++.++.|+.++++++...    ..-.|||++||.++...+   .......+
T Consensus        78 --gcdgVfH~Asp~~~~~----~~~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDL----EDPEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             --CCCEEEEeCccCCCCC----CCcHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHHhccCCcCCCCCcccc
Confidence              6999999997665432    1133 67899999999999987543    135799999999887643   22222222


Q ss_pred             CCCCc-------chHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCccCcchhH----HHHHh--------
Q 019551          214 SGSFD-------GMEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGVAKSMPSF----NERFA--------  273 (339)
Q Consensus       214 ~~~~~-------~~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~----~~~~~--------  273 (339)
                      ...+.       ....|+.||.    +++..|-++++ .|+...+|+||.|-.|.........    .+.+.        
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~----lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n  223 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKT----LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPN  223 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHH----HHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCC
Confidence            22221       1136888887    44444555553 4699999999999999877633221    11111        


Q ss_pred             --ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 --GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 --~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                        ..+...+|+|.+-+++...+..   +|+|++.+..
T Consensus       224 ~~~~~VdVrDVA~AHv~a~E~~~a---~GRyic~~~~  257 (327)
T KOG1502|consen  224 FWLAFVDVRDVALAHVLALEKPSA---KGRYICVGEV  257 (327)
T ss_pred             CceeeEeHHHHHHHHHHHHcCccc---CceEEEecCc
Confidence              1256899999999999976554   5999886654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.81  E-value=7.3e-18  Score=159.11  Aligned_cols=224  Identities=17%  Similarity=0.203  Sum_probs=179.8

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ...++||++|||||+|.||.++++++++.+. ++++.+|++-++-....++.+.++..+..++.+|+.|.+.++++++..
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            3457999999999999999999999999987 699999999999999999999888888999999999999999999864


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                           ++|+++|.|+.=+-  +.-+....+.+.+|++|+.++++++...     +-.++|.+|+.-+.            
T Consensus       325 -----kvd~VfHAAA~KHV--Pl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV------------  380 (588)
T COG1086         325 -----KVDIVFHAAALKHV--PLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAV------------  380 (588)
T ss_pred             -----CCceEEEhhhhccC--cchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCccc------------
Confidence                 79999999986442  2334556788999999999999998654     56789999997665            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-------------hccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-------------AGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-------------~~~~~~~~e  281 (339)
                         .+...|++||...+.++.+++......+-++.+|.-|.|-..- ..-.|-+.+..             .+.+.+.+|
T Consensus       381 ---~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~E  456 (588)
T COG1086         381 ---NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPE  456 (588)
T ss_pred             ---CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHHHHHcCCCccccCCCceeEEEEHHH
Confidence               3356899999999999999988776667899999999997631 22233333332             345778999


Q ss_pred             HHHHHHHHhccCCCCCCCccee-eCCCCCCc
Q 019551          282 GADTVLWLALQPKEKLVSGSFY-FDRAEAPK  311 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~-~d~~~~~~  311 (339)
                      .++.|+.....    ..+|..| .|.|++-+
T Consensus       457 Av~LVlqA~a~----~~gGeifvldMGepvk  483 (588)
T COG1086         457 AVQLVLQAGAI----AKGGEIFVLDMGEPVK  483 (588)
T ss_pred             HHHHHHHHHhh----cCCCcEEEEcCCCCeE
Confidence            99999988642    2355554 58877543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=1.5e-17  Score=159.70  Aligned_cols=192  Identities=17%  Similarity=0.155  Sum_probs=136.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch---h----H---------HHHHHHHHhhcCCccEEEEecc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE---K----G---------ETALSAIRSKTGNENVHLELCD  120 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~D  120 (339)
                      .++++|++|||||+|+||++++++|+++|++|++++|...   .    .         .+..+.+... .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECC
Confidence            4578899999999999999999999999999999874321   1    0         0011111111 12358899999


Q ss_pred             CCCHHHHHHHHHHHhcCCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       121 l~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ++|.+++.++++..     ++|+|||+|+...... ..+.++++..+++|+.|++++++++...    +...++|++||.
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS~  192 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGTM  192 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEecc
Confidence            99999999988863     6999999997643221 2344556778899999999999987543    112489999998


Q ss_pred             cccccccCc-c-ccc-------cC---CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          200 GMYTAHLTD-D-LEF-------NS---GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       200 ~~~~~~~~~-~-~~~-------~~---~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                      ..++..... + ...       ..   .+..+...|+.||.+.+.+++.++..   .|+.+..+.|+.+..|..
T Consensus       193 ~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        193 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             eecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            877532110 0 000       00   12233567999999999988877665   589999999999998863

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=2.6e-17  Score=153.74  Aligned_cols=185  Identities=17%  Similarity=0.155  Sum_probs=131.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++|+++||||+|+||.+++++|+++|++|++++|......+..+++....  ...++.++.+|++|.+++.++++..  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            678999999999999999999999999999999876443322222222211  1235788999999999998887753  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         .+|+|||+||.....  .+.+.++..+++|+.++..+++++.    +. +..++|++||.+.+.... .....+..+
T Consensus        81 ---~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~vyg~~~-~~~~~E~~~  149 (352)
T PLN02240         81 ---RFDAVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMA----KH-GCKKLVFSSSATVYGQPE-EVPCTEEFP  149 (352)
T ss_pred             ---CCCEEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEccHHHhCCCC-CCCCCCCCC
Confidence               799999999975422  2335677889999999999988652    22 346899999976553211 111112233


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET  258 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T  258 (339)
                      ..+...|+.||.+.+.+++.++.+  ..++.+..+.|+.+..
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G  189 (352)
T PLN02240        150 LSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVG  189 (352)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCC
Confidence            445678999999999999988765  2367777777655543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.79  E-value=2.5e-17  Score=153.78  Aligned_cols=229  Identities=13%  Similarity=0.052  Sum_probs=154.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC---CccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG---NENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++|+++||||+|.||.+++++|.++|++|++++|...........+....+   ..++.++.+|+.|.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            6789999999999999999999999999999999865432222222211111   1357889999999988877765   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          .+|+|||.|+......  ..++....+++|+.|+..+++++..    . +-.++|++||.+.+........ .+..
T Consensus        90 ----~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~----~-~~~~~v~~SS~~vyg~~~~~~~-~e~~  157 (348)
T PRK15181         90 ----NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARD----A-HVSSFTYAASSSTYGDHPDLPK-IEER  157 (348)
T ss_pred             ----CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeechHhhCCCCCCCC-CCCC
Confidence                4899999999754221  2233456789999999999987632    2 3468999999877653211111 1112


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------cchhHHHHHh--------------cc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SMPSFNERFA--------------GN  275 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------~~~~~~~~~~--------------~~  275 (339)
                      ...+...|+.||.+.+.+.+.++.+   .|+++..+.|+.+..|....      ..+.......              +.
T Consensus       158 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd  234 (348)
T PRK15181        158 IGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRD  234 (348)
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEe
Confidence            2234468999999999988877655   48999999999999875321      1122221111              12


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      +...+|+|++++.++..+.....++.|.+-
T Consensus       235 ~i~v~D~a~a~~~~~~~~~~~~~~~~yni~  264 (348)
T PRK15181        235 FCYIENVIQANLLSATTNDLASKNKVYNVA  264 (348)
T ss_pred             eEEHHHHHHHHHHHHhcccccCCCCEEEec
Confidence            456899999998876432211234556663

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.79  E-value=1.2e-17  Score=148.84  Aligned_cols=205  Identities=18%  Similarity=0.191  Sum_probs=132.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      ..+++++||||+|+||++++++|+++|++|+++.|+.++......    .  +.++.++.+|+++. +++.+.   +.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~~~l~~~---~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGSDKLVEA---IG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCHHHHHHH---hh--
Confidence            457899999999999999999999999999999999876443221    1  23588899999983 333222   21  


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                       ..+|+||+|+|......      ....+++|+.++..+++++.    +. +.++||++||.+.+....         +.
T Consensus        84 -~~~d~vi~~~g~~~~~~------~~~~~~~n~~~~~~ll~a~~----~~-~~~~iV~iSS~~v~g~~~---------~~  142 (251)
T PLN00141         84 -DDSDAVICATGFRRSFD------PFAPWKVDNFGTVNLVEACR----KA-GVTRFILVSSILVNGAAM---------GQ  142 (251)
T ss_pred             -cCCCEEEECCCCCcCCC------CCCceeeehHHHHHHHHHHH----Hc-CCCEEEEEccccccCCCc---------cc
Confidence             26999999998643211      11235788889888888763    33 467999999987553210         11


Q ss_pred             cchHHHHHhHHHHHHH-HHHHHHH-HcCCCeEEEEeeCCcccCCCccCcchhH-HHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          218 DGMEQYARNKRVQVAL-TEKWSEM-YKEKGIGFYSMHPGWAETPGVAKSMPSF-NERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l-~~~la~e-~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      +....|...|.+...+ .+..+.+ +...|++++.|+||++.++......... .........+++|+|+.++.++..+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        143 ILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             ccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChh
Confidence            1123355545433322 2222222 4567999999999999876532211100 00111235799999999999987544


Q ss_pred             C
Q 019551          295 E  295 (339)
Q Consensus       295 ~  295 (339)
                      .
T Consensus       223 ~  223 (251)
T PLN00141        223 S  223 (251)
T ss_pred             h
Confidence            3

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.79  E-value=1.7e-17  Score=152.28  Aligned_cols=222  Identities=15%  Similarity=0.151  Sum_probs=150.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhH-HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKG-ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++||||+|+||.+++++|++.|  ++|++++|..... .+..+.+.   ...++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  7899888743211 11112221   1235788899999999999888753     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+|||+||.....  .+.+..+..+++|+.++..+++++...+    ...++|++||...+..........+..+..+
T Consensus        73 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        73 QPDAVVHFAAESHVD--RSISGPAAFIETNVVGTYTLLEAVRKYW----HEFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             CCCEEEEcccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhcC----CCceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            599999999976432  2334566789999999999998775542    2357999999766543211111111123334


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh--------------ccCCCHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA--------------GNLRTSEEGA  283 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~--------------~~~~~~~e~A  283 (339)
                      ...|+.+|++.+.+++.++.+.   ++++..+.|+.+..+....  ..+.......              ..+...+|+|
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC  223 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence            5689999999999999887764   7999999999998875321  1121111111              1234589999


Q ss_pred             HHHHHHhccCCCCCCCcceee
Q 019551          284 DTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      +.+..++...   ..++.|.+
T Consensus       224 ~~~~~~~~~~---~~~~~~~~  241 (317)
T TIGR01181       224 RAIYLVLEKG---RVGETYNI  241 (317)
T ss_pred             HHHHHHHcCC---CCCceEEe
Confidence            9999988532   22345655

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.79  E-value=5.7e-17  Score=152.30  Aligned_cols=232  Identities=14%  Similarity=0.103  Sum_probs=151.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc----CCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT----GNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ..++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.. +++....    ....+.++.+|++|.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            46789999999999999999999999999999999987655443 2222110    01257889999999999988876 


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc--ccccc-cCc-c
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG--MYTAH-LTD-D  209 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~--~~~~~-~~~-~  209 (339)
                            .+|.+||.|+.........  ......++|+.++..+++++...    .+-.++|++||..  .+... ... .
T Consensus       128 ------~~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~SS~~~~vyg~~~~~~~~  195 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRT----ESVRKCVFTSSLLACVWRQNYPHDLP  195 (367)
T ss_pred             ------hccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhc----CCccEEEEeccHHHhcccccCCCCCC
Confidence                  4789999998764332111  11344678999998888875321    1345899999964  22110 000 0


Q ss_pred             ccccC-------CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHHH------H---
Q 019551          210 LEFNS-------GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNER------F---  272 (339)
Q Consensus       210 ~~~~~-------~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~------~---  272 (339)
                      .....       .+..+...|+.||.+.+.+++.++.+   +|+++++++|+.|.+|......+. ....      +   
T Consensus       196 ~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~  272 (367)
T PLN02686        196 PVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLAD  272 (367)
T ss_pred             cccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCC
Confidence            00100       11223457999999999999887765   589999999999999964321111 1111      0   


Q ss_pred             -hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          273 -AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       273 -~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                       ...+...+|+|++++.++..+.....++.|+.++
T Consensus       273 g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g  307 (367)
T PLN02686        273 GLLATADVERLAEAHVCVYEAMGNKTAFGRYICFD  307 (367)
T ss_pred             CCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeC
Confidence             0125679999999998875321112345564444

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.77  E-value=4.9e-18  Score=150.91  Aligned_cols=214  Identities=19%  Similarity=0.228  Sum_probs=149.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccE----EEEeccCCCHHHHHHHHHHHhcCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENV----HLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ||||||+|.||.+++++|++.+. +|++++|++.++-...+++....++.++    ..+.+|+.|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999985 7999999999999999998766554444    34578999999999988764    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       ++|+++|.|+.=+..  .-++...+.+++|+.|+.++++++..+     +-.++|++|+.-+.               .
T Consensus        77 -~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv---------------~  133 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV---------------N  133 (293)
T ss_dssp             -T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS---------------S
T ss_pred             -CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC---------------C
Confidence             799999999864421  122456778999999999999988654     46789999997665               2


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-------------hccCCCHHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-------------AGNLRTSEEGADT  285 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-------------~~~~~~~~e~A~~  285 (339)
                      +...|++||...+.++.+.+...+..+.++.+|.-|.|-.. ...-.|.+.++.             .+.+.+++|.++.
T Consensus       134 PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS-~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~L  212 (293)
T PF02719_consen  134 PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGS-RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQL  212 (293)
T ss_dssp             --SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTG-TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecC-CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHH
Confidence            35689999999999999998887777899999999999752 122234444433             2457799999999


Q ss_pred             HHHHhccCCCCCCCccee-eCCCCC
Q 019551          286 VLWLALQPKEKLVSGSFY-FDRAEA  309 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~-~d~~~~  309 (339)
                      ++..+...    .+|.++ .|.|++
T Consensus       213 vl~a~~~~----~~geifvl~mg~~  233 (293)
T PF02719_consen  213 VLQAAALA----KGGEIFVLDMGEP  233 (293)
T ss_dssp             HHHHHHH------TTEEEEE---TC
T ss_pred             HHHHHhhC----CCCcEEEecCCCC
Confidence            99887532    245554 487654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.77  E-value=1.2e-16  Score=147.47  Aligned_cols=204  Identities=20%  Similarity=0.168  Sum_probs=143.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++||||+|+||..+++.|+++|++|++++|+++.....    .    ...+.++.+|++|.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            3689999999999999999999999999999987653211    1    2257789999999999888775       58


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC---c
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF---D  218 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~---~  218 (339)
                      |++||+|+....    ..+..+..+++|+.++..+++++..    . +.+++|++||...+..........+..+.   .
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALE----A-GVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            999999985421    2234677899999999999887653    2 35689999998776531111000111111   1


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hH-HHHHh----------ccCCCHHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SF-NERFA----------GNLRTSEEGADT  285 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~-~~~~~----------~~~~~~~e~A~~  285 (339)
                      ....|+.+|.+.+.+++.++.+   .|+++..++|+.+..+.......  .. .....          ..+...+|+|++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  213 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEG  213 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHH
Confidence            2457999999999999888665   48999999999998765322111  11 11000          123468999999


Q ss_pred             HHHHhcc
Q 019551          286 VLWLALQ  292 (339)
Q Consensus       286 v~~l~s~  292 (339)
                      ++.++..
T Consensus       214 ~~~~~~~  220 (328)
T TIGR03466       214 HLLALER  220 (328)
T ss_pred             HHHHHhC
Confidence            9888754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=2.4e-16  Score=146.39  Aligned_cols=181  Identities=15%  Similarity=0.124  Sum_probs=125.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|+||++++++|+++|++|++++|..+........+.+. ++.++.++.+|++|.+++.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            5899999999999999999999999999987543333322223222 233567788999999998887763     3699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC-cchH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF-DGME  221 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~-~~~~  221 (339)
                      +|||+||......  ..+.....+++|+.++..+++++.    +. +.+++|++||.+.+....... .-+..+. .+..
T Consensus        76 ~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~~yg~~~~~~-~~E~~~~~~p~~  147 (338)
T PRK10675         76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMR----AA-NVKNLIFSSSATVYGDQPKIP-YVESFPTGTPQS  147 (338)
T ss_pred             EEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEeccHHhhCCCCCCc-cccccCCCCCCC
Confidence            9999998764322  223345678999999999887643    33 456899999987654221100 0011111 2356


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      .|+.+|.+.+.+++.++.+.  .++++..+.|+.+.++
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~  183 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCC
Confidence            89999999999999987664  3567777776555543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.76  E-value=8.6e-17  Score=145.25  Aligned_cols=224  Identities=18%  Similarity=0.172  Sum_probs=152.0

Q ss_pred             EEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           65 VVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        65 lITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      |||||+|.||++++++|.++|  ++|.++++.+.....  ..+. .  -....++.+|++|.+++.++++       ..|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~-~--~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQ-K--SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhh-c--ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  789999987653221  1111 1  1123389999999999999887       689


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc---cC--CCC
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF---NS--GSF  217 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~---~~--~~~  217 (339)
                      ++||+|+......   ....+..+++|+.|+-++++++...     +-.++|++||.++.......++..   +.  .+.
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            9999999765433   3456778999999999999987542     568999999998876421111111   01  112


Q ss_pred             cchHHHHHhHHHHHHHHHHHHH-HHc-CCCeEEEEeeCCcccCCCccCcchhHHHHHh--------------ccCCCHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSE-MYK-EKGIGFYSMHPGWAETPGVAKSMPSFNERFA--------------GNLRTSEE  281 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~-e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~--------------~~~~~~~e  281 (339)
                      .....|+.||+..+.++..... ++. ...++..+|+|..|..|......+...+...              ..+...++
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHH
Confidence            2455899999998888766543 121 1258999999999999865444333222111              12455899


Q ss_pred             HHHHHHHHhc---cC--CCCCCCcceee-CCCC
Q 019551          282 GADTVLWLAL---QP--KEKLVSGSFYF-DRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s---~~--~~~~~~G~~~~-d~~~  308 (339)
                      +|++.+..+.   ++  .....+..|++ |+.+
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p  253 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDGEP  253 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECCCc
Confidence            9998876543   22  23344556666 5543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=1.6e-16  Score=148.47  Aligned_cols=226  Identities=16%  Similarity=0.172  Sum_probs=151.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGAT-VYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|||||+|+||.+++++|+++|++ |+.+++..  ...+.    +....+..++.++.+|++|.+++.+++++.     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCHHHHHHHHHhc-----
Confidence            5899999999999999999999986 55555532  11111    111112345778899999999999988752     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC----CCCEEEEEcCccccccccCcc------
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA----PDARVITVSSGGMYTAHLTDD------  209 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~----~~~~Iv~vsS~~~~~~~~~~~------  209 (339)
                      .+|+|||+||......  +.+..+..+++|+.|+..+++++.+.|....    +..++|++||...+......+      
T Consensus        73 ~~d~vih~A~~~~~~~--~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         73 QPDAVMHLAAESHVDR--SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             CCCEEEECCcccCCcc--hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            6999999999754321  2234567899999999999999988764321    235899999987664311000      


Q ss_pred             ---ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHH------------
Q 019551          210 ---LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERF------------  272 (339)
Q Consensus       210 ---~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~------------  272 (339)
                         ...+..+..+...|+.||.+.+.+++.++.++   |+++..+.|+.+..|....  ..+......            
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence               01112233455689999999999999988775   6777778888888775311  111111110            


Q ss_pred             --hccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          273 --AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       273 --~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                        ...+...+|+|++++.++..+   ..++.|.+-
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~  259 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEG---KAGETYNIG  259 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeC
Confidence              012456899999998887532   124566663

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.75  E-value=2.6e-16  Score=138.38  Aligned_cols=215  Identities=20%  Similarity=0.281  Sum_probs=155.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      ||||||+|.||.+++++|.++|+.|+.+.|+.........+.       ++.++.+|+.|.++++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-------NVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-------TEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-------eEEEEEeecccccccccccccc-----CceE
Confidence            699999999999999999999999998888776543322221       6889999999999999999876     7999


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY  223 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y  223 (339)
                      +||+||...  ...+.+.....++.|+.++..+++.+...     +..++|++||...+... ......+..+..+...|
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~-~~~~~~e~~~~~~~~~Y  140 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP-DGEPIDEDSPINPLSPY  140 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS-SSSSBETTSGCCHSSHH
T ss_pred             EEEeecccc--ccccccccccccccccccccccccccccc-----ccccccccccccccccc-ccccccccccccccccc
Confidence            999998764  11122556777888988888888876433     44799999997776543 11111122233456679


Q ss_pred             HHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC---cc-C-cchhHHHHHh--------------ccCCCHHHHHH
Q 019551          224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG---VA-K-SMPSFNERFA--------------GNLRTSEEGAD  284 (339)
Q Consensus       224 ~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~---~~-~-~~~~~~~~~~--------------~~~~~~~e~A~  284 (339)
                      +.+|...+.+.+.+..+.   ++++..+.|+.+..|.   .. . ..+.......              ..+...+|+|+
T Consensus       141 ~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  217 (236)
T PF01370_consen  141 GASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAE  217 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHH
T ss_pred             cccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHH
Confidence            999999999999887765   8999999999999987   11 1 1122222221              12456899999


Q ss_pred             HHHHHhccCCCCCCCccee
Q 019551          285 TVLWLALQPKEKLVSGSFY  303 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~  303 (339)
                      .+++++..+.  ..+|.|.
T Consensus       218 ~~~~~~~~~~--~~~~~yN  234 (236)
T PF01370_consen  218 AIVAALENPK--AAGGIYN  234 (236)
T ss_dssp             HHHHHHHHSC--TTTEEEE
T ss_pred             HHHHHHhCCC--CCCCEEE
Confidence            9999998655  3455544

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.75  E-value=3.8e-16  Score=143.95  Aligned_cols=180  Identities=17%  Similarity=0.178  Sum_probs=129.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|+||.+++++|.++|++|++++|...........+.+.   .++.++.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            4799999999999999999999999998876543322222222211   1577888999999999888764     4799


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++|||||......  ..+...+.+++|+.++..+++++.    +. +..++|++||...+...... ...+..+..+...
T Consensus        73 ~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~ss~~~~g~~~~~-~~~e~~~~~~~~~  144 (328)
T TIGR01179        73 AVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQ----QT-GVKKFIFSSSAAVYGEPSSI-PISEDSPLGPINP  144 (328)
T ss_pred             EEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHH----hc-CCCEEEEecchhhcCCCCCC-CccccCCCCCCCc
Confidence            9999999764322  234456678999999999988653    22 34689999987665322110 0111122334568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      |+.+|++.+.+++.++.+.  .++++..+.|+.+..+.
T Consensus       145 y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       145 YGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGAD  180 (328)
T ss_pred             hHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCC
Confidence            9999999999999987652  47999999998887763

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=2.2e-16  Score=137.72  Aligned_cols=225  Identities=14%  Similarity=0.139  Sum_probs=164.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|||||.|.||.++++.+.++.-  +|+.++.-.  ...+    .+......++..++++|++|.+.+.+++++.   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~----~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLE----NLADVEDSPRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHH----HHHhhhcCCCceEEeccccCHHHHHHHHHhc---
Confidence            4689999999999999999998754  577777521  1111    1222223468999999999999999998864   


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc-cccCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL-EFNSGS  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~-~~~~~~  216 (339)
                        .+|++||-|+-.+-..  +.++.+..+++|+.|++.|++++..+..    ..|.+.||....++.....++ .-+..+
T Consensus        74 --~~D~VvhfAAESHVDR--SI~~P~~Fi~TNv~GT~~LLEaar~~~~----~frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          74 --QPDAVVHFAAESHVDR--SIDGPAPFIQTNVVGTYTLLEAARKYWG----KFRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             --CCCeEEEechhccccc--cccChhhhhhcchHHHHHHHHHHHHhcc----cceEEEeccccccccccCCCCCcccCCC
Confidence              7999999998776443  3344556689999999999999877642    258999999888876544333 334577


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHH-HHh-------------ccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNE-RFA-------------GNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~-~~~-------------~~~~~~~  280 (339)
                      +.+.++|++|||+-..|++++.+.+   |+.+....+..-..|-.-.  ..|.... .+.             +.+.-.+
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeH
Confidence            8889999999999999999998875   7999999998888874322  2222211 111             2356689


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      |-+.++..++..   ...+..|.+.|+
T Consensus       223 Dh~~ai~~Vl~k---g~~GE~YNIgg~  246 (340)
T COG1088         223 DHCRAIDLVLTK---GKIGETYNIGGG  246 (340)
T ss_pred             hHHHHHHHHHhc---CcCCceEEeCCC
Confidence            999999988863   223556666665

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.72  E-value=2.7e-15  Score=140.08  Aligned_cols=220  Identities=13%  Similarity=0.156  Sum_probs=145.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC-CHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS-SITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~  139 (339)
                      ++++||||+|.||.+++++|+++ |++|++++|+.+....    +   .+...+.++.+|+. +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            46999999999999999999986 7999999987643221    1   12235888999998 6666655443       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC----
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG----  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~----  215 (339)
                      .+|+|||+|+...+..  ..++.+..+++|+.++..+++++.    +. + .++|++||...+..........+..    
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~----~~-~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAV----KY-G-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHH----hc-C-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            5899999999754322  123445678999999998888764    22 3 6899999987664321110000000    


Q ss_pred             -C-CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhHHHHH-----------
Q 019551          216 -S-FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSFNERF-----------  272 (339)
Q Consensus       216 -~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~-----------  272 (339)
                       + ..+...|+.||.+.+.+.+.++.+   .|+.+..+.|+.+..|....          ..+......           
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence             1 123457999999999988887654   47889999998887775321          011111111           


Q ss_pred             ---hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          273 ---AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       273 ---~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                         .+.+...+|+++.++.++..+.....++.|.+.+
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~  253 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGN  253 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCC
Confidence               1135678999999999886532212345566644

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.71  E-value=1.7e-15  Score=141.66  Aligned_cols=223  Identities=21%  Similarity=0.188  Sum_probs=142.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHH---HHHHHHHhhc------CCccEEEEeccCCCHH------
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGE---TALSAIRSKT------GNENVHLELCDLSSIT------  125 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~---~~~~~l~~~~------~~~~~~~~~~Dl~~~~------  125 (339)
                      +++||||||+||++++++|+++|  ++|+++.|+.+...   ...+.+....      ...++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  78999999876321   2222221110      0036889999998652      


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH  205 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~  205 (339)
                      ....+.       ..+|++||||+.....     ..++..+++|+.++..+++.+..    . +..+++++||.+.+...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~----~-~~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAAS----G-RAKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhh----C-CCceEEEEccccccCCc
Confidence            333322       3699999999976422     23566788999999988887643    2 34569999998776432


Q ss_pred             cCc----cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHH---
Q 019551          206 LTD----DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERF---  272 (339)
Q Consensus       206 ~~~----~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~---  272 (339)
                      ...    +.............|+.||.+.+.+.+.++.    .|++++.++||.+.++.....      ........   
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~  219 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL  219 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence            110    0100001112235799999999988876543    489999999999997622111      11111100   


Q ss_pred             ---------hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          273 ---------AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       273 ---------~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                               ...+...+++|++++.++..+.....++.|.+.+
T Consensus       220 ~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~  262 (367)
T TIGR01746       220 GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVN  262 (367)
T ss_pred             CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecC
Confidence                     0125668999999999986543212245566654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.71  E-value=2.9e-15  Score=141.82  Aligned_cols=215  Identities=13%  Similarity=0.126  Sum_probs=142.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+.++||||||+|.||..++++|+++ |++|++++|+.++............ ..++.++.+|++|.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh-----
Confidence            45578999999999999999999998 5899999988665432221100001 1368899999999998887765     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC----cccccc
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT----DDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~----~~~~~~  213 (339)
                        .+|+|||+|+........  ..-.+.+..|+.++..+++++.    +.  +.++|++||...+.....    .+.+..
T Consensus        86 --~~d~ViHlAa~~~~~~~~--~~~~~~~~~n~~gt~~ll~aa~----~~--~~r~v~~SS~~vYg~~~~~~~~e~~p~~  155 (386)
T PLN02427         86 --MADLTINLAAICTPADYN--TRPLDTIYSNFIDALPVVKYCS----EN--NKRLIHFSTCEVYGKTIGSFLPKDHPLR  155 (386)
T ss_pred             --cCCEEEEcccccChhhhh--hChHHHHHHHHHHHHHHHHHHH----hc--CCEEEEEeeeeeeCCCcCCCCCcccccc
Confidence              479999999976432211  1223446789999998888763    22  368999999876643210    000000


Q ss_pred             ----------C-CCC------cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC---------cchh
Q 019551          214 ----------S-GSF------DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK---------SMPS  267 (339)
Q Consensus       214 ----------~-~~~------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~---------~~~~  267 (339)
                                . .+.      .....|+.||.+.+.+++.++..   .|+.+..++|+.|..|....         ..+.
T Consensus       156 ~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~  232 (386)
T PLN02427        156 QDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR  232 (386)
T ss_pred             cccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccch
Confidence                      0 000      11246999999999888766543   58999999999999875321         1111


Q ss_pred             HH----HHHh--------------ccCCCHHHHHHHHHHHhcc
Q 019551          268 FN----ERFA--------------GNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       268 ~~----~~~~--------------~~~~~~~e~A~~v~~l~s~  292 (339)
                      ..    ....              ..+...+|+|++++.++..
T Consensus       233 ~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~  275 (386)
T PLN02427        233 VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN  275 (386)
T ss_pred             HHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence            11    1110              1256689999999988864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.68  E-value=6.4e-15  Score=148.48  Aligned_cols=224  Identities=14%  Similarity=0.145  Sum_probs=148.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHH-HHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITE-IKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~  136 (339)
                      ..+++||||||+|.||.+++++|+++ |++|++++|+.......       .+..++.++.+|++|..+ ++++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcHHHHHHHhc----
Confidence            45789999999999999999999986 79999999976532211       112368888999998665 344332    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC----ccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT----DDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~----~~~~~  212 (339)
                         .+|++||+||.......  .+..+..+++|+.++..+++++..    . + .++|++||...+.....    .+...
T Consensus       382 ---~~D~ViHlAa~~~~~~~--~~~~~~~~~~Nv~~t~~ll~a~~~----~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIEY--TRNPLRVFELDFEENLKIIRYCVK----Y-N-KRIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             ---CCCEEEECccccCchhh--ccCHHHHHHhhHHHHHHHHHHHHh----c-C-CeEEEEcchhhcCCCCCCCcCccccc
Confidence               58999999997654321  223455789999999999888753    2 2 68999999876653211    11000


Q ss_pred             c-CCCC-cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhHHHHH--------
Q 019551          213 N-SGSF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSFNERF--------  272 (339)
Q Consensus       213 ~-~~~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~--------  272 (339)
                      . ..+. .+...|+.||.+.+.+++.++.+   .|+++..+.|+.+..|....          ..+......        
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~  527 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence            0 0111 23357999999999999887665   47999999999999875321          011111111        


Q ss_pred             ------hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          273 ------AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       273 ------~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                            ...+...+|++++++.++..+.....++.|.+-++
T Consensus       528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~  568 (660)
T PRK08125        528 VDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNP  568 (660)
T ss_pred             eCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCC
Confidence                  01245689999999988764322122334555433

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.68  E-value=1.1e-14  Score=132.19  Aligned_cols=196  Identities=16%  Similarity=0.221  Sum_probs=136.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|.||.+++++|.++|++|++++|+                       .+|+.+.++++++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            37999999999999999999999999999985                       36999999998887753     589


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+||......  .....+..+++|+.++..+++++..    .  +.++|++||...+......+ ..+..+..+...
T Consensus        53 ~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~~~~~~-~~E~~~~~~~~~  123 (287)
T TIGR01214        53 AVVNTAAYTDVDG--AESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTDYVFDGEGKRP-YREDDATNPLNV  123 (287)
T ss_pred             EEEECCccccccc--cccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeeeeeecCCCCCC-CCCCCCCCCcch
Confidence            9999999754221  2233556789999999999988642    2  24899999977653311100 111112234568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHHHh------------ccCCCHHHHHHHHHHH
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNERFA------------GNLRTSEEGADTVLWL  289 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~------------~~~~~~~e~A~~v~~l  289 (339)
                      |+.+|.+.+.+++.+       +.++..++|+.+..+..... .........            ..+...+|+|++++.+
T Consensus       124 Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  196 (287)
T TIGR01214       124 YGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAAL  196 (287)
T ss_pred             hhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHH
Confidence            999999998877754       45789999999988753211 111111111            1234579999999999


Q ss_pred             hccCCCCCCCcceee
Q 019551          290 ALQPKEKLVSGSFYF  304 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~  304 (339)
                      +..+  ...+|.|.+
T Consensus       197 ~~~~--~~~~~~~ni  209 (287)
T TIGR01214       197 LQRL--ARARGVYHL  209 (287)
T ss_pred             Hhhc--cCCCCeEEE
Confidence            8643  124566766

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.67  E-value=6.2e-15  Score=139.45  Aligned_cols=208  Identities=13%  Similarity=0.104  Sum_probs=139.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET--ALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++++||||+|+||++++++|+++|++|++++|+.++...  ..+++...  ...+.++.+|++|.+++.++++..  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence            467899999999999999999999999999999998765431  11122112  135788999999999999888753  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                       .+++|+||||+|.....       ....+++|+.++..+++++.    +. +.+++|++||.+.+.             
T Consensus       134 -~~~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~-gv~r~V~iSS~~v~~-------------  187 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EV-GAKHFVLLSAICVQK-------------  187 (390)
T ss_pred             -CCCCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----Hc-CCCEEEEEeeccccC-------------
Confidence             12699999999853211       12345678888887777653    33 457899999986541             


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH--H--Hh--c-----cCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE--R--FA--G-----NLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~--~~--~-----~~~~~~e~A~~  285 (339)
                        +...|..+|...+...+.     ...|++...++|+.+..++... ......  .  +.  +     .+...+|+|..
T Consensus       188 --p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~-~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~  259 (390)
T PLN02657        188 --PLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQ-VEIVKDGGPYVMFGDGKLCACKPISEADLASF  259 (390)
T ss_pred             --cchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHH-HHhhccCCceEEecCCcccccCceeHHHHHHH
Confidence              234688889888776543     2468999999998876543210 000000  0  00  1     13567899999


Q ss_pred             HHHHhccCCCCCCCcceeeCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      ++.++.++..  .++.|.+.+
T Consensus       260 i~~~~~~~~~--~~~~~~Igg  278 (390)
T PLN02657        260 IADCVLDESK--INKVLPIGG  278 (390)
T ss_pred             HHHHHhCccc--cCCEEEcCC
Confidence            9988854322  244454543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.67  E-value=1.3e-14  Score=133.19  Aligned_cols=211  Identities=15%  Similarity=0.138  Sum_probs=136.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc--CCCCc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL--KNKPV  141 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~i  141 (339)
                      +|||||+|.||++++++|+++|++++++.|+.+..... .           .+..+|+.|..+.+.+++.+..  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999777766654332110 0           1123566666666555555432  34679


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+|||+||...... .   +-+..+++|+.++..+++++..    .  +.++|++||.+.+...... ...+..+..+..
T Consensus        70 d~Vih~A~~~~~~~-~---~~~~~~~~n~~~t~~ll~~~~~----~--~~~~i~~SS~~vyg~~~~~-~~~E~~~~~p~~  138 (308)
T PRK11150         70 EAIFHEGACSSTTE-W---DGKYMMDNNYQYSKELLHYCLE----R--EIPFLYASSAATYGGRTDD-FIEEREYEKPLN  138 (308)
T ss_pred             cEEEECceecCCcC-C---ChHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEcchHHhCcCCCC-CCccCCCCCCCC
Confidence            99999998654321 1   1234689999999888887642    2  2479999998876532111 111112233456


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cch----hHHHHHh---------------ccCCCHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMP----SFNERFA---------------GNLRTSE  280 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~----~~~~~~~---------------~~~~~~~  280 (339)
                      .|+.||.+.+.+++.++.+   .++++..+.|+.+..|....  ..+    .......               ..+...+
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~  215 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVG  215 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHH
Confidence            8999999999988877654   47899999999988875321  111    1111111               1235689


Q ss_pred             HHHHHHHHHhccCCCCCCCcceee
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      |+|++++.++...    .+|.|.+
T Consensus       216 D~a~a~~~~~~~~----~~~~yni  235 (308)
T PRK11150        216 DVAAVNLWFWENG----VSGIFNC  235 (308)
T ss_pred             HHHHHHHHHHhcC----CCCeEEc
Confidence            9999998887532    2466666

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=5e-15  Score=129.89  Aligned_cols=169  Identities=17%  Similarity=0.196  Sum_probs=129.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +++|||||+|-||.+++.+|++.|++|+++|.-...-.+.....       ...++..|+.|.+.+++++++.     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            36999999999999999999999999999997654433333221       1578999999999999999875     89


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |.+||.||...-++  +.+...+.++.|+.|++.|++++..    . .-..+||.||.+.++.+...+. .+..+..+..
T Consensus        69 daViHFAa~~~VgE--Sv~~Pl~Yy~NNv~gTl~Ll~am~~----~-gv~~~vFSStAavYG~p~~~PI-~E~~~~~p~N  140 (329)
T COG1087          69 DAVVHFAASISVGE--SVQNPLKYYDNNVVGTLNLIEAMLQ----T-GVKKFIFSSTAAVYGEPTTSPI-SETSPLAPIN  140 (329)
T ss_pred             CEEEECccccccch--hhhCHHHHHhhchHhHHHHHHHHHH----h-CCCEEEEecchhhcCCCCCccc-CCCCCCCCCC
Confidence            99999999766444  4566778899999999999987543    3 5678999998888765433222 2223445667


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHP  253 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~P  253 (339)
                      +|+.||.+.+.+.+.++...   +.++.+++-
T Consensus       141 PYG~sKlm~E~iL~d~~~a~---~~~~v~LRY  169 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN---PFKVVILRY  169 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC---CCcEEEEEe
Confidence            89999999999998887764   455555543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.65  E-value=1.6e-14  Score=146.11  Aligned_cols=227  Identities=15%  Similarity=0.110  Sum_probs=150.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR--GATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +++|+||||||+|.||++++++|.++  |++|++++|..  +....    +.......++.++.+|++|.+.+..++.. 
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHhh-
Confidence            45789999999999999999999998  68999998753  22211    11111124688999999999887765432 


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc--cc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL--EF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~--~~  212 (339)
                          ..+|+|||+|+......  ........+++|+.++..+++++..    .+...++|++||...+........  ..
T Consensus        79 ----~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             ----cCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccccCcc
Confidence                36999999999765322  1223346679999999999887632    212468999999877653211110  01


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh--------------ccC
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA--------------GNL  276 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~--------------~~~  276 (339)
                      +..+..+...|+.+|.+.+.+++.++.+   .++.+..+.|+.|..|....  ..+.+.....              ..+
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEee
Confidence            1122234457999999999999887665   47899999999998875321  1121111110              123


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      ...+|+|++++.++...   ..++.|.+.+
T Consensus       226 ihV~Dva~a~~~~l~~~---~~~~vyni~~  252 (668)
T PLN02260        226 LYCEDVAEAFEVVLHKG---EVGHVYNIGT  252 (668)
T ss_pred             EEHHHHHHHHHHHHhcC---CCCCEEEECC
Confidence            55899999999887532   2345666633

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=4.8e-14  Score=129.31  Aligned_cols=209  Identities=20%  Similarity=0.182  Sum_probs=145.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      .+|||||+|.||.+++++|.++|++|+.++|...+.....         ..+.++.+|+++.+.+.+.++..     . |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence            3899999999999999999999999999999876533221         25678889999986666555521     1 9


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC-CCCcchH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS-GSFDGME  221 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~-~~~~~~~  221 (339)
                      .+||+|+.......... .....+.+|+.++..+++++..     .+..++|+.||.+.+..........+. .+..+..
T Consensus        67 ~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~-----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          67 AVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA-----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH-----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            99999998764433222 4556889999999999998755     256789997776655433111111111 1222222


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----hHHHHHh---------------ccCCCHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----SFNERFA---------------GNLRTSEE  281 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~~~---------------~~~~~~~e  281 (339)
                      .|+.||.+.+.++.....   ..|+.+..+.|+.+..|......+     .......               ..+...+|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  217 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD  217 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence            799999999999988877   468999999999998876544311     1111010               01345899


Q ss_pred             HHHHHHHHhccCCC
Q 019551          282 GADTVLWLALQPKE  295 (339)
Q Consensus       282 ~A~~v~~l~s~~~~  295 (339)
                      +++++++++..+..
T Consensus       218 ~a~~~~~~~~~~~~  231 (314)
T COG0451         218 VADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999875443

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.64  E-value=4.6e-14  Score=129.64  Aligned_cols=216  Identities=13%  Similarity=0.070  Sum_probs=139.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +|||||+|.||.+++++|.++|+ .|++++|..... . ..++       ....+..|+.+.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-------~~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-------ADLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-------hheeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999998 688888764321 1 1111       112456788887776665542   345799


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+||....    +.++.+..+++|+.++..+++++..    .  +.++|++||.+.+.... ...........+...
T Consensus        69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~vy~~~~-~~~~e~~~~~~p~~~  137 (314)
T TIGR02197        69 AIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAATYGDGE-AGFREGRELERPLNV  137 (314)
T ss_pred             EEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHHhcCCCC-CCcccccCcCCCCCH
Confidence            99999996432    2345577889999999999987643    2  24799999987664321 111111111224568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--c----chhHHHHHh--------------------ccC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--S----MPSFNERFA--------------------GNL  276 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~----~~~~~~~~~--------------------~~~  276 (339)
                      |+.||.+.+.+++....+. ..++++..+.|+.+..|....  .    .........                    ..+
T Consensus       138 Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       138 YGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence            9999999999887643221 235788888998888765321  0    111111100                    124


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ...+|+++.++.++..    ..+|.|.+.++
T Consensus       217 i~v~D~a~~i~~~~~~----~~~~~yni~~~  243 (314)
T TIGR02197       217 VYVKDVVDVNLWLLEN----GVSGIFNLGTG  243 (314)
T ss_pred             EEHHHHHHHHHHHHhc----ccCceEEcCCC
Confidence            5689999999999864    23456666443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.63  E-value=5.1e-14  Score=135.05  Aligned_cols=216  Identities=17%  Similarity=0.160  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++++||||||+|.||+.++++|.++|++|++++|......+   .+.......++.++..|+.+..     +       .
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l-------~  182 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----L-------L  182 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----h-------c
Confidence            56899999999999999999999999999999875432211   1111122346788888987652     1       2


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc---cccc-cCC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD---DLEF-NSG  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~---~~~~-~~~  215 (339)
                      .+|+|||+|+...+...  ....+..+++|+.++..+++++..    .  +.++|++||...+......   +..+ ...
T Consensus       183 ~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gt~nLleaa~~----~--g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        183 EVDQIYHLACPASPVHY--KFNPVKTIKTNVVGTLNMLGLAKR----V--GARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             CCCEEEEeeeecchhhh--hcCHHHHHHHHHHHHHHHHHHHHH----h--CCEEEEECChHHhCCCCCCCCCccccccCC
Confidence            58999999987653221  123456789999999999987743    2  2489999998776432111   1100 011


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc----CcchhHHHHHh--------------ccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA----KSMPSFNERFA--------------GNLR  277 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~----~~~~~~~~~~~--------------~~~~  277 (339)
                      +......|+.+|.+.+.+++.+...   .|+++..+.|+.+..|...    ...+.......              ..+.
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi  331 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  331 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEE
Confidence            2333568999999999988877554   4789999999888877532    11111111110              1245


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      ..+|+|++++.++...    .+|.|.+-
T Consensus       332 ~V~Dva~ai~~a~e~~----~~g~yNIg  355 (442)
T PLN02206        332 FVSDLVEGLMRLMEGE----HVGPFNLG  355 (442)
T ss_pred             eHHHHHHHHHHHHhcC----CCceEEEc
Confidence            6899999999887532    24556553

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.61  E-value=1.5e-13  Score=131.67  Aligned_cols=216  Identities=17%  Similarity=0.162  Sum_probs=142.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +.++++||||+|.||..++++|.++|++|++++|...........+   .+..++.++..|+.+..     +       .
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-------~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-------L  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-------c
Confidence            3468999999999999999999999999999998643211111111   12235778888886542     1       2


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc---cccc-cCC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD---DLEF-NSG  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~---~~~~-~~~  215 (339)
                      .+|+|||+|+.......  ..+....+++|+.++..+++++...      +.++|++||.+.+......   +..+ ...
T Consensus       184 ~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        184 EVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             CCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            58999999987543221  1234577899999999998876432      2489999998777532111   1100 012


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----cchhHHHHH--------------hccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----SMPSFNERF--------------AGNLR  277 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----~~~~~~~~~--------------~~~~~  277 (339)
                      +......|+.+|.+.+.+++.++..   .|+++..+.|+.+..|....    ..+.+....              ...+.
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence            3334567999999999988877654   47899999999888875321    111111111              11245


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      ..+|+++++..++..+    .+|.|.+-
T Consensus       333 ~V~Dva~ai~~~~~~~----~~giyNIg  356 (436)
T PLN02166        333 YVSDLVDGLVALMEGE----HVGPFNLG  356 (436)
T ss_pred             EHHHHHHHHHHHHhcC----CCceEEeC
Confidence            6899999999887532    24666663

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.60  E-value=4.7e-14  Score=132.74  Aligned_cols=217  Identities=16%  Similarity=0.103  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||||+|.||+++++.|.++|++|++++|......      ...  .....++.+|++|.+.+..+++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCHHHHHHHHh-------
Confidence            5789999999999999999999999999999998653211      000  1124677899999888766654       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc--ccc-cC--
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD--LEF-NS--  214 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~--~~~-~~--  214 (339)
                      .+|+|||+|+........ .......+..|+.++..+++++..    . +..++|++||...+......+  ... +.  
T Consensus        85 ~~D~Vih~Aa~~~~~~~~-~~~~~~~~~~N~~~t~nll~aa~~----~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         85 GVDHVFNLAADMGGMGFI-QSNHSVIMYNNTMISFNMLEAARI----N-GVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             CCCEEEEcccccCCcccc-ccCchhhHHHHHHHHHHHHHHHHH----h-CCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence            589999999865432211 122344567899999998887642    2 346899999987664321110  011 11  


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC-----c-chhHHHHHh---------------
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK-----S-MPSFNERFA---------------  273 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~-----~-~~~~~~~~~---------------  273 (339)
                      .+..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..|....     . .+.+.....               
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~  235 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQT  235 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeE
Confidence            13345668999999999998887654   48999999999999885321     1 111111110               


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCCCCCcceee
Q 019551          274 GNLRTSEEGADTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      ..+...+|+++.+++++..+    .++.|.+
T Consensus       236 r~~i~v~D~a~ai~~~~~~~----~~~~~nv  262 (370)
T PLN02695        236 RSFTFIDECVEGVLRLTKSD----FREPVNI  262 (370)
T ss_pred             EeEEeHHHHHHHHHHHHhcc----CCCceEe
Confidence            12456899999999987542    2355555

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.60  E-value=1.4e-13  Score=125.88  Aligned_cols=192  Identities=16%  Similarity=0.155  Sum_probs=130.7

Q ss_pred             EEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEE
Q 019551           65 VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVL  144 (339)
Q Consensus        65 lITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l  144 (339)
                      |||||+|.||..+++.|.+.|++|+++.+..                      .+|+++.++++++++..     .+|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhcc-----CCCEE
Confidence            6999999999999999999999887664321                      37999999988877652     58999


Q ss_pred             EEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc---cccCCCC-cch
Q 019551          145 VNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL---EFNSGSF-DGM  220 (339)
Q Consensus       145 InnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~---~~~~~~~-~~~  220 (339)
                      ||+|+...... ...+..+..+++|+.++..+++++...     +..++|++||...+......+.   .....+. |..
T Consensus        54 ih~A~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         54 ILAAAKVGGIH-ANMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             EEeeeeecccc-hhhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99999754211 111234456889999999988877432     3468999999876643211000   0000111 223


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------cchhHHHH------------H-------hcc
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SMPSFNER------------F-------AGN  275 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------~~~~~~~~------------~-------~~~  275 (339)
                      ..|+.||.+.+.+.+.+..+.   ++++..+.|+.+..|....      ..+.....            .       ...
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            359999999998888776553   7999999999998875321      11111110            0       113


Q ss_pred             CCCHHHHHHHHHHHhcc
Q 019551          276 LRTSEEGADTVLWLALQ  292 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~  292 (339)
                      +...+|+++.+++++..
T Consensus       205 ~i~v~Dv~~~~~~~~~~  221 (306)
T PLN02725        205 FLHVDDLADAVVFLMRR  221 (306)
T ss_pred             cccHHHHHHHHHHHHhc
Confidence            56789999999999864

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.60  E-value=1.1e-13  Score=126.47  Aligned_cols=157  Identities=13%  Similarity=0.143  Sum_probs=113.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|.||++++++|.++| +|+.++|...                   .+..|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7988887531                   2347999999998887753     689


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +|||+|+......  ..++.+..+.+|+.++..+++++...      +.++|++||...+......+ ..+..+..+...
T Consensus        57 ~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~~~~~p-~~E~~~~~P~~~  127 (299)
T PRK09987         57 VIVNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPGTGDIP-WQETDATAPLNV  127 (299)
T ss_pred             EEEECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECCCCCCC-cCCCCCCCCCCH
Confidence            9999999765322  22334566789999999998876432      35899999987664321111 111123344568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      |+.||.+.+.+++.+..       +...++|+++..|.
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            99999999888765422       34777888888764

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.58  E-value=1.9e-13  Score=126.03  Aligned_cols=195  Identities=14%  Similarity=0.077  Sum_probs=129.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||||.||++++++|.++|++|++++|+.++...    +.    ...+.++.+|++|++++.++++       .+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            69999999999999999999999999999998754321    11    1257889999999999887765       589


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+++...       .+.....++|+.++..+.+++..    . +-.++|++||.+...              .+...
T Consensus        67 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~----~-gvkr~I~~Ss~~~~~--------------~~~~~  120 (317)
T CHL00194         67 AIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKA----A-KIKRFIFFSILNAEQ--------------YPYIP  120 (317)
T ss_pred             EEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHH----c-CCCEEEEeccccccc--------------cCCCh
Confidence            9999876432       12234567888888888776632    2 456899999864321              11235


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHHH--------hccCCCHHHHHHHHHHHhccC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNERF--------AGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~--------~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      |..+|...+.+.+       ..|+.+..+.|+.+..++.... .+.....+        ...+...+|+|+.++.++..+
T Consensus       121 ~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  193 (317)
T CHL00194        121 LMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLP  193 (317)
T ss_pred             HHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCc
Confidence            7788887766543       3578999999986543321111 01000000        012345799999999988643


Q ss_pred             CCCCCCcceeeCCC
Q 019551          294 KEKLVSGSFYFDRA  307 (339)
Q Consensus       294 ~~~~~~G~~~~d~~  307 (339)
                      .  ..++.|.+-++
T Consensus       194 ~--~~~~~~ni~g~  205 (317)
T CHL00194        194 E--TKNKTFPLVGP  205 (317)
T ss_pred             c--ccCcEEEecCC
Confidence            3  23455555444

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.58  E-value=5.7e-14  Score=124.46  Aligned_cols=170  Identities=19%  Similarity=0.237  Sum_probs=128.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++||||||+|-||.+++.+|.++|+.|+++|.-..........+++..+ ...+.++..|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57999999999999999999999999999998644433333444443332 357999999999999999999976     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|.|+|-|+......  +.+......+.|+.|++.++...    ++. +-..+|+.||...++.+...+...+.....+
T Consensus        77 ~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~----~~~-~~~~~V~sssatvYG~p~~ip~te~~~t~~p  149 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVM----KAH-NVKALVFSSSATVYGLPTKVPITEEDPTDQP  149 (343)
T ss_pred             CCceEEeehhhhccch--hhhCchhheehhhhhHHHHHHHH----HHc-CCceEEEecceeeecCcceeeccCcCCCCCC
Confidence            6999999999766444  23444777899999999998864    444 3678999999888865433222222222226


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHc
Q 019551          220 MEQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                      ...|+.+|.+++...+.+..-+.
T Consensus       150 ~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  150 TNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCcchhhhHHHHHHHHhhhcccc
Confidence            77899999999999998877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.51  E-value=7.8e-13  Score=111.85  Aligned_cols=180  Identities=23%  Similarity=0.289  Sum_probs=127.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      |+|+||||.+|+.++++|.++|++|+++.|++++.++          ..+++++.+|+.|++++.+.+.       +.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999987665          3479999999999998888776       6899


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY  223 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y  223 (339)
                      +|+++|....       +            ...++.++..+++. +..++|++||.+.+......   ......+.+..|
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~---~~~~~~~~~~~~  120 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGL---FSDEDKPIFPEY  120 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSE---EEGGTCGGGHHH
T ss_pred             hhhhhhhhcc-------c------------cccccccccccccc-ccccceeeeccccCCCCCcc---cccccccchhhh
Confidence            9999975543       1            44556666667666 56799999998866421110   000112233567


Q ss_pred             HHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       224 ~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      ...|...+.+.       ...+++...++||++..+.....  ... .........+.+|+|..++.++.
T Consensus       121 ~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  121 ARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE-GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS-TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec-cCCCCcCcCCHHHHHHHHHHHhC
Confidence            77776555443       23589999999999988753311  001 00111245679999999998874

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.9e-12  Score=128.64  Aligned_cols=174  Identities=22%  Similarity=0.155  Sum_probs=116.6

Q ss_pred             EEEEEcCCCchHHHHHHHHH--HCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHH--HHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLA--SRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEI--KSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~--~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v--~~~~~~~~~~~  138 (339)
                      ++|||||||.||.+++++|+  +.|++|++++|+... .. .+.+....+..++.++.+|++|++..  ....+.+    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589999999997532 11 22222222224688999999985310  1111222    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc--cccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD--DLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~--~~~~~~~~  216 (339)
                      ..+|++||+||.....     ...+...++|+.++..+++++..    . +..++|++||...+......  +.... .+
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~~SS~~v~g~~~~~~~e~~~~-~~  144 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAER----L-QAATFHHVSSIAVAGDYEGVFREDDFD-EG  144 (657)
T ss_pred             cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHh----c-CCCeEEEEeccccccCccCccccccch-hh
Confidence            3799999999975422     12355678999999888877532    2 45789999998766422110  00000 11


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      ......|+.||.+.+.+.+.      ..|+++..+.|+.+..+
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            12235699999999987753      25899999999999875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.50  E-value=5.4e-13  Score=121.06  Aligned_cols=202  Identities=19%  Similarity=0.207  Sum_probs=129.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|-||.++++.|.+.|++|+.++|+                       .+|++|.+++.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            68999999999999999999999999999876                       47999999999999876     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+||+....  ...+..+..+.+|+.++..+.+.+..      .+.++|++||...+.+....+ ..+.....+...
T Consensus        54 ~Vin~aa~~~~~--~ce~~p~~a~~iN~~~~~~la~~~~~------~~~~li~~STd~VFdG~~~~~-y~E~d~~~P~~~  124 (286)
T PF04321_consen   54 VVINCAAYTNVD--ACEKNPEEAYAINVDATKNLAEACKE------RGARLIHISTDYVFDGDKGGP-YTEDDPPNPLNV  124 (286)
T ss_dssp             EEEE------HH--HHHHSHHHHHHHHTHHHHHHHHHHHH------CT-EEEEEEEGGGS-SSTSSS-B-TTS----SSH
T ss_pred             eEeccceeecHH--hhhhChhhhHHHhhHHHHHHHHHHHH------cCCcEEEeeccEEEcCCcccc-cccCCCCCCCCH
Confidence            999999886321  23345677899999999999988743      368999999987764431111 111123345679


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh------------ccCCCHHHHHHHHHHHh
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------GNLRTSEEGADTVLWLA  290 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------------~~~~~~~e~A~~v~~l~  290 (339)
                      |+.+|...+...+..    .+   +...++++++..+..............            ......+|+|+.+..++
T Consensus       125 YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~  197 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELI  197 (286)
T ss_dssp             HHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh----cC---CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHH
Confidence            999999988877652    11   677788899887722222222222221            12345899999999998


Q ss_pred             ccCCC-CCCCcceeeCCCC
Q 019551          291 LQPKE-KLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~-~~~~G~~~~d~~~  308 (339)
                      ..... ....|.|.+.+.+
T Consensus       198 ~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  198 EKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHH-GGG-EEEE---BS
T ss_pred             HhcccccccceeEEEecCc
Confidence            64331 2235777665554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.48  E-value=7.1e-12  Score=111.07  Aligned_cols=185  Identities=17%  Similarity=0.195  Sum_probs=134.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      +||||++|-+|.++++.|. .+..|+.++|..                       +|++|.+.+.+++.+.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 778999998853                       7999999999999986     7999


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY  223 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y  223 (339)
                      +||+|+......  .+.+-+..+.+|..|+.++.+++-.      -+..+|++|+...+-+.... ...+.-...+...|
T Consensus        54 VIn~AAyt~vD~--aE~~~e~A~~vNa~~~~~lA~aa~~------~ga~lVhiSTDyVFDG~~~~-~Y~E~D~~~P~nvY  124 (281)
T COG1091          54 VINAAAYTAVDK--AESEPELAFAVNATGAENLARAAAE------VGARLVHISTDYVFDGEKGG-PYKETDTPNPLNVY  124 (281)
T ss_pred             EEECcccccccc--ccCCHHHHHHhHHHHHHHHHHHHHH------hCCeEEEeecceEecCCCCC-CCCCCCCCCChhhh
Confidence            999999876433  3345678899999999999998744      37899999997665332111 11112234567799


Q ss_pred             HHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH------------hccCCCHHHHHHHHHHHhc
Q 019551          224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF------------AGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       224 ~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~------------~~~~~~~~e~A~~v~~l~s  291 (339)
                      +.||.+-+..++...       -+...+..+|+.............+..            .+.....+++|+++..++.
T Consensus       125 G~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~  197 (281)
T COG1091         125 GRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLE  197 (281)
T ss_pred             hHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHh
Confidence            999999998887652       355666777777654322211111111            1234567999999999886


Q ss_pred             cC
Q 019551          292 QP  293 (339)
Q Consensus       292 ~~  293 (339)
                      ..
T Consensus       198 ~~  199 (281)
T COG1091         198 KE  199 (281)
T ss_pred             cc
Confidence            43

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.46  E-value=8.5e-13  Score=117.47  Aligned_cols=173  Identities=19%  Similarity=0.185  Sum_probs=100.4

Q ss_pred             EEcCCCchHHHHHHHHHHCCC--EEEEEecCchhH---HHHHHHHHhh-----c---CCccEEEEeccCCCHH------H
Q 019551           66 VTGANAGIGYATAEGLASRGA--TVYMVCRSKEKG---ETALSAIRSK-----T---GNENVHLELCDLSSIT------E  126 (339)
Q Consensus        66 ITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~---~~~~~~l~~~-----~---~~~~~~~~~~Dl~~~~------~  126 (339)
                      ||||||.||..+.++|++.+.  +|+++.|..+..   +...+.+.+.     .   ...+++++.+|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  999999986432   1221222111     0   1458999999999753      4


Q ss_pred             HHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          127 IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       127 v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ...+.+       .+|++||||+......     .+++..++|+.|+..+++.+..    . +..+++++||........
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~----~-~~~~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQ----G-KRKRFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTS----S-S---EEEEEEGGGTTS-T
T ss_pred             hhcccc-------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHh----c-cCcceEEeccccccCCCC
Confidence            444444       5899999998775432     3555788999999999887641    2 334899999932222111


Q ss_pred             Cc--------cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccC
Q 019551          207 TD--------DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET  258 (339)
Q Consensus       207 ~~--------~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T  258 (339)
                      ..        ..............|..||...+.+.+..+.+   .|+.+..++||.|-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence            00        00000111222348999999999999887765   378999999999987

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.45  E-value=7.4e-12  Score=114.79  Aligned_cols=192  Identities=18%  Similarity=0.165  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+++||||+|.+|++++++|.++|  .+|.++|..+.... ..++.... ...++.++.+|+.|..++...++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGF-RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcc-cCCceeEEecchhhhhhhhhhcc-----
Confidence            46899999999999999999999998  68999998764211 11111110 13578999999999999888776     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        .. .+||+|+...+..  -..+-+..+++|+.|+..+...+...     +..++|++||.....+.-......+..++
T Consensus        76 --~~-~Vvh~aa~~~~~~--~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~  145 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDF--VENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGEPIINGDESLPY  145 (361)
T ss_pred             --Cc-eEEEeccccCccc--cccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCeecccCCCCCCC
Confidence              45 7777776554332  22356778999999988888876443     67899999998877543221111111233


Q ss_pred             c--chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH
Q 019551          218 D--GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER  271 (339)
Q Consensus       218 ~--~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~  271 (339)
                      |  ....|+.||+-.+.+++..+.   ..+....+++|..|..|.-....+.....
T Consensus       146 p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~  198 (361)
T KOG1430|consen  146 PLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEA  198 (361)
T ss_pred             ccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHH
Confidence            3  235899999988887765543   35688999999999999877776655444

>PRK05865 hypothetical protein; Provisional

Probab=99.43  E-value=5.3e-12  Score=128.13  Aligned_cols=175  Identities=18%  Similarity=0.206  Sum_probs=123.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|+||++++++|+++|++|++++|+....      .     ...+.++.+|++|.+++.++++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            689999999999999999999999999999975321      1     1247788999999999888775       589


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||||+....           .+++|+.++..+++++    .+. +.+++|++||..                      
T Consensus        64 ~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa----~~~-gvkr~V~iSS~~----------------------  105 (854)
T PRK05865         64 VVAHCAWVRGR-----------NDHINIDGTANVLKAM----AET-GTGRIVFTSSGH----------------------  105 (854)
T ss_pred             EEEECCCcccc-----------hHHHHHHHHHHHHHHH----HHc-CCCeEEEECCcH----------------------
Confidence            99999975431           4678999988776654    333 457899999831                      


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH---h------ccCCCHHHHHHHHHHHhccC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF---A------GNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---~------~~~~~~~e~A~~v~~l~s~~  293 (339)
                          |.+.+.+.+       ..|+.+..+.|+.+..|.............   .      ..+...+|+|++++.++..+
T Consensus       106 ----K~aaE~ll~-------~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~  174 (854)
T PRK05865        106 ----QPRVEQMLA-------DCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT  174 (854)
T ss_pred             ----HHHHHHHHH-------HcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC
Confidence                666665543       248999999999999874221111111000   0      12456899999999887532


Q ss_pred             CCCCCCcceeeCC
Q 019551          294 KEKLVSGSFYFDR  306 (339)
Q Consensus       294 ~~~~~~G~~~~d~  306 (339)
                      .  ..+|.|.+-+
T Consensus       175 ~--~~ggvyNIgs  185 (854)
T PRK05865        175 V--IDSGPVNLAA  185 (854)
T ss_pred             C--cCCCeEEEEC
Confidence            2  2356676633

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.43  E-value=1.6e-11  Score=111.41  Aligned_cols=209  Identities=17%  Similarity=0.108  Sum_probs=118.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      +|||||+|.||.++++.|+++|++|++++|+.+......          ...  ..|+.. ...       ......+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cch-------hhhcCCCCE
Confidence            589999999999999999999999999999876532110          001  112221 111       122347999


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      |||+||........+.+..+..+++|+.++..+++++.    +.+. ..++|+.|+...+...... ...+..+..+...
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~i~~S~~~~yg~~~~~-~~~E~~~~~~~~~  135 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIA----AAEQKPKVFISASAVGYYGTSEDR-VFTEEDSPAGDDF  135 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHH----hcCCCceEEEEeeeEEEeCCCCCC-CcCcccCCCCCCh
Confidence            99999975432223334456678899999887777663    2211 1234444444333321111 1111111122223


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH--------H-----hccCCCHHHHHHHHHHH
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER--------F-----AGNLRTSEEGADTVLWL  289 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--------~-----~~~~~~~~e~A~~v~~l  289 (339)
                      |+..+...+...+    .+...++.+..++|+.+..|... ........        +     ...+...+|+|+.++.+
T Consensus       136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~  210 (292)
T TIGR01777       136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA  210 (292)
T ss_pred             HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHH
Confidence            4444444333322    23345899999999999887321 11111100        0     12356789999999999


Q ss_pred             hccCCCCCCCcceeeC
Q 019551          290 ALQPKEKLVSGSFYFD  305 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d  305 (339)
                      +..+.   ..|.|.+-
T Consensus       211 l~~~~---~~g~~~~~  223 (292)
T TIGR01777       211 LENAS---ISGPVNAT  223 (292)
T ss_pred             hcCcc---cCCceEec
Confidence            86432   24666663

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=99.43  E-value=4.4e-12  Score=123.31  Aligned_cols=183  Identities=17%  Similarity=0.206  Sum_probs=122.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchh--HH-HHHHHH---------HhhcC-------CccEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEK--GE-TALSAI---------RSKTG-------NENVH  115 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~--~~-~~~~~l---------~~~~~-------~~~~~  115 (339)
                      -++||+|+||||||.||..++++|++.+.   +|+++.|....  .. ....++         .+..+       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47899999999999999999999998643   68899887531  11 111111         11111       14789


Q ss_pred             EEeccCCC-------HHHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC
Q 019551          116 LELCDLSS-------ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA  188 (339)
Q Consensus       116 ~~~~Dl~~-------~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~  188 (339)
                      ++.+|+++       .+.++++++       .+|+|||+|+.....     +..+..+++|+.|+..+++.+...    .
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~----~  151 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKC----V  151 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhc----C
Confidence            99999984       343444443       589999999976521     346778999999999998876432    1


Q ss_pred             CCCEEEEEcCccccccccC--ccccccC---------------------------------------------C---CCc
Q 019551          189 PDARVITVSSGGMYTAHLT--DDLEFNS---------------------------------------------G---SFD  218 (339)
Q Consensus       189 ~~~~Iv~vsS~~~~~~~~~--~~~~~~~---------------------------------------------~---~~~  218 (339)
                      +..++|++||...++....  .+.++..                                             .   ...
T Consensus       152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (491)
T PLN02996        152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG  231 (491)
T ss_pred             CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence            2358999999877643210  0000000                                             0   001


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                      ....|+.||++.+.+++..    . .|+.+..++|+.|..+..
T Consensus       232 ~pn~Y~~TK~~aE~lv~~~----~-~~lpv~i~RP~~V~G~~~  269 (491)
T PLN02996        232 WPNTYVFTKAMGEMLLGNF----K-ENLPLVIIRPTMITSTYK  269 (491)
T ss_pred             CCCchHhhHHHHHHHHHHh----c-CCCCEEEECCCEeccCCc
Confidence            1135999999999988654    2 389999999999988653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.43  E-value=4.1e-11  Score=109.49  Aligned_cols=141  Identities=13%  Similarity=0.060  Sum_probs=92.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .+++|||||+|.||.+++++|.++|++|+...                          .|+.+.+.+...++..     +
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----K   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----C
Confidence            46899999999999999999999999987432                          2344555555544432     6


Q ss_pred             ccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc---c--Cccccc-c
Q 019551          141 VHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH---L--TDDLEF-N  213 (339)
Q Consensus       141 id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~---~--~~~~~~-~  213 (339)
                      +|++||+||...... ....+.....+++|+.++..+++++...     + .+.+++||...+...   .  ...... +
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee  131 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-----G-LVLTNYATGCIFEYDDAHPLGSGIGFKEE  131 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CCEEEEecceEeCCCCCCCcccCCCCCcC
Confidence            899999999875321 1122445678999999999999987532     2 234555554433211   0  000011 1


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWS  238 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la  238 (339)
                      ..+.+....|+.||.+.+.+++.++
T Consensus       132 ~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        132 DTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHhh
Confidence            1222334679999999999988765

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.35  E-value=4.2e-11  Score=108.87  Aligned_cols=178  Identities=22%  Similarity=0.259  Sum_probs=122.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhh---------cCCccEEEEeccCC------CHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSK---------TGNENVHLELCDLS------SIT  125 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~~Dl~------~~~  125 (339)
                      +++++|||||.+|..+.++|..+ -++|++..|-++. +...+++.+.         ....++..+..|++      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            57999999999999999998875 5699999986552 2222222221         12468999999998      344


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH  205 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~  205 (339)
                      ...++.+       .+|.+||||+.....     ..+.+....|+.|+..+++.+     ..++...+.+|||.+.....
T Consensus        80 ~~~~La~-------~vD~I~H~gA~Vn~v-----~pYs~L~~~NVlGT~evlrLa-----~~gk~Kp~~yVSsisv~~~~  142 (382)
T COG3320          80 TWQELAE-------NVDLIIHNAALVNHV-----FPYSELRGANVLGTAEVLRLA-----ATGKPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHHHhh-------hcceEEecchhhccc-----CcHHHhcCcchHhHHHHHHHH-----hcCCCceeEEEeeeeecccc
Confidence            5555555       699999999877632     224566789999999888865     33244559999998765422


Q ss_pred             ----cCccc----cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          206 ----LTDDL----EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       206 ----~~~~~----~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                          ...+.    +.....-.....|+.||.+.+.+++.    -.++|+++..+.||+|-.+-.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~----A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE----AGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccCCCccccccccccccccCccCCCcchhHHHHHHHHHH----HhhcCCCeEEEecCeeeccCc
Confidence                11111    11112223345799999988887765    444699999999999976543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.31  E-value=7.6e-10  Score=88.58  Aligned_cols=211  Identities=17%  Similarity=0.142  Sum_probs=141.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC--C
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK--N  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--~  138 (339)
                      ..+|+|-||-+.+|.++++.|-+++|-|.-++-.+.+-            ...-.++..|-+=.++-+.+.+++.+.  .
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            46789999999999999999999999998888765320            112233444544455556666666553  3


Q ss_pred             CCccEEEEccccccCCCCCChh---hhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSE---GFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~---~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .++|.+++.||-...+..-+.+   .-+-++.-.+.....-.+.+-.+++   ++|-+-..+.-++.            .
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK---~GGLL~LtGAkaAl------------~  135 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK---PGGLLQLTGAKAAL------------G  135 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC---CCceeeeccccccc------------C
Confidence            5799999999876654332211   1223344444444444444444443   34554444443343            4


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      +.|++..|+++|+|+++|+++|+.+-.  +.|--+.+|.|-..+|||.++.+|+..   ...+...+++++..+....+.
T Consensus       136 gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD---fssWTPL~fi~e~flkWtt~~  212 (236)
T KOG4022|consen  136 GTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD---FSSWTPLSFISEHFLKWTTET  212 (236)
T ss_pred             CCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc---ccCcccHHHHHHHHHHHhccC
Confidence            678999999999999999999998754  567889999999999999999887543   234556688898888887644


Q ss_pred             CCCCCCcce
Q 019551          294 KEKLVSGSF  302 (339)
Q Consensus       294 ~~~~~~G~~  302 (339)
                      ... .+|.+
T Consensus       213 ~RP-ssGsL  220 (236)
T KOG4022|consen  213 SRP-SSGSL  220 (236)
T ss_pred             CCC-CCCce
Confidence            432 34544

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.30  E-value=9.9e-11  Score=101.85  Aligned_cols=213  Identities=15%  Similarity=0.114  Sum_probs=147.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASR--GATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .|.++||||.+.||...+..++..  .++.+.++.-.  .. ....++   ....++..++..|+.+...+..++..   
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~---~~n~p~ykfv~~di~~~~~~~~~~~~---   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEP---VRNSPNYKFVEGDIADADLVLYLFET---   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhh---hccCCCceEeeccccchHHHHhhhcc---
Confidence            388999999999999999999986  56666554311  11 112222   22245788999999999988877664   


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                        ..+|.|+|.|+..+....  .-+--.....|++++..|++.+....    .-.++|++|+...++......-.-+...
T Consensus        79 --~~id~vihfaa~t~vd~s--~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvSTdeVYGds~~~~~~~E~s~  150 (331)
T KOG0747|consen   79 --EEIDTVIHFAAQTHVDRS--FGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVSTDEVYGDSDEDAVVGEASL  150 (331)
T ss_pred             --CchhhhhhhHhhhhhhhh--cCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEecccceecCcccccccccccc
Confidence              489999999987664321  11223346789999999988875542    3568999999888864322211112233


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHHh--------------ccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFA--------------GNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~--------------~~~~~~~  280 (339)
                      ..+..+|++||+|.+++.+++.+.|   |+.|..+.-+.|..|..-..  .|.+.+...              +.+.-.+
T Consensus       151 ~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ve  227 (331)
T KOG0747|consen  151 LNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVE  227 (331)
T ss_pred             CCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHH
Confidence            4456789999999999999998865   79999999999999854322  343333111              2245689


Q ss_pred             HHHHHHHHHhc
Q 019551          281 EGADTVLWLAL  291 (339)
Q Consensus       281 e~A~~v~~l~s  291 (339)
                      |+++++-..+.
T Consensus       228 D~~ea~~~v~~  238 (331)
T KOG0747|consen  228 DVSEAFKAVLE  238 (331)
T ss_pred             HHHHHHHHHHh
Confidence            99999888875

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.27  E-value=2.2e-10  Score=102.52  Aligned_cols=182  Identities=14%  Similarity=0.132  Sum_probs=135.2

Q ss_pred             CCEEEEEcC-CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGA-NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGa-s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .++|+|.|. +.-|++.+|..|-++|+-|+++..+.++.+...++    . ...+.....|..++.++...++++.+...
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----D-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----c-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            358999995 79999999999999999999999988764433322    1 23577777888777777776666654322


Q ss_pred             --------------CccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEc-Ccc
Q 019551          140 --------------PVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVS-SGG  200 (339)
Q Consensus       140 --------------~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vs-S~~  200 (339)
                                    .+..||.......+..   .++.+.|.+.++.|+..++..++.++|+|+.+. .+.+||.+. |..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence                          2444554443333222   367899999999999999999999999998732 345555544 443


Q ss_pred             ccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          201 MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      ...            ..|..+.-+....++.+|+++|++|+.+.||.|..+..|.++-.
T Consensus       158 ssl------------~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SSL------------NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hcc------------CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            321            34556677888899999999999999999999999999998865

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.27  E-value=2.1e-10  Score=104.04  Aligned_cols=185  Identities=9%  Similarity=0.005  Sum_probs=115.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC-c
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP-V  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-i  141 (339)
                      +++||||||.||+.++++|.++|++|.++.|++++..           ...+..+.+|+.|++++..+++.. +.... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3799999999999999999999999999999987532           123556678999999999888643 22334 8


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |.++++++...       +..+            ..+.++..+++. +-.+||++||......            .+   
T Consensus        69 d~v~~~~~~~~-------~~~~------------~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~------------~~---  113 (285)
T TIGR03649        69 SAVYLVAPPIP-------DLAP------------PMIKFIDFARSK-GVRRFVLLSASIIEKG------------GP---  113 (285)
T ss_pred             eEEEEeCCCCC-------ChhH------------HHHHHHHHHHHc-CCCEEEEeeccccCCC------------Cc---
Confidence            99999876421       1111            112344445444 5578999998654311            01   


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCccCc-chhHH------H---HHhccCCCHHHHHHHHHHHh
Q 019551          222 QYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGVAKS-MPSFN------E---RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~-~~~~~------~---~~~~~~~~~~e~A~~v~~l~  290 (339)
                          .+...+.+.       .. .|+....++|+++..++.... .....      .   .....+.+++|+|+.++.++
T Consensus       114 ----~~~~~~~~l-------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l  182 (285)
T TIGR03649       114 ----AMGQVHAHL-------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRAL  182 (285)
T ss_pred             ----hHHHHHHHH-------HhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHh
Confidence                111112111       12 489999999998775432111 00000      0   00124678999999999998


Q ss_pred             ccCCCCCCCcceeeCCC
Q 019551          291 LQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~  307 (339)
                      .++.  ..++.|.+-+.
T Consensus       183 ~~~~--~~~~~~~l~g~  197 (285)
T TIGR03649       183 TDKV--APNTDYVVLGP  197 (285)
T ss_pred             cCCC--cCCCeEEeeCC
Confidence            7543  23455655443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.26  E-value=8.9e-10  Score=120.43  Aligned_cols=211  Identities=18%  Similarity=0.204  Sum_probs=135.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC----CEEEEEecCchhHHHHHHHHHh---hcC------CccEEEEeccCCCH---
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG----ATVYMVCRSKEKGETALSAIRS---KTG------NENVHLELCDLSSI---  124 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G----~~Vvl~~r~~~~~~~~~~~l~~---~~~------~~~~~~~~~Dl~~~---  124 (339)
                      .++|+||||+|.||..++++|+++|    ++|+++.|+....... +.+..   .++      ..++.++.+|++++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5799999999999999999999987    7899999986543222 22211   110      13688899999854   


Q ss_pred             ---HHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc
Q 019551          125 ---TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM  201 (339)
Q Consensus       125 ---~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~  201 (339)
                         +...++.       ..+|++||||+.....     ..+......|+.|+..+++.+..    . +..+++++||.+.
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAE----G-KAKQFSFVSSTSA 1112 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHh----C-CCceEEEEeCeee
Confidence               2333222       3689999999976422     12344456899999999887632    2 3468999999876


Q ss_pred             cccccC----------------ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-
Q 019551          202 YTAHLT----------------DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-  264 (339)
Q Consensus       202 ~~~~~~----------------~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-  264 (339)
                      +.....                .+.............|+.||.+.+.+++..+    ..|+.+..+.||.|..+..... 
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~----~~g~~~~i~Rpg~v~G~~~~g~~ 1188 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG----KRGLRGCIVRPGYVTGDSKTGAT 1188 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH----hCCCCEEEECCCccccCCCcCCC
Confidence            632100                0000000111123469999999998887643    3489999999999987632211 


Q ss_pred             -----chhHHHH--Hh---------ccCCCHHHHHHHHHHHhccC
Q 019551          265 -----MPSFNER--FA---------GNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       265 -----~~~~~~~--~~---------~~~~~~~e~A~~v~~l~s~~  293 (339)
                           .......  ..         ..+...+++|++++.++..+
T Consensus      1189 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1189 NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence                 1111110  00         12455899999999997643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=1.9e-10  Score=100.23  Aligned_cols=221  Identities=20%  Similarity=0.189  Sum_probs=154.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh--hcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS--KTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|++||||-||-=|..+|+.|+++||.|..+.|..+......-.+.+  ...+.+++++.+|++|...+.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999998864322211001111  112346889999999999999999987    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       .+|-+.|-|+.+.-.  .+.++.+...+++..|++.++.++.-+ .  .+..++...||+.-++.. ...+..+..|+.
T Consensus        78 -~PdEIYNLaAQS~V~--vSFe~P~~T~~~~~iGtlrlLEaiR~~-~--~~~~rfYQAStSE~fG~v-~~~pq~E~TPFy  150 (345)
T COG1089          78 -QPDEIYNLAAQSHVG--VSFEQPEYTADVDAIGTLRLLEAIRIL-G--EKKTRFYQASTSELYGLV-QEIPQKETTPFY  150 (345)
T ss_pred             -Cchhheecccccccc--ccccCcceeeeechhHHHHHHHHHHHh-C--CcccEEEecccHHhhcCc-ccCccccCCCCC
Confidence             789999999866533  466777888999999999999876433 1  135778777776655421 111223347888


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHc---CCCeEEEEeeCCcccCCCccCcchhHHHHH---------------hccCCCHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYK---EKGIGFYSMHPGWAETPGVAKSMPSFNERF---------------AGNLRTSE  280 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---------------~~~~~~~~  280 (339)
                      +.++|+++|.....++..++..|.   -.||-+|.=+|.-=.|=.+++. ......+               .+.|+-+.
T Consensus       151 PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKI-t~ava~Ik~G~q~~l~lGNldAkRDWG~A~  229 (345)
T COG1089         151 PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKI-TRAVARIKLGLQDKLYLGNLDAKRDWGHAK  229 (345)
T ss_pred             CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHH-HHHHHHHHccccceEEeccccccccccchH
Confidence            899999999999999998887765   3577777777754333111111 1111111               23477788


Q ss_pred             HHHHHHHHHhccC
Q 019551          281 EGADTVLWLALQP  293 (339)
Q Consensus       281 e~A~~v~~l~s~~  293 (339)
                      |-.+.++.++..+
T Consensus       230 DYVe~mwlmLQq~  242 (345)
T COG1089         230 DYVEAMWLMLQQE  242 (345)
T ss_pred             HHHHHHHHHHccC
Confidence            8888888877643

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.24  E-value=3.6e-10  Score=111.35  Aligned_cols=131  Identities=17%  Similarity=0.246  Sum_probs=92.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchh--HHHHH-HH---------HHhhcC-------CccEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEK--GETAL-SA---------IRSKTG-------NENVH  115 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~--~~~~~-~~---------l~~~~~-------~~~~~  115 (339)
                      -++||+|+||||||.||+.++++|++.+.   +|+++.|..+.  ..+.. ++         +.+..+       ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            36899999999999999999999998753   68999886432  22221 12         222222       24688


Q ss_pred             EEeccCCCH------HHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC
Q 019551          116 LELCDLSSI------TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP  189 (339)
Q Consensus       116 ~~~~Dl~~~------~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~  189 (339)
                      ++.+|++++      +..+.+.+       .+|++||+|+....     .+..+..+++|+.|+..+++.+...    ..
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~----~~  259 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKC----KK  259 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHc----CC
Confidence            999999987      23333332       59999999987652     2456778999999999998876432    12


Q ss_pred             CCEEEEEcCcccccc
Q 019551          190 DARVITVSSGGMYTA  204 (339)
Q Consensus       190 ~~~Iv~vsS~~~~~~  204 (339)
                      ..++|++||...+..
T Consensus       260 lk~fV~vSTayVyG~  274 (605)
T PLN02503        260 LKLFLQVSTAYVNGQ  274 (605)
T ss_pred             CCeEEEccCceeecC
Confidence            357999999766543

>PLN00016 RNA-binding protein; Provisional

Probab=99.23  E-value=2.9e-09  Score=100.66  Aligned_cols=203  Identities=20%  Similarity=0.240  Sum_probs=119.9

Q ss_pred             cCCCEEEEE----cCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           59 IEGKNCVVT----GANAGIGYATAEGLASRGATVYMVCRSKEKGETALS----AIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        59 l~~k~vlIT----Gas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~----~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      ...++||||    ||+|.||..++++|+++|++|++++|+.+.......    .+.+. ....+.++.+|+.|   +.++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL-SSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh-hhcCceEEEecHHH---HHhh
Confidence            345789999    999999999999999999999999998764322110    01110 01247788888876   3332


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      +.     ...+|+|||++|..                  ..+    ++.++..+++. +-.++|++||.+.+......+ 
T Consensus       126 ~~-----~~~~d~Vi~~~~~~------------------~~~----~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~~p-  176 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD------------------LDE----VEPVADWAKSP-GLKQFLFCSSAGVYKKSDEPP-  176 (378)
T ss_pred             hc-----cCCccEEEeCCCCC------------------HHH----HHHHHHHHHHc-CCCEEEEEccHhhcCCCCCCC-
Confidence            21     13689999987521                  112    23333444433 456899999987764311100 


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHHHHh--------------cc
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERFA--------------GN  275 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~--------------~~  275 (339)
                      ..+.....   .+. +|...+.+.+       ..++.+..++|+.+..+....... .......              ..
T Consensus       177 ~~E~~~~~---p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~  245 (378)
T PLN00016        177 HVEGDAVK---PKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQ  245 (378)
T ss_pred             CCCCCcCC---Ccc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeec
Confidence            00111111   122 7877776543       248999999999999875332111 1111110              12


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +...+|+|+.++.++..+..  .++.|.+-++
T Consensus       246 ~i~v~Dva~ai~~~l~~~~~--~~~~yni~~~  275 (378)
T PLN00016        246 LGHVKDLASMFALVVGNPKA--AGQIFNIVSD  275 (378)
T ss_pred             eecHHHHHHHHHHHhcCccc--cCCEEEecCC
Confidence            44689999999999865322  3455655433

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.7e-09  Score=90.85  Aligned_cols=171  Identities=17%  Similarity=0.098  Sum_probs=115.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||| |+|.++++.|+++|++|++++|++++.+.....+..   ...+.++.+|++|.+++.++++.+...++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 788889999999999999999998776665544432   24688899999999999999999988889999


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++|+.+-...                    +-.+.+++...=.+. +.-+++.+-...+..+                  
T Consensus        78 ~lv~~vh~~~--------------------~~~~~~~~~~~gv~~-~~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         78 LAVAWIHSSA--------------------KDALSVVCRELDGSS-ETYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             EEEEeccccc--------------------hhhHHHHHHHHccCC-CCceEEEEeCCcCCch------------------
Confidence            9997764332                    222223222111111 2236766653332100                  


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCCc
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSG  300 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G  300 (339)
                                  +..+..++..++.-.-|..|++..+-.            .||.+-+|+++.|+..+..+...++-|
T Consensus       119 ------------~~~~~~~~~~~~~~~~i~lgf~~~~~~------------~rwlt~~ei~~gv~~~~~~~~~~~~~g  172 (177)
T PRK08309        119 ------------RIPSEKIGPARCSYRRVILGFVLEDTY------------SRWLTHEEISDGVIKAIESDADEHVVG  172 (177)
T ss_pred             ------------hhhhhhhhhcCCceEEEEEeEEEeCCc------------cccCchHHHHHHHHHHHhcCCCeEEEE
Confidence                        111122233455666778898887532            467899999999999987666554444

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.17  E-value=1.4e-09  Score=94.79  Aligned_cols=178  Identities=17%  Similarity=0.155  Sum_probs=127.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++++++||||+|.||.+++.+|..+|+.|+++|--........   ....+......+.-|+..+     ++.      
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~---~~~~~~~~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENL---EHWIGHPNFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhc---chhccCcceeEEEeechhH-----HHH------
Confidence            56789999999999999999999999999999986544332222   2222344677777777665     333      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc---Ccccccc-C
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL---TDDLEFN-S  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~---~~~~~~~-~  214 (339)
                       .+|-++|-|....+....  ..--+++.+|+.++..++..+.+.      +.|++..|+...++.+.   ..+.++. -
T Consensus        91 -evD~IyhLAapasp~~y~--~npvktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~e~ywg~v  161 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPPHYK--YNPVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQVETYWGNV  161 (350)
T ss_pred             -HhhhhhhhccCCCCcccc--cCccceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCcccccccc
Confidence             478899999877665432  112456789999999998876443      47899999988886432   2222222 2


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA  262 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  262 (339)
                      .+....+.|...|.+.+.|+.....+   .||.|....+-.+..|...
T Consensus       162 npigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~  206 (350)
T KOG1429|consen  162 NPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMH  206 (350)
T ss_pred             CcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccc
Confidence            45566788999999999988877655   5899988888888877543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.17  E-value=8.5e-10  Score=111.83  Aligned_cols=152  Identities=13%  Similarity=0.079  Sum_probs=102.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .+++|||||+|.||+++++.|.++|++|...                          ..|++|.+.+...++..     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----C
Confidence            4579999999999999999999999887311                          13677888887776654     6


Q ss_pred             ccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc---c-Ccccccc--
Q 019551          141 VHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH---L-TDDLEFN--  213 (339)
Q Consensus       141 id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~---~-~~~~~~~--  213 (339)
                      +|+|||+|+...... ....+..+..+++|+.++..+++++...      +.+.+++||...+...   . ....++.  
T Consensus       429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceecCCcccccccCCCCCcC
Confidence            899999999765321 1233456788999999999999987542      3456677765543210   0 0000111  


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEee
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMH  252 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~  252 (339)
                      ..+.+....|+.||.+.+.+++.+..   ...+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence            12223346899999999999877632   2356666555

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=9e-10  Score=106.49  Aligned_cols=155  Identities=14%  Similarity=0.066  Sum_probs=105.0

Q ss_pred             EEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEE
Q 019551           66 VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLV  145 (339)
Q Consensus        66 ITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lI  145 (339)
                      |+||++|+|.++++.|...|+.|+.+.+.+.+..        .....++..+.+|.+..+..+                 
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~-----------------   97 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITDPA-----------------   97 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCCHH-----------------
Confidence            8888999999999999999999999877554110        000112222223333222221                 


Q ss_pred             EccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHHHH
Q 019551          146 NNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR  225 (339)
Q Consensus       146 nnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~  225 (339)
                                     +        +.+.+.+++..++.|.   +.|+||+++|....               .+...|+.
T Consensus        98 ---------------~--------l~~~~~~~~~~l~~l~---~~griv~i~s~~~~---------------~~~~~~~~  136 (450)
T PRK08261         98 ---------------D--------LKALYEFFHPVLRSLA---PCGRVVVLGRPPEA---------------AADPAAAA  136 (450)
T ss_pred             ---------------H--------HHHHHHHHHHHHHhcc---CCCEEEEEcccccc---------------CCchHHHH
Confidence                           1        1234456777777775   45899999987653               12346999


Q ss_pred             hHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       226 sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      +|+++.+|+|+++.|+ ++||+++.|.|++                     ..+++++..+.|+++.......+..+.++
T Consensus       137 akaal~gl~rsla~E~-~~gi~v~~i~~~~---------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~  194 (450)
T PRK08261        137 AQRALEGFTRSLGKEL-RRGATAQLVYVAP---------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVG  194 (450)
T ss_pred             HHHHHHHHHHHHHHHh-hcCCEEEEEecCC---------------------CCHHHHHHHHHHhcCCccCCccCcEEEec
Confidence            9999999999999999 7899999999875                     35788888898988755444433333445


Q ss_pred             CCC
Q 019551          306 RAE  308 (339)
Q Consensus       306 ~~~  308 (339)
                      ++.
T Consensus       195 ~~~  197 (450)
T PRK08261        195 AAD  197 (450)
T ss_pred             CCc
Confidence            543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.14  E-value=1.1e-10  Score=102.00  Aligned_cols=99  Identities=13%  Similarity=0.183  Sum_probs=74.3

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGA-NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGa-s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +=.||.. |||||+++|++|+++|++|+++++...        +... +     ...+|+++.+++.++++.+.+.++++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~-~-----~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE-P-----HPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc-c-----CCcceeecHHHHHHHHHHHHHHcCCC
Confidence            4456665 678999999999999999999986311        1000 0     13589999999999999999989999


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHH
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITE  178 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~  178 (339)
                      |+||||||+.....  ..+.++|+++   +..+.|++++
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence            99999999865433  2567778766   4456666665

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.14  E-value=6.6e-10  Score=96.81  Aligned_cols=205  Identities=22%  Similarity=0.296  Sum_probs=123.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      ++||||||-||++++.+|.+.|++|+++.|++.+.+...            ..   .+...+.+.+..+      ..+|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~------------~~---~v~~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL------------HP---NVTLWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc------------Cc---cccccchhhhccc------CCCCE
Confidence            589999999999999999999999999999987543211            11   1111222222211      17999


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY  223 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y  223 (339)
                      +||-||-.-.....+.+.-+..++    +-+..++.+.....+...+..+.+-+|..++.++.... .+.....++.   
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~-~~tE~~~~g~---  131 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDR-VVTEESPPGD---  131 (297)
T ss_pred             EEECCCCccccccCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCce-eeecCCCCCC---
Confidence            999999776555556665555554    45556666666666554556666666666665542211 1111111111   


Q ss_pred             HHhHHHHHHHHHHHHH---HHcCCCeEEEEeeCCcccCCC---ccCcchhHHHHHhc---------cCCCHHHHHHHHHH
Q 019551          224 ARNKRVQVALTEKWSE---MYKEKGIGFYSMHPGWAETPG---VAKSMPSFNERFAG---------NLRTSEEGADTVLW  288 (339)
Q Consensus       224 ~~sKaa~~~l~~~la~---e~~~~gI~v~~v~PG~v~T~~---~~~~~~~~~~~~~~---------~~~~~~e~A~~v~~  288 (339)
                          -.+..+++.|=.   .....|+||..+.-|.|-.+.   .....+.+..-.-+         .|...||..+.|.|
T Consensus       132 ----~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~f  207 (297)
T COG1090         132 ----DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILF  207 (297)
T ss_pred             ----ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHH
Confidence                122234443332   333469999999999998742   22222222211111         25568999999999


Q ss_pred             HhccCCCCCCCcceee
Q 019551          289 LALQPKEKLVSGSFYF  304 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~  304 (339)
                      ++.+..   ..|-|..
T Consensus       208 ll~~~~---lsGp~N~  220 (297)
T COG1090         208 LLENEQ---LSGPFNL  220 (297)
T ss_pred             HHhCcC---CCCcccc
Confidence            997543   3566654

>PRK12320 hypothetical protein; Provisional

Probab=99.11  E-value=7.4e-09  Score=103.42  Aligned_cols=178  Identities=13%  Similarity=0.097  Sum_probs=115.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|.||++++++|.++|++|++++|+....           ....+.++.+|+++.. +.+++.       .+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            589999999999999999999999999999875321           1235788999999874 443332       589


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+|+....      +    ...+|+.++.++++++.    +.  +.++|++||..+..           .      .
T Consensus        63 ~VIHLAa~~~~------~----~~~vNv~Gt~nLleAA~----~~--GvRiV~~SS~~G~~-----------~------~  109 (699)
T PRK12320         63 AVIHLAPVDTS------A----PGGVGITGLAHVANAAA----RA--GARLLFVSQAAGRP-----------E------L  109 (699)
T ss_pred             EEEEcCccCcc------c----hhhHHHHHHHHHHHHHH----Hc--CCeEEEEECCCCCC-----------c------c
Confidence            99999986421      1    12578999988888763    22  34899999864320           0      1


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-----hcc---CCCHHHHHHHHHHHhccCC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----AGN---LRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-----~~~---~~~~~e~A~~v~~l~s~~~  294 (339)
                      |.    .    .+.+..+   .++.+..+.|+.+..+............+     .+.   +.-.+|++++++.++..+ 
T Consensus       110 ~~----~----aE~ll~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~-  177 (699)
T PRK12320        110 YR----Q----AETLVST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD-  177 (699)
T ss_pred             cc----H----HHHHHHh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC-
Confidence            21    1    2222222   35788999999998874332211111111     121   236899999998887532 


Q ss_pred             CCCCCcceeeCCC
Q 019551          295 EKLVSGSFYFDRA  307 (339)
Q Consensus       295 ~~~~~G~~~~d~~  307 (339)
                         .+|.|.+-++
T Consensus       178 ---~~GiyNIG~~  187 (699)
T PRK12320        178 ---RNGVVDLATP  187 (699)
T ss_pred             ---CCCEEEEeCC
Confidence               2455656444

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.88  E-value=2e-07  Score=89.18  Aligned_cols=222  Identities=16%  Similarity=0.174  Sum_probs=143.7

Q ss_pred             ccCCCEEEEEcCC-CchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGAN-AGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas-~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      .+.+|++|||||+ +.||.+++..|+.-|++||++..+ .++..+..+.|-..+  ++..+.++..+..+..+|+.+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            3779999999998 679999999999999999988654 444455666665544  345678889999999999999999


Q ss_pred             HhcCC--------------CCccEEEEccccccCCCCCCh-hhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEE
Q 019551          134 FSLKN--------------KPVHVLVNNAGVLENNRLITS-EGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITV  196 (339)
Q Consensus       134 ~~~~~--------------~~id~lInnAG~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~v  196 (339)
                      +-+.-              -.+|.++-.|++...+..-+. ..-+..+++-+.+...++-.+.++-.+++  ...+||.-
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP  552 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP  552 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence            85321              136888888877665533111 11222334444444444444433321111  11344544


Q ss_pred             cCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHc-CCCeEEEEeeCCcccCC-CccCcch--hHHHHH
Q 019551          197 SSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK-EKGIGFYSMHPGWAETP-GVAKSMP--SFNERF  272 (339)
Q Consensus       197 sS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~v~~v~PG~v~T~-~~~~~~~--~~~~~~  272 (339)
                      .|..             ...|.+-.+|+-||++++.+..-|..|-. ...+.+..-.-||++.. ++..+..  ...+..
T Consensus       553 gSPN-------------rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~  619 (866)
T COG4982         553 GSPN-------------RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKA  619 (866)
T ss_pred             CCCC-------------CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHh
Confidence            4432             23566778999999999999888777642 22355556667999854 3333321  122223


Q ss_pred             hccCCCHHHHHHHHHHHhcc
Q 019551          273 AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~  292 (339)
                      --+.-+++|+|..++-|++.
T Consensus       620 GV~tyS~~EmA~~LLgL~sa  639 (866)
T COG4982         620 GVRTYSTDEMAFNLLGLASA  639 (866)
T ss_pred             CceecCHHHHHHHHHhhccH
Confidence            33567899999999999874

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.86  E-value=8.9e-09  Score=97.04  Aligned_cols=81  Identities=23%  Similarity=0.302  Sum_probs=63.3

Q ss_pred             ccCCCEEEEEcC---------------C-CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC
Q 019551           58 RIEGKNCVVTGA---------------N-AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL  121 (339)
Q Consensus        58 ~l~~k~vlITGa---------------s-~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  121 (339)
                      +++||++|||||               | |++|+++|++|+++|++|++++++.+ ++         .+ .  .+..+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~-~--~~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TP-A--GVKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CC-C--CcEEEcc
Confidence            478999999999               4 45999999999999999999998753 11         01 1  1345799


Q ss_pred             CCHHHHHHHHHHHhcCCCCccEEEEccccccCC
Q 019551          122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENN  154 (339)
Q Consensus       122 ~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~  154 (339)
                      ++.+++.+.++   +.++++|++|||||+....
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            99888877765   3467899999999986544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.86  E-value=5.1e-08  Score=85.69  Aligned_cols=184  Identities=16%  Similarity=0.177  Sum_probs=109.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      |+|+||+|.+|+.+++.|.+.|++|.++.|+..+  ...+++...    .++++.+|+.|.+++.++++       .+|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999999842  223333332    35677999999999988887       7999


Q ss_pred             EEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHH
Q 019551          144 LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY  223 (339)
Q Consensus       144 lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y  223 (339)
                      ++++.+...      ..+.+        ....+++++.    +. +-.++|+ ||.......       .....|....|
T Consensus        68 v~~~~~~~~------~~~~~--------~~~~li~Aa~----~a-gVk~~v~-ss~~~~~~~-------~~~~~p~~~~~  120 (233)
T PF05368_consen   68 VFSVTPPSH------PSELE--------QQKNLIDAAK----AA-GVKHFVP-SSFGADYDE-------SSGSEPEIPHF  120 (233)
T ss_dssp             EEEESSCSC------CCHHH--------HHHHHHHHHH----HH-T-SEEEE-SEESSGTTT-------TTTSTTHHHHH
T ss_pred             EEeecCcch------hhhhh--------hhhhHHHhhh----cc-ccceEEE-EEecccccc-------cccccccchhh
Confidence            998887654      11111        1223444443    33 4566775 443322110       00112223333


Q ss_pred             HHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH---------HHH--hccC-CCHHHHHHHHHHH
Q 019551          224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN---------ERF--AGNL-RTSEEGADTVLWL  289 (339)
Q Consensus       224 ~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~---------~~~--~~~~-~~~~e~A~~v~~l  289 (339)
                       ..|..++...+.       .++..+.|.||+..........+  ...         ...  ...+ .+.+|+|+.+..+
T Consensus       121 -~~k~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~i  192 (233)
T PF05368_consen  121 -DQKAEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAI  192 (233)
T ss_dssp             -HHHHHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHH
T ss_pred             -hhhhhhhhhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHH
Confidence             467766554433       38999999999765432211110  000         000  0123 3789999999999


Q ss_pred             hccCCC
Q 019551          290 ALQPKE  295 (339)
Q Consensus       290 ~s~~~~  295 (339)
                      +.+|..
T Consensus       193 l~~p~~  198 (233)
T PF05368_consen  193 LLDPEK  198 (233)
T ss_dssp             HHSGGG
T ss_pred             HcChHH
Confidence            987544

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.79  E-value=2.8e-08  Score=90.22  Aligned_cols=83  Identities=24%  Similarity=0.311  Sum_probs=64.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCc---hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSK---EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +++|+++|||| ||+|++++..|++.|++ |++++|+.   +++++..+++.+..+  .+.+..+|+++.+++.+.++  
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhhhHHHhhhc--
Confidence            57899999999 69999999999999996 99999997   677777776654432  34556678888777765544  


Q ss_pred             hcCCCCccEEEEccccc
Q 019551          135 SLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~  151 (339)
                           ..|+||||..+.
T Consensus       199 -----~~DilINaTp~G  210 (289)
T PRK12548        199 -----SSDILVNATLVG  210 (289)
T ss_pred             -----cCCEEEEeCCCC
Confidence                 469999997543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.70  E-value=1.4e-07  Score=80.65  Aligned_cols=84  Identities=24%  Similarity=0.305  Sum_probs=67.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++++++|+||+|++|+++++.|++.|++|++++|+.+++++..+++.+..+   .....+|..+.+++.+.+.     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG---EGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC---CcEEEeeCCCHHHHHHHHh-----
Confidence            36789999999999999999999999999999999999988888777754332   3355678888888777664     


Q ss_pred             CCCccEEEEccccc
Q 019551          138 NKPVHVLVNNAGVL  151 (339)
Q Consensus       138 ~~~id~lInnAG~~  151 (339)
                        ..|++|++....
T Consensus        97 --~~diVi~at~~g  108 (194)
T cd01078          97 --GADVVFAAGAAG  108 (194)
T ss_pred             --cCCEEEECCCCC
Confidence              578888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.64  E-value=1.1e-07  Score=89.44  Aligned_cols=107  Identities=20%  Similarity=0.294  Sum_probs=72.7

Q ss_pred             ccCCCEEEEEcC---------------CCc-hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC
Q 019551           58 RIEGKNCVVTGA---------------NAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL  121 (339)
Q Consensus        58 ~l~~k~vlITGa---------------s~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  121 (339)
                      +++||++|||||               |+| +|.++|++|.++|++|++++++.+..          .+ ..  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~-~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TP-PG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CC-CC--cEEEEe
Confidence            478999999999               667 99999999999999999988765421          11 11  245799


Q ss_pred             CCHHHH-HHHHHHHhcCCCCccEEEEccccccCCCCC-Chhhh---hhhhhhhhhHHHHHHHHH
Q 019551          122 SSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLI-TSEGF---ELNFAVNVLGTYTITESM  180 (339)
Q Consensus       122 ~~~~~v-~~~~~~~~~~~~~id~lInnAG~~~~~~~~-~~~~~---~~~~~vN~~~~~~l~~~~  180 (339)
                      ++.+++ +++.++.   ++.+|++|||||+....... ....+   ...+.+|+..+--+++.+
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHH
Confidence            999988 5555443   46799999999997654321 11111   123445655554454444

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.62  E-value=2e-06  Score=81.56  Aligned_cols=129  Identities=19%  Similarity=0.312  Sum_probs=90.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC--C-EEEEEecCch--hHH---------HHHHHHHhhcCC--ccEEEEeccC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG--A-TVYMVCRSKE--KGE---------TALSAIRSKTGN--ENVHLELCDL  121 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G--~-~Vvl~~r~~~--~~~---------~~~~~l~~~~~~--~~~~~~~~Dl  121 (339)
                      -++||+++||||||++|+-+.++|+..-  . +++++-|...  ..+         .+.+++.+..|.  .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            4789999999999999999999999753  2 6778777532  111         222333444333  3677788888


Q ss_pred             CCHH------HHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEE
Q 019551          122 SSIT------EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVIT  195 (339)
Q Consensus       122 ~~~~------~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~  195 (339)
                      ++++      +.+.+.       ..+|++||+|+....     .+.++..+.+|..|+..+++.+....+    -...+.
T Consensus        89 ~~~~LGis~~D~~~l~-------~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~----l~~~vh  152 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLA-------DEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVK----LKALVH  152 (467)
T ss_pred             cCcccCCChHHHHHHH-------hcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhh----hheEEE
Confidence            8543      333233       379999999987653     255677889999999999998766543    345788


Q ss_pred             EcCcccc
Q 019551          196 VSSGGMY  202 (339)
Q Consensus       196 vsS~~~~  202 (339)
                      +|..-..
T Consensus       153 VSTAy~n  159 (467)
T KOG1221|consen  153 VSTAYSN  159 (467)
T ss_pred             eehhhee
Confidence            8875544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.54  E-value=2.2e-06  Score=72.72  Aligned_cols=191  Identities=15%  Similarity=0.196  Sum_probs=117.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++|||++|-+|.||.+.+.+.|.   +.++.+..                       .+|+++.++.++++++.    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence            6899999999999999999998875   33443321                       27999999999999975    


Q ss_pred             CCccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc----cCcccc
Q 019551          139 KPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH----LTDDLE  211 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~----~~~~~~  211 (339)
                       ++-.+||.|++......   .+.+-|...+++|-    +.++.+..+     +-..+++..|.+.+...    ++..+.
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~-----gv~K~vsclStCIfPdkt~yPIdEtmv  124 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEH-----GVKKVVSCLSTCIFPDKTSYPIDETMV  124 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHh-----chhhhhhhcceeecCCCCCCCCCHHHh
Confidence             67889999876653221   23344444433332    223333222     23346666666554321    111222


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHH--------------
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNER--------------  271 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~--------------  271 (339)
                      .+-.+-|....|+-+|..+.-..++++.++   |-...++.|-.+..|--.-.      .|.....              
T Consensus       125 h~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~V  201 (315)
T KOG1431|consen  125 HNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTV  201 (315)
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEE
Confidence            222344566789999988888888888876   44566667766666532111      1221111              


Q ss_pred             -----HhccCCCHHHHHHHHHHHhcc
Q 019551          272 -----FAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       272 -----~~~~~~~~~e~A~~v~~l~s~  292 (339)
                           +++.+.-.+|.|+..+|++..
T Consensus       202 wGsG~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  202 WGSGSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             ecCCChHHHHhhHhHHHHHHHHHHHh
Confidence                 122344578899999999853

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.46  E-value=7.1e-07  Score=78.19  Aligned_cols=98  Identities=16%  Similarity=0.172  Sum_probs=63.6

Q ss_pred             CEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .+-.||+.|+| ||+++|++|+++|++|++++|+....         ..+...+.++.+  .+.++.   .+.+.+.++.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v--~s~~~m---~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEI--ENVDDL---LETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEE--ecHHHH---HHHHHHHhcC
Confidence            35578887665 99999999999999999998764210         001124555543  223332   2233333457


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHH
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGT  173 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~  173 (339)
                      +|++|||||+.....  ..+.+.+..++++|.+..
T Consensus        82 ~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            899999999875332  246778888888876554

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.40  E-value=9e-06  Score=72.85  Aligned_cols=180  Identities=21%  Similarity=0.161  Sum_probs=115.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      .++||||||.+|.+++++|.++|++|.+..|++++.....         ..+.+...|+.+...+...++       .+|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            5899999999999999999999999999999998766543         357888899999999988876       688


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      .+++..+... ... .      .............+...      .+..+++.+|+..+..              .....
T Consensus        66 ~~~~i~~~~~-~~~-~------~~~~~~~~~~~~a~~a~------~~~~~~~~~s~~~~~~--------------~~~~~  117 (275)
T COG0702          66 GVLLISGLLD-GSD-A------FRAVQVTAVVRAAEAAG------AGVKHGVSLSVLGADA--------------ASPSA  117 (275)
T ss_pred             EEEEEecccc-ccc-c------hhHHHHHHHHHHHHHhc------CCceEEEEeccCCCCC--------------CCccH
Confidence            8888777654 221 1      11222233333333321      1345677777766541              23467


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEee-CCcccCCCccCcchhHHHH-------H--hccCCCHHHHHHHHHHHhcc
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMH-PGWAETPGVAKSMPSFNER-------F--AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~-PG~v~T~~~~~~~~~~~~~-------~--~~~~~~~~e~A~~v~~l~s~  292 (339)
                      |..+|...+...++       .|+.-..+. ++++....... .......       +  .-.....+|++..+...+..
T Consensus       118 ~~~~~~~~e~~l~~-------sg~~~t~lr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~  189 (275)
T COG0702         118 LARAKAAVEAALRS-------SGIPYTTLRRAAFYLGAGAAF-IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDA  189 (275)
T ss_pred             HHHHHHHHHHHHHh-------cCCCeEEEecCeeeeccchhH-HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcC
Confidence            99999988886654       355544444 44444322110 0000000       0  11245678899888888765


Q ss_pred             CC
Q 019551          293 PK  294 (339)
Q Consensus       293 ~~  294 (339)
                      +.
T Consensus       190 ~~  191 (275)
T COG0702         190 PA  191 (275)
T ss_pred             Cc
Confidence            44

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.37  E-value=7.6e-06  Score=71.88  Aligned_cols=201  Identities=17%  Similarity=0.144  Sum_probs=130.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|-++-|.||||.+|+.++.+|++.|..|++-.|-.+.-   ..+++-...-.++.+...|+.|+++++++++     
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHHHHH-----
Confidence            36777899999999999999999999999999999865431   1222222122478999999999999999998     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        .-+++||-.|.-.+..-.+.      -++|+.++-.+++.+..     .+--+.|.+|+..+.              .
T Consensus       130 --~sNVVINLIGrd~eTknf~f------~Dvn~~~aerlAricke-----~GVerfIhvS~Lgan--------------v  182 (391)
T KOG2865|consen  130 --HSNVVINLIGRDYETKNFSF------EDVNVHIAERLARICKE-----AGVERFIHVSCLGAN--------------V  182 (391)
T ss_pred             --hCcEEEEeeccccccCCccc------ccccchHHHHHHHHHHh-----hChhheeehhhcccc--------------c
Confidence              56899999986543322222      35677777777665422     245678999987754              2


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh---------c---cCC---CHHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA---------G---NLR---TSEEG  282 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~---------~---~~~---~~~e~  282 (339)
                      ..-+-|=.||++-+--++   .++.    ....|.|.-+....- .........+.         +   ...   -..|+
T Consensus       183 ~s~Sr~LrsK~~gE~aVr---dafP----eAtIirPa~iyG~eD-rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DV  254 (391)
T KOG2865|consen  183 KSPSRMLRSKAAGEEAVR---DAFP----EATIIRPADIYGTED-RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDV  254 (391)
T ss_pred             cChHHHHHhhhhhHHHHH---hhCC----cceeechhhhcccch-hHHHHHHHHHHhcCceeeecCCcceeeccEEEehH
Confidence            344567778887765433   3342    355678877765321 11111111110         1   112   24689


Q ss_pred             HHHHHHHhccCCCCCCCcceee
Q 019551          283 ADTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      |..|+..+.+|..   .|..+-
T Consensus       255 aa~IvnAvkDp~s---~Gktye  273 (391)
T KOG2865|consen  255 AAAIVNAVKDPDS---MGKTYE  273 (391)
T ss_pred             HHHHHHhccCccc---cCceee
Confidence            9999999877643   454444

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.36  E-value=3.8e-06  Score=67.38  Aligned_cols=79  Identities=24%  Similarity=0.347  Sum_probs=59.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+++    ++..+.++..  .+   +.+...    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~--~~---~~~~~~----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL--ED---LEEALQ----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG--GG---HCHHHH----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH--HH---HHHHHh----
Confidence            588999999998 99999999999999996 999999999988887776    2234444443  22   223333    


Q ss_pred             CCCCccEEEEccccccC
Q 019551          137 KNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~  153 (339)
                         ..|++||+.+....
T Consensus        75 ---~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ---EADIVINATPSGMP   88 (135)
T ss_dssp             ---TESEEEE-SSTTST
T ss_pred             ---hCCeEEEecCCCCc
Confidence               68999999876543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.36  E-value=3e-06  Score=72.82  Aligned_cols=223  Identities=17%  Similarity=0.157  Sum_probs=138.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH-HHHHHHh---hcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET-ALSAIRS---KTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~-~~~~l~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .|++||||-+|-=|..+|+-|+.+||.|..+-|..+.... .++.+-.   .+.+......-.|++|...+.++++.+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4689999999999999999999999999988776554332 2222211   112345777889999999999999877  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         +++=+.|.|+..+-.  ++.+-.+-.-+|...|++.++.++...-..  ++-+.--.|+..-++. -...+.....+
T Consensus       106 ---kPtEiYnLaAQSHVk--vSFdlpeYTAeVdavGtLRlLdAi~~c~l~--~~VrfYQAstSElyGk-v~e~PQsE~TP  177 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVK--VSFDLPEYTAEVDAVGTLRLLDAIRACRLT--EKVRFYQASTSELYGK-VQEIPQSETTP  177 (376)
T ss_pred             ---CchhhhhhhhhcceE--EEeecccceeeccchhhhhHHHHHHhcCcc--cceeEEecccHhhccc-ccCCCcccCCC
Confidence               577777877765432  223333445567788999998877554222  2344444444433321 11112223467


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHH---cCCCeEEEEeeCCcccCCCccCcchhHHHH--------------HhccCCCH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMY---KEKGIGFYSMHPGWAETPGVAKSMPSFNER--------------FAGNLRTS  279 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~---~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--------------~~~~~~~~  279 (339)
                      +.+.++|+++|..-...+-.++..+   +-.||-+|.=+|---++=..+.......+.              ..+.|+-+
T Consensus       178 FyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  178 FYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             CCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence            8888999999987665554554443   345788887777533321111111111111              12457778


Q ss_pred             HHHHHHHHHHhccC
Q 019551          280 EEGADTVLWLALQP  293 (339)
Q Consensus       280 ~e~A~~v~~l~s~~  293 (339)
                      .|-.++++.++.++
T Consensus       258 ~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  258 GDYVEAMWLMLQQD  271 (376)
T ss_pred             HHHHHHHHHHHhcC
Confidence            88888888877643

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.27  E-value=4e-06  Score=78.11  Aligned_cols=78  Identities=26%  Similarity=0.340  Sum_probs=66.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +.+||.|| |+||+.+|..|+++| .+|.+++|+.+++.+..+..     ..++....+|+.|.+.+.++++       .
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~-------~   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIK-------D   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHh-------c
Confidence            57899999 999999999999999 89999999999887766543     2378999999999999988887       3


Q ss_pred             ccEEEEcccccc
Q 019551          141 VHVLVNNAGVLE  152 (339)
Q Consensus       141 id~lInnAG~~~  152 (339)
                      .|++||++....
T Consensus        69 ~d~VIn~~p~~~   80 (389)
T COG1748          69 FDLVINAAPPFV   80 (389)
T ss_pred             CCEEEEeCCchh
Confidence            499999987553

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.27  E-value=6e-05  Score=70.53  Aligned_cols=202  Identities=18%  Similarity=0.169  Sum_probs=116.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH-HHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKS-FANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~-~~~~~~~~  137 (339)
                      .+-.+|+|+||||++|+-+++.|.++|+.|.++.|+.++.+....   ....+.....+..|.....++.. +++.+   
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~---~~~~d~~~~~v~~~~~~~~d~~~~~~~~~---  150 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG---VFFVDLGLQNVEADVVTAIDILKKLVEAV---  150 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc---ccccccccceeeeccccccchhhhhhhhc---
Confidence            456789999999999999999999999999999999887766554   11112234444555555444332 22211   


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      .-...+++-++|.-....     +..--..|.+.|..++.+++...     +-.+++.+||.++....           .
T Consensus       151 ~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si~~~~~~-----------~  209 (411)
T KOG1203|consen  151 PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSIGGTKFN-----------Q  209 (411)
T ss_pred             cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEeecCcccC-----------C
Confidence            112456676766544322     12222345667888888887322     56789999988776321           1


Q ss_pred             cchHHH-----HHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-c--hhHHHHH--hcc--CCCHHHHHHH
Q 019551          218 DGMEQY-----ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-M--PSFNERF--AGN--LRTSEEGADT  285 (339)
Q Consensus       218 ~~~~~Y-----~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~--~~~~~~~--~~~--~~~~~e~A~~  285 (339)
                      +.+..+     ..+|.       ....++...|+.-..|.||....+..... .  ......+  ..+  ..+-.++|+.
T Consensus       210 ~~~~~~~~~~~~~~k~-------~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael  282 (411)
T KOG1203|consen  210 PPNILLLNGLVLKAKL-------KAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAEL  282 (411)
T ss_pred             CchhhhhhhhhhHHHH-------hHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHH
Confidence            112222     12222       22334556789999999998776422211 1  0111111  111  3455677777


Q ss_pred             HHHHhccCC
Q 019551          286 VLWLALQPK  294 (339)
Q Consensus       286 v~~l~s~~~  294 (339)
                      ++.++..+.
T Consensus       283 ~~~all~~~  291 (411)
T KOG1203|consen  283 VAKALLNEA  291 (411)
T ss_pred             HHHHHhhhh
Confidence            777665444

>PLN00106 malate dehydrogenase

Probab=98.22  E-value=4.6e-06  Score=76.57  Aligned_cols=162  Identities=14%  Similarity=0.098  Sum_probs=97.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ..++|.|||++|.+|..+|..|+..|.  .++++|+++.  +....++.....  ..  ...++++.+++.+.+.     
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~l~-----   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT--PA--QVRGFLGDDQLGDALK-----   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc--Cc--eEEEEeCCCCHHHHcC-----
Confidence            456899999999999999999997765  7999999872  221223332211  11  2224434434443333     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        ..|++|+.||.....    ...+++.+..|+.....+    .+.+.+....+.|+++|-..-...+..........++
T Consensus        86 --~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i----~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~  155 (323)
T PLN00106         86 --GADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTL----CEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY  155 (323)
T ss_pred             --CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC
Confidence              799999999986542    234666777887765444    4455555344444444433320000000011122456


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                      |....|+.++.-...|...+|.++.
T Consensus       156 p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        156 DPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CcceEEEEecchHHHHHHHHHHHhC
Confidence            6677888888777788888888876

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.18  E-value=6.5e-06  Score=74.35  Aligned_cols=84  Identities=23%  Similarity=0.317  Sum_probs=72.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHhhcCC--ccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLAS----RGATVYMVCRSKEKGETALSAIRSKTGN--ENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~----~G~~Vvl~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++|-||||..|.-+++++.+    .|..+.+.+||++++++..+++.+..+.  ....++.||.+|++++.+++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            479999999999999999998    7889999999999999999999887653  2344888999999999999985   


Q ss_pred             CCCCccEEEEccccccC
Q 019551          137 KNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~  153 (339)
                          -.++|||+|....
T Consensus        84 ----~~vivN~vGPyR~   96 (423)
T KOG2733|consen   84 ----ARVIVNCVGPYRF   96 (423)
T ss_pred             ----hEEEEecccccee
Confidence                4689999997653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.16  E-value=0.00015  Score=59.98  Aligned_cols=192  Identities=15%  Similarity=0.112  Sum_probs=117.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++-|.||||-.|..++++..++|+.|+.+.||++++...          ..+.+++.|+.|++++.+.+.       ..|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence            467889999999999999999999999999999875432          256788899999999866554       789


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++|..-|...+..    +.  ...        .-.++++..++.. ...|++.|+..+....... ..... .+..+-..
T Consensus        65 aVIsA~~~~~~~~----~~--~~~--------k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g-~rLvD-~p~fP~ey  127 (211)
T COG2910          65 AVISAFGAGASDN----DE--LHS--------KSIEALIEALKGA-GVPRLLVVGGAGSLEIDEG-TRLVD-TPDFPAEY  127 (211)
T ss_pred             eEEEeccCCCCCh----hH--HHH--------HHHHHHHHHHhhc-CCeeEEEEcCccceEEcCC-ceeec-CCCCchhH
Confidence            9998877654222    11  111        1145555555554 5678888887665532111 11111 12222334


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-HHH----h-ccCCCHHHHHHHHHHHhcc
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-ERF----A-GNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~----~-~~~~~~~e~A~~v~~l~s~  292 (339)
                      |..+++.-+ +.+.|..|   .++..+-|+|...--|.-+...-..- +.+    . ....+-+|-|-+++--+..
T Consensus       128 ~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~  199 (211)
T COG2910         128 KPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEK  199 (211)
T ss_pred             HHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhc
Confidence            555554433 33455544   45888899998877774332210000 000    0 1234677777777766643

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.14  E-value=3.7e-05  Score=70.59  Aligned_cols=162  Identities=11%  Similarity=0.065  Sum_probs=93.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.+++.|||++|.||..+|..|+..|  .+++++|++  +++....++.....  .  ....+.+|+.+..+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT--P--AKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc--C--ceEEEecCCCchHHHhC----
Confidence            445689999999999999999999665  579999993  22322223333221  2  22335555444333332    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc-cCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH-LTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~-~~~~~~~~~~  215 (339)
                         ..|++|++||.....    .+.+...+..|+...-.+    .+.|++. +..++|+++|....... ..........
T Consensus        76 ---gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i----~~~i~~~-~~~~iviv~SNPvdv~~~~~~~~~~~~s  143 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDL----VAAVASS-APKAIVGIVSNPVNSTVPIAAETLKKAG  143 (321)
T ss_pred             ---CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHH----HHHHHHH-CCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence               689999999985432    234566677887666544    4455555 45567777764322110 0000001224


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                      ++|....|+.+-.--..|-..++..+.
T Consensus       144 g~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        144 VYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             CCChhheeechhHHHHHHHHHHHHHhC
Confidence            556666777763222355666666654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.14  E-value=9.7e-06  Score=76.87  Aligned_cols=76  Identities=28%  Similarity=0.345  Sum_probs=60.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           64 CVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+|.|| |.+|+.+++.|++.+-  +|++.+|+.+++++..+++    ...++....+|+.|.+++.++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999874  8999999999988877665    24589999999999999988876       45


Q ss_pred             cEEEEccccc
Q 019551          142 HVLVNNAGVL  151 (339)
Q Consensus       142 d~lInnAG~~  151 (339)
                      |++||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999876

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.08  E-value=5.3e-06  Score=72.55  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             cCCCEEEEEcCC----------------CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC
Q 019551           59 IEGKNCVVTGAN----------------AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS  122 (339)
Q Consensus        59 l~~k~vlITGas----------------~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~  122 (339)
                      ++||+||||+|.                |.||.++|++|.++|++|+++++.......   .+   ........+..   
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s---   71 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEG---   71 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEec---
Confidence            468999999885                899999999999999999988864221000   00   00112233333   


Q ss_pred             CHHHHHHHHHHHhcCCCCccEEEEccccccC
Q 019551          123 SITEIKSFANRFSLKNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       123 ~~~~v~~~~~~~~~~~~~id~lInnAG~~~~  153 (339)
                       ..++.+.+.++... ..+|++||+|++...
T Consensus        72 -~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~  100 (229)
T PRK09620         72 -IIDLQDKMKSIITH-EKVDAVIMAAAGSDW  100 (229)
T ss_pred             -HHHHHHHHHHHhcc-cCCCEEEECccccce
Confidence             22222222322211 258999999998643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.08  E-value=1.3e-05  Score=77.51  Aligned_cols=79  Identities=25%  Similarity=0.317  Sum_probs=58.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.+.    .+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh------------
Confidence            36789999999877 99999999999999999999985 3444444444322    355677777651            


Q ss_pred             CCCCccEEEEccccccC
Q 019551          137 KNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~  153 (339)
                      ..+.+|+||+++|+...
T Consensus        65 ~~~~~d~vv~~~g~~~~   81 (450)
T PRK14106         65 FLEGVDLVVVSPGVPLD   81 (450)
T ss_pred             HhhcCCEEEECCCCCCC
Confidence            12478999999997543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.02  E-value=2.6e-05  Score=71.76  Aligned_cols=74  Identities=19%  Similarity=0.289  Sum_probs=54.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHC-C-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASR-G-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~-G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|+++||||+|.||..++++|+++ | .+|++++|+.+++.+..+++..           .|+.   ++.+.+    
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~---~l~~~l----  213 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL---SLEEAL----  213 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH---hHHHHH----
Confidence            578999999999999999999999864 6 4899999998877766554321           1222   222222    


Q ss_pred             cCCCCccEEEEcccccc
Q 019551          136 LKNKPVHVLVNNAGVLE  152 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~  152 (339)
                         ...|++|++++...
T Consensus       214 ---~~aDiVv~~ts~~~  227 (340)
T PRK14982        214 ---PEADIVVWVASMPK  227 (340)
T ss_pred             ---ccCCEEEECCcCCc
Confidence               36899999998765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.00  E-value=2.7e-05  Score=79.63  Aligned_cols=163  Identities=18%  Similarity=0.207  Sum_probs=119.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHH---HHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGE---TALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..|..+|+||-||.|.++|+-|.++|+ ++++++|+.-+--   ..++...+.  +..+.+-..|++..+..+.++++-.
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhh
Confidence            358899999999999999999999999 5899999864322   223333333  4567777778888888888877643


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                       +.+.+..++|-|.+..++..  .+++.++.+-+..+.|+.++-+.-...-.   .--.+|..||...-           
T Consensus      1845 -kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~---~LdyFv~FSSvscG----------- 1909 (2376)
T KOG1202|consen 1845 -KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP---ELDYFVVFSSVSCG----------- 1909 (2376)
T ss_pred             -hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc---ccceEEEEEeeccc-----------
Confidence             45788999999998877654  57888999888899999887665433322   12345555665433           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEM  240 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e  240 (339)
                       ++..+...|+-+..+++.+++.=+.+
T Consensus      1910 -RGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1910 -RGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             -CCCCcccccchhhHHHHHHHHHhhhc
Confidence             34578889999999999999875443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.87  E-value=0.00043  Score=63.13  Aligned_cols=149  Identities=17%  Similarity=0.249  Sum_probs=86.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+|+++++|.++++.+...|.+|+++++++++.+... ++    + ...   .+|..+.+..+.+.+..  ...
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g-~~~---~~~~~~~~~~~~~~~~~--~~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA----G-ADA---VFNYRAEDLADRILAAT--AGQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----C-CCE---EEeCCCcCHHHHHHHHc--CCC
Confidence            4789999999999999999999999999999999877655432 21    2 111   13445444444433322  123


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc-cccCCCCc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL-EFNSGSFD  218 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~-~~~~~~~~  218 (339)
                      .+|.+++|+|...         .               +.....+.   ..|+++.+++.... ....... ......+.
T Consensus       213 ~~d~vi~~~~~~~---------~---------------~~~~~~l~---~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~  264 (325)
T cd08253         213 GVDVIIEVLANVN---------L---------------AKDLDVLA---PGGRIVVYGSGGLR-GTIPINPLMAKEASIR  264 (325)
T ss_pred             ceEEEEECCchHH---------H---------------HHHHHhhC---CCCEEEEEeecCCc-CCCChhHHHhcCceEE
Confidence            6999999987311         1               11111222   35889888764311 0000000 01111233


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeE
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIG  247 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~  247 (339)
                      +...|..+|.....+.+.+...+....++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         265 GVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             eeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            34467777877777777777666554443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.86  E-value=5.2e-05  Score=64.83  Aligned_cols=171  Identities=18%  Similarity=0.202  Sum_probs=106.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ....+||||+-|-+|..+|+.|-.+ |. +|++.+-.....     ...+     .-.++-.|+-|...+++++-.    
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~-----~GPyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTD-----VGPYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhcc-----cCCchhhhhhccccHHHhhcc----
Confidence            4568999999999999999998865 66 577766433211     1111     112556788888887776542    


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                       .+||.|||-.+......   +...--..+||+.|.-++++.+..+      +-+|..-|..+++++...-..-.+-.-.
T Consensus       109 -~RIdWL~HfSALLSAvG---E~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAVG---ETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             -cccceeeeHHHHHHHhc---ccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCCCeeee
Confidence             48999999876554222   2334445789999999988866433      3455555556666542110000000111


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEe-eCCccc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSM-HPGWAE  257 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v-~PG~v~  257 (339)
                      .+...|+.||.-.+.+.+.+...+   |+.+-++ .||.+.
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence            234579999999999888887765   5555555 355554

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.85  E-value=0.00014  Score=67.23  Aligned_cols=116  Identities=18%  Similarity=0.156  Sum_probs=69.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC-------CEEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRG-------ATVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G-------~~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||||+|.+|.+++..|+..|       ..|+++++++.  +++....++...     ......|+....+..+.+  
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~~~~l--   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDPEEAF--   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCHHHHh--
Confidence            58999999999999999999854       58999999653  222211111110     001111333223322222  


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                           ...|++||.||...... .+   -++.++.|+.    +.+.+.+.+.+.. +.+.++.+|.
T Consensus        77 -----~~aDiVI~tAG~~~~~~-~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          77 -----KDVDVAILVGAMPRKEG-ME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -----CCCCEEEEeCCcCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence                 37999999999865422 12   2444555643    4566666666663 4677777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.80  E-value=0.00054  Score=55.27  Aligned_cols=114  Identities=22%  Similarity=0.296  Sum_probs=77.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC--ccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN--ENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|+|++|.+|.++|..|...|.  +++++++++++++....++......  ....+..   .+.+++           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            578999999999999999999864  7999999998888877777654322  2233333   334433           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..||...... .+   -.+.++.|.    .+.+.+.+.+.+..+.+.++.++.
T Consensus        68 ~~aDivvitag~~~~~g-~s---R~~ll~~N~----~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKPG-MS---RLDLLEANA----KIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSSTT-SS---HHHHHHHHH----HHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccccEEEEecccccccc-cc---HHHHHHHhH----hHHHHHHHHHHHhCCccEEEEeCC
Confidence            26899999999864322 22   233345454    455666666666656787777764

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.77  E-value=0.00014  Score=59.54  Aligned_cols=76  Identities=24%  Similarity=0.302  Sum_probs=55.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++++++|+|+ |++|.++++.|.+.| .+|++.+|++++.++..+++....       +..+..+.++.          
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~----------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc----------
Confidence            45789999998 899999999999996 789999999888777666553221       12233443332          


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                      ....|++|++.+...
T Consensus        79 ~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 LAEADLIINTTPVGM   93 (155)
T ss_pred             cccCCEEEeCcCCCC
Confidence            247899999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.75  E-value=0.00024  Score=58.28  Aligned_cols=158  Identities=16%  Similarity=0.138  Sum_probs=99.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++.++|.||||-.|..+.+++++.+-  +|+++.|.+.--.+         .+..+.....|++..++....+    
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a---------t~k~v~q~~vDf~Kl~~~a~~~----   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA---------TDKVVAQVEVDFSKLSQLATNE----   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc---------ccceeeeEEechHHHHHHHhhh----
Confidence            36788999999999999999999999984  79999987421110         1234556667777666554333    


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                         ..+|+++++-|......-  .+.+   +.+..-=.+.+.+     |.+.++-..++.+||.++...           
T Consensus        82 ---qg~dV~FcaLgTTRgkaG--adgf---ykvDhDyvl~~A~-----~AKe~Gck~fvLvSS~GAd~s-----------  137 (238)
T KOG4039|consen   82 ---QGPDVLFCALGTTRGKAG--ADGF---YKVDHDYVLQLAQ-----AAKEKGCKTFVLVSSAGADPS-----------  137 (238)
T ss_pred             ---cCCceEEEeecccccccc--cCce---EeechHHHHHHHH-----HHHhCCCeEEEEEeccCCCcc-----------
Confidence               489999999886543221  1111   1222111222333     334334457899999877522           


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                         ...-|-..|.-++.=+..|-.+      ++....||++..+-.
T Consensus       138 ---SrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  138 ---SRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERT  174 (238)
T ss_pred             ---cceeeeeccchhhhhhhhcccc------EEEEecCcceecccc
Confidence               2335777888777755544322      677889999976543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.71  E-value=0.00051  Score=63.01  Aligned_cols=114  Identities=20%  Similarity=0.276  Sum_probs=76.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++.|.|+ |++|.++|..|+..|  .+|++++|++++++....++.....  .....+..   .+.+++          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHHh----------
Confidence            35788896 899999999999999  5899999999988888877765431  11222222   222222          


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                       ..-|++|+++|...... .+.   ...++.|    .-+.+...+.+.+..+.+.++++|-
T Consensus        67 -~~aDIVIitag~~~~~g-~~R---~dll~~N----~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          67 -KDADIVVITAGAPQKPG-ETR---LDLLEKN----AKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             -CCCCEEEEccCCCCCCC-CCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence             36899999999865322 122   2334444    3455666667777667788888875

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.71  E-value=9.7e-05  Score=66.78  Aligned_cols=48  Identities=27%  Similarity=0.377  Sum_probs=42.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIR  106 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~  106 (339)
                      ++.+|+++|+|+ ||+|++++..|++.| .+|++++|+.+++++..+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            367899999997 899999999999999 689999999988887776654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.70  E-value=0.00014  Score=61.45  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=49.1

Q ss_pred             cCCCEEEEEcC----------------CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC
Q 019551           59 IEGKNCVVTGA----------------NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS  122 (339)
Q Consensus        59 l~~k~vlITGa----------------s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~  122 (339)
                      ++||+||||+|                ||..|.++|+.+..+|++|+++..... +.          +...+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~----------~p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP----------PPPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc----------ccccceEE--Eec
Confidence            46888888876                467999999999999999999987642 11          01234444  466


Q ss_pred             CHHHHHHHHHHHhcCCCCccEEEEccccccC
Q 019551          123 SITEIKSFANRFSLKNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       123 ~~~~v~~~~~~~~~~~~~id~lInnAG~~~~  153 (339)
                      +.+++.+.+.+..   ..-|++|++|++...
T Consensus        68 sa~em~~~~~~~~---~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   68 SAEEMLEAVKELL---PSADIIIMAAAVSDF   95 (185)
T ss_dssp             SHHHHHHHHHHHG---GGGSEEEE-SB--SE
T ss_pred             chhhhhhhhcccc---CcceeEEEecchhhe
Confidence            6777666666554   334999999998753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.66  E-value=0.00039  Score=64.52  Aligned_cols=83  Identities=20%  Similarity=0.378  Sum_probs=65.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCccE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---------------------EKGETALSAIRSKTGNENV  114 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---------------------~~~~~~~~~l~~~~~~~~~  114 (339)
                      .++++++|+|.|+ ||+|.++|+.|+..|. ++.++|++.                     .|.+.+.+.+.+.++..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            3578899999998 8899999999999998 899999863                     3666777888888887788


Q ss_pred             EEEeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       115 ~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..+..|++ .+.++++++       ..|++|.+.
T Consensus        99 ~~~~~~~~-~~~~~~~~~-------~~DlVid~~  124 (338)
T PRK12475         99 VPVVTDVT-VEELEELVK-------EVDLIIDAT  124 (338)
T ss_pred             EEEeccCC-HHHHHHHhc-------CCCEEEEcC
Confidence            88888876 344544433       578888766

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.64  E-value=0.00029  Score=63.46  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=55.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ..+|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++... +  .+.....|     +.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~--~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G--EIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C--ceEEechh-----hh---------cc
Confidence            35789999999 69999999999999999999999998888777766432 1  12222111     10         11


Q ss_pred             CCccEEEEcccccc
Q 019551          139 KPVHVLVNNAGVLE  152 (339)
Q Consensus       139 ~~id~lInnAG~~~  152 (339)
                      ...|++||+.+...
T Consensus       177 ~~~DivInatp~gm  190 (270)
T TIGR00507       177 HRVDLIINATSAGM  190 (270)
T ss_pred             cCccEEEECCCCCC
Confidence            36899999987653

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.62  E-value=0.00051  Score=59.03  Aligned_cols=83  Identities=22%  Similarity=0.320  Sum_probs=63.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++.+++|+|.|+ ||+|.++|+.|+..|. ++.++|++                   ..+.+.+.+++.+.++..++..
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4588899999996 8999999999999998 89999987                   3566777778888777767776


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +..++.+ +.+.++++       ..|++|.+.
T Consensus        96 ~~~~i~~-~~~~~~~~-------~~D~Vi~~~  119 (202)
T TIGR02356        96 LKERVTA-ENLELLIN-------NVDLVLDCT  119 (202)
T ss_pred             ehhcCCH-HHHHHHHh-------CCCEEEECC
Confidence            6655543 34443333       678888776

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.61  E-value=9.1e-05  Score=71.62  Aligned_cols=80  Identities=20%  Similarity=0.249  Sum_probs=54.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||+++|||+++ +|.++|+.|++.|++|++.+++........+++.+.    .+.+...+  +...+   .+      
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~----g~~~~~~~--~~~~~---~~------   66 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE----GIKVICGS--HPLEL---LD------   66 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc----CCEEEeCC--CCHHH---hc------
Confidence            6789999999975 999999999999999999998765444444444332    12232221  11221   11      


Q ss_pred             CCccEEEEccccccCC
Q 019551          139 KPVHVLVNNAGVLENN  154 (339)
Q Consensus       139 ~~id~lInnAG~~~~~  154 (339)
                      ..+|+||+++|+....
T Consensus        67 ~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             CcCCEEEECCCCCCCC
Confidence            1489999999987654

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.58  E-value=0.0018  Score=59.63  Aligned_cols=79  Identities=27%  Similarity=0.351  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+ .+    .+ ..   ...|..+.+..+.+.+...  .+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~----~~-~~---~~~~~~~~~~~~~~~~~~~--~~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE----LG-AD---YVIDYRKEDFVREVRELTG--KR  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cC-CC---eEEecCChHHHHHHHHHhC--CC
Confidence            478999999999999999999999999999999988765543 22    11 11   1235566555555444332  23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++++|+|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.57  E-value=0.002  Score=56.46  Aligned_cols=83  Identities=19%  Similarity=0.200  Sum_probs=60.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|.++++.|+..|. +++++|.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            477889999988 8999999999999998 788988642                   3566667777777776677766


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ...++ ++....++.      ...|++|.+.
T Consensus        87 ~~~i~-~~~~~~l~~------~~~D~Vvdai  110 (231)
T cd00755          87 EEFLT-PDNSEDLLG------GDPDFVVDAI  110 (231)
T ss_pred             eeecC-HhHHHHHhc------CCCCEEEEcC
Confidence            65554 333333332      2578888775

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00704 MDH Malate dehydrogenase

Probab=97.57  E-value=0.00064  Score=62.68  Aligned_cols=112  Identities=20%  Similarity=0.145  Sum_probs=68.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHH--H--H
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEI--K--S  129 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v--~--~  129 (339)
                      ++.||||+|.+|..++..|+..|.       .++++|+++  +.++..                ..|+.+....  .  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~----------------~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV----------------VMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee----------------eeehhhhcccccCCcE
Confidence            579999999999999999998663       499999987  433322                2333332100  0  0


Q ss_pred             HHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                      +.....+.....|++|+.||...... .+   -.+.+..|    .-+.+.+.+.+.+.. +.+.++.+|-
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g-~t---R~dll~~N----~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPG-ME---RADLLRKN----AKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcC-Cc---HHHHHHHh----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            00001111237899999999864322 22   23334444    346677777787773 6777887763

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.00044  Score=62.67  Aligned_cols=51  Identities=18%  Similarity=0.219  Sum_probs=44.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG  110 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~  110 (339)
                      +.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.++..+++...++
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~  176 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFP  176 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCC
Confidence            56889999998 8899999999999998 799999999999988888765543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.47  E-value=0.00081  Score=61.78  Aligned_cols=116  Identities=19%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHH-C--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLAS-R--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~-~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++|.||+|+||.+++..|.. .  +..+++.+|++. .+...-.+...  .....+..++-.+   +.+.+       
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~i~~~~~~d---~~~~l-------   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGED---PTPAL-------   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCceEEEeCCCC---HHHHc-------
Confidence            3689999999999999998865 2  457889998753 21111122211  1111111112122   21111       


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ...|++|.++|.......    .-...+..|...    ++.+.+.|.+....+.|+++|-
T Consensus        68 ~~~DiVIitaG~~~~~~~----~R~dll~~N~~i----~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         68 EGADVVLISAGVARKPGM----DRSDLFNVNAGI----VKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CCCCEEEEcCCCCCCCCC----CHHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccC
Confidence            259999999998754321    223345556544    4555566666644444444443

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.46  E-value=0.0007  Score=62.37  Aligned_cols=161  Identities=12%  Similarity=0.026  Sum_probs=100.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCchh--HHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKEK--GETALSAIRSKT-GN-ENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~~~--~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +++.|+|++|.+|..+|..|+..|.       .++++|.+++.  ++....++.... +- .++.+.   -.+.+++   
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~~~~~---   76 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDPNVAF---   76 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCcHHHh---
Confidence            4789999999999999999998876       69999995433  454444444321 10 112211   1122222   


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                              ..-|++|.+||...... .+   -.+.+..|+    -+.+.+.+.+.+.. +.+.++++|-..-...    .
T Consensus        77 --------~daDivvitaG~~~k~g-~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t----~  136 (322)
T cd01338          77 --------KDADWALLVGAKPRGPG-ME---RADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNA----L  136 (322)
T ss_pred             --------CCCCEEEEeCCCCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHH----H
Confidence                    36899999999864322 22   223344443    46677777777776 3778888774221100    0


Q ss_pred             ccccCC-CCcchHHHHHhHHHHHHHHHHHHHHHcC--CCeEE
Q 019551          210 LEFNSG-SFDGMEQYARNKRVQVALTEKWSEMYKE--KGIGF  248 (339)
Q Consensus       210 ~~~~~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~~--~gI~v  248 (339)
                      ...... ++|....|+.++..-..|...++..+.-  ..|+.
T Consensus       137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            011123 3777788999999999999999998763  34553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.46  E-value=0.0014  Score=52.34  Aligned_cols=79  Identities=20%  Similarity=0.332  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEecc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLELCD  120 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D  120 (339)
                      +++++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468899887 8999999999999998 79998863                   34777888888888888888888888


Q ss_pred             CCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          121 LSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       121 l~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      + +.+...++++       ..|++|.+.
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~  100 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCV  100 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEES
T ss_pred             c-cccccccccc-------CCCEEEEec
Confidence            8 4455555553       578898875

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.44  E-value=0.0011  Score=61.19  Aligned_cols=114  Identities=19%  Similarity=0.126  Sum_probs=70.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH--HH--
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKS--FA--  131 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~--~~--  131 (339)
                      ++.|+||+|.+|..+|..|+..|.       .++++|++++..              .......|+.+......  ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence            378999999999999999998654       599999975420              12223344444431110  00  


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                      ....+.....|++|+.||.....    .+...+.+..|+    .+.+.+.+.+.+.. +.+.|+.+|.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            00011224789999999986432    233455566564    45677777777763 6688888774

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.43  E-value=0.0024  Score=58.70  Aligned_cols=116  Identities=18%  Similarity=0.193  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++.|+|+ |++|.++|..|+..|.  .++++++++++++....++....+- .++.+..   .+.+++         
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~~~---------   71 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYSDC---------   71 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHHHh---------
Confidence            4679999998 9999999999999987  7999999999888888877755321 1222222   232222         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ..-|++|..||...... .+.   ...++.|.    .+.+.+.+.+.+....+.++++|-
T Consensus        72 --~~adivIitag~~~k~g-~~R---~dll~~N~----~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         72 --KDADLVVITAGAPQKPG-ETR---LDLVEKNL----KIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             --CCCCEEEEecCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence              26899999999865322 222   23344454    344555666666656788888774

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.42  E-value=0.0027  Score=56.68  Aligned_cols=84  Identities=18%  Similarity=0.262  Sum_probs=56.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      .+.+++|+|.|+ ||+|.++|+.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            478889999987 8999999999999994 798888652                   2344555666666665555555


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEccc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG  149 (339)
                      . +.-+++.+.+++.      ...|++|.+..
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCC
Confidence            3 3333444443331      25777777664

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.40  E-value=0.0019  Score=57.19  Aligned_cols=83  Identities=19%  Similarity=0.271  Sum_probs=61.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|.+.+.+.+.+..+..++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3578899999999 9999999999999997 78888764                   2355666677777777777777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...++ .+.+.++++       ..|++|.+.
T Consensus       107 ~~~~i~-~~~~~~~~~-------~~DiVi~~~  130 (245)
T PRK05690        107 INARLD-DDELAALIA-------GHDLVLDCT  130 (245)
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEecC
Confidence            766654 333433333       678888776

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.39  E-value=0.0015  Score=60.69  Aligned_cols=83  Identities=22%  Similarity=0.361  Sum_probs=61.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCccE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---------------------EKGETALSAIRSKTGNENV  114 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---------------------~~~~~~~~~l~~~~~~~~~  114 (339)
                      .++.+++|+|.|+ ||+|..+|+.|+..|. +|.++|++.                     .+.+.+.+.+.+..+..++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            3578899999999 8999999999999999 899999863                     3555556677766676677


Q ss_pred             EEEeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       115 ~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..+..|++. +.+.++++       ..|++|.+.
T Consensus        99 ~~~~~~~~~-~~~~~~~~-------~~DlVid~~  124 (339)
T PRK07688         99 EAIVQDVTA-EELEELVT-------GVDLIIDAT  124 (339)
T ss_pred             EEEeccCCH-HHHHHHHc-------CCCEEEEcC
Confidence            777777753 34444332       568888774

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.39  E-value=0.0016  Score=57.07  Aligned_cols=84  Identities=19%  Similarity=0.292  Sum_probs=62.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++.+++|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..|.+.+.+.+.+.+|..++..
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            3578899999996 8999999999999998 68887643                   3466777788888877777777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEccc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG  149 (339)
                      +..+++ .+.+.++++       ..|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            776663 344444443       5889988764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.36  E-value=0.0014  Score=61.89  Aligned_cols=83  Identities=23%  Similarity=0.313  Sum_probs=62.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++.+++|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..+.+.+.+.+.+.++..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            477889999976 8999999999999998 79999987                   45777777888877776666666


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEccc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG  149 (339)
                      ...+.+ +.+.++++       ..|++|++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            555543 33444333       5788888764

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.35  E-value=0.0012  Score=59.73  Aligned_cols=80  Identities=21%  Similarity=0.259  Sum_probs=56.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++|+++|.|| ||-|++++..|++.|+ +|.+++|+.++.+++.+.+...++...+.  ..|.   .+.....      
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~~~------  192 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIEDVI------  192 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHHHH------
Confidence            56789999998 9999999999999997 79999999999888887765443321121  1222   2222111      


Q ss_pred             CCCccEEEEccccc
Q 019551          138 NKPVHVLVNNAGVL  151 (339)
Q Consensus       138 ~~~id~lInnAG~~  151 (339)
                       ...|+|||+..+.
T Consensus       193 -~~~divINaTp~G  205 (283)
T PRK14027        193 -AAADGVVNATPMG  205 (283)
T ss_pred             -hhcCEEEEcCCCC
Confidence             2579999987543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.30  E-value=0.0011  Score=59.63  Aligned_cols=78  Identities=26%  Similarity=0.379  Sum_probs=57.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+|++++|.|| ||-+++++..|++.|. +|+++.|+.++++++.+.+.+...    .....+..+.+...         
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~----~~~~~~~~~~~~~~---------  189 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA----AVEAAALADLEGLE---------  189 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc----cccccccccccccc---------
Confidence            46899999998 8999999999999996 799999999999888887765432    11112222222211         


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                        ..|+|||+.....
T Consensus       190 --~~dliINaTp~Gm  202 (283)
T COG0169         190 --EADLLINATPVGM  202 (283)
T ss_pred             --ccCEEEECCCCCC
Confidence              4799999976544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.30  E-value=0.0022  Score=55.52  Aligned_cols=83  Identities=17%  Similarity=0.209  Sum_probs=59.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      .++.+++|+|.|+ ||+|..+|+.|+..|. +++++|.+.                  .+.+.+.+.+.+..+..++..+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~  102 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH  102 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            3578899999997 8999999999999998 599998862                  3555666666666666666666


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ...+++ +.+.+++       ...|++|.+.
T Consensus       103 ~~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        103 NEKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eeecCH-HHHHHHH-------cCCCEEEECC
Confidence            655554 3333333       2577877663

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.29  E-value=0.0042  Score=60.56  Aligned_cols=112  Identities=22%  Similarity=0.258  Sum_probs=70.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-------------H
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-------------T  125 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-------------~  125 (339)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++++.+.+ +    + .+  ++..|..+.             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l----G-A~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M----G-AE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----C-Ce--EEEeccccccccccchhhhcchh
Confidence            45889999998 899999999999999999999999887664432 2    2 22  222232221             1


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..+...+.+.+..+..|++|.++|+.....                 +..+++..+..|+   ++++||.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mk---pGgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMK---PGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcC---CCCEEEEEccC
Confidence            111112222233356999999999854221                 1123355555555   56889988863

>PRK08223 hypothetical protein; Validated

Probab=97.27  E-value=0.0019  Score=58.13  Aligned_cols=65  Identities=15%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .|.+.+.+.+.+.++..++..
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~  101 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA  101 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4588899999998 8999999999999998 788888752                   344555555555555555555


Q ss_pred             EeccCC
Q 019551          117 ELCDLS  122 (339)
Q Consensus       117 ~~~Dl~  122 (339)
                      +...++
T Consensus       102 ~~~~l~  107 (287)
T PRK08223        102 FPEGIG  107 (287)
T ss_pred             EecccC
Confidence            555554

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.25  E-value=0.00056  Score=67.37  Aligned_cols=47  Identities=36%  Similarity=0.498  Sum_probs=41.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            367899999999 69999999999999999999999988877766554

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.25  E-value=0.0012  Score=62.84  Aligned_cols=76  Identities=22%  Similarity=0.350  Sum_probs=55.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.||+++|.|+ ||+|+.+++.|++.|+ +|+++.|+.++.++..+++    +.  ...+     ..++..+.+     
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~--~~~~-----~~~~l~~~l-----  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RN--ASAH-----YLSELPQLI-----  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cC--CeEe-----cHHHHHHHh-----
Confidence            477899999999 9999999999999996 7999999988876665553    21  1111     123333322     


Q ss_pred             CCCCccEEEEcccccc
Q 019551          137 KNKPVHVLVNNAGVLE  152 (339)
Q Consensus       137 ~~~~id~lInnAG~~~  152 (339)
                        ...|++||+.+...
T Consensus       241 --~~aDiVI~aT~a~~  254 (414)
T PRK13940        241 --KKADIIIAAVNVLE  254 (414)
T ss_pred             --ccCCEEEECcCCCC
Confidence              36899999998654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.24  E-value=0.0014  Score=59.29  Aligned_cols=79  Identities=22%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+++...   ..+..    +...+++..       .
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~~----~~~~~~~~~-------~  187 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVITR----LEGDSGGLA-------I  187 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Cccee----ccchhhhhh-------c
Confidence            56899999987 9999999999999997 7999999999888877665322   11111    111122211       1


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                      ....|+|||+.....
T Consensus       188 ~~~~DiVInaTp~g~  202 (282)
T TIGR01809       188 EKAAEVLVSTVPADV  202 (282)
T ss_pred             ccCCCEEEECCCCCC
Confidence            136899999986643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.24  E-value=0.00037  Score=59.76  Aligned_cols=46  Identities=30%  Similarity=0.413  Sum_probs=39.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      +++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++++++++..++
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            4789999999995 899999999999999999999998776655543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.24  E-value=0.0048  Score=70.65  Aligned_cols=185  Identities=12%  Similarity=0.024  Sum_probs=111.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.++.++|++.+++++.+++.+|.++|+.|+++..... ..   .... .. +..+..+.+.-.|.+++..+++.+....
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~---~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VS---HSAS-PL-ASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cc---cccc-cc-ccccccccccccchHHHHHHHHhhhccc
Confidence            45788899888999999999999999999887742211 00   0000 00 1122233445556677888888887777


Q ss_pred             CCccEEEEccccccCCCC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          139 KPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      +.++.+||..+....... .+.......-...+...|.+.|.+-+.+... +.+.++.++...+..+....+...   +.
T Consensus      1827 ~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-~~~~~~~vsr~~G~~g~~~~~~~~---~~ 1902 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-ARASFVTVSRIDGGFGYSNGDADS---GT 1902 (2582)
T ss_pred             cccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-CCeEEEEEEecCCccccCCccccc---cc
Confidence            889999997765432110 1101111111234455677888776665543 457788888876553321111000   00


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPG  254 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG  254 (339)
                      .+ ..-....+++.+|+|+++.|+....+|...+.|.
T Consensus      1903 ~~-~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1903 QQ-VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cc-cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            00 0012347899999999999998777777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.23  E-value=0.0032  Score=55.59  Aligned_cols=83  Identities=17%  Similarity=0.278  Sum_probs=57.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      ..+++++|+|.|+ ||+|..+|+.|+..|. +++++|.+.                   .|.+.+.+.+.+.++..++..
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~   98 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINP   98 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3578899999988 8999999999999997 788888742                   345555666666666666665


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...++. +.+.++++       ..|++|.+.
T Consensus        99 ~~~~i~~-~~~~~~~~-------~~DlVvd~~  122 (240)
T TIGR02355        99 INAKLDD-AELAALIA-------EHDIVVDCT  122 (240)
T ss_pred             EeccCCH-HHHHHHhh-------cCCEEEEcC
Confidence            5544432 33333332       567777665

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.21  E-value=0.0017  Score=60.26  Aligned_cols=80  Identities=16%  Similarity=0.281  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||++++|..+++.+...|++|+.+++++++.+.+.+++    +...  +  .|..+.++..+.+.+...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l----Ga~~--v--i~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL----GFDD--A--FNYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCce--e--EEcCCcccHHHHHHHhCC--C
Confidence            4889999999999999999888888999999999887755444322    2111  1  232222233333333322  4


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6999998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.20  E-value=0.0034  Score=58.73  Aligned_cols=83  Identities=18%  Similarity=0.237  Sum_probs=63.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .|.+.+.+.+.+.+|..++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3578899999998 8999999999999998 788988752                   577778888888888777777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +..+++. +...++++       ..|++|.+.
T Consensus       103 ~~~~i~~-~~~~~~~~-------~~DvVvd~~  126 (355)
T PRK05597        103 SVRRLTW-SNALDELR-------DADVILDGS  126 (355)
T ss_pred             EEeecCH-HHHHHHHh-------CCCEEEECC
Confidence            7666653 33333333       567777765

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.20  E-value=0.002  Score=55.15  Aligned_cols=37  Identities=24%  Similarity=0.392  Sum_probs=33.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS   94 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~   94 (339)
                      .++..++|+|.|+ ||+|..+|+.|++.|. +|+++|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4578899999998 8999999999999999 79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06849 hypothetical protein; Provisional

Probab=97.18  E-value=0.0036  Score=59.40  Aligned_cols=83  Identities=14%  Similarity=0.055  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +.|+|||||++..+|..+|+.|.+.|++|++++.++.........+      .....+...-.+.+...+.+.++.+++ 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            3689999999999999999999999999999998865443222111      122222222234444333333444443 


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            4899988765

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.14  E-value=0.0013  Score=59.43  Aligned_cols=78  Identities=21%  Similarity=0.216  Sum_probs=63.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ...+|-||+|..|.-+|++|+.+|.+-.+.+||..++..+.+++-     .....+.++  ++..+++.++       ..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG-----~~~~~~p~~--~p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG-----PEAAVFPLG--VPAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC-----ccccccCCC--CHHHHHHHHh-------cc
Confidence            467999999999999999999999999999999999998887763     233334443  4777777766       67


Q ss_pred             cEEEEccccccC
Q 019551          142 HVLVNNAGVLEN  153 (339)
Q Consensus       142 d~lInnAG~~~~  153 (339)
                      ++|+||+|....
T Consensus        73 ~VVlncvGPyt~   84 (382)
T COG3268          73 QVVLNCVGPYTR   84 (382)
T ss_pred             eEEEeccccccc
Confidence            899999997653

>PRK08328 hypothetical protein; Provisional

Probab=97.13  E-value=0.0049  Score=54.07  Aligned_cols=38  Identities=21%  Similarity=0.411  Sum_probs=33.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK   95 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~   95 (339)
                      .++.+++|+|.|+ ||+|.++++.|+..|. +++++|.+.
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3578899999998 7999999999999998 688988653

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.10  E-value=0.0087  Score=52.97  Aligned_cols=78  Identities=26%  Similarity=0.335  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+|+++ +|.++++.+...|.+|+++++++++.+.+ +++    +. . .  ..|..+.+....+.   ....+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~-~-~--~~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL----GA-D-H--VIDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh----CC-c-e--eccCCcCCHHHHHH---HhcCC
Confidence            478999999988 99999999999999999999987664433 221    11 1 1  12333333333332   22335


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+++|.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.08  E-value=0.0047  Score=58.12  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|++++++...+.    ++. .   +..+..+.+++.+.+.      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~----~g~-~---v~~~~~~~~~l~~~l~------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE----FGG-R---IHTRYSNAYEIEDAVK------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh----cCc-e---eEeccCCHHHHHHHHc------
Confidence            45677999988 7999999999999999999999998776544332    221 1   2234555555544433      


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                       ..|++|+++++.
T Consensus       230 -~aDvVI~a~~~~  241 (370)
T TIGR00518       230 -RADLLIGAVLIP  241 (370)
T ss_pred             -cCCEEEEccccC
Confidence             579999998664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.07  E-value=0.0035  Score=56.84  Aligned_cols=47  Identities=28%  Similarity=0.336  Sum_probs=38.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKE---KGETALSAIR  106 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~---~~~~~~~~l~  106 (339)
                      +++|+++|.|+ ||-+++++-.|+..|+ +|.+++|+++   +.+++.+++.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            57899999997 7779999999999997 7999999954   6666655554

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.07  E-value=0.005  Score=57.86  Aligned_cols=83  Identities=22%  Similarity=0.338  Sum_probs=61.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++.+++|+|.|+ ||+|..+++.|+..|. +++++|.+                   ..|.+.+.+.+.+.++..++..
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3578899999988 8999999999999997 89998875                   3466677777777777667777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...++ .+.+.++++       ..|++|.|.
T Consensus       116 ~~~~i~-~~~~~~~~~-------~~DlVid~~  139 (370)
T PRK05600        116 LRERLT-AENAVELLN-------GVDLVLDGS  139 (370)
T ss_pred             eeeecC-HHHHHHHHh-------CCCEEEECC
Confidence            766664 333444433       567777665

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.07  E-value=0.0053  Score=51.41  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=51.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSK------------------EKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      |+|.|+ ||+|.++++.|++.|. +++++|.+.                  .+.+.+.+.+.+..+..++..+...+.. 
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~-   79 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE-   79 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence            678886 8999999999999998 699999874                  3445555566666665566555555443 


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEcc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +.+.+++       ...|++|.+.
T Consensus        80 ~~~~~~l-------~~~DlVi~~~   96 (174)
T cd01487          80 NNLEGLF-------GDCDIVVEAF   96 (174)
T ss_pred             hhHHHHh-------cCCCEEEECC
Confidence            2333332       2567777653

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.06  E-value=0.0028  Score=59.26  Aligned_cols=80  Identities=15%  Similarity=0.263  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+|++|..+++.+...|++|+.+++++++.+.+.+++    +...  +  .|..+.+++.+.+.+..  .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l----Ga~~--v--i~~~~~~~~~~~i~~~~--~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFDE--A--FNYKEEPDLDAALKRYF--PE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc----CCCE--E--EECCCcccHHHHHHHHC--CC
Confidence            4789999999999999999888888999999998887755443232    2111  1  23322223333333332  23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++.+.|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6999999887

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.02  E-value=0.0035  Score=58.18  Aligned_cols=78  Identities=22%  Similarity=0.287  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      |++++|+||+|++|.++++.....|+ +|+.+++++++.+.+.+++    +...  +  .|..+ +++.+.+.++..  +
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l----Ga~~--v--i~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL----GFDA--A--INYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc----CCcE--E--EECCC-CCHHHHHHHHCC--C
Confidence            48999999999999999888778899 8999999887665544432    2211  1  12222 223333333322  4


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus       224 gvd~vid~~g  233 (345)
T cd08293         224 GVDVYFDNVG  233 (345)
T ss_pred             CceEEEECCC
Confidence            6999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.01  E-value=0.017  Score=53.35  Aligned_cols=118  Identities=23%  Similarity=0.239  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +.+++.|.|| |.+|..++..++..| +.|+++|++++.++....++.....  +....+..  -+|.+.+         
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~--~~d~~~l---------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG--TNNYEDI---------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe--CCCHHHh---------
Confidence            4568999997 889999999999999 6899999998765543333322111  11111111  1232221         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                        ..-|++|.++|...... .+   -.+.+..|.    -+.+.+.+.|.+..+.+.++++|-.
T Consensus        72 --~~ADiVVitag~~~~~g-~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         72 --KDSDVVVITAGVQRKEE-MT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             --CCCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCh
Confidence              25799999999754322 12   233455555    4567777777776567778887653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.01  E-value=0.0028  Score=58.62  Aligned_cols=77  Identities=30%  Similarity=0.412  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-CC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-NK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~  139 (339)
                      |+++||+||+||+|....+-....|++++++..+.++.+ ...++    +...+    .|..+.+    +.+++++. .+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l----GAd~v----i~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL----GADHV----INYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc----CCCEE----EcCCccc----HHHHHHHHcCC
Confidence            899999999999999988888888988777777666555 33332    22211    2333333    33333332 22


Q ss_pred             -CccEEEEcccc
Q 019551          140 -PVHVLVNNAGV  150 (339)
Q Consensus       140 -~id~lInnAG~  150 (339)
                       .+|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             59999988874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.00  E-value=0.0033  Score=54.92  Aligned_cols=75  Identities=20%  Similarity=0.337  Sum_probs=58.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +.++|.|+ |-+|..+|+.|.+.|++|++++++++..++...+      ...++.+.+|-++++.++++--      ...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi------~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGI------DDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCC------CcC
Confidence            35677777 7899999999999999999999999887664332      1357888899999998876521      367


Q ss_pred             cEEEEccc
Q 019551          142 HVLVNNAG  149 (339)
Q Consensus       142 d~lInnAG  149 (339)
                      |++|-..|
T Consensus        68 D~vva~t~   75 (225)
T COG0569          68 DAVVAATG   75 (225)
T ss_pred             CEEEEeeC
Confidence            88876655

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.00  E-value=0.0082  Score=55.09  Aligned_cols=116  Identities=20%  Similarity=0.276  Sum_probs=69.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCc--hhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSK--EKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~--~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.|+|++|.+|..++..|+..|.  .|++++|++  ++++....++.....  +....+...  +|.+.    +     
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~~----l-----   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLSD----V-----   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CCHHH----h-----
Confidence            689999999999999999999987  499999965  555444444432111  011111110  12221    1     


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                        ..-|++|.++|...... .+   -.+.++.|+    .+++.+.+.+.+..+.+.++++++.
T Consensus        71 --~~aDiViitag~p~~~~-~~---r~dl~~~n~----~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          71 --AGSDIVIITAGVPRKEG-MS---RLDLAKKNA----KIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             --CCCCEEEEecCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEeCCc
Confidence              37899999999864321 12   123344444    3445555556555567788888874

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.99  E-value=0.0034  Score=56.93  Aligned_cols=42  Identities=29%  Similarity=0.404  Sum_probs=37.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET  100 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~  100 (339)
                      ++.||+++|.|. |++|+++|+.|...|++|++.+|++++.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            377999999999 779999999999999999999999875443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.98  E-value=0.0039  Score=56.62  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+ +++    + ..   ...|..+.+....+.+ ... .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g-~~---~~~~~~~~~~~~~~~~-~~~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----G-AD---VAINYRTEDFAEEVKE-ATG-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----C-CC---EEEeCCchhHHHHHHH-HhC-CC
Confidence            478999999999999999999999999999999987765544 222    2 11   1233343333333322 222 24


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|.+++|+|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.98  E-value=0.0039  Score=57.46  Aligned_cols=79  Identities=18%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+++|+||++++|..+++.+...|++|+.+++++++.+.+ +++    +. .. +  .|..+.+...+......  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l----Ga-~~-v--i~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL----GF-DV-A--FNYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CC-CE-E--EeccccccHHHHHHHhC--CC
Confidence            478999999999999999888888899999999987765544 222    22 11 1  23333223333333332  23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6999998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.93  E-value=0.0052  Score=56.44  Aligned_cols=41  Identities=37%  Similarity=0.477  Sum_probs=36.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET  100 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~  100 (339)
                      .+++++|+||++++|+++++.+...|++|+++++++++.+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46899999999999999999999999999999988765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.91  E-value=0.01  Score=47.80  Aligned_cols=78  Identities=21%  Similarity=0.256  Sum_probs=54.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEeccCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLELCDLS  122 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~  122 (339)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3688887 8999999999999998 68888764                   2355566667777766666666666555


Q ss_pred             CHHHHHHHHHHHhcCCCCccEEEEccc
Q 019551          123 SITEIKSFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       123 ~~~~v~~~~~~~~~~~~~id~lInnAG  149 (339)
                      +... .+.       +.+.|++|.+..
T Consensus        80 ~~~~-~~~-------~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-DDF-------LDGVDLVIDAID   98 (143)
T ss_pred             hhhH-HHH-------hcCCCEEEECCC
Confidence            4322 111       236788887664

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.89  E-value=0.0072  Score=51.66  Aligned_cols=82  Identities=20%  Similarity=0.357  Sum_probs=58.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      ..+++++|+|.|+ +|+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.+|..++..
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~   95 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV   95 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence            3477889999986 6699999999999998 68888753                   2356666777888877777776


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...+++  ...+++       ...|++|.+.
T Consensus        96 ~~~~~~~--~~~~~~-------~~~dvVi~~~  118 (197)
T cd01492          96 DTDDISE--KPEEFF-------SQFDVVVATE  118 (197)
T ss_pred             EecCccc--cHHHHH-------hCCCEEEECC
Confidence            6655542  122222       2578888664

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.88  E-value=0.0072  Score=54.13  Aligned_cols=115  Identities=22%  Similarity=0.212  Sum_probs=73.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCC----CEEEEEecCchhHHHHHHHHHhhcCCc-cEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           64 CVVTGANAGIGYATAEGLASRG----ATVYMVCRSKEKGETALSAIRSKTGNE-NVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G----~~Vvl~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.|.||+|.+|..++..|+..|    .+|++.|+++++++....++....... ...+..   +  ++..+.+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~---~--~d~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI---T--DDPYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE---C--CchHHHh-------
Confidence            4689998899999999999999    689999999988888777776543211 111111   1  1122222       


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..+|........   . ...+    ....-+.+.+.+.+.+..+.+.++++|-
T Consensus        69 ~~aDiVv~t~~~~~~~g~~---r-~~~~----~~n~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          69 KDADVVIITAGVGRKPGMG---R-LDLL----KRNVPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CCCCEEEECCCCCCCcCCC---H-HHHH----HHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            2689999999876543211   1 1112    2234456666677776667788888764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK07877 hypothetical protein; Provisional

Probab=96.88  E-value=0.0028  Score=64.28  Aligned_cols=109  Identities=19%  Similarity=0.227  Sum_probs=77.2

Q ss_pred             HHHHhhhcccccccccccccCCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecC------------
Q 019551           29 AFGVYGYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRS------------   94 (339)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~------------   94 (339)
                      .+-+.+-..|..-.|.++...+..+. ..++++++|+|.|+  |+|..+|..|+..|.  +++++|.+            
T Consensus        76 ~v~~~~~~~~~~~r~~Rn~~~ig~~~-Q~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~  152 (722)
T PRK07877         76 VVHLLGPREFRAVRLDRNRNKITAEE-QERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPA  152 (722)
T ss_pred             eeecCCHHHhhHHHhhchhhhCCHHH-HHHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccC
Confidence            33444444454445555544444332 34588999999999  499999999999994  89998874            


Q ss_pred             ------chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551           95 ------KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus        95 ------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                            ..|.+.+.+.+.+.++..++..+...++ .+.+.++++       ..|+||.|.
T Consensus       153 ~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        153 GVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             ChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHhc-------CCCEEEECC
Confidence                  3466777788888888888888887777 566666654       578888775

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.87  E-value=0.011  Score=50.56  Aligned_cols=84  Identities=13%  Similarity=0.256  Sum_probs=56.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCccE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---------------------EKGETALSAIRSKTGNENV  114 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---------------------~~~~~~~~~l~~~~~~~~~  114 (339)
                      ..+++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.                     .+.+.+.+.+++..|..++
T Consensus        15 ~~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i   93 (198)
T cd01485          15 NKLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKL   93 (198)
T ss_pred             HHHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEE
Confidence            3477889999988 5699999999999998 588887541                     2444556666777676666


Q ss_pred             EEEeccCCC-HHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          115 HLELCDLSS-ITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       115 ~~~~~Dl~~-~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +.+..++.+ .+...+++.       ..|++|.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-------~~dvVi~~~  121 (198)
T cd01485          94 SIVEEDSLSNDSNIEEYLQ-------KFTLVIATE  121 (198)
T ss_pred             EEEecccccchhhHHHHHh-------CCCEEEECC
Confidence            666655542 223333332       567777553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.85  E-value=0.007  Score=56.38  Aligned_cols=81  Identities=26%  Similarity=0.378  Sum_probs=53.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      -+|+.+||.||++|+|.+.++-....|+..+++.++.++.+ ..++    .+..    ...|..+++-++. +....  .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~----lGAd----~vvdy~~~~~~e~-~kk~~--~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKK----LGAD----EVVDYKDENVVEL-IKKYT--G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHH----cCCc----EeecCCCHHHHHH-HHhhc--C
Confidence            35889999999999999998888888966666666665533 2222    2322    2257777443333 22221  5


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      +++|+++-|.|-.
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            6899999999864

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.83  E-value=0.03  Score=51.44  Aligned_cols=116  Identities=20%  Similarity=0.235  Sum_probs=76.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCc-cEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNE-NVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++.|+|+ |.+|..+|..|+..|.  .+++++.++++++....++....+-. ...+...  .|.+++           
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~-----------   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT-----------   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh-----------
Confidence            47889996 9999999999998875  69999999988887777776543211 1122211  233322           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|.+||...... .+.   ...+..|    .-+.+.+.+.+.+....+.++++|..
T Consensus        70 ~~adivvitaG~~~k~g-~~R---~dll~~N----~~i~~~~~~~i~~~~p~~~vivvsNP  122 (312)
T cd05293          70 ANSKVVIVTAGARQNEG-ESR---LDLVQRN----VDIFKGIIPKLVKYSPNAILLVVSNP  122 (312)
T ss_pred             CCCCEEEECCCCCCCCC-CCH---HHHHHHH----HHHHHHHHHHHHHhCCCcEEEEccCh
Confidence            26899999999865421 222   2334444    34566666777776677888888753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.82  E-value=0.0082  Score=54.90  Aligned_cols=78  Identities=21%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEeccCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLELCDLS  122 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~  122 (339)
                      +|+|.|+ ||+|-++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+..+..++..+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3788887 8999999999999998 68888864                   2355666667776666667777766666


Q ss_pred             CHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          123 SITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       123 ~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +.....++++       ..|++|++.
T Consensus        80 ~~~~~~~f~~-------~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFFK-------QFDLVFNAL   98 (312)
T ss_pred             CccchHHHHh-------cCCEEEECC
Confidence            5322222322       567777654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14968 putative methyltransferase; Provisional

Probab=96.82  E-value=0.03  Score=46.99  Aligned_cols=121  Identities=18%  Similarity=0.171  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCc-cEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++++|-.|++.|.   ++..+++.|.+|+.++++++..+.+.+.+....... .+.++.+|+.+.         +.+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            57789999987775   566666668999999999887777766665432211 277788887442         111  


Q ss_pred             CCccEEEEccccccCCCCCC-hhhhhhhhhhhhhHH---HHHHHHHHHHHHhhCCCCEEEEEc
Q 019551          139 KPVHVLVNNAGVLENNRLIT-SEGFELNFAVNVLGT---YTITESMVPLLEKAAPDARVITVS  197 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~-~~~~~~~~~vN~~~~---~~l~~~~l~~m~~~~~~~~Iv~vs  197 (339)
                      ..+|.++.|........... .+.+...+..+..+.   -.+++.+.+.|+   ++|.++++.
T Consensus        89 ~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk---~gG~~~~~~  148 (188)
T PRK14968         89 DKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLK---PGGRILLLQ  148 (188)
T ss_pred             cCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcC---CCeEEEEEE
Confidence            26899999987654322111 111222222222222   234566666664   456666554

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.81  E-value=0.0021  Score=45.06  Aligned_cols=36  Identities=36%  Similarity=0.461  Sum_probs=23.6

Q ss_pred             CC-CEEEEEcCCCchHHHHHHHHH-HCCCEEEEEecCc
Q 019551           60 EG-KNCVVTGANAGIGYATAEGLA-SRGATVYMVCRSK   95 (339)
Q Consensus        60 ~~-k~vlITGas~gIG~a~a~~l~-~~G~~Vvl~~r~~   95 (339)
                      .| |+|||+|+|+|.|+|-.-.++ ..|++.+-++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            44 899999999999999444444 6788888887643

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.78  E-value=0.011  Score=51.75  Aligned_cols=77  Identities=23%  Similarity=0.347  Sum_probs=51.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      |+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|.+.+.+.+.+..+..++..+..++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            677775 8999999999999998 78888874                   23455555666666666666666666654


Q ss_pred             HHHH-HHHHHHHhcCCCCccEEEEcc
Q 019551          124 ITEI-KSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       124 ~~~v-~~~~~~~~~~~~~id~lInnA  148 (339)
                      .++. ..++       ...|++|++.
T Consensus        81 ~~~~~~~f~-------~~~DvVi~a~   99 (234)
T cd01484          81 EQDFNDTFF-------EQFHIIVNAL   99 (234)
T ss_pred             hhhchHHHH-------hCCCEEEECC
Confidence            3322 1122       2567777653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.76  E-value=0.0043  Score=55.15  Aligned_cols=74  Identities=16%  Similarity=0.246  Sum_probs=54.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++||+|||+- |+.+++.|.+.|++|+...++....+...     ..+   ...+..+..|.+++.+++.+     ..+|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-----~~g---~~~v~~g~l~~~~l~~~l~~-----~~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-----IHQ---ALTVHTGALDPQELREFLKR-----HSID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-----ccC---CceEEECCCCHHHHHHHHHh-----cCCC
Confidence            6899999997 99999999999999999999876433221     111   22334566677777777764     2799


Q ss_pred             EEEEcccc
Q 019551          143 VLVNNAGV  150 (339)
Q Consensus       143 ~lInnAG~  150 (339)
                      +||+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998764

This enzyme was found to be a monomer by gel filtration.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.74  E-value=0.027  Score=53.93  Aligned_cols=114  Identities=18%  Similarity=0.081  Sum_probs=77.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-------CC--EEEEEecCchhHHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASR-------GA--TVYMVCRSKEKGETALSAIRSKT-GN-ENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-------G~--~Vvl~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      +|.|+|++|.+|.++|..|+..       |.  +++++++++++++....++.... +- .++.+. .  .+.+++    
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye~~----  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYEVF----  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHHHh----
Confidence            6899999999999999999988       65  79999999999998888887543 11 122111 1  233332    


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHh-hCCCCEEEEEcC
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEK-AAPDARVITVSS  198 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~~~~Iv~vsS  198 (339)
                             ..-|++|..||...... .+   -.+.++.|.    -+.+...+.+.+ ..+.+.||.+|-
T Consensus       175 -------kdaDiVVitAG~prkpG-~t---R~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        175 -------QDAEWALLIGAKPRGPG-ME---RADLLDING----QIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             -------CcCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                   36899999999864321 22   233455554    355666666766 456788888774

>PRK07411 hypothetical protein; Validated

Probab=96.73  E-value=0.011  Score=55.98  Aligned_cols=83  Identities=25%  Similarity=0.247  Sum_probs=61.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .+++..+|+|.|+ ||+|..+++.|+..|. +++++|.+                   ..|.+.+.+.+.+.++..++..
T Consensus        34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            3578899999998 7999999999999998 78888764                   3466777788888888777777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...++.. ...+++.       ..|++|.+.
T Consensus       113 ~~~~~~~~-~~~~~~~-------~~D~Vvd~~  136 (390)
T PRK07411        113 YETRLSSE-NALDILA-------PYDVVVDGT  136 (390)
T ss_pred             EecccCHH-hHHHHHh-------CCCEEEECC
Confidence            77666543 3333333       466666664

>PRK14851 hypothetical protein; Provisional

Probab=96.73  E-value=0.011  Score=59.66  Aligned_cols=97  Identities=14%  Similarity=0.191  Sum_probs=68.5

Q ss_pred             cccccccCCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHH
Q 019551           42 GFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETA  101 (339)
Q Consensus        42 ~~~~~~~~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~  101 (339)
                      .|.++..-|.++ ...++++++|+|.|+ ||+|..+++.|+..|. +++++|.+                   ..|.+.+
T Consensus        25 ry~R~~~l~g~e-~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~  102 (679)
T PRK14851         25 AFSRNIGLFTPG-EQERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVM  102 (679)
T ss_pred             HhhhhHHhcCHH-HHHHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHH
Confidence            344444434432 234588999999996 8999999999999998 68888753                   3466667


Q ss_pred             HHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          102 LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       102 ~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      .+.+.+.++..++..+...++ .+.+.++++       ..|+||.+.
T Consensus       103 ~~~l~~inP~~~I~~~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        103 KEQALSINPFLEITPFPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             HHHHHHhCCCCeEEEEecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            777888888778888877775 445555554       467777554

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.73  E-value=0.0056  Score=59.00  Aligned_cols=80  Identities=16%  Similarity=0.275  Sum_probs=55.6

Q ss_pred             ccCCCEEEEEcC----------------CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC
Q 019551           58 RIEGKNCVVTGA----------------NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL  121 (339)
Q Consensus        58 ~l~~k~vlITGa----------------s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  121 (339)
                      +|+||+||||+|                ||-.|.++|+++..+|++|++++-...        +  .. ...+.++  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~--~~-p~~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------L--AD-PQGVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------C--CC-CCCceEE--Ee
Confidence            489999999987                457999999999999999999874322        0  01 1234444  34


Q ss_pred             CCHHHHHHHHHHHhcCCCCccEEEEccccccCC
Q 019551          122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENN  154 (339)
Q Consensus       122 ~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~  154 (339)
                      .+.+++.+.+++.   +. .|++|++|++....
T Consensus       320 ~ta~eM~~av~~~---~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        320 ESARQMLAAVEAA---LP-ADIAIFAAAVADWR  348 (475)
T ss_pred             cCHHHHHHHHHhh---CC-CCEEEEecccccee
Confidence            4556655555443   33 69999999986543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.71  E-value=0.0084  Score=55.10  Aligned_cols=78  Identities=17%  Similarity=0.263  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+++|+||++++|.++++.....|++|+.+++++++.+.+.+     .+...  +  .|..+.+ +.+.+.+...  +
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-----~Ga~~--v--i~~~~~~-~~~~v~~~~~--~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-----LGFDA--V--FNYKTVS-LEEALKEAAP--D  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----cCCCE--E--EeCCCcc-HHHHHHHHCC--C
Confidence            47899999999999999988888899999999998876554422     22111  1  2333322 2222222221  4


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            6999998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.70  E-value=0.013  Score=55.57  Aligned_cols=65  Identities=29%  Similarity=0.331  Sum_probs=50.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++.+.+|+|.|+ ||+|..+|+.|+..|. ++.++|.+                   ..|.+.+.+.+.+.++..++..
T Consensus        38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~  116 (392)
T PRK07878         38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRL  116 (392)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEE
Confidence            3477889999998 8999999999999998 68888764                   2356666777777777666666


Q ss_pred             EeccCC
Q 019551          117 ELCDLS  122 (339)
Q Consensus       117 ~~~Dl~  122 (339)
                      +..+++
T Consensus       117 ~~~~i~  122 (392)
T PRK07878        117 HEFRLD  122 (392)
T ss_pred             EeccCC
Confidence            665554

>PLN02602 lactate dehydrogenase

Probab=96.68  E-value=0.037  Score=51.57  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=76.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++.|+|+ |.+|.++|..|+..|.  .+++++.++++++....++....+- ....+..  -.+.+++           
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~--~~dy~~~-----------  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA--STDYAVT-----------  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe--CCCHHHh-----------
Confidence            68999996 9999999999998875  6999999998888777777654321 1122221  1222222           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..||...... .+.   .+.+..|    .-+.+.+.+.+.+....+.++++|-
T Consensus       104 ~daDiVVitAG~~~k~g-~tR---~dll~~N----~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQIPG-ESR---LNLLQRN----VALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCCcC-CCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            26899999999865322 222   2233334    3456666677776666788888874

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.66  E-value=0.039  Score=50.44  Aligned_cols=113  Identities=21%  Similarity=0.235  Sum_probs=73.7

Q ss_pred             EEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           65 VVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        65 lITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      .|.|+ |++|.++|..|+..|  .+++++++++++++....++...... ....+..+  .+.+++           ..-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~l-----------~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYADA-----------ADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHHh-----------CCC
Confidence            57787 679999999999998  57999999999888887777654321 11122211  222222           268


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      |++|.+||...... .+.   ...+..|    .-+.+.+.+.+.+..+.+.++++|..
T Consensus        68 DiVIitag~p~~~~-~~R---~~l~~~n----~~i~~~~~~~i~~~~p~~~viv~sNP  117 (300)
T cd00300          68 DIVVITAGAPRKPG-ETR---LDLINRN----APILRSVITNLKKYGPDAIILVVSNP  117 (300)
T ss_pred             CEEEEcCCCCCCCC-CCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEccCh
Confidence            99999999864322 121   2223333    44566677777776677888888753

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.62  E-value=0.047  Score=50.38  Aligned_cols=123  Identities=16%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++.+++.|.|| |.+|..+|..++..|. +|++++++++.++....++....  .+....+...  +|.+++        
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~~l--------   72 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYEDI--------   72 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHHHh--------
Confidence            34568999995 8899999999999995 89999999886543222222211  1112222211  232221        


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                         ..-|++|+++|.......  .+++ -.+.+..|+    .+.+.+.+.+.+..+.+.++++|-..
T Consensus        73 ---~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 ---AGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             ---CCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence               268999999998653221  1111 133344453    46777777777776667777777533

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.61  E-value=0.031  Score=51.52  Aligned_cols=114  Identities=18%  Similarity=0.106  Sum_probs=72.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSK--EKGETALSAIRSKT-GN-ENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~--~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      ++.|+|++|++|.++|..|...|.       .++++|.++  ++++....++.... +. ..+.+.   -.+.+++    
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~~~~~----   77 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT---TDPEEAF----   77 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe---cChHHHh----
Confidence            588999999999999999998874       799999965  44666665655432 11 011111   1122222    


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcC
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSS  198 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS  198 (339)
                             ..-|++|..||......    +.-.+.++.|.    -+.+.+.+.+.+..+ .+.++.+|-
T Consensus        78 -------~daDvVVitAG~~~k~g----~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        78 -------KDVDAALLVGAFPRKPG----MERADLLSKNG----KIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             -------CCCCEEEEeCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence                   26799999999864321    22333455554    455666667766655 777777763

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14852 hypothetical protein; Provisional

Probab=96.61  E-value=0.009  Score=61.97  Aligned_cols=83  Identities=17%  Similarity=0.173  Sum_probs=62.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++.+.+|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..|.+.+.+.+.+.+|..++..
T Consensus       328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~  406 (989)
T PRK14852        328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS  406 (989)
T ss_pred             HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3578899999996 8999999999999998 68887763                   3467777788888888778887


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +...++ .+.+.++++       ..|++|.+.
T Consensus       407 ~~~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        407 FPEGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             EecCCC-HHHHHHHhh-------CCCEEEECC
Confidence            776663 455555554       567777644

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.61  E-value=0.009  Score=57.36  Aligned_cols=74  Identities=22%  Similarity=0.415  Sum_probs=53.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+...+++    +.        +..+.++..+.+      
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~----g~--------~~~~~~~~~~~l------  240 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF----GG--------EAIPLDELPEAL------  240 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CC--------cEeeHHHHHHHh------
Confidence            67899999987 9999999999999998 7999999988776555443    21        111223333322      


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                       ...|++|++.|...
T Consensus       241 -~~aDvVI~aT~s~~  254 (423)
T PRK00045        241 -AEADIVISSTGAPH  254 (423)
T ss_pred             -ccCCEEEECCCCCC
Confidence             25799999986443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.59  E-value=0.019  Score=55.87  Aligned_cols=84  Identities=24%  Similarity=0.231  Sum_probs=56.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC-------------CHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS-------------SIT  125 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-------------~~~  125 (339)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++.++++...+ +    +   ..++..|..             +.+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l----G---a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M----G---AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----C---CeEEeccccccccccccceeecCHH
Confidence            44679999997 999999999999999999999999886553332 2    2   233333431             123


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~  151 (339)
                      ..+...+.+.+.....|++|+++-+.
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccC
Confidence            33333333444456799999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.59  E-value=0.0015  Score=56.14  Aligned_cols=38  Identities=24%  Similarity=0.428  Sum_probs=34.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      +++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            588999999998 78999999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.58  E-value=0.018  Score=52.73  Aligned_cols=117  Identities=20%  Similarity=0.156  Sum_probs=70.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++.|+|++|.+|.++|..|+..|.  .++++|.+  +++....++.....  ...+..+. .+ +++.+.       ...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~-~~-~~~y~~-------~~d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL-GP-EELKKA-------LKG   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec-CC-CchHHh-------cCC
Confidence            578999999999999999998884  79999998  44444444433221  11111110 11 111111       136


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      -|++|.+||......    +.=.+.++.|..    +.+...+.+.+..+.+.++++|-..
T Consensus        69 aDivvitaG~~~k~g----~tR~dll~~N~~----i~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRKPG----MTRDDLFNINAG----IVRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCch
Confidence            899999999864322    222334555554    4455555666655678888887654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.58  E-value=0.039  Score=50.56  Aligned_cols=114  Identities=17%  Similarity=0.163  Sum_probs=76.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC---CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG---NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.|.|+ |.+|..+|..|+..|.  .+++++.++++++....++.....   ..++.+...   +.+++           
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~~-----------   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDDC-----------   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHHh-----------
Confidence            568898 9999999999998875  699999999888877777765322   123444332   33332           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..||...... .+.+ =.+.++.|    ..+.+.+.|.+.+....+.++.+|-
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence            26899999999865322 2210 12234444    3566778888887766777777765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.57  E-value=0.017  Score=53.21  Aligned_cols=73  Identities=26%  Similarity=0.372  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+|++ |+|...++.....|++|+.++|++++++.+.+ +    + ....   .|-+|.+.++.+.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l----G-Ad~~---i~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L----G-ADHV---INSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h----C-CcEE---EEcCCchhhHHhHh-------
Confidence            48999999998 99988777777799999999999988665433 2    2 1222   23335555544433       


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      ..|++|++++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2899999987

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.54  E-value=0.011  Score=56.59  Aligned_cols=74  Identities=18%  Similarity=0.424  Sum_probs=53.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+++    +.   ..+.     .+++.+.+.    
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~----g~---~~i~-----~~~l~~~l~----  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL----GG---EAVK-----FEDLEEYLA----  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CC---eEee-----HHHHHHHHh----
Confidence            367899999998 999999999999999 68999999988766555443    21   1121     233333333    


Q ss_pred             CCCCccEEEEccccc
Q 019551          137 KNKPVHVLVNNAGVL  151 (339)
Q Consensus       137 ~~~~id~lInnAG~~  151 (339)
                         ..|++|.+.|..
T Consensus       240 ---~aDvVi~aT~s~  251 (417)
T TIGR01035       240 ---EADIVISSTGAP  251 (417)
T ss_pred             ---hCCEEEECCCCC
Confidence               579999997643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.53  E-value=0.018  Score=52.81  Aligned_cols=117  Identities=17%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++.|+|++|.+|.++|..|+..|.  .++++|+++  .+....++.....  ...+..+.  +.++..+       ....
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~--~~~i~~~~--~~~~~~~-------~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPT--AASVKGFS--GEEGLEN-------ALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCc--CceEEEec--CCCchHH-------HcCC
Confidence            368999999999999999998875  799999976  2222222322111  11111100  0011111       1237


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      -|++|..||......    ++-.+.+..|+.    +.+...+.+.+..+.+.|+++|-..
T Consensus        68 aDivvitaG~~~~~g----~~R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG----MTRDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCEEEEeCCCCCCCC----ccHHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            899999999864321    222334556655    6667777777766778888887644

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.53  E-value=0.016  Score=54.76  Aligned_cols=86  Identities=21%  Similarity=0.329  Sum_probs=62.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|++||.|| |-+|.-+|++|+++|. +|+++.|+.++.+++.+++.            +++...+++.....    
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l~----  237 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEALA----  237 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhhh----
Confidence            478999999998 7899999999999995 79999999999888877652            23333444444443    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhh
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELN  165 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~  165 (339)
                         ..|++|.+.|...  +.++.+.++..
T Consensus       238 ---~~DvVissTsa~~--~ii~~~~ve~a  261 (414)
T COG0373         238 ---EADVVISSTSAPH--PIITREMVERA  261 (414)
T ss_pred             ---hCCEEEEecCCCc--cccCHHHHHHH
Confidence               6789988776543  33455555444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.53  E-value=0.0065  Score=50.46  Aligned_cols=39  Identities=31%  Similarity=0.371  Sum_probs=34.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ++.||+++|.|++.-+|..+|+.|.++|++|.++.|+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            488999999999666799999999999999999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.50  E-value=0.032  Score=48.53  Aligned_cols=42  Identities=29%  Similarity=0.321  Sum_probs=37.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.++..++
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478999999999999999999999999999999887765544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.49  E-value=0.015  Score=53.49  Aligned_cols=79  Identities=19%  Similarity=0.241  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++++|.|+++++|.++++.+.+.|++|+.++++.++.+.+.+.+    +. . .+  .|..+.+..+. +.+..  .+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~----g~-~-~~--~~~~~~~~~~~-v~~~~--~~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL----GF-D-AA--INYKTPDLAEA-LKEAA--PD  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc----CC-c-eE--EecCChhHHHH-HHHhc--cC
Confidence            4789999999999999999999999999999998877655433222    21 1 11  12233322222 22222  14


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++++++|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            6999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.49  E-value=0.02  Score=52.12  Aligned_cols=79  Identities=22%  Similarity=0.329  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+ .+    .+ .+..   .+..+.+....+.. ... ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~g-~~~~---~~~~~~~~~~~~~~-~~~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA----LG-ADIA---INYREEDFVEVVKA-ETG-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cC-CcEE---EecCchhHHHHHHH-HcC-CC
Confidence            478999999999999999999999999999999987765432 22    12 1111   23333333333222 221 23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|.+|+|+|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.49  E-value=0.021  Score=51.72  Aligned_cols=75  Identities=20%  Similarity=0.328  Sum_probs=54.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      |+|.|+ ||+|-++++.|+..|. ++.++|.+                   ..|.+.+.+.+.+..++.++..+..++.+
T Consensus         2 VlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            678875 8999999999999998 68888753                   24566667777777777777777777764


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      .+  .+++       ...|++|.+.
T Consensus        81 ~~--~~f~-------~~fdvVi~al   96 (291)
T cd01488          81 KD--EEFY-------RQFNIIICGL   96 (291)
T ss_pred             hh--HHHh-------cCCCEEEECC
Confidence            32  2222       3678887654

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.49  E-value=0.0061  Score=59.39  Aligned_cols=46  Identities=28%  Similarity=0.413  Sum_probs=39.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            357899999996 7999999999999999999999998877665544

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.48  E-value=0.0089  Score=59.22  Aligned_cols=62  Identities=21%  Similarity=0.214  Sum_probs=46.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC----------------------chhHHHHHHHHHhhcCCccE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS----------------------KEKGETALSAIRSKTGNENV  114 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~----------------------~~~~~~~~~~l~~~~~~~~~  114 (339)
                      .+++.+|+|.|+ ||+|-.+|+.|+..|. +++++|.+                      ..|.+.+.+.+++.+|+.++
T Consensus       335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i  413 (664)
T TIGR01381       335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQA  413 (664)
T ss_pred             HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEE
Confidence            467889999998 8999999999999998 78888863                      22445556666677666666


Q ss_pred             EEEecc
Q 019551          115 HLELCD  120 (339)
Q Consensus       115 ~~~~~D  120 (339)
                      ..+...
T Consensus       414 ~~~~~~  419 (664)
T TIGR01381       414 TGHRLT  419 (664)
T ss_pred             EEeeee
Confidence            555544

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.45  E-value=0.066  Score=49.07  Aligned_cols=115  Identities=22%  Similarity=0.217  Sum_probs=68.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++.|.|| |-+|..+|..++..|. +|++++++++.++....++.....  .....+..  -+|.+++           
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~d~~~~-----------   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG--TNDYEDI-----------   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe--CCCHHHH-----------
Confidence            46889999 8899999999999875 999999998876554444332211  01111111  1222211           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|.++|...... .+   -.+.+.-|    .-+.+.+.+.+.+..+.+.+|+++-
T Consensus        69 ~~aDiVii~~~~p~~~~-~~---r~~~~~~n----~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-MS---RDDLLGIN----AKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCEEEECCCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            26799999998754322 11   12223333    3455666666666545666777764

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.41  E-value=0.036  Score=50.49  Aligned_cols=116  Identities=22%  Similarity=0.230  Sum_probs=72.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCcc-EEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNEN-VHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++|.|+|+ |+||.++|..|+.++.  .+++++.++++++....++........ -..+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            35889999 9999999999988764  799999997777766666654321110 1112222 223322           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|-.||...... .+.   .+.++.|..    +.+.+.+.+.+....+.++.++-
T Consensus        68 ~~aDiVvitAG~prKpG-mtR---~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          68 KGADIVVITAGVPRKPG-MTR---LDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-CCH---HHHHHhhHH----HHHHHHHHHHhhCCCeEEEEecC
Confidence            26899999999876443 222   233555544    34555555555545677777664

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.39  E-value=0.021  Score=53.04  Aligned_cols=76  Identities=18%  Similarity=0.256  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+. +    .+...  +  .|..+. ++.+    +....
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~----lGa~~--v--i~~~~~-~~~~----~~~~~  233 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-E----MGADK--L--VNPQND-DLDH----YKAEK  233 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-H----cCCcE--E--ecCCcc-cHHH----HhccC
Confidence            4889999986 8999999988888898 6889999987765432 2    22221  1  243332 2222    22223


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.++|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            569999999883

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.012  Score=53.14  Aligned_cols=37  Identities=32%  Similarity=0.370  Sum_probs=33.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      +++||+++|.|+++-.|++++..|.++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4789999999998779999999999999999988874

>PLN00203 glutamyl-tRNA reductase

Probab=96.36  E-value=0.018  Score=56.39  Aligned_cols=77  Identities=18%  Similarity=0.257  Sum_probs=54.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.+...+++    ++..+.+.  +   .++..+.+.     
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~~--~---~~dl~~al~-----  328 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIYK--P---LDEMLACAA-----  328 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEee--c---HhhHHHHHh-----
Confidence            67899999999 9999999999999997 7999999998877665543    22222221  2   223333332     


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                        ..|+||.+.+...
T Consensus       329 --~aDVVIsAT~s~~  341 (519)
T PLN00203        329 --EADVVFTSTSSET  341 (519)
T ss_pred             --cCCEEEEccCCCC
Confidence              6799998876443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.36  E-value=0.014  Score=56.41  Aligned_cols=60  Identities=20%  Similarity=0.271  Sum_probs=45.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +++|.|+ |.+|+++++.|.+.|+.|++++++++..++..+.       ..+.++.+|.++.+.++++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHHc
Confidence            5788888 9999999999999999999999998876654331       1355666777766655443

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.36  E-value=0.0081  Score=54.78  Aligned_cols=39  Identities=31%  Similarity=0.367  Sum_probs=35.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG   98 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~   98 (339)
                      +.+++++|.|. |++|+.+++.|...|++|.+.+|++++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            57899999998 7899999999999999999999997653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.35  E-value=0.015  Score=48.86  Aligned_cols=41  Identities=32%  Similarity=0.341  Sum_probs=35.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      .+.||++.|.|. |.||+++|+.+...|++|+..+|+.....
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            488999999987 99999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.33  E-value=0.022  Score=51.91  Aligned_cols=80  Identities=25%  Similarity=0.341  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+ .++    + .. .++  |.........+. .... ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g-~~-~~~--~~~~~~~~~~~~-~~~~-~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL----G-AA-HVI--VTDEEDLVAEVL-RITG-GK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----C-CC-EEE--ecCCccHHHHHH-HHhC-CC
Confidence            468999999999999999999999999999999987765544 221    2 11 122  222222222222 2221 22


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++++++|.
T Consensus       213 ~~d~vi~~~~~  223 (328)
T cd08268         213 GVDVVFDPVGG  223 (328)
T ss_pred             CceEEEECCch
Confidence            59999999873

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.29  E-value=0.019  Score=52.71  Aligned_cols=74  Identities=24%  Similarity=0.457  Sum_probs=53.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+++++|.|+ |.+|+.+++.|...|. +|++++|++++.++..+++    +.   ..+     +.+++.+.+.     
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~----g~---~~~-----~~~~~~~~l~-----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL----GG---NAV-----PLDELLELLN-----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----CC---eEE-----eHHHHHHHHh-----
Confidence            57899999998 9999999999998774 7999999988776665553    21   111     2233333332     


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                        ..|++|.+.+...
T Consensus       238 --~aDvVi~at~~~~  250 (311)
T cd05213         238 --EADVVISATGAPH  250 (311)
T ss_pred             --cCCEEEECCCCCc
Confidence              4799999987544

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.24  E-value=0.017  Score=50.09  Aligned_cols=83  Identities=18%  Similarity=0.265  Sum_probs=59.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++.+|+|.|. ||+|...++.|++.|. ++.++|.+                   ..+.+-+.+.+....|..++..+
T Consensus        27 kl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~  105 (263)
T COG1179          27 KLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI  105 (263)
T ss_pred             HHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh
Confidence            477889999998 8999999999999998 78888764                   23555556666666665555544


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      . |+-+++.+++++.      ..+|++|-+.
T Consensus       106 ~-~f~t~en~~~~~~------~~~DyvIDai  129 (263)
T COG1179         106 N-DFITEENLEDLLS------KGFDYVIDAI  129 (263)
T ss_pred             H-hhhCHhHHHHHhc------CCCCEEEEch
Confidence            3 5556666666554      3688887553

>PRK04148 hypothetical protein; Provisional

Probab=96.22  E-value=0.014  Score=46.34  Aligned_cols=56  Identities=20%  Similarity=0.174  Sum_probs=44.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      +++.+++.|.+  -|.++|+.|++.|++|+++|.+++..+.+.+.        .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            45789999987  67889999999999999999998865544332        3677888888765

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.22  E-value=0.049  Score=49.30  Aligned_cols=31  Identities=26%  Similarity=0.496  Sum_probs=26.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRS   94 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~   94 (339)
                      +|+|.|+ ||+|..+|+.|+..|. +++++|.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3678877 7999999999999998 68888754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.21  E-value=0.021  Score=44.04  Aligned_cols=71  Identities=21%  Similarity=0.218  Sum_probs=51.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      ++|-|. +.+|+.+++.|.+.+.+|++++++++..++..++        .+.++.+|.++++.++++--      .+.+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a~i------~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERAGI------EKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHTTG------GCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhcCc------cccCE
Confidence            467777 5899999999999777999999998876555432        26688899999998876521      25677


Q ss_pred             EEEccc
Q 019551          144 LVNNAG  149 (339)
Q Consensus       144 lInnAG  149 (339)
                      +|...+
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            765543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.20  E-value=0.026  Score=50.97  Aligned_cols=62  Identities=18%  Similarity=0.302  Sum_probs=47.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++.+.+|+|.|+ +|+|.++|+.|+..|. +|.++|.+                   ..+.+.+.+++.+.++..++..+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            477889999988 7999999999999998 68888754                   23555666677777666666655


Q ss_pred             ecc
Q 019551          118 LCD  120 (339)
Q Consensus       118 ~~D  120 (339)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.17  E-value=0.032  Score=47.91  Aligned_cols=37  Identities=19%  Similarity=0.279  Sum_probs=34.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            589999999999 8999999999999999999998764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.12  E-value=0.025  Score=59.64  Aligned_cols=77  Identities=19%  Similarity=0.239  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCE-------------EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GAT-------------VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~-------------Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      +.|.|+|.|| |.||+..|+.|++. ++.             |++++++.++++++.+.+    +  ++..+.+|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEEeecCCHH
Confidence            4678999997 99999999999875 333             888899987776655542    2  4567889999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEcccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~  150 (339)
                      ++.++++       .+|+||++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            8877665       58999999864

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.11  E-value=0.15  Score=46.81  Aligned_cols=113  Identities=26%  Similarity=0.280  Sum_probs=70.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|.|+ |.+|..+|..|+.+|  ..|+++++++++++.....+....+- .......   .+.++           ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-----------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-----------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-----------hC
Confidence            4788898 899999999999999  58999999988776555445432110 1122121   22222           13


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      .-|++|.++|......    +...+.+..|    ..+.+.+.+.+.+....+.+++++.
T Consensus        67 ~aDiViita~~~~~~~----~~r~dl~~~n----~~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKPG----ETRLDLLKRN----VAIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            6899999999754321    1222333333    3455666666666656788887764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.11  E-value=0.023  Score=46.96  Aligned_cols=86  Identities=19%  Similarity=0.190  Sum_probs=55.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-----ccEEEEeccCCCHHHHHHHHHH--Hh
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-----ENVHLELCDLSSITEIKSFANR--FS  135 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~--~~  135 (339)
                      ++-+.|- |-+|..+|++|+++|++|.+.+|++++.++..++-......     ..+.++..=+.+.+++++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            5667776 89999999999999999999999998887766432111100     1234444556788888888876  55


Q ss_pred             cCCCCccEEEEccc
Q 019551          136 LKNKPVHVLVNNAG  149 (339)
Q Consensus       136 ~~~~~id~lInnAG  149 (339)
                      ....+=.++|++.-
T Consensus        82 ~~l~~g~iiid~sT   95 (163)
T PF03446_consen   82 AGLRPGKIIIDMST   95 (163)
T ss_dssp             GGS-TTEEEEE-SS
T ss_pred             hccccceEEEecCC
Confidence            54444455665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.05  E-value=0.061  Score=51.87  Aligned_cols=40  Identities=25%  Similarity=0.365  Sum_probs=35.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      ++.|.||+|++|.++|+.|.+.|++|++.+|+++...+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5889999999999999999999999999999987654433

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.03  E-value=0.029  Score=49.06  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=32.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRS   94 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~   94 (339)
                      +++++++|.|| ||.|+++|+.|.+.|.   +|.+++|+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            67899999999 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.02  E-value=0.033  Score=51.06  Aligned_cols=42  Identities=26%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .+++++|.|+++++|.++++.....|++|+++++++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999989999999999998765544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.00  E-value=0.059  Score=50.71  Aligned_cols=79  Identities=20%  Similarity=0.205  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++++|+|+ ++||...++.+...|+ +|+.+++++++++.+ +++    +. ..   ..|..+ .+++.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~----Ga-~~---~i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL----GA-TD---CVNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CC-Ce---EEcccccchhHHHHHHHHhC-
Confidence            4789999986 8999999888888899 799999988876644 222    21 11   123332 2233333333332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.00  E-value=0.12  Score=47.30  Aligned_cols=113  Identities=19%  Similarity=0.215  Sum_probs=66.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +.|.|+ |.+|..+|..++..|. +|++++++++.++....++.....  .....+..  -+|.+++           ..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~--t~d~~~l-----------~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG--TNDYEDI-----------AG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE--cCCHHHh-----------CC
Confidence            358898 8899999999998876 999999998765433333332210  01111111  0122221           26


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      -|++|.++|...... .+   -.+.+.-|    +-+.+.+.+.+.+..+.+.++++|-
T Consensus        67 ADiVIit~g~p~~~~-~~---r~e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          67 SDVVVITAGIPRKPG-MS---RDDLLGTN----AKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             CCEEEEecCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            799999999754322 11   11222333    4566777777776656677777764

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.99  E-value=0.02  Score=45.18  Aligned_cols=89  Identities=25%  Similarity=0.300  Sum_probs=54.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhc---C---CccEEEEeccCCCHHHHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKT---G---NENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~---~---~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      -++-|.|+ |-+|.++++.|.+.|++|..+ +|+.+..+++.+.+....   .   ..+..++.+-+.| +.+..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHH
Confidence            36788888 899999999999999998766 577666665554432110   0   0123333344455 3788999998


Q ss_pred             hcC--CCCccEEEEcccccc
Q 019551          135 SLK--NKPVHVLVNNAGVLE  152 (339)
Q Consensus       135 ~~~--~~~id~lInnAG~~~  152 (339)
                      ...  ..+=.++||+.|-..
T Consensus        89 a~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HCC--S-TT-EEEES-SS--
T ss_pred             HHhccCCCCcEEEECCCCCh
Confidence            876  334468999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.98  E-value=0.14  Score=48.40  Aligned_cols=114  Identities=18%  Similarity=0.084  Sum_probs=73.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-E----EEE----EecCchhHHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-T----VYM----VCRSKEKGETALSAIRSKT-GN-ENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~----Vvl----~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      +|.|+||+|.+|.++|..|+..|. .    |++    ++++.++++....++.... +- ..+.+..   .+.+++    
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~y~~~----  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DPYEVF----  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CCHHHh----
Confidence            799999999999999999998875 3    444    4899999888887776543 21 1221111   222322    


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                             ..-|++|..||......    ++-.+.++.|.    -+.+...+.+.+.. +.+.|+.+|-
T Consensus       119 -------kdaDIVVitAG~prkpg----~tR~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       119 -------EDADWALLIGAKPRGPG----MERADLLDING----QIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             -------CCCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                   36899999999864321    22233455554    35566666666633 5677777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK05442 malate dehydrogenase; Provisional

Probab=95.95  E-value=0.08  Score=48.90  Aligned_cols=115  Identities=17%  Similarity=0.094  Sum_probs=70.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKE--KGETALSAIRSKT-GN-ENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +++.|+|++|.+|..+|..|+..|.       .++++|.+++  +++....++.... +. ..+.+. .  .+.++    
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~y~~----   77 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D--DPNVA----   77 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c--ChHHH----
Confidence            4789999999999999999998764       6999998543  3444444444322 10 011111 1  11122    


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                             ...-|++|..||......    +.-.+.+..|.    -+.+.+.+.+.+.. +.+.++.+|-
T Consensus        78 -------~~daDiVVitaG~~~k~g----~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         78 -------FKDADVALLVGARPRGPG----MERKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -------hCCCCEEEEeCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                   136899999999764322    22333455554    45677777777643 4677777774

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.95  E-value=0.043  Score=50.17  Aligned_cols=79  Identities=22%  Similarity=0.228  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+ +++    + .. .+  .|..+.+..+.+.+ .. ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~----g-~~-~~--~~~~~~~~~~~~~~-~~-~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL----G-AD-VA--VDYTRPDWPDQVRE-AL-GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----C-CC-EE--EecCCccHHHHHHH-Hc-CCC
Confidence            378999999999999999999999999999999988765443 222    2 11 11  23333333333222 11 223


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|.++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.94  E-value=0.039  Score=43.38  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=53.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-CCCEEE-EEecCc----------------------hhHHHHHHHHHhhcCCccEEEEe
Q 019551           63 NCVVTGANAGIGYATAEGLAS-RGATVY-MVCRSK----------------------EKGETALSAIRSKTGNENVHLEL  118 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~-~G~~Vv-l~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~  118 (339)
                      ++.|.|++|-+|+.+++.+.+ .|.+++ .++|++                      +.+++..++         .. +.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---------~D-Vv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---------AD-VV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----------S-EE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---------CC-EE
Confidence            588999999999999999999 688865 556665                      222222211         11 44


Q ss_pred             ccCCCHHHHHHHHHHHhcCCCCccEEEEccccc
Q 019551          119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~  151 (339)
                      .|++.++.+.+.++...+.  ++.+++-..|..
T Consensus        72 IDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             EEES-HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             EEcCChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence            6999999999888888776  677888888763

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.86  E-value=0.048  Score=50.48  Aligned_cols=78  Identities=21%  Similarity=0.251  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|+|+ +++|..+++.+...|++ |+++++++++.+.+ +++    + .. .  ..|..+.+ .+++.+ +. ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~----g-a~-~--~i~~~~~~-~~~~~~-~~-~~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL----G-AD-F--VINSGQDD-VQEIRE-LT-SG  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----C-CC-E--EEcCCcch-HHHHHH-Hh-CC
Confidence            4889999986 89999999988889998 99999988765543 232    2 11 1  12433333 333222 21 12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            369999998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.85  E-value=0.058  Score=51.55  Aligned_cols=90  Identities=10%  Similarity=0.108  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .|.+++|.||+|++|...++.+...|+   +|+++++++++++.+.+......-...+.....|..+.+++.+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            478999999999999998876666554   79999999888765543211000000111112243332233333333322


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                       ...+|.+|.++|.
T Consensus       255 -g~g~D~vid~~g~  267 (410)
T cd08238         255 -GQGFDDVFVFVPV  267 (410)
T ss_pred             -CCCCCEEEEcCCC
Confidence             2358999988763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.85  E-value=0.28  Score=45.51  Aligned_cols=65  Identities=18%  Similarity=0.181  Sum_probs=46.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH---HHHHhhcCCccEEEEeccCCC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL---SAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      .+.|+++.|.|. |.||+++|+.|...|++|+..+|+++......   ..+.+.....++.++.+-.+.
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            488999999987 78999999999999999999999875432211   122333334456666665553

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.83  E-value=0.053  Score=49.33  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999887664433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.81  E-value=0.06  Score=49.64  Aligned_cols=67  Identities=19%  Similarity=0.196  Sum_probs=46.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHH-----HHHHHhhcCCccEEEEeccCCCHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETA-----LSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~-----~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      .+.|||+-|.|. |.||+++|+.+...|++|+..++ ........     ...+.+.....++..+.+-++++.
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT  211 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPET  211 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcch
Confidence            478999999997 89999999999999999999999 33221110     111222222345666667666543

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.80  E-value=0.052  Score=49.86  Aligned_cols=78  Identities=23%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|.|+++++|.++++.....|++|+.+.+++++.+.+ +++    + .. .++  |..+. +..+.+.....  .
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g-~~-~v~--~~~~~-~~~~~~~~~~~--~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL----G-CD-RPI--NYKTE-DLGEVLKKEYP--K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc----C-Cc-eEE--eCCCc-cHHHHHHHhcC--C
Confidence            478999999999999999998888999999999887765433 222    2 11 112  22222 22223333222  4


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|.++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02928 oxidoreductase family protein

Probab=95.79  E-value=0.045  Score=51.09  Aligned_cols=38  Identities=26%  Similarity=0.327  Sum_probs=34.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            588999999998 89999999999999999999998743

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.75  E-value=0.041  Score=50.36  Aligned_cols=79  Identities=16%  Similarity=0.167  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+++|.|+++++|.++++.....|++|+++.++.++.+...+     .+ .. .++  +..+.+ ..+.+.+... ..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-----~g-~~-~~~--~~~~~~-~~~~i~~~~~-~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-----LG-IG-PVV--STEQPG-WQDKVREAAG-GA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-----cC-CC-EEE--cCCCch-HHHHHHHHhC-CC
Confidence            47899999999999999999888999999999888776444422     12 11 112  222222 2222222221 23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus       208 ~~d~v~d~~g  217 (324)
T cd08292         208 PISVALDSVG  217 (324)
T ss_pred             CCcEEEECCC
Confidence            5999999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.75  E-value=0.092  Score=48.92  Aligned_cols=41  Identities=29%  Similarity=0.343  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++++|.|+ +++|..+++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999998888999999999998876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.74  E-value=1.4  Score=39.44  Aligned_cols=250  Identities=16%  Similarity=0.075  Sum_probs=130.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HCCCEEEEEec--Cch-----h----HHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLA-SRGATVYMVCR--SKE-----K----GETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~-~~G~~Vvl~~r--~~~-----~----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      .|+|||.|+|+|-|.+.--..+ ..|++-+.+..  ...     .    -.....+..++. +--..-+..|.-+.+.-+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHHHHH
Confidence            4899999999999987433332 14666554432  111     0    111222322222 223455678888888888


Q ss_pred             HHHHHHhcCCCCccEEEEccccccC-C--------------------C--C-------------CChhhhhhhhhhhhhH
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLEN-N--------------------R--L-------------ITSEGFELNFAVNVLG  172 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~-~--------------------~--~-------------~~~~~~~~~~~vN~~~  172 (339)
                      .+++.+++.+|.+|.+|..-+-... .                    .  .             .+.++++....  ++|
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VMG  197 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VMG  197 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hhC
Confidence            8899999999999999987432110 0                    0  0             12233333222  122


Q ss_pred             H--H-HHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEE
Q 019551          173 T--Y-TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFY  249 (339)
Q Consensus       173 ~--~-~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~  249 (339)
                      -  + ..+.+++..=.-. .+.+-+-.|-.+....          .+.....+-+.+|.-++.-++.+...++..|=+.+
T Consensus       198 GeDWq~WidaLl~advla-eg~kTiAfsYiG~~iT----------~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~  266 (398)
T COG3007         198 GEDWQMWIDALLEADVLA-EGAKTIAFSYIGEKIT----------HPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGAR  266 (398)
T ss_pred             cchHHHHHHHHHhccccc-cCceEEEEEecCCccc----------cceeeccccchhhhcHHHHHHHHHHHHHhcCCCee
Confidence            1  1 1233332211111 3455555554443321          23444567889999999999999988887765554


Q ss_pred             EeeCCcccCCCc--cCcchhHHHH---HhccCCCHHHHHHHHHHHhccCCCC-----C-CCcceeeCCCCCCcccccccc
Q 019551          250 SMHPGWAETPGV--AKSMPSFNER---FAGNLRTSEEGADTVLWLALQPKEK-----L-VSGSFYFDRAEAPKHLKFAAT  318 (339)
Q Consensus       250 ~v~PG~v~T~~~--~~~~~~~~~~---~~~~~~~~~e~A~~v~~l~s~~~~~-----~-~~G~~~~d~~~~~~~~~~~~~  318 (339)
                      ..-.-.+-|...  ...+|.....   .++.-++-|-+-+.+-.|.++.-..     . ..|.+..|..|.++       
T Consensus       267 vsVlKavVTqASsaIP~~plYla~lfkvMKekg~HEgcIeQi~rlfse~ly~g~~~~~D~e~rlR~Dd~El~~-------  339 (398)
T COG3007         267 VSVLKAVVTQASSAIPMMPLYLAILFKVMKEKGTHEGCIEQIDRLFSEKLYSGSKIQLDDEGRLRMDDWELRP-------  339 (398)
T ss_pred             eeehHHHHhhhhhccccccHHHHHHHHHHHHcCcchhHHHHHHHHHHHHhhCCCCCCcCcccccccchhhcCH-------
Confidence            443333434221  1122322222   2333456777777777777643221     0 11233333333322       


Q ss_pred             cCCHHHHHHHHHHH
Q 019551          319 AASHARIDPIVDVL  332 (339)
Q Consensus       319 ~~~~~~~~~l~~~~  332 (339)
                       .-+.+.+++|..+
T Consensus       340 -dvQ~~v~~lw~qv  352 (398)
T COG3007         340 -DVQDQVRELWDQV  352 (398)
T ss_pred             -HHHHHHHHHHHhc
Confidence             4566778888754

>PLN02740 Alcohol dehydrogenase-like

Probab=95.73  E-value=0.064  Score=50.70  Aligned_cols=79  Identities=23%  Similarity=0.241  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|++++|.|+ ++||..+++.+...|+ +|+++++++++++.+. +    .+. .. +  .|..+. +++.+.+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~----~Ga-~~-~--i~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-E----MGI-TD-F--INPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-H----cCC-cE-E--EecccccchHHHHHHHHhC-
Confidence            4889999986 9999999998888999 6999999887766442 2    221 11 2  233332 123333333332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999984

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.73  E-value=0.071  Score=50.91  Aligned_cols=40  Identities=30%  Similarity=0.306  Sum_probs=36.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      +.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            68999999997 79999999999999999999999887644

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.73  E-value=0.03  Score=47.14  Aligned_cols=44  Identities=32%  Similarity=0.286  Sum_probs=37.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS  107 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~  107 (339)
                      +|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999999988887777665

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.72  E-value=0.0058  Score=46.39  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=32.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +++||.+||.|| |.+|..=++.|.+.|++|.+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            588999999999 8999999999999999999999886

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.70  E-value=0.052  Score=49.24  Aligned_cols=42  Identities=33%  Similarity=0.422  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++++|+|+++++|.++++.+...|++|+.++++.++.+..
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999987664433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.69  E-value=0.031  Score=45.85  Aligned_cols=41  Identities=27%  Similarity=0.322  Sum_probs=32.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET  100 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~  100 (339)
                      +.||+++|.|= |.+|+.+|+.|...|++|+++..++-++-+
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            78999999987 899999999999999999999999865443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.68  E-value=0.08  Score=49.75  Aligned_cols=79  Identities=19%  Similarity=0.205  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|.+++|.|+ +++|...++.+...|+ +|+.+++++++++.+ +++    +. .. +  .|..+. +++.+.+.++.. 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l----Ga-~~-~--i~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF----GA-TD-C--VNPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CC-CE-E--EcccccchHHHHHHHHHhC-
Confidence            4789999985 8999999998888999 699999998876644 222    22 11 1  233332 234444444432 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.+.|.
T Consensus       255 -~g~d~vid~~g~  266 (368)
T cd08300         255 -GGVDYTFECIGN  266 (368)
T ss_pred             -CCCcEEEECCCC
Confidence             369999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.67  E-value=0.081  Score=51.69  Aligned_cols=78  Identities=19%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++|.|+ |++|.++|+.|.++|++|+++++++.. .....+.+.+.    .+.+...+-..             .
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~-------------~   75 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT-------------L   75 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc-------------c
Confidence            56889999997 889999999999999999999866532 22333444332    23343322111             0


Q ss_pred             CCCccEEEEccccccCC
Q 019551          138 NKPVHVLVNNAGVLENN  154 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~  154 (339)
                      ....|.+|...|+....
T Consensus        76 ~~~~D~Vv~s~Gi~~~~   92 (480)
T PRK01438         76 PEDTDLVVTSPGWRPDA   92 (480)
T ss_pred             cCCCCEEEECCCcCCCC
Confidence            12578888888876543

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.66  E-value=0.035  Score=52.54  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=30.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS   94 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~   94 (339)
                      +++.++||.|| ||||-++-+.|+..|. +|.+++.+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlD   45 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLD   45 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEecc
Confidence            56778999998 8999999999999998 58888764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.65  E-value=0.048  Score=48.92  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+|++|++|+|..|.-..+--.-+|++||.++-.+++..-+.+++-    -+.+    .|...+ ++.+...+.  .-.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG----fD~~----idyk~~-d~~~~L~~a--~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG----FDAG----IDYKAE-DFAQALKEA--CPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC----Ccee----eecCcc-cHHHHHHHH--CCC
Confidence            59999999999999976555444579999999999988776665542    1111    344444 333333322  224


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT  203 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~  203 (339)
                      .||+.+-|.|--                        ...+++++|..   .+||+..+-++.|.
T Consensus       219 GIDvyfeNVGg~------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN  255 (340)
T COG2130         219 GIDVYFENVGGE------------------------VLDAVLPLLNL---FARIPVCGAISQYN  255 (340)
T ss_pred             CeEEEEEcCCch------------------------HHHHHHHhhcc---ccceeeeeehhhcC
Confidence            799999999843                        22455566653   48898888777764

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.60  E-value=0.04  Score=44.26  Aligned_cols=41  Identities=29%  Similarity=0.345  Sum_probs=36.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG   98 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~   98 (339)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.++...+
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l   65 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL   65 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH
Confidence            37899999999999999999999999999999998654433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.59  E-value=0.057  Score=52.26  Aligned_cols=76  Identities=18%  Similarity=0.210  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ..++++|.|+ |.+|+.+++.|.+.|++|++++++++..++..++    .  ..+.++.+|.++.+.++++-      ..
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~--~~~~~i~gd~~~~~~L~~~~------~~  296 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----L--PNTLVLHGDGTDQELLEEEG------ID  296 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----C--CCCeEEECCCCCHHHHHhcC------Cc
Confidence            4578999999 9999999999999999999999998876554433    1  24567888999988765431      13


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      ..|.+|...
T Consensus       297 ~a~~vi~~~  305 (453)
T PRK09496        297 EADAFIALT  305 (453)
T ss_pred             cCCEEEECC
Confidence            567776444

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.58  E-value=0.076  Score=49.31  Aligned_cols=39  Identities=23%  Similarity=0.327  Sum_probs=35.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      .+.||++.|.|- |.||+++|+.|...|++|+..+|+.+.
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            589999999998 999999999999999999999997653

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.58  E-value=0.19  Score=45.89  Aligned_cols=111  Identities=21%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             EEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           66 VTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        66 ITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |.|+ |.+|..+|..|+..|.  +++++++++++++....++.....  ..++.+..   .+.+++           ..-
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GDYSDC-----------KDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CCHHHH-----------CCC
Confidence            3455 8999999999998875  699999999888887777765431  11233221   233322           268


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      |++|..||...... .+.   ...+..|.    -+.+.+.+.+.+..+.+.++++|-.
T Consensus        66 DivVitag~~rk~g-~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP  115 (299)
T TIGR01771        66 DLVVITAGAPQKPG-ETR---LELVGRNV----RIMKSIVPEVVKSGFDGIFLVATNP  115 (299)
T ss_pred             CEEEECCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            99999999864322 222   23344454    4556666666666577888888753

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.56  E-value=0.12  Score=46.74  Aligned_cols=42  Identities=33%  Similarity=0.401  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999889999999999887765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.54  E-value=0.061  Score=39.21  Aligned_cols=34  Identities=38%  Similarity=0.544  Sum_probs=30.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEec
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCR   93 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r   93 (339)
                      +.+|+++|.|+ |+.|+.+++.|.+. +.+|.+.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            67899999999 99999999999998 567888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.54  E-value=0.1  Score=47.78  Aligned_cols=42  Identities=24%  Similarity=0.393  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|.+++|.|+++++|.++++.+...|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988888887765544

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.51  E-value=0.099  Score=49.98  Aligned_cols=79  Identities=19%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC------EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEe
Q 019551           64 CVVTGANAGIGYATAEGLASRGA------TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLEL  118 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~------~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  118 (339)
                      |+|.|+ ||||-++++.|+..|.      ++.++|.+                   ..+.+.+.+.+.+..+..++..+.
T Consensus         2 VlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~   80 (435)
T cd01490           2 VFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ   80 (435)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            677785 8999999999999998      78888863                   235556666777777777777777


Q ss_pred             ccCCCHHHHHHHHHHHhcCCCCccEEEEc
Q 019551          119 CDLSSITEIKSFANRFSLKNKPVHVLVNN  147 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~~~~id~lInn  147 (339)
                      ..+.....  ..++  .+.+...|++|++
T Consensus        81 ~~v~~~~~--~~~~--~~f~~~~DvVi~a  105 (435)
T cd01490          81 NRVGPETE--HIFN--DEFWEKLDGVANA  105 (435)
T ss_pred             cccChhhh--hhhh--HHHhcCCCEEEEC
Confidence            66643211  1111  0112357777776

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.51  E-value=0.067  Score=50.34  Aligned_cols=78  Identities=21%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|+|+ +++|..+++.+...|+ +|+++++++++++.+ ++    .+. . .+  .|..+.+..++ +.++.  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga-~-~~--i~~~~~~~~~~-i~~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE----LGA-T-AT--VNAGDPNAVEQ-VRELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH----cCC-c-eE--eCCCchhHHHH-HHHHh--C
Confidence            4789999985 8999998888888899 699999988776543 22    221 1 11  23333322222 22222  2


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.++|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            368999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.49  E-value=0.059  Score=49.22  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.+.+ +++    + ...   ..|..+....++ +.+.. ...
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g-~~~---~~~~~~~~~~~~-~~~~~-~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL----G-ADE---VIDSSPEDLAQR-VKEAT-GGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc----C-CCE---EecccchhHHHH-HHHHh-cCC
Confidence            478999999999999999999999999999999988765433 222    2 111   122233222222 22221 223


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|.++++.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6899999886

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.49  E-value=0.096  Score=49.13  Aligned_cols=74  Identities=18%  Similarity=0.286  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|.|+ ++||..+++.+...|++|++++.+.++..+..+++    +. . .+  .|..+.+.+.+    .   .+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~----Ga-~-~v--i~~~~~~~~~~----~---~~  246 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL----GA-D-SF--LVSTDPEKMKA----A---IG  246 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC----CC-c-EE--EcCCCHHHHHh----h---cC
Confidence            4789999775 89999999988889999998887766544333332    21 1 11  13333322222    1   13


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|.+.|
T Consensus       247 ~~D~vid~~g  256 (360)
T PLN02586        247 TMDYIIDTVS  256 (360)
T ss_pred             CCCEEEECCC
Confidence            5899999887

>PLN02494 adenosylhomocysteinase

Probab=95.42  E-value=0.092  Score=50.53  Aligned_cols=40  Identities=25%  Similarity=0.304  Sum_probs=35.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      +.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            67999999998 59999999999999999999999876543

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.39  E-value=0.23  Score=42.94  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH-----------hhcCCccEEEEeccCCCHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR-----------SKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~-----------~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      .+.+||+-|++.|   .=|..|+++|++|+.++.++..++.+.++-.           +.+...++.++.+|+.+...  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            4679999999777   4577889999999999999988776433211           01123467888888877542  


Q ss_pred             HHHHHHhcCCCCccEEEEccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~  151 (339)
                             ...+..|.++-++...
T Consensus       109 -------~~~~~fD~i~D~~~~~  124 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALI  124 (213)
T ss_pred             -------ccCCCcCEEEechhhc
Confidence                   1123567777665443

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein

Probab=95.38  E-value=0.15  Score=44.99  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC-----------CEEEEEecC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG-----------ATVYMVCRS   94 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G-----------~~Vvl~~r~   94 (339)
                      +..+|+|.|+ ||+|.++++.|++.|           .+++++|.+
T Consensus        10 ~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D   54 (244)
T TIGR03736        10 RPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDD   54 (244)
T ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCC
Confidence            4678999998 899999999999874           288998875

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.37  E-value=0.11  Score=48.74  Aligned_cols=78  Identities=22%  Similarity=0.265  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|.+|+|.|+ +++|..+++.+...|+ +|+++++++++.+.+ ++    .+. . .+  .|..+. +++.+.+.++.. 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~----~Ga-~-~~--i~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK----FGV-T-EF--VNPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCC-c-eE--EcccccchhHHHHHHHHhC-
Confidence            4789999986 8999999888888899 799999998765543 22    221 1 11  133321 234444444332 


Q ss_pred             CCCccEEEEccc
Q 019551          138 NKPVHVLVNNAG  149 (339)
Q Consensus       138 ~~~id~lInnAG  149 (339)
                       +.+|+++.+.|
T Consensus       256 -~~~d~vid~~G  266 (369)
T cd08301         256 -GGVDYSFECTG  266 (369)
T ss_pred             -CCCCEEEECCC
Confidence             26999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.36  E-value=0.15  Score=48.39  Aligned_cols=42  Identities=31%  Similarity=0.425  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|.+++|+|+++++|.+++..+...|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988888999999998887765544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.33  E-value=0.065  Score=47.97  Aligned_cols=105  Identities=16%  Similarity=0.236  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|++++|.||+|..|.-+ =+|++ .|++||..+-+.|+..-+..+    ++-...    .|.-++.++.+++.+.-.  
T Consensus       153 ~geTv~VSaAsGAvGql~-GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~----~G~d~a----fNYK~e~~~~~aL~r~~P--  221 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLV-GQFAKLMGCYVVGSAGSKEKVDLLKTK----FGFDDA----FNYKEESDLSAALKRCFP--  221 (343)
T ss_pred             CCCEEEEeeccchhHHHH-HHHHHhcCCEEEEecCChhhhhhhHhc----cCCccc----eeccCccCHHHHHHHhCC--
Confidence            589999999999999754 45554 699999999998876655443    232211    344444455555444221  


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      ..||+.+-|.|--                        ++.+++..|+.   .|||+..+-.+.+
T Consensus       222 ~GIDiYfeNVGG~------------------------~lDavl~nM~~---~gri~~CG~ISqY  258 (343)
T KOG1196|consen  222 EGIDIYFENVGGK------------------------MLDAVLLNMNL---HGRIAVCGMISQY  258 (343)
T ss_pred             CcceEEEeccCcH------------------------HHHHHHHhhhh---ccceEeeeeehhc
Confidence            3699999999842                        33455556664   4888887765555

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.31  E-value=0.14  Score=47.87  Aligned_cols=39  Identities=28%  Similarity=0.367  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGE   99 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~   99 (339)
                      .|+++||+| ++++|.++++.+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            578999997 59999999998888999 9999998877654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.30  E-value=0.051  Score=48.96  Aligned_cols=38  Identities=29%  Similarity=0.426  Sum_probs=34.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      ++.||+++|.|.|.-+|+.+|..|.++|++|.++.+..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            48899999999999999999999999999999888753

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.29  E-value=0.1  Score=48.15  Aligned_cols=41  Identities=27%  Similarity=0.316  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET  100 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~  100 (339)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  205 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLEL  205 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999999876543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.29  E-value=0.036  Score=51.09  Aligned_cols=37  Identities=24%  Similarity=0.220  Sum_probs=33.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .+.||++.|.|- |.||+++|+.+...|++|+..+|..
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~  181 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPG  181 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            589999999998 9999999999999999999998763

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.28  E-value=0.12  Score=47.68  Aligned_cols=42  Identities=31%  Similarity=0.471  Sum_probs=37.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .+.+++|.|+++.+|.++++.+...|++|+.++++.++.+..
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999999999999999988776544

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.26  E-value=0.087  Score=50.79  Aligned_cols=40  Identities=30%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG   98 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~   98 (339)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            3789999999985 699999999999999999999887654

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.24  E-value=0.098  Score=48.07  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++++++||++++|.++++.....|++|+.+++++++.+.+.+     .+. . .++  |..+.+..+. +.+... ...
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-----~g~-~-~~i--~~~~~~~~~~-v~~~~~-~~~  212 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-----IGA-E-YVL--NSSDPDFLED-LKELIA-KLN  212 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----cCC-c-EEE--ECCCccHHHH-HHHHhC-CCC
Confidence            3455556999999999988777789999999998876554432     222 1 122  2222222222 222221 135


Q ss_pred             ccEEEEccc
Q 019551          141 VHVLVNNAG  149 (339)
Q Consensus       141 id~lInnAG  149 (339)
                      +|+++++.|
T Consensus       213 ~d~vid~~g  221 (324)
T cd08291         213 ATIFFDAVG  221 (324)
T ss_pred             CcEEEECCC
Confidence            899999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.24  E-value=0.097  Score=48.87  Aligned_cols=34  Identities=35%  Similarity=0.465  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      .|++++|+|+ |++|...++.+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999986 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.22  E-value=0.32  Score=44.86  Aligned_cols=39  Identities=31%  Similarity=0.339  Sum_probs=35.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .++.||++-|.|- |.||+++|+.+..-|++|+..+|++.
T Consensus       142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            4689999999986 89999999999988999999999864

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.22  E-value=0.043  Score=49.33  Aligned_cols=43  Identities=21%  Similarity=0.315  Sum_probs=37.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSA  104 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~  104 (339)
                      +|+++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+++.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468999997 9999999999999998 599999999887766554

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.16  E-value=0.13  Score=47.46  Aligned_cols=37  Identities=24%  Similarity=0.311  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .|++++|.|+++++|.++++.+...|++|+++.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            4789999999999999999999999999998888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.14  E-value=0.14  Score=48.18  Aligned_cols=79  Identities=22%  Similarity=0.310  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|.+++|.| ++++|.++++.+...|+ +|+.++++.++.+.+ +++    + .. .+  .+..+. ++..+.+.++.. 
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l----G-a~-~~--i~~~~~~~~~~~~v~~~~~-  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL----G-AT-EC--INPQDYKKPIQEVLTEMTD-  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----C-Cc-eE--ecccccchhHHHHHHHHhC-
Confidence            478999996 58999999999999999 799999988775544 222    2 11 11  122221 123333333322 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|.++++.|.
T Consensus       259 -~~~d~vld~~g~  270 (373)
T cd08299         259 -GGVDFSFEVIGR  270 (373)
T ss_pred             -CCCeEEEECCCC
Confidence             469999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.12  E-value=0.13  Score=47.94  Aligned_cols=79  Identities=25%  Similarity=0.393  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|+|+ +++|..+++.+...|+ +|+++++++++.+.+ .++    +. ..   ..|..+.+-.+.+ .+.. ..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~----ga-~~---~i~~~~~~~~~~l-~~~~-~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL----GA-TI---VLDPTEVDVVAEV-RKLT-GG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CC-CE---EECCCccCHHHHH-HHHh-CC
Confidence            4789999985 8999999999999999 798998888765533 222    21 11   1243433322222 2221 11


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            349999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.08  E-value=0.13  Score=47.16  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=34.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+.||++.|.|- |.||+++|+.|...|++|+..+|+.+
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            478999999986 89999999999999999999998754

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.08  E-value=0.15  Score=49.40  Aligned_cols=79  Identities=18%  Similarity=0.219  Sum_probs=51.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+|+++|+|++ |+|.++|+.|+++|++|++.+.++...  ..+++.+..  ..+.+...... ..    ..       
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~--~gi~~~~g~~~-~~----~~-------   65 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF--DGLVFYTGRLK-DA----LD-------   65 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc--CCcEEEeCCCC-HH----HH-------
Confidence            568999999985 999999999999999999999765431  122333211  12333332211 11    11       


Q ss_pred             CCccEEEEccccccCC
Q 019551          139 KPVHVLVNNAGVLENN  154 (339)
Q Consensus       139 ~~id~lInnAG~~~~~  154 (339)
                      ...|.||...|+....
T Consensus        66 ~~~d~vv~spgi~~~~   81 (445)
T PRK04308         66 NGFDILALSPGISERQ   81 (445)
T ss_pred             hCCCEEEECCCCCCCC
Confidence            2578888888887543

>PLN02827 Alcohol dehydrogenase-like

Probab=95.08  E-value=0.16  Score=47.91  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|++++|.|+ |++|..+++.+...|++ |+++++++++.+.+ ++    .+. . .+  .|..+. ++..+.+.++.. 
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~----lGa-~-~~--i~~~~~~~~~~~~v~~~~~-  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KT----FGV-T-DF--INPNDLSEPIQQVIKRMTG-  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH----cCC-c-EE--EcccccchHHHHHHHHHhC-
Confidence            4889999986 99999999888888985 77788887765433 22    221 1 11  233322 234443443332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       262 -~g~d~vid~~G~  273 (378)
T PLN02827        262 -GGADYSFECVGD  273 (378)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999884

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.07  E-value=0.16  Score=45.70  Aligned_cols=39  Identities=31%  Similarity=0.463  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGE   99 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~   99 (339)
                      .|++++|.|+ ++||..+++.+...|++ |+++++++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            5789999987 89999999888888996 888888877654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.06  E-value=0.5  Score=43.26  Aligned_cols=116  Identities=15%  Similarity=0.132  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCc--cEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNE--NVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+.|.|+ |-+|..+|..++..|. +|++++.+++..+.....+.+.....  ...+..  -+|.+++           
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~--t~d~~~~-----------   67 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG--TNNYADT-----------   67 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe--cCCHHHh-----------
Confidence            35788897 8899999999999886 89999997765442322232221100  011110  0122221           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|-++|...... .+   -.+.+..|..-.    +.+.+.+.+..+.+.||++|..
T Consensus        68 ~~aDiVIitag~p~~~~-~s---R~~l~~~N~~iv----~~i~~~I~~~~p~~~iIv~tNP  120 (305)
T TIGR01763        68 ANSDIVVITAGLPRKPG-MS---REDLLSMNAGIV----REVTGRIMEHSPNPIIVVVSNP  120 (305)
T ss_pred             CCCCEEEEcCCCCCCcC-CC---HHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecCc
Confidence            26799999999764321 11   122445555444    4444444444356778887763

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.05  E-value=0.095  Score=49.00  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|.|+ +++|...++.+...|++ |+.+++++++.+.+. +    .+. . .+  .|..+.+..+. +.+... .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~----~Ga-~-~~--i~~~~~~~~~~-i~~~~~-~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-E----FGA-T-HT--VNSSGTDPVEA-IRALTG-G  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----cCC-c-eE--EcCCCcCHHHH-HHHHhC-C
Confidence            4789999985 99999998888888995 999999887655442 2    222 1 11  23333322222 222211 1


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            258999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.01  E-value=0.15  Score=47.88  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  137 (339)
                      .|.+++|.|+ +++|..+++.....|+ +|+.+++++++.+.+ +++    +. . .+  .|..+. ..+.+.+.+... 
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~----ga-~-~~--i~~~~~~~~~~~~~~~~~~-  252 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF----GA-T-DF--INPKDSDKPVSEVIREMTG-  252 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CC-C-cE--eccccccchHHHHHHHHhC-
Confidence            4789999975 9999999998888899 799999987765544 222    21 1 11  122221 122223333322 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.+.|.
T Consensus       253 -~g~d~vid~~g~  264 (365)
T cd08277         253 -GGVDYSFECTGN  264 (365)
T ss_pred             -CCCCEEEECCCC
Confidence             468999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		1e-19
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-11
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-11
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-11
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-11
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		5e-11
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-10
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-10
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		4e-10
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		1e-09
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-09
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-09
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-09
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-09
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-09
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-09
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		4e-09
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		4e-09
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-09
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		7e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		8e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		8e-09
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		8e-09
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-08
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-08
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		8e-08
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		9e-08
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		9e-08
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		9e-08
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		9e-08
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-08
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		9e-08
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-07
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-07
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-07
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-07
3rj5_A	254	Structure Of Alcohol Dehydrogenase From Drosophila		3e-07
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-07
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		4e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-07
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		4e-07
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		4e-07
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-07
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		4e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-07
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		5e-07
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		5e-07
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-07
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-07
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		8e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		8e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		8e-07
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		8e-07
1a4u_A	254	Alcohol Dehydrogenase From Drosophila Lebanonensis		9e-07
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		9e-07
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		9e-07
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-06
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-06
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-06
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		1e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-06
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		2e-06
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		3e-06
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		4e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		5e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		5e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		5e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-06
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		6e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		6e-06
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-06
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		7e-06
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		8e-06
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		9e-06
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		9e-06
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-05
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-05
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-05
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-05
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-05
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		3e-05
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		3e-05
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-05
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-05
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		3e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-05
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		3e-05
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		3e-05
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		3e-05
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		4e-05
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		4e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		5e-05
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-05
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-05
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-05
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		6e-05
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		6e-05
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		7e-05
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-05
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		9e-05
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		9e-05
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		1e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-04
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-04
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-04
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-04
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-04
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-04
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		4e-04
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		4e-04
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		4e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		4e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-04
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-04
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		5e-04
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-04
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		6e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		7e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH-LELCD 120
           +  V+TGAN+G+G  TA  LA RGATV M  R   KGE   +A R+  G   V  L+L D
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGE---AAARTMAGQVEVRELDLQD 73
Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           LSS+        RF+       VL+NNAG++     +T +GFE     N LG + +T  +
Sbjct: 74  LSSV-------RRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLL 126
Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
           +P L       RV+TVSS   +   +  +DL + S  +     Y+++K   +  T +   
Sbjct: 127 LPRLTD-----RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQR 181
Query: 240 MYKEKGIGFYSM--HPGWAET 258
                G    ++  HPG++ T
Sbjct: 182 RLTAAGSPLRALAAHPGYSHT 202

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EG   +VTG + GIGY   E LAS GA+VY   R++++    L+  RSK     V   +
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASV 64
Query: 119 CDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVL--ENNRLITSEGFELNFAVNVLG 172
           CDLSS +E    + + AN F  K   +++LVNNAG++  +  +  T E + L  ++N   
Sbjct: 65  CDLSSRSERQELMNTVANHFHGK---LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121
Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            Y ++    P L KA+    V+ +SS
Sbjct: 122 AYHLSVLAHPFL-KASERGNVVFISS 146

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EG   +VTG + GIGY   E LAS GA+VY   R++++    L+  RSK     V   +
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASV 63
Query: 119 CDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVL--ENNRLITSEGFELNFAVNVLG 172
           CDLSS +E    + + AN F  K   +++LVNNAG++  +  +  T E + L  ++N   
Sbjct: 64  CDLSSRSERQELMNTVANHFHGK---LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 120
Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            Y ++    P L KA+    V+ +SS
Sbjct: 121 AYHLSVLAHPFL-KASERGNVVFISS 145

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+ +++GK  +VTG+  GIG A AE LAS G+TV +   S E+ +     I +K G +  
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE--GFELNFAVNVLG 172
            +E+  LS  +  K+F   ++L +  + +LVNNAG+  +   +      +E    VN+ G
Sbjct: 61  GVEMNLLSEESINKAFEEIYNLVD-GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTG 119
Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           T+ +T++ +  + K     R++ +SS   +T ++            G   Y+  K   + 
Sbjct: 120 TFLVTQNSLRKMIKQRW-GRIVNISSVVGFTGNV------------GQVNYSTTKAGLIG 166
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVL 287
            T+  ++    + +   ++ PG+ ET   A       +++      G   + EE A+ VL
Sbjct: 167 FTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVL 226
Query: 288 WLA 290
           +L 
Sbjct: 227 FLC 229

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTG + G+G+  A+GLA  G +V +  R+ E+   A   +  K G E +    
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR- 77
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVNVLGT 173
           CD+S+  E+K        K   +  +VN AG+   NR   +E F L+       VN+ GT
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI---NRRHPAEEFPLDEFRQVIEVNLFGT 134
Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           Y +      LL + + +  +I + S           L     +   +  YA +K    +L
Sbjct: 135 YYVCREAFSLL-RESDNPSIINIGS-----------LTVEEVTMPNISAYAASKGGVASL 182
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAET 258
           T+  ++ +   GI    + PGW  T
Sbjct: 183 TKALAKEWGRYGIRVNVIAPGWYRT 207

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   +VTG + GIGYA  E LA  GA VY   R++++ +  L   R K    NV   +
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSV 76
Query: 119 CDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVL--ENNRLITSEGFELNFAVNVLG 172
           CDL S TE    +++ A+ F  K   +++LVNNAGV+  +  +  T + + +    N   
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGK---LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            Y +++   PLL KA+ +  VI +SS   ++A               +  Y+ +K     
Sbjct: 134 AYHLSQIAYPLL-KASQNGNVIFLSSIAGFSA------------LPSVSLYSASKGAINQ 180
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM 265
           +T+  +  + +  I   S+ PG   TP V  ++
Sbjct: 181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAI 213

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 40/277 (14%)
Query: 58  RIEGKNCVVTGANAGIGYATA-EGL-ASRG-ATVYMVCRSKEKGETALSAIRSKTGNENV 114
           R+  K  ++TGA+AGIG ATA E L AS G   + +  R  EK E     I  +  N  V
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG-VLENNRL--ITSEGFELNFAVNVL 171
           H+   D++   +IK F      + K + +LVNNAG  L ++R+  I +E  +  F  NV 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL----EFNSGSF-DGMEQYARN 226
               IT++++P+ + A     ++ + S     A+ T  +    +F  G+F D + +   N
Sbjct: 150 ALINITQAVLPIFQ-AKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELIN 208
Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF--NERFAGNLR------T 278
            +++V L                 + PG  ET     S+  +  NE  A N+        
Sbjct: 209 TKIRVIL-----------------IAPGLVETEF---SLVRYRGNEEQAKNVYKDTTPLM 248
Query: 279 SEEGADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKF 315
           +++ AD +++   + +  +++ +  F   +A  H  F
Sbjct: 249 ADDVADLIVYATSRKQNTVIADTLIFPTNQASPHHIF 285

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 36/266 (13%)
Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           F+  D+  R+    C+VTG  +GIG ATAE  A  GA V +     +  E A   + ++ 
Sbjct: 20  FQSXDLNQRV----CIVTGGGSGIGRATAELFAKNGAYVVVA----DVNEDAAVRVANEI 71
Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT--SEGFELNFA 167
           G++   + + D+SS  + +S   + + K   V VLVNNAG      ++T   E ++   +
Sbjct: 72  GSKAFGVRV-DVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXS 130
Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           VNV G +  ++ ++P+  +    + + T S    YTA         + +      Y  +K
Sbjct: 131 VNVKGIFLCSKYVIPVXRRNGGGSIINTTS----YTA---------TSAIADRTAYVASK 177
Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPG----------WAETPGVAKSMPSFNERFAGNLR 277
               +LT   +  + ++GI   ++ PG          +AE    AK    FN R   +  
Sbjct: 178 GAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRX 237
Query: 278 -TSEEGADTVLWLALQPKEKLVSGSF 302
            T+EE A+  L+LA   + +  +GS 
Sbjct: 238 GTAEEIAEAXLFLA-SDRSRFATGSI 262

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 67/315 (21%)
Query: 52  PEDMQARIEGKNC-VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG 110
           PE     +  + C VVTG N GIG+   + L+S G  V + CR   KG  A+  +++ + 
Sbjct: 2   PETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN-SN 60
Query: 111 NENVHLELCDLSS-ITEIKSFANRFSLKNKPVHVLVNNAGV----LENNRL--------- 156
           +ENV     D++  I  + S A+        + +LVNNAGV    ++ +R          
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120
Query: 157 ----------------ITSEGFEL---NFAVNVLGTYTITESMVPLLEKAAPDARVITVS 197
                           + SE +EL      +N  G  ++TE ++PLL+  +   R++ VS
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ-LSDSPRIVNVS 179
Query: 198 SGGMYTAHLTDDLEFNS-GSFDGMEQYARNKRVQVALTEKWSEMYKEKGI---GFYSMHP 253
           S      +++++      G  D + +   +  V + L +     +KE  I   G+ S   
Sbjct: 180 SSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKD-----FKENLIETNGWPSFGA 234
Query: 254 GW--------AETPGVAKSMPSF--NERFAGNLR----------TSEEGADTVLWLALQP 293
            +        A T  +A  +P F  N    G ++          T+EEGA+ V+ +AL P
Sbjct: 235 AYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFP 294
Query: 294 KEKLVSGSFYFDRAE 308
            +      F++D +E
Sbjct: 295 DDG--PSGFFYDCSE 307

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 53/268 (19%)
Query: 65  VVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVH-LELCDLS 122
           +VTGAN GIG A A  L  +    V +  R   +G+ A+  ++++  +   H L++ DL 
Sbjct: 6   LVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDLQ 65
Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVL--ENNRLITSEGFELNFAVNVLGTYTITESM 180
           SI  ++ F  +   +   ++VLVNNA V    ++ +      E+    N   T  +   +
Sbjct: 66  SIRALRDFLRK---EYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNEL 122
Query: 181 VPLLEKAAPDARVITVSSGGMYTA--HLTDDLE--FNSGSF------DGMEQYARNKRVQ 230
           +P+++   P  RV+ +SS     A  + ++DL+  F+S +       D M+++  + + +
Sbjct: 123 LPIMK---PHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNE 179
Query: 231 VALTEKW-----------------------SEMYKEKGIGFYSMHPGWAETPGVAKSMPS 267
           V   E W                        E  K   I   +  PG  +T    K    
Sbjct: 180 VHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKD--- 236
Query: 268 FNERFAGNLRTSEEGADTVLWLALQPKE 295
                  ++RT EEGA+T ++LAL P +
Sbjct: 237 -------SIRTVEEGAETPVYLALLPPD 257

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EGK  +VTGA+ GIG A AE LA+RGA V     S E G  A+S      G + + L + 
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANG-KGLMLNVT 61
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTIT 177
           D +S   I+S   +   +   V +LVNNAG+  +N L+  +  E N     N+   + ++
Sbjct: 62  DPAS---IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           ++++  + K     R+IT+                      G   YA  K   +  ++  
Sbjct: 119 KAVMRAMMK-KRHGRIITIG---------------------GQANYAAAKAGLIGFSKSL 156
Query: 238 SEMYKEKGIGFYSMHPGWAET-----PGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
           +     +GI    + PG+ ET      G+   +P      AG L  ++E A+ V +LA
Sbjct: 157 AREVASRGITVNVVAPGFIETSDDQRAGILAQVP------AGRLGGAQEIANAVAFLA 208

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D    ++GK  VVTGA  GIG   AE  A  GATV  V    +     L  +  K G 
Sbjct: 204 PADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATV--VAIDVDGAAEDLKRVADKVGG 261
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVN 169
             + L++    ++ +I +           V +LVNNAG+  +  L  +  + ++   AVN
Sbjct: 262 TALTLDVTADDAVDKITAHVTEH--HGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVN 319
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS      +             G   YA  K  
Sbjct: 320 LLAPQRLTEGLVG-NGTIGEGGRVIGLSSMAGIAGN------------RGQTNYATTKAG 366
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + L E  + +  +KGI   ++ PG+ ET
Sbjct: 367 MIGLAEALAPVLADKGITINAVAPGFIET 395

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M A +E K  ++TGA  GIG  T+  LA  GA V +     +  ET L+   +  G 
Sbjct: 2   PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVL----ADLPETDLAGAAASVGR 57
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKN-KPVHVLVNNAGVLENNRLI----TSEGFELNF 166
             VH  + DL++   +++  + F++     + ++ NNA   +   ++    T + ++  F
Sbjct: 58  GAVH-HVVDLTNEVSVRALID-FTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTF 115
Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
            VN  GT  + +  +P L  A   A ++ +SS    TAH          ++D    YA  
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGGA-IVNISSA---TAH---------AAYDMSTAYACT 162
Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNERFAGNLRTSE 280
           K     LT   +  Y   G+   ++ PG   TP +   +P            AG +    
Sbjct: 163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPH 222
Query: 281 EGADTVLWLA 290
           E A+ V +LA
Sbjct: 223 EIAELVCFLA 232

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
           Q  ++GK  +VTGA+ GIG+A A   A  GAT+     ++E  +  ++A   K    N H
Sbjct: 29  QFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAA--YKAAGINAH 86
Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGT 173
             +CD++    I++   +   +   + +LVNNAG++    +I  T+  F     +++   
Sbjct: 87  GYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAP 146
Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + ++++++P + K     ++I + S       +  +L   +     +  YA  K     L
Sbjct: 147 FIVSKAVIPSMIKKG-HGKIINICS-------MMSELGRET-----VSAYAAAKGGLKML 193
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVA 262
           T+  +  Y E  I    + PG+  TP  A
Sbjct: 194 TKNIASEYGEANIQCNGIGPGYIATPQTA 222

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 41/246 (16%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EGK  +VTGA+ GIG A AE LA+RGA V     S E G  A+S      G + + L + 
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANG-KGLMLNVT 61
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTIT 177
           D +S   I+S   +   +   V +LVNNAG+  +N L+  +  E N     N+   + ++
Sbjct: 62  DPAS---IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 178 ESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++++  + K     R+IT+ S  G M                 G   YA  K   +  ++
Sbjct: 119 KAVMRAMMK-KRHGRIITIGSVVGTMGNG--------------GQANYAAAKAGLIGFSK 163
Query: 236 KWSEMYKEKGIGFYSMHPGWAET-----------PGVAKSMPSFNERFAGNLRTSEEGAD 284
             +     +GI    + PG+ ET            G+   +P      AG L  ++E A+
Sbjct: 164 SLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVP------AGRLGGAQEIAN 217
Query: 285 TVLWLA 290
            V +LA
Sbjct: 218 AVAFLA 223

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 41  NGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET 100
           +G    ++N   +    R+  K  V+TGA +GIG A A+   + GA V++  R K+  + 
Sbjct: 9   SGVDLGTENLYFQSXTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA 68
Query: 101 ALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--IT 158
           A++ I    G   V ++  D +++ E+     +   +   + VL  NAG      L  +T
Sbjct: 69  AIAEI----GGGAVGIQ-ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVT 123
Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD 218
            E ++  F  NV G     +  +PLL + +  + V+T S+ G   +  T      + S  
Sbjct: 124 EEQYDDTFDRNVKGVLFTVQKALPLLARGS--SVVLTGSTAG---STGTPAFSVYAASKA 178
Query: 219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV 261
            +  +ARN          W    K++GI   ++ PG  ET G+
Sbjct: 179 ALRSFARN----------WILDLKDRGIRINTLSPGPTETTGL 211

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EG+  +VTGAN G+G A A GLA+ GA V  VC ++   +  L  I    GN +  L  
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEV--VCAARRAPDETLDIIAKDGGNASALL-- 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNF----AVNVLGTY 174
                I      A + S  +    +LVNNAG++   R  + E  EL++     VN+   +
Sbjct: 63  -----IDFADPLAAKDSFTDAGFDILVNNAGIIR--RADSVEFSELDWDEVMDVNLKALF 115
Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
             T++    L       +V+ ++S           L F  G    +  Y   K     LT
Sbjct: 116 FTTQAFAKELLAKGRSGKVVNIAS----------LLSFQGGIR--VPSYTAAKHGVAGLT 163
Query: 235 EKWSEMYKEKGIGFYSMHPGWAET 258
           +  +  +  KGI   ++ PG+ ET
Sbjct: 164 KLLANEWAAKGINVNAIAPGYIET 187

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHL 116
           R++ +  +VTG ++GIG A A   A  GA V +    ++E+    + A+  + G + V L
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLGT 173
              DLS  +  +S  ++       + +L   AG    +   + +TSE F+  FAVNV   
Sbjct: 106 P-GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL 164
Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           + IT+  +PLL K    A +IT SS   Y  + HL D              YA  K   +
Sbjct: 165 FWITQEAIPLLPKG---ASIITTSSIQAYQPSPHLLD--------------YAATKAAIL 207
Query: 232 ALTEKWSEMYKEKGIGFYSMHPG 254
             +   ++   EKGI    + PG
Sbjct: 208 NYSRGLAKQVAEKGIRVNIVAPG 230

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLE 117
           ++GK  VVTG+ +GIG A A  LA  GA V +    + E  E   S + SK G +  +L 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVNVLG 172
             DLS     + F  + +     + +LVNNAG+     +   E F ++      A+N+  
Sbjct: 62  -ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPI---EEFPVDKWNAIIALNLSA 117
Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +  T + +P+++K     R+I ++S     A +                Y   K   V 
Sbjct: 118 VFHGTAAALPIMQKQGW-GRIINIASAHGLVASVNKS------------AYVAAKHGVVG 164
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
           LT+  +     KGI   ++ PGW  TP V K + + +++
Sbjct: 165 LTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQ 203

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 41/246 (16%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EGK  +VTGA+ GIG A AE LA+RGA V     S E G  A+S      G + + L + 
Sbjct: 4   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANG-KGLMLNVT 61
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTIT 177
           D +S   I+S   +   +   V +LVNNAG+  +N L+  +  E N     N+   + ++
Sbjct: 62  DPAS---IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 178 ESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++++  + K     R+IT+ S  G M                 G   +A  K   +  ++
Sbjct: 119 KAVMRAMMK-KRHGRIITIGSVVGTMGNG--------------GQANFAAAKAGLIGFSK 163
Query: 236 KWSEMYKEKGIGFYSMHPGWAET-----------PGVAKSMPSFNERFAGNLRTSEEGAD 284
             +     +GI    + PG+ ET            G+   +P      AG L  ++E A+
Sbjct: 164 SLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVP------AGRLGGAQEIAN 217
Query: 285 TVLWLA 290
            V +LA
Sbjct: 218 AVAFLA 223

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  +V G   G G AT   L   GA V +  R+    E+ ++ IR + G   VH    
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFG-PRVHALRS 61
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGTYTIT 177
           D++ + EI             + +L  NAGV  LE    ++   ++  FAVN  G +   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 178 ESMVPLLEKAAPDARVITVSSGG--MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + + PL+ +            GG  ++T+ + D+     G   G   Y+ +K   V+   
Sbjct: 122 QRLTPLIRE------------GGSIVFTSSVADE-----GGHPGXSVYSASKAALVSFAS 164
Query: 236 KWSEMYKEKGIGFYSMHPGWAETP--GVAKSMPSFNERF---AGNLR------TSEEGAD 284
             +     +GI   S+ PG+ +TP  GVA    +    F     N+       T++E A 
Sbjct: 165 VLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVAR 224
Query: 285 TVLWLALQ 292
            VL+LA +
Sbjct: 225 AVLFLAFE 232

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  +V G   G G AT   L   GA V +  R+    E+ ++ IR + G   VH    
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFG-PRVHALRS 60
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGTYTIT 177
           D++ + EI             + +L  NAGV  LE    ++   ++  FAVN  G +   
Sbjct: 61  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 120
Query: 178 ESMVPLLEKAAPDARVITVSSGG--MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + + PL+ +            GG  ++T+ + D+     G   G   Y+ +K   V+   
Sbjct: 121 QRLTPLIRE------------GGSIVFTSSVADE-----GGHPGXSVYSASKAALVSFAS 163
Query: 236 KWSEMYKEKGIGFYSMHPGWAETP--GVAKSMPSFNERF---AGNLR------TSEEGAD 284
             +     +GI   S+ PG+ +TP  GVA    +    F     N+       T++E A 
Sbjct: 164 VLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVAR 223
Query: 285 TVLWLALQ 292
            VL+LA +
Sbjct: 224 AVLFLAFE 231

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 56/281 (19%)
Query: 65  VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVH-LELCDLS 122
           +VTGAN GIG+A    L  + A  V +  R   +G+ A+  ++++  +   H L++ DL 
Sbjct: 8   LVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDLQ 67
Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITES 179
           SI  +  F  +   +   + VLVNNA +   L+N      +  EL    N +GT  +   
Sbjct: 68  SIRALCDFLRK---EYGGLDVLVNNAAIAFQLDNPTPFHIQA-ELTMKTNFMGTRNVCTE 123
Query: 180 MVPLLEKAAPDARVITVSS--GGMYTAHLTDDLE--FNSGSFDG------MEQYARNKRV 229
           ++PL++   P  RV+ VSS  G       + +L+  F S +         M ++  + + 
Sbjct: 124 LLPLIK---PQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKN 180
Query: 230 QVALTEKWSE---------------MYKEK--------GIGFYSMHPGWAETPGVAKSMP 266
            V   E WS+               +Y  K         I   +  PGW  T       P
Sbjct: 181 GVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAP 240
Query: 267 SFNERFAGNLRTSEEGADTVLWLALQPKE-KLVSGSFYFDR 306
                     ++ E GA+T ++LAL P + +   G F  D+
Sbjct: 241 ----------KSPEVGAETPVYLALLPSDAEGPHGQFVTDK 271

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
            KP D+   +     VVTG ++GIG AT E L   GA V    R  E+   A SA+R + 
Sbjct: 1   MKPYDLSEAV----AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF 56
Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFEL 164
               +   +CD+    ++++FA           +LVNNAG     R+      T E +  
Sbjct: 57  PGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAG---QGRVSTFAETTDEAWSE 113
Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
              +          + +P LE  A DA ++ V+S
Sbjct: 114 ELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNS 146

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  VVTGA+ GIG A A  L S GA V +  R  EK       I +  G    H   
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH--A 84
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-LENNRLITSEGFELN--FAVNVLGTYT 175
           CDLS    I +FA      +    VLVNNAGV      L T +  E +   AVN+   Y 
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 176 ITESMVPLLEKAAPDARVITVSS---------GGMYTA 204
           +  +  P +  AA    +I +SS         G  YTA
Sbjct: 145 LLRAFAPAM-IAAKRGHIINISSLAGKNPVADGAAYTA 181

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 87
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 145
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 146 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 188
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PGW ETP
Sbjct: 189 KALGLELARTGITVNAVCPGWVETP 213

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G + + L +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGMALNV 67
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNAG+  +N L+  +  E +     N+   + 
Sbjct: 68  TNPESIEAVLKAITDEFG----GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           ++++++  + K     R+I V S  G M  A              G   YA  K   +  
Sbjct: 124 LSKAVLRGMMK-KRQGRIINVGSVVGTMGNA--------------GQANYAAAKAGVIGF 168
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFAGNLRTSEEGADTVL 287
           T+  +     +G+   ++ PG+ ET  + K++       +  +  AG L    E A  V 
Sbjct: 169 TKSMAREVASRGVTVNTVAPGFIETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVA 227
Query: 288 WLALQPKEKLVSG 300
           +LA  P+   ++G
Sbjct: 228 FLA-SPEAAYITG 239

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 26/230 (11%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +G+  VVTG  +GIG ATA   A RGA + +    +   E A++ +R +    + H  +C
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+  + E+   A+        V V+ +NAG++    L  +  + +     +++ G+    
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147
Query: 178 ESMVP-LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           E+ +P LLE+        T S  G+           N+    G+  Y   K   V L E 
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVP---------NA----GLGTYGVAKYGVVGLAET 194
Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAG---NLRTSEEGA 283
            +   K  GIG   + P   ET  V+ S     ER  G    +  + EGA
Sbjct: 195 LAREVKPNGIGVSVLCPMVVETKLVSNS-----ERIRGADYGMSATPEGA 239

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D +  ++GK  +VTGA  GIG   AE  A  GA  ++V    E     L+   SK G 
Sbjct: 204 PADWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASKVGG 261
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVN 169
             + L++    ++ +I               +LVNNAG+  +  L   +   ++   AVN
Sbjct: 262 TALWLDVTADDAVDKISEHLRDH--HGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 319
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS     A +  +         G   YA  K  
Sbjct: 320 LLAPLRLTEGLVG-NGSIGEGGRVIGLSS----IAGIAGN--------RGQTNYATTKAG 366
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + +T+  +     KGI   ++ PG+ ET
Sbjct: 367 MIGITQALAPGLAAKGITINAVAPGFIET 395

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  VVTGA +GIG A A G A  GA V    R+    E A          E V  +L
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADL 88
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVNVLGT 173
            DL     +   A   +   + V VLVNNAG++       +E   L        VN+   
Sbjct: 89  ADLEGAANV---AEELA-ATRRVDVLVNNAGIIAR---APAEEVSLGRWREVLTVNLDAA 141
Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + ++ S    +  A    R++T++S           L F  G    +  YA +K   V L
Sbjct: 142 WVLSRSFGTAM-LAHGSGRIVTIAS----------MLSFQGGR--NVAAYAASKHAVVGL 188
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
           T   +  +  +G+G  ++ PG+  T   A ++ + +ER A
Sbjct: 189 TRALASEWAGRGVGVNALAPGYVVTANTA-ALRADDERAA 227

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D +  ++GK  +VTGA  GIG   AE  A  GA  ++V    E     L+   SK G 
Sbjct: 212 PADWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASKVGG 269
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVN 169
             + L++    ++ +I               +LVNNAG+  +  L   +   ++   AVN
Sbjct: 270 TALWLDVTADDAVDKISEHLRDH--HGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 327
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS     A +  +         G   YA  K  
Sbjct: 328 LLAPLRLTEGLVG-NGSIGEGGRVIGLSS----IAGIAGN--------RGQTNYATTKAG 374
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + +T+  +     KGI   ++ PG+ ET
Sbjct: 375 MIGITQALAPGLAAKGITINAVAPGFIET 403

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D +  ++GK  +VTGA  GIG   AE  A  GA  ++V    E     L+   SK G 
Sbjct: 196 PADWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASKVGG 253
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVN 169
             + L++    ++ +I               +LVNNAG+  +  L   +   ++   AVN
Sbjct: 254 TALWLDVTADDAVDKISEHLRDH--HGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 311
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS     A +  +         G   YA  K  
Sbjct: 312 LLAPLRLTEGLVG-NGSIGEGGRVIGLSS----IAGIAGN--------RGQTNYATTKAG 358
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + +T+  +     KGI   ++ PG+ ET
Sbjct: 359 MIGITQALAPGLAAKGITINAVAPGFIET 387

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D +  ++GK  +VTGA  GIG   AE  A  GA  ++V    E     L+   SK G 
Sbjct: 225 PADWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASKVGG 282
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVN 169
             + L++    ++ +I               +LVNNAG+  +  L   +   ++   AVN
Sbjct: 283 TALWLDVTADDAVDKISEHLRDH--HGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 340
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS     A +  +         G   YA  K  
Sbjct: 341 LLAPLRLTEGLVG-NGSIGEGGRVIGLSS----IAGIAGN--------RGQTNYATTKAG 387
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + +T+  +     KGI   ++ PG+ ET
Sbjct: 388 MIGITQALAPGLAAKGITINAVAPGFIET 416

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D +  ++GK  +VTGA  GIG   AE  A  GA  ++V    E     L+   SK G 
Sbjct: 188 PADWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASKVGG 245
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVN 169
             + L++    ++ +I               +LVNNAG+  +  L   +   ++   AVN
Sbjct: 246 TALWLDVTADDAVDKISEHLRDH--HGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 303
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           +L    +TE +V          RVI +SS     A +  +         G   YA  K  
Sbjct: 304 LLAPLRLTEGLVG-NGSIGEGGRVIGLSS----IAGIAGN--------RGQTNYATTKAG 350
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAET 258
            + +T+  +     KGI   ++ PG+ ET
Sbjct: 351 MIGITQALAPGLAAKGITINAVAPGFIET 379

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 87
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG L      T+E   EL   V   N+ G + +T+ +
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRLGGG--ATAELADELWLDVVETNLTGVFRVTKQV 145
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 146 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 188
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 189 KALGLELARTGITVNAVCPGFVETP 213

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 83
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG L      T+E   EL   V   N+ G + +T+ +
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRLGGG--ATAELADELWLDVVETNLTGVFRVTKQV 141
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 142 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 184
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 185 KALGLELARTGITVNAVCPGFVETP 209

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 27/241 (11%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++GKN ++TG ++GIG A +   A  GA + +    +E           K G + V L 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLGTY 174
             DLS     K        +   +++LVNN       +    IT+E  E  F +N+   +
Sbjct: 104 -GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF 162
Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            +T++ +  L++      +I  +S   Y  + T            +  Y+  K   VA T
Sbjct: 163 HVTKAALSHLKQG---DVIINTASIVAYEGNET------------LIDYSATKGAIVAFT 207
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
              S+   +KGI    + PG   TP +     SF+E+     + S+ G++  +    QP 
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEK-----KVSQFGSNVPMQRPGQPY 259
Query: 295 E 295
           E
Sbjct: 260 E 260

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   I GK  V+TG+++GIG A AEG A  GA + +V R  ++   A  +++ K G   +
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVL 60
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLG 172
            + + D+++   + +             +LVNNAG   N  ++ +  E ++  + ++V+ 
Sbjct: 61  EVAV-DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMA 119
Query: 173 TYTITESMVP 182
              +   +VP
Sbjct: 120 AVRLARGLVP 129

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 34/253 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G + + L +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGMALNV 67
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNAG+  +N L+  +  E +     N+   + 
Sbjct: 68  TNPESIEAVLKAITDEFG----GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           ++++++  + K     R+I V S  G M  A              G   YA  K   +  
Sbjct: 124 LSKAVLRGMMK-KRQGRIINVGSVVGTMGNA--------------GQANYAAAKAGVIGF 168
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFAGNLRTSEEGADTVL 287
           T+  +     +G+   ++ PG  ET  + K++       +  +  AG L    E A  V 
Sbjct: 169 TKSMAREVASRGVTVNTVAPGAIETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVA 227
Query: 288 WLALQPKEKLVSG 300
           +LA  P+   ++G
Sbjct: 228 FLA-SPEAAYITG 239

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G + + L +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGMALNV 67
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNAG+  +N L+  +  E +     N+   + 
Sbjct: 68  TNPESIEAVLKAITDEFG----GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           ++++++  + K     R+I V S  G M  A              G   +A  K   +  
Sbjct: 124 LSKAVLRGMMK-KRQGRIINVGSVVGTMGNA--------------GQANFAAAKAGVIGF 168
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFAGNLRTSEEGADTVL 287
           T+  +     +G+   ++ PG+ ET  + K++       +  +  AG L    E A  V 
Sbjct: 169 TKSMAREVASRGVTVNTVAPGFIETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVA 227
Query: 288 WLALQPKEKLVSG 300
           +LA  P+   ++G
Sbjct: 228 FLA-SPEAAYITG 239

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYM---------VCRSKEKGETALSA 104
           D + R +G+  VVTGA AG+G   A   A RGA V +            S+   +  +  
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71
Query: 105 IRSKTGNENV--HLELCDLSSITE--IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE 160
           IR K G E V  +  + D + + E  IK+F          V +LVNNAG+L +  L+ + 
Sbjct: 72  IR-KAGGEAVADYNSVIDGAKVIETAIKAFGR--------VDILVNNAGILRDRSLVKTS 122
Query: 161 GFELNFA--VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
             + N    V++ G++  T++  P ++K      ++T S+ G+Y
Sbjct: 123 EQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY 166

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  ++TGA +G G   A+  A  GA V +V R K   E     +  + G+  + +  
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAER----VAGEIGDAALAVA- 61
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYT 175
            D+S   ++ +       K   V +LVNNAG+    +N  L+  E F+    VNV G Y 
Sbjct: 62  ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 176 ITESMVP 182
           +T  ++P
Sbjct: 122 MTSKLIP 128

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 37/207 (17%)
Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTG ++GIG A A  LA+RG  VY   R  +    A+  +R+     +V    CD++S  
Sbjct: 29  VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTD 86
Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAV-------NVLGTYTIT- 177
           E+ +       +  P+ +LVN+AG     R    E  +L+ A+       N+ G + +T 
Sbjct: 87  EVHAAVAAAVERFGPIGILVNSAG-----RNGGGETADLDDALWADVLDTNLTGVFRVTR 141
Query: 178 ESMVPLLEKAAPDARVITVSSGG-----MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           E +     + A   R++ ++S G     MY A                  Y  +K   V 
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGKQGVMYAA-----------------PYTASKHGVVG 184
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETP 259
            T+       + GI   ++ PG+ ETP
Sbjct: 185 FTKSVGFELAKTGITVNAVCPGYVETP 211

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 87
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 145
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 146 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 188
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE 270
           +         GI   ++ PG+ ETP  A     F++
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAASVREHFSD 224

>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila Lebanonesis T114v Mutant Complexed With Nad+ Length = 254

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  KN +   A  GIG  T+  L  R    +++    E   TAL+ +++     N+    
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHT 61
Query: 119 CDLS-SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
            D++  + E K    +   + K V +L+N AG+L+++++      E   A+N  G   +T
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQI------ERTIAINFTGLVNVT 115
Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
            +++   +K             G   A++     FN  +   +  Y+ +K   V+ T   
Sbjct: 116 TAILDFWDKRK--------GGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSL 165
Query: 238 SEMYKEKGIGFYSMHPGWAETPGV 261
           +++    G+  YS++PG   TP V
Sbjct: 166 AKLAPITGVTAYSINPGITRTPLV 189

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 34/253 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G + + L +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGMALNV 67
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNA +  +N L+  +  E +     N+   + 
Sbjct: 68  TNPESIEAVLKAITDEFG----GVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           ++++++  + K     R+I V S  G M  A              G   YA  K   +  
Sbjct: 124 LSKAVLRGMMK-KRQGRIINVGSVVGTMGNA--------------GQANYAAAKAGVIGF 168
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFAGNLRTSEEGADTVL 287
           T+  +     +G+   ++ PG+ ET  + K++       +  +  AG L    E A  V 
Sbjct: 169 TKSMAREVASRGVTVNTVAPGFIETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVA 227
Query: 288 WLALQPKEKLVSG 300
           +LA  P+   ++G
Sbjct: 228 FLA-SPEAAYITG 239

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 65/274 (23%)
Query: 65  VVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVH-LELCDLS 122
           +VTG N GIG A    L       V +  R   +G+ A+  ++++  +   H L++ DL 
Sbjct: 8   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQ 67
Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGF----ELNFAVNVLGTYTITE 178
           SI  ++ F  +   +   + VLVNNAG+    ++     F    E+    N  GT  +  
Sbjct: 68  SIRALRDFLRK---EYGGLDVLVNNAGI--AFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 179 SMVPLLEKAAPDARVITVSS----GGMYTAHLTDDLEFNSGSFDG------MEQYARNKR 228
            ++PL++   P  RV+ VSS      + +       +F S +         M ++  + +
Sbjct: 123 ELLPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 179
Query: 229 VQVALTEKW-----------------------SEMYKEKGIGFYSMHPGWAET----PGV 261
             V   E W                       SE  K   I   +  PGW  T    P  
Sbjct: 180 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 239
Query: 262 AKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE 295
            KS               EEGA+T ++LAL P +
Sbjct: 240 TKS--------------PEEGAETPVYLALLPPD 259

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   I GK  V+TG+++GIG A AEG A  GA + +V R  ++   A  +++ K G   +
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVL 60
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLG 172
            + + D+++   + +             +LVNNAG   N  ++ +  E ++  + + V+ 
Sbjct: 61  EVAV-DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMA 119
Query: 173 TYTITESMVP 182
              +   +VP
Sbjct: 120 AVRLARGLVP 129

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 103/275 (37%), Gaps = 39/275 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM--VCRSKEKGETALSAIRSKTGNENVHL 116
           ++G+   +TGA  G G + A  LA+ GA +    +C       T   A           +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 117 ELCDLSSITEIKSFANRFSLKN---------KPVHVLVNNAGVLENNRL--ITSEGFELN 165
           E     ++T +    +  +L+            + V+V NAGVL   R+  +T E ++  
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132
Query: 166 FAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
             VN+ GT+    + VP + +A     ++ VSS     A              G   Y+ 
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA------------TPGNGHYSA 180
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------PSFNERF----- 272
           +K    ALT   +    E GI   S+HP   ETP +            PSF   F     
Sbjct: 181 SKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPV 240
Query: 273 -AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR 306
                 T++E AD V WLA      L       D+
Sbjct: 241 QPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDK 275

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 27/241 (11%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++GKN ++TG ++GIG A +   A  GA + +    +E           K G + V L 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG---VLENNRLITSEGFELNFAVNVLGTY 174
             DLS     K        +   +++LVNN       +    IT+E  E  F +N+   +
Sbjct: 104 -GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF 162
Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            +T++ +  L++      +I  +S   Y  + T            +  Y+  K   VA T
Sbjct: 163 HVTKAALSHLKQG---DVIINTASIVAYEGNET------------LIDYSATKGAIVAFT 207
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
              S+   +KGI    + PG   TP +     SF+E+     + S+ G++       QP 
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEK-----KVSQFGSNVPXQRPGQPY 259
Query: 295 E 295
           E
Sbjct: 260 E 260

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++ K  +VTGA +GIG A A+  A   + V  V   +++    +  +R   G E + ++ 
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-MGKEVLGVK- 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYT 175
            D+S   +++ F  R       + VL NNAG+++       ++ E +E   AVN+   + 
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
            + +++P++ K      V T S  G+             G F G   Y   K   + LT 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGI------------RGGFAG-APYTVAKHGLIGLTR 169
Query: 236 KWSEMYKEKGIGFYSMHPGWAET-PGVAKSMPS 267
             +  Y ++GI   ++ PG  +T  G+  S PS
Sbjct: 170 SIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS 202

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 42/247 (17%)
Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GKN  VTGA  GIGYATA      GA V    ++  + +   +             E+ D
Sbjct: 7   GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFAT------------EVMD 54
Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLE--NNRLITSEGFELNFAVNVLGTYTITE 178
           ++   ++     R   + + +  LVN AG+L       ++ E ++  FAVNV G + + +
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114
Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
             +    +    A ++TV+S   +T  +            GM  Y  +K    +L     
Sbjct: 115 QTMNQFRRQRGGA-IVTVASDAAHTPRI------------GMSAYGASKAALKSLALSVG 161
Query: 239 EMYKEKGIGFYSMHPG----------WAETPGVAKSMPSFNERFA-----GNLRTSEEGA 283
                 G+    + PG          W       + +  F E+F      G +   +E A
Sbjct: 162 LELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIA 221
Query: 284 DTVLWLA 290
           +T+L+LA
Sbjct: 222 NTILFLA 228

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 87
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 145
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 146 LKAGGMLERGT--GRIVNIAS---------------TGGKQGLVHAAPYSASKHGVVGFT 188
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 189 KALGLELARTGITVNAVCPGFVETP 213

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 65/274 (23%)
Query: 65  VVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVH-LELCDLS 122
           +VTG N GIG A    L       V +  R   +G+ A+  ++++  +   H L++ DL 
Sbjct: 8   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQ 67
Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGF----ELNFAVNVLGTYTITE 178
           SI  ++ F  +   +   + VLVNNAG+    ++     F    E+    N  GT  +  
Sbjct: 68  SIRALRDFLRK---EYGGLDVLVNNAGI--AFKVADPTPFHIQAEVTMKTNFFGTRDVXT 122
Query: 179 SMVPLLEKAAPDARVITVSS----GGMYTAHLTDDLEFNSGSFDG------MEQYARNKR 228
            ++PL++   P  RV+ VSS      + +       +F S +         M ++  + +
Sbjct: 123 ELLPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 179
Query: 229 VQVALTEKW-----------------------SEMYKEKGIGFYSMHPGWAET----PGV 261
             V   E W                       SE  K   I   +  PGW  T    P  
Sbjct: 180 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 239
Query: 262 AKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE 295
            KS               EEGA+T ++LAL P +
Sbjct: 240 TKS--------------PEEGAETPVYLALLPPD 259

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 16/215 (7%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R   +  ++TG  +G+G ATA  LA+ GA + +V  S E  E + +A+     +  V   
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTY 174
           + D+S   +++++    + +   +    NNAG+          T+  F+   ++N+ G +
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              E ++ ++ +      V T S GG+                     YA  K   V LT
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIR-------------GIGNQSGYAAAKHGVVGLT 176
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN 269
              +  Y   GI   ++ PG   TP V  SM   +
Sbjct: 177 RNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD 211

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 34/253 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G + + L +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGMALNV 67
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNA +  +N L  +  E +      N+   + 
Sbjct: 68  TNPESIEAVLKAITDEFG----GVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           ++++++  + K     R+I V S  G M  A              G   YA  K   +  
Sbjct: 124 LSKAVLRGMMK-KRQGRIINVGSVVGTMGNA--------------GQANYAAAKAGVIGF 168
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFAGNLRTSEEGADTVL 287
           T+  +     +G+   ++ PG+ ET  + K++       +  +  AG L    E A  V 
Sbjct: 169 TKSMAREVASRGVTVNTVAPGFIETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVA 227
Query: 288 WLALQPKEKLVSG 300
           +LA  P+   ++G
Sbjct: 228 FLA-SPEAAYITG 239

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 87
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 145
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 146 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 188
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 189 KALGLELARTGITVNAVCPGFVETP 213

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 33/274 (12%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G++ VVTG   GIG   A   A  GA V +  RS    +  ++ +  + G+  V    
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKVIGVQ 66
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTI 176
            D+S   +  + A R   +   + V+  NAGV  +  L T    +LN  FAVNV GT+  
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYA 126
Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
            ++ +  L  A+   RV+  SS    T  +T         + G   Y   K  Q+     
Sbjct: 127 VQACLDAL-IASGSGRVVLTSS---ITGPIT--------GYPGWSHYGATKAAQLGFMRT 174
Query: 237 WSEMYKEKGIGFYSMHPGWAETPGV-----------AKSMPSFNERFAGNLRTSEEGADT 285
            +       I   ++ PG   T G+           A+S+P      AG L T E+    
Sbjct: 175 AAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIP------AGALGTPEDIGHL 228
Query: 286 VLWLALQPKEKLVSGSFYFDRAEA-PKHLKFAAT 318
             +LA +    +   +   D  +  P+ L   AT
Sbjct: 229 AAFLATKEAGYITGQAIAVDGGQVLPESLDAIAT 262

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTG + GIG   A+GL   GA V++  R  E    A +A R     +   +  
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA--CADTATRLSAYGDCQAIP- 83
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            DLSS    +  A      +  + +LVNNAG      L      G+E    +NV   ++ 
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143
Query: 177 TESMVPLLEKAAP---DARVITVSS 198
            + ++PLL ++A     ARVI + S
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGS 168

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  + G+  +VTGA  GIG  T + L + GA V  V R++   +   S +R   G E V
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---SLVRECPGIEPV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLG 172
            ++L D  +         R      PV +LVNNA V  L+    +T E F+ +F VN+  
Sbjct: 58  CVDLGDWEA-------TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110
Query: 173 TYTITESMV-PLLEKAAPDARVITVSS 198
              +++ +   L+ +  P A ++ VSS
Sbjct: 111 VIQVSQIVARGLIARGVPGA-IVNVSS 136

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 83
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 141
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 142 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 184
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 185 KALGLELARTGITVNAVCPGFVETP 209

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA +GIG   A  L   G  V++  R +E   T L  +R + G E      CD+ S+
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVE-ADGRTCDVRSV 67
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE-GFELNFAV---NVLGTYTITESM 180
            EI++       +  PV VLVNNAG        T+E   EL   V   N+ G + +T+ +
Sbjct: 68  PEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQV 125
Query: 181 VP---LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---YARNKRVQVALT 234
           +    +LE+     R++ ++S               +G   G+     Y+ +K   V  T
Sbjct: 126 LKAGGMLERGT--GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVGFT 168
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP 259
           +         GI   ++ PG+ ETP
Sbjct: 169 KALGLELARTGITVNAVCPGFVETP 193

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 35/258 (13%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK  +VTGA AGIG A A  LA  G   +++C   +      +A +   G     +  
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEG--CHVLCADIDGDAADAAATKIGCGAAACRV-- 82
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            D+S   +I +  +        V  LV NAGV+    LI  T E F+   A+N+ G +  
Sbjct: 83  -DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC 141
Query: 177 TESMVP-LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           T+   P ++E+      ++ +SS       L   +        G   Y  +K   + L+ 
Sbjct: 142 TKHAAPRMIERGG--GAIVNLSS-------LAGQVAVG-----GTGAYGMSKAGIIQLSR 187
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN------------ERFAGNLRTSEEGA 283
             +   +  GI   ++ P + +TP    +M  F+             R  G +   EE A
Sbjct: 188 ITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMA 247
Query: 284 DTVLWLALQPKEKLVSGS 301
             V++L L     +++G+
Sbjct: 248 GIVVFL-LSDDASMITGT 264

>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  KN +   A  GIG  T+  L  R    +++    E   TAL+ +++     N+    
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHT 61
Query: 119 CDLS-SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
            D++  + E K    +   + K V +L+N AG+L+++++      E   A+N  G    T
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQI------ERTIAINFTGLVNTT 115
Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
            +++   +K             G   A++     FN+     +  Y+ +K   V+ T   
Sbjct: 116 TAILDFWDKRK--------GGPGGIIANICSVTGFNA--IHQVPVYSASKAAVVSFTNSL 165
Query: 238 SEMYKEKGIGFYSMHPGWAETPGV 261
           +++    G+  YS++PG   TP V
Sbjct: 166 AKLAPITGVTAYSINPGITRTPLV 189

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  + G+  +VTGA  GIG  T + L + GA V  V R++   +   S +R   G E V
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---SLVRECPGIEPV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLG 172
            ++L D  +         R      PV +LVNNA V  L+    +T E F+ +F VN+  
Sbjct: 58  CVDLGDWEA-------TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110
Query: 173 TYTITESMV-PLLEKAAPDARVITVSS 198
              +++ +   L+ +  P A ++ VSS
Sbjct: 111 VIQVSQIVARGLIARGVPGA-IVNVSS 136

>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 245

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  + G+  +VTGA  GIG  T + L + GA V  V R++   +   S +R   G E V
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---SLVRECPGIEPV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLG 172
            ++L D  +         R      PV +LVNNA V  L+    +T E F+ +F VN+  
Sbjct: 58  CVDLGDWEA-------TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110
Query: 173 TYTITESMV-PLLEKAAPDARVITVSS 198
              +++ +   L+ +  P A ++ VSS
Sbjct: 111 VIQVSQIVARGLIARGVPGA-IVNVSS 136

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 25/249 (10%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA---LSAIRSKTG- 110
           MQ R+     +VTGA +GIG A +  LA  GATV      +   +     L    SK G 
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 111 -NENVHLELCDLSSITEIKSFANRF-SLKNKPVHVLVNNAGVLENNRLI--TSEGFELNF 166
              N      D+S     +    +  +  ++P  V+V+ AG+ ++  L+  + + ++   
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 120
Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           AVN+ GT+ +T++    L        +I +SS           +    G+  G   YA +
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISS-----------IVGKVGNV-GQTNYAAS 168
Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEE 281
           K   + LT+  +      GI   S+ PG+  TP   K      ++       G+L   E+
Sbjct: 169 KAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPED 228
Query: 282 GADTVLWLA 290
            AD V +LA
Sbjct: 229 VADVVAFLA 237

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRSKTGNEN---V 114
           ++GK  VVTG+ +GIG   A  LA++GA + +       G+ A +  +R+    ++   V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL----NGFGDAAEIEKVRAGLAAQHGVKV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVL 171
             +  DLS    ++   +    +   + +LVNNAG+ ++  LI    +E ++   A+N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDFPTEKWDAILALNLS 116
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
             +  T + +P ++K     R+I ++S     A                  Y   K   V
Sbjct: 117 AVFHGTAAALPHMKKQGF-GRIINIASAHGLVASANK------------SAYVAAKHGVV 163
Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
             T+  +     +GI   ++ PGW  TP V K + +  E+
Sbjct: 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK 203

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHL 116
           R   K  ++TG++ GIG ATA   A  GA V +  R  E+  ET    + +    +NV+ 
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG-VLENNRLITS-----EGFELNFAVNV 170
            + D+++        +    K   + +LVNNAG  + +++  T      E ++    +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
                +T+  VP L     +   I+  + G+   H T D  + S +   ++QY RN  + 
Sbjct: 123 RSVIALTKKAVPHLSSTKGEIVNISSIASGL---HATPDFPYYSIAKAAIDQYTRNTAID 179
Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETP-GVAKSMP-SFNERFAGNLRTSEE 281
           +           + GI   S+ PG   T  G A  MP   +++F   + T +E
Sbjct: 180 LI----------QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE 222

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           ++ +VTG N GIG A A   A  G  V +  RS E  E  L+               CD+
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAV-------------KCDI 68
Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITES 179
           +   +++         + PV VL+ NAGV ++  L  ++ E F      N+ GT+ + + 
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKR 128
Query: 180 MVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
               + + A   RV+ +SS  G + +A              G   YA +K   V      
Sbjct: 129 ANRAMLR-AKKGRVVLISSVVGLLGSA--------------GQANYAASKAGLVGFARSL 173
Query: 238 SEMYKEKGIGFYSMHPGWAET 258
           +     + I F  + PG+ +T
Sbjct: 174 ARELGSRNITFNVVAPGFVDT 194

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 26/260 (10%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           E K  +VTGA  GIG   A+ LA   + V  + R+++  ++ +  I+S  G E+      
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-FGYESSGYA-G 100
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           D+S   EI    N+   ++K V +LVNNAG+  +N  +   ++ +E     N+   + IT
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 160
Query: 178 ESMVPLLEKAAPD--ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +   P+ ++   +   R+I +SS       LT ++        G   Y+ +K   +  T+
Sbjct: 161 Q---PISKRMINNRYGRIINISS----IVGLTGNV--------GQANYSSSKAGVIGFTK 205
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----AGNLRTSEEGADTVLWLA 290
             ++    + I   ++ PG+  +    K      +       AG + T EE A+   +L+
Sbjct: 206 SLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS 265
Query: 291 LQPKEKLVSGSFYFDRAEAP 310
                 +    F  D   +P
Sbjct: 266 SDKSGYINGRVFVIDGGLSP 285

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 103/262 (39%), Gaps = 54/262 (20%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK------ 108
           + +R+EGK  +VTGA++GIG A A   A  GA V +  R+      AL+ +  +      
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG----NALAELTDEIAGGGG 57
Query: 109 --------TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS- 159
                    G+E +H  L +L+    ++ F          +    NNAG L     I+S 
Sbjct: 58  EAAALAGDVGDEALHEALVELA----VRRFGG--------LDTAFNNAGALGAMGEISSL 105
Query: 160 --EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF 217
             EG+      N+   +   +  VP           I    GG  T   T     ++  F
Sbjct: 106 SVEGWRETLDTNLTSAFLAAKYQVP----------AIAALGGGSLT--FTSSFVGHTAGF 153
Query: 218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET-------PGVAKSMPSFNE 270
            G+  YA +K   + L +  +     +GI   ++ PG  +T       PG A     F E
Sbjct: 154 AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVE 213
Query: 271 RFAGNLRTS--EEGADTVLWLA 290
                 R +  EE A+  L+LA
Sbjct: 214 GLHALKRIARPEEIAEAALYLA 235

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTGA  GIG A A  LA+ GATV +   + E  + A ++I  K         
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA-----RAI 57
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVNVLG 172
             D+S    +K+           + +LVNNA ++     +  +  +L+       VN+ G
Sbjct: 58  AADISDPGSVKALFAEIQALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVNLTG 114
Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           T+ +T +    +  A    RVI+++S             F +G+ + M  Y   K   + 
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIASN-----------TFFAGTPN-MAAYVAAKGGVIG 162
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF 272
            T   +    +  I   ++ PG  E+ GV K+ P  NE F
Sbjct: 163 FTRALATELGKYNITANAVTPGLIESDGV-KASP-HNEAF 200

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA+ GIG A A  L  +G  V    R+    E   +  +S      +    CDLS+ 
Sbjct: 36  LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT-ESMV 181
            +I S  +    ++  V + +NNAG+   + L+  ++ G++  F VNVL     T E+  
Sbjct: 96  EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQ 155
Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
            + E+   D  +I ++S    + H    L  +   F     Y+  K    ALTE   +  
Sbjct: 156 SMKERNVDDGHIININS---MSGHRV--LPLSVTHF-----YSATKYAVTALTEGLRQEL 205
Query: 242 KEKG--IGFYSMHPGWAET 258
           +E    I    + PG  ET
Sbjct: 206 REAQTHIRATCISPGVVET 224

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +EGK  +VTGA+ GIG A AE LA RGA V     S E G  A+S      G +   L +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNG-KGXALNV 64
Query: 119 CDLSSITEI-KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYT 175
            +  SI  + K+  + F      V +LVNNAG+  +N L   +  E +     N+   + 
Sbjct: 65  TNPESIEAVLKAITDEFG----GVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFR 120
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++++++    K     R+I V S               +    G   YA  K   +  T+
Sbjct: 121 LSKAVLRGXXK-KRQGRIINVGS------------VVGTXGNAGQANYAAAKAGVIGFTK 167
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVA-----KSMPSFNERFAGNLRTSEEGADTVLWLA 290
             +     +G+   ++ PG+ ET         +   +  +  AG L    E A  V +LA
Sbjct: 168 SXAREVASRGVTVNTVAPGFIETDXTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA 227
Query: 291 LQPKEKLVSG 300
             P+   ++G
Sbjct: 228 -SPEAAYITG 236

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++GK  +VTG+ AGIG A A  L + GA V +  R +E     +  IR++  +  +   
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           + DL +    +    ++      V +L+NN G+ E      I  E +   F VN+     
Sbjct: 67  VADLGTEQGCQDVIEKYP----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVR 122
Query: 176 ITES-MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
           +T S +   +E+   + RVI ++S     A +    E           Y+  K  Q++L+
Sbjct: 123 LTRSYLKKXIERK--EGRVIFIAS----EAAIXPSQE--------XAHYSATKTXQLSLS 168
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
              +E+     +   ++ PG   T GV   + S 
Sbjct: 169 RSLAELTTGTNVTVNTIXPGSTLTEGVETXLNSL 202

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRSKTGNEN---V 114
           ++GK  VVTG+ +GIG   A  LA++GA + +       G+ A +  +R+    ++   V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL----NGFGDAAEIEKVRAGLAAQHGVKV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVL 171
             +  DLS    ++   +    +   + +LVNNAG+ ++  LI    +E ++   A+N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDFPTEKWDAILALNLS 116
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
             +  T + +P ++K     R+I ++S     A                  Y   K   V
Sbjct: 117 AVFHGTAAALPHMKKQGF-GRIINIASAHGLVASANK------------SAYVAAKHGVV 163
Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
             T+  +     +GI   ++ PGW  +P V K + +  E+
Sbjct: 164 GFTKVTALETAGQGITANAICPGWVRSPLVEKQISALAEK 203

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 17/209 (8%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI--RSKTGNENVHLELCDLS 122
           ++TGA+ GIG   A GLA+ G  V ++ RSK+  E     I   +K   E + L L D++
Sbjct: 11  IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPL-DIT 69
Query: 123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS-EGFELNFAVNVLGTYTITESMV 181
             T+  +       K   V +LVN A    +  L    + F     +NV+  Y I +++ 
Sbjct: 70  DCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQYGILKTVT 129
Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
             + K   +  +  V+S             F  G   G  ++A      + L E      
Sbjct: 130 E-IXKVQKNGYIFNVASRAAKYG-------FADGGIYGSTKFAL-----LGLAESLYREL 176
Query: 242 KEKGIGFYSMHPGWAETPGVAKSMPSFNE 270
              GI   ++ PGW  T    K+   F +
Sbjct: 177 APLGIRVTTLCPGWVNTDXAKKAGTPFKD 205

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTGA+ GIG+  A  LAS+GATV     S+   E   ++ + K G +   L L ++
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEK-GFKARGLVL-NI 63
Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENN 154
           S I  I++F      +N  + +LVNNAG+  +N
Sbjct: 64  SDIESIQNFFAEIKAENLAIDILVNNAGITRDN 96

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRSKTGNEN---V 114
           ++GK  VVTG+ +GIG   A  LA++GA + +       G+ A +  +R+    ++   V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVL----NGFGDAAEIEKVRAGLAAQHGVKV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVL 171
             +  DLS    ++   +    +   + +LVNNAG+ ++  LI    +E ++   A+N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-QHTALIEDFPTEKWDAILALNLS 116
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
             +  T + +P ++K     R+I ++S     A                  Y   K   V
Sbjct: 117 AVFHGTAAALPHMKKQGF-GRIINIASAHGLVASANK------------SAYVAAKHGVV 163
Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
             T+  +     +GI   ++ PGW   P V K + +  E+
Sbjct: 164 GFTKVTALETAGQGITANAICPGWVRAPLVEKQISALAEK 203

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 23/247 (9%)
Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           S +++P+  Q  +  +  +VTGA+ GIG   A   A  GATV ++ R++EK     S I 
Sbjct: 2   SLHYQPK--QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN 59
Query: 107 SKTGNENVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG---F 162
            +TG +     L  L+  +E  +  A R ++    +  +++NAG+L +   ++ +    +
Sbjct: 60  EETGRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVW 119
Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ 222
           +    VNV  T+ +T++++PLL K+   + V T SS G            N G+      
Sbjct: 120 QDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-------RANWGA------ 166
Query: 223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEG 282
           YA +K     + +  ++ Y+++ +    ++PG   T   A + P+ + +    L+T  + 
Sbjct: 167 YAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQ---KLKTPADI 222
Query: 283 ADTVLWL 289
               LWL
Sbjct: 223 MPLYLWL 229

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  ++TGA  GIG  TA   A   + + +   +K   E   +A + K     VH  +
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE--TAAKCKGLGAKVHTFV 86
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG--FELNFAVNVLGTYTI 176
            D S+  +I S A +   +   V +LVNNAGV+  + L  ++    E  F VNVL  +  
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWT 146
Query: 177 TESMVPLLEKAAPDARVITVSS 198
           T++ +P + K      ++TV+S
Sbjct: 147 TKAFLPAMTKNN-HGHIVTVAS 167

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 24/227 (10%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG   GIG A A      GA V +  R  + GE A  ++ +    +    +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 118 LCDLSSITEIKSFANRFSLKNK---PVHVLVNNAGVLENNRL---ITSEGFELNFAVNVL 171
             D    T++      F    K   PV  LVNNAG+  N  +    T+E  +L  AVN+ 
Sbjct: 63  SSDEDGWTKL------FDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL-LAVNLD 115
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G +  T   +  ++     A +I +SS   +        + + G+++  +   R      
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG------DPSLGAYNASKGAVRIMSKSA 169
Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRT 278
           AL        K+  +   ++HPG+ +TP +   +P   E  +   +T
Sbjct: 170 AL----DCALKDYDVRVNTVHPGYIKTP-LVDDLPGAEEAMSQRTKT 211

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 24/227 (10%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG   GIG A A      GA V +  R  + GE A  ++ +    +    +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 118 LCDLSSITEIKSFANRFSLKNK---PVHVLVNNAGVLENNRL---ITSEGFELNFAVNVL 171
             D    T++      F    K   PV  LVNNAG+  N  +    T+E  +L  AVN+ 
Sbjct: 63  SSDEDGWTKL------FDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL-LAVNLD 115
Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G +  T   +  ++     A +I +SS   +        + + G+++  +   R      
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG------DPSLGAYNASKGAVRIMSKSA 169
Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRT 278
           AL        K+  +   ++HPG+ +TP +   +P   E  +   +T
Sbjct: 170 AL----DCALKDYDVRVNTVHPGYIKTP-LVDDLPGAEEAMSQRTKT 211

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   + GK  +VTGA  GIG A AE L  +GA V +V  + E G    +A+  +   +  
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 60
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTY 174
               CD++   +++    +       + +LVNNAGV  NN     +  ++N    + GTY
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--NNEKNWEKTLQINLVSVISGTY 118
Query: 175 TITESM 180
              + M
Sbjct: 119 LGLDYM 124

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM---------VCRSKEKGETALSAIRSK 108
           R +G+  +VTGA AG+G A A   A RGA V +         V +     +  +  IR +
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 109 TGNENVHLELCDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
            G       + +  S+ E    +K+  + F      + V+VNNAG+L +     I+ E +
Sbjct: 87  GGK-----AVANYDSVEEGEKVVKTALDAFG----RIDVVVNNAGILRDRSFARISDEDW 137
Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
           ++   V++ G++ +T +    ++K      ++T S+ G+Y
Sbjct: 138 DIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIY 177

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 23/245 (9%)
Query: 49  NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK 108
           +++P+  Q  +  +  +VTGA+ GIG   A   A  GATV ++ R++EK     S I  +
Sbjct: 2   HYQPK--QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 59
Query: 109 TGNENVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG---FEL 164
           TG +     L  L+  +E  +  A R ++    +  +++NAG+L +   ++ +    ++ 
Sbjct: 60  TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQD 119
Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
              VNV  T+ +T++++PLL K+   + V T SS G            N G+      YA
Sbjct: 120 VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-------RANWGA------YA 166
Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGAD 284
            +K     + +  ++ Y+++ +    ++PG   T   A + P+ + +    L+T  +   
Sbjct: 167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQ---KLKTPADIMP 222
Query: 285 TVLWL 289
             LWL
Sbjct: 223 LYLWL 227

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 27/240 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTGA  G+G A A  L ++GA V +    +EK    L  + ++ G E + +  
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEK----LKELAAELG-ERIFVFP 59
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            +LS    +K+   +   +   V +LVNNAG+  +   +  + E ++    VN+   + +
Sbjct: 60  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNL 119
Query: 177 TESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           T  +  P++ +   + R+I ++S    T +             G   Y  +K   +  ++
Sbjct: 120 TRELTHPMMRR--RNGRIINITSIVGVTGN------------PGQANYCASKAGLIGFSK 165
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEG-----ADTVLWLA 290
             ++    + +    + PG+ E+    K      +   GN+     G     A  V++LA
Sbjct: 166 SLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVVYLA 225

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 27/240 (11%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTGA  G+G A A  L ++GA V +    +EK    L  + ++ G E + +  
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEK----LKELAAELG-ERIFVFP 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            +LS    +K+   +   +   V +LVNNAG+  +   +  + E ++    VN+   + +
Sbjct: 63  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNL 122
Query: 177 TESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           T  +  P++ +   + R+I ++S    T +             G   Y  +K   +  ++
Sbjct: 123 TRELTHPMMRR--RNGRIINITSIVGVTGN------------PGQANYCASKAGLIGFSK 168
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEG-----ADTVLWLA 290
             ++    + +    + PG+ E+    K      +   GN+     G     A  V++LA
Sbjct: 169 SLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVVYLA 228

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 65  VVTGANAGIGYATAEGLASRGAT---VYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           ++TG N G+G    + L +       ++  CR++E+ +      ++ +   N+H+   DL
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS---NIHILEIDL 81
Query: 122 SSITEIKSFANRFS--LKNKPVHVLVNNAGVLENNRLIT---SEGFELNFAVNVLGTYTI 176
            +               K++ ++VL NNAG+   +  IT   S+        N +    +
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXL 141
Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG-MEQYARNKRVQVALTE 235
            ++ +PLL+KAA          G     + +  L    G+ DG    Y  +K    A T+
Sbjct: 142 AKACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKSALNAATK 201
Query: 236 KWS-EMYKEKGIGFYSMHPGWAETPGVAKSMP 266
             S ++Y ++ I   S+HPGW +T     S P
Sbjct: 202 SLSVDLYPQR-IXCVSLHPGWVKTDXGGSSAP 232

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++ K  +VTG   GIG+A  E  A  GA ++   R++ +    LS  + K     V   +
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSV 69
Query: 119 CDLSSITEIKSFANRF-SLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
           CD S   E +       S+    + +L+NN G + +   +  T+E F  + + N+   Y 
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++   PLL+ +     +   S  G+ +A +        G+ +   Q ARN      L  
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALN---QLARN------LAC 180
Query: 236 KWSEMYKEKGIGFYSMHPGWAETP 259
           +W+      GI   ++ P    TP
Sbjct: 181 EWA----SDGIRANAVAPAVIATP 200

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 101/284 (35%), Gaps = 42/284 (14%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV--------CRSKEKG--ETA 101
           P  M  ++EG+   +TGA  G G A A  +A+ GA +  V        C   +    +  
Sbjct: 2   PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL 61
Query: 102 LSAIR-SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--IT 158
              +R  +  N  +   + D      ++   +        + ++V NAGV        IT
Sbjct: 62  SETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDIT 121
Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSF 217
            E F     +NV GT+    +  P + +      +I +SS  GM                
Sbjct: 122 PEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF----------- 170
Query: 218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP-GVAKSMPSFNERFAGNL 276
             M  Y  +K     L   ++    +  I   S+HPG   TP G    + +  +    N 
Sbjct: 171 --MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNP 228
Query: 277 RTS--------------EEGADTVLWLALQPKEKLVSGSFYFDR 306
           + S              E+ ADTV WLA     K+ +     D+
Sbjct: 229 QLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ 272

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 125/317 (39%), Gaps = 58/317 (18%)
Query: 19  MFLLKKWRVAAFGVY-GYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYAT 77
           M  +KK+ +   G++  Y  ++ N      + F+PE +Q    GK  +VTGA+ GIG   
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSAN------EEFRPEMLQ----GKKVIVTGASKGIGREM 50
Query: 78  AEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK 137
           A  LA  GA V +  RSKE  +  +S    + G  + H     ++   E  +FA +F  +
Sbjct: 51  AYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHY----IAGTMEDMTFAEQFVAQ 105
Query: 138 NKPV----------HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA 187
              +          H+   +  +  ++     +  E+NF    L    +T + +P+L+++
Sbjct: 106 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNF----LSYVVLTVAALPMLKQS 161
Query: 188 APDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNK----RVQVALTEKWSEMYK 242
             +  ++ VSS  G     L      +  + DG     R +    RV V++T        
Sbjct: 162 --NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV----- 214
Query: 243 EKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGADTVLWLALQPK-- 294
              +G            G+     +  E  A      G LR  E   D+  W  L  +  
Sbjct: 215 ---LGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSRWTTLLIRNP 271
Query: 295 -----EKLVSGSFYFDR 306
                E+L S S+  DR
Sbjct: 272 SRKILEELYSTSYNMDR 288

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 58/317 (18%)
Query: 19  MFLLKKWRVAAFGVY-GYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYAT 77
           M  +KK+ +   G++  Y  ++ N      + F+PE +Q    GK  +VTGA+ GIG   
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSAN------EEFRPEMLQ----GKKVIVTGASKGIGREM 50
Query: 78  AEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK 137
           A  LA  GA V +  RSKE  +  +S    + G  + H     ++   E  +FA +F  +
Sbjct: 51  AYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHY----IAGTMEDMTFAEQFVAQ 105
Query: 138 NKPV----------HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA 187
              +          H+   +  +  ++     +  E+NF    L    +T + +P+L+++
Sbjct: 106 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNF----LSYVVLTVAALPMLKQS 161
Query: 188 APDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNK----RVQVALTEKWSEMYK 242
             +  ++ VSS  G     L      +  + DG     R +    RV V++T        
Sbjct: 162 --NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV----- 214
Query: 243 EKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGADTVLWLALQPK-- 294
              +G            G+     +  E  A      G LR  E   D+  W  L  +  
Sbjct: 215 ---LGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSRWTTLLIRNP 271
Query: 295 -----EKLVSGSFYFDR 306
                E+L S S+ +DR
Sbjct: 272 SRKILEELYSTSYNWDR 288

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+    G   +VTGA  GIG  T + L + GA V  V R+       +S  +   G E V
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD---LVSLAKECPGIEPV 57
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLG 172
            ++L D  + TE K+          PV +LVNNA   +++    +T E F+ +F+VN+  
Sbjct: 58  CVDLGDWDA-TE-KALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRS 110
Query: 173 TYTITESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            + +++ +   ++ +  P + ++ VSS     AH+T         F  +  Y+  K    
Sbjct: 111 VFQVSQMVARDMINRGVPGS-IVNVSS---MVAHVT---------FPNLITYSSTKGAMT 157
Query: 232 ALTEKWSEMYKEKGIGFYSMHP 253
            LT+  +       I   S++P
Sbjct: 158 MLTKAMAMELGPHKIRVNSVNP 179

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 28/261 (10%)
Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSK 108
           F+       + GK   VTG + GIG A A+ LA  GA V +    + E+ +  +S I   
Sbjct: 20  FQSXXTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA 79
Query: 109 TGNE-NVHLELCDLSSITEIKSFANRFSLKN-KPVHVLVNNAGVLENNRL--ITSEGFEL 164
            G    +  +  D  +I +    A R +++    + +LVN+AG+  +  L   T   F+ 
Sbjct: 80  GGRAVAIRADNRDAEAIEQ----AIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDE 135
Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
             AVN    +    S    L       R+IT+   G   A L          + G+  Y+
Sbjct: 136 VXAVNFRAPFVAIRSASRHLGDG---GRIITI---GSNLAELV--------PWPGISLYS 181
Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET---PGVAKSMPSFNERFA-GNLRTSE 280
            +K     LT+  +     +GI    +HPG  +T   P       +  ER A G+    +
Sbjct: 182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRERIATGSYGEPQ 241
Query: 281 EGADTVLWLALQPKEKLVSGS 301
           + A  V WLA  P+ K V+G+
Sbjct: 242 DIAGLVAWLA-GPQGKFVTGA 261

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  ++TGA+ GIG   A  L   GA + +  R + + E   + IR   G      ++ D+
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDV 62
Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITES 179
           +    + +FA         + VLVNNAGV+  + L  +  + +E    VN+ G      +
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 180 MVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFNSGSF-DGMEQYARNKRV 229
           ++P++E A    ++I + S G    + TA +    +F   +  DG+ Q + N RV
Sbjct: 123 VLPIME-AQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQESTNIRV 176

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 31/246 (12%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT------GNENVH 115
           K  V+TG+ +GIG A A  LA  GA + +       G  A   IR+ T       +  V 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVL------NGFGAPDEIRTVTDEVAGLSSGTVL 79
Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLGT 173
               D +  +EI       + +     +LVNNAGV  +E       E ++   AVN+  +
Sbjct: 80  HHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS 139
Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           +      +P  +K     R+I ++S     AH      F S        Y   K     L
Sbjct: 140 FHTIRGAIPPXKKKGW-GRIINIAS-----AHGLVASPFKSA-------YVAAKHGIXGL 186
Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP 293
           T+  +    E G+   S+ PG+  TP V K +P    R  G    +EE     + L  QP
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPLVEKQIPD-QARTRG---ITEEQVINEVXLKGQP 242
Query: 294 KEKLVS 299
            +K ++
Sbjct: 243 TKKFIT 248

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G +TA+ L  +GAT  ++     +GET      +K    N     
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET-----EAKKLGGNCIFAP 61
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL--------ENNRLITSEGFELNFAVNV 170
            +++S  E+++       K   + V VN AG+         + N++ T E F+    VN+
Sbjct: 62  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 121
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +  ++ +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 122 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 169
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           +K   V +T   +      GI   ++ PG   TP
Sbjct: 170 SKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATP 203

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G +TA+ L  +GAT  ++     +GET      +K    N     
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET-----EAKKLGGNCIFAP 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL--------ENNRLITSEGFELNFAVNV 170
            +++S  E+++       K   + V VN AG+         + N++ T E F+    VN+
Sbjct: 63  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 122
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +  ++ +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 123 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 170
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           +K   V +T   +      GI   ++ PG   TP
Sbjct: 171 SKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATP 204

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 64  CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
            ++TGA +GIG ATA  LA+ G TV  + R++ + E     I    G + + LE  D+S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-AGGQAIALE-ADVSD 88
Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS-EGFELN--FAVNVLGTYTITESM 180
             + ++      LK   + ++V NAG+      I   + FE +   AVN+ GT+      
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 181 VPLLEKAAPDARVITVSSGGMYT 203
           VP L++    A V+  S  G  T
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRT 171

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M   ++ +  +VTGA+ GIG A A  LA RGA V     + E G   + A   + G 
Sbjct: 19  PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA-TTEAGAEGIGAAFKQAGL 77
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAV--N 169
           E     + +++  T + +       +   ++VLVNNAG+ ++   +  +  E +  +  N
Sbjct: 78  EG-RGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTN 136
Query: 170 VLGTYTITESMV-PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
           +   + ++ +++ P+++  A   R++ ++S               S    G   YA  K 
Sbjct: 137 LKAVFRLSRAVLRPMMK--ARGGRIVNITS------------VVGSAGNPGQVNYAAAKA 182
Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF------AGNLRTSEEG 282
               +T   +     +GI    + PG+ +T  + K +P   +         G L + E+ 
Sbjct: 183 GVAGMTRALAREIGSRGITVNCVAPGFIDTD-MTKGLPQEQQTALKTQIPLGRLGSPEDI 241
Query: 283 ADTVLWLALQPKEKLVSGS 301
           A  V +LA  P+   ++G+
Sbjct: 242 AHAVAFLA-SPQAGYITGT 259

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G +TA+ L  +GAT  ++     +GET      +K    N     
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET-----EAKKLGGNCIFAP 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL--------ENNRLITSEGFELNFAVNV 170
            +++S  E+++       K   + V VN AG+         + N++ T E F+    VN+
Sbjct: 63  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 122
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +  ++ +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 123 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 170
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP 259
           +K   V +T   +      GI   ++ PG   TP
Sbjct: 171 SKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATP 204

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G ATAE L  +GA+  ++      GE    A   K GN N     
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKKLGN-NCVFAP 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--------LENNRLITSEGFELNFAVNV 170
            D++S  ++++       K   V V VN AG+        L+  +  T E F+    VN+
Sbjct: 63  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 122
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +   + +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 123 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 170
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
           +K   V +T   +      GI   ++ PG   TP +  S+P
Sbjct: 171 SKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP-LLTSLP 210

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 21/229 (9%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA+ GIG   A   A  GATV ++ R++EK     S I  +TG +     L  L+  
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 73
Query: 125 TE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG---FELNFAVNVLGTYTITESM 180
           +E  +  A R  +    +  +++NAG+L +   ++ +    ++    +NV  T+ +T+++
Sbjct: 74  SENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLTQAL 133
Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
           +PLL K+   + V T SS G            N G+      YA +K     + +  ++ 
Sbjct: 134 LPLLLKSDAGSLVFTSSSVGRQG-------RANWGA------YAASKFATEGMMQVLADE 180
Query: 241 YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWL 289
           Y+++ +    ++PG   T   A + P+ + +    L+T  +     LWL
Sbjct: 181 YQQR-LRVNCINPGGTRTAMRASAFPTEDPQ---KLKTPADIMPLYLWL 225

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTGA  GIG A A  LA+ GATV +   + E  + A ++I  K         
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA-----RAI 57
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVNVLG 172
             D+S    +K+           + +LVNNA ++     +  +  +L+       VN+ G
Sbjct: 58  AADISDPGSVKALFAEIQALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVNLTG 114
Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
           T+ +T +       A    RVI+++S
Sbjct: 115 TFIVTRAGTDQXRAAGKAGRVISIAS 140

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 49/286 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 8   EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 62
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 63  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 118
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 119 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 174
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 175 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 225
Query: 274 ------GNLRTSEEGADTVLWLAL---QPKEKLV----SGSFYFDR 306
                 G LR  E   D+ LW  L    P  K++    S S+  DR
Sbjct: 226 LEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 271

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 49/284 (17%)
Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    + 
Sbjct: 2   FRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-EL 56
Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLITS 159
           G  + H     ++   E  +FA +F  +   +          H+   +  +  ++     
Sbjct: 57  GAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVR 112
Query: 160 EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFNSG 215
           +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       + G
Sbjct: 113 KSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD-G 167
Query: 216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-- 273
            F  + +     RV V++T           +G            G+     +  E  A  
Sbjct: 168 FFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECALE 219
Query: 274 ----GNLRTSEEGADTVLWLAL---QPKEKLV----SGSFYFDR 306
               G LR  E   D+ LW  L    P  K++    S S+  DR
Sbjct: 220 IIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 263

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G ATAE L  +GA+  ++      GE    A   K GN N     
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKKLGN-NCVFAP 62
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--------LENNRLITSEGFELNFAVNV 170
            D++S  ++++       K   V V VN AG+        L+  +  T E F+    VN+
Sbjct: 63  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 122
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +   + +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 123 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 170
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
           +K   V +T   +      GI   ++ PG   TP +  S+P
Sbjct: 171 SKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP-LLTSLP 210

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 49/286 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 5   EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 59
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 60  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 115
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 116 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 171
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 172 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 222
Query: 274 ------GNLRTSEEGADTVLWLAL---QPKEKLV----SGSFYFDR 306
                 G LR  E   D+ LW  L    P  K++    S S+  DR
Sbjct: 223 LEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 268

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCD 120
           K+ +VTGA+ GIG + A  LA  G  V +    SKEK E  +  I++K G ++  ++  +
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQ-AN 68
Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAV--NVLGTYTITE 178
           ++   E+K+       +   + VLVNNAG+  +N L+  +  E +  +  N+ G +   +
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
              P + +    A +I +SS               +    G   Y   K   + LT+  +
Sbjct: 129 KATPQMLRQRSGA-IINLSS------------VVGAVGNPGQANYVATKAGVIGLTKSAA 175
Query: 239 EMYKEKGIGFYSMHPGW 255
                +GI   ++ PG+
Sbjct: 176 RELASRGITVNAVAPGF 192

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 49/286 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 19  EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 73
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 74  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 129
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 130 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 185
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 186 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 236
Query: 274 ------GNLRTSEEGADTVLWLAL---QPKEKLV----SGSFYFDR 306
                 G LR  E   D+ LW  L    P  K++    S S+  DR
Sbjct: 237 LEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 282

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA++G+G A    LA  GATV  +      GE   + + +      V     D+++ 
Sbjct: 11  IVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA-----VRFRNADVTNE 65
Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG------FELNFAVNVLGTYTITE 178
            +  +       +   VH LVN AG     +++   G      F    AVN++GT+    
Sbjct: 66  ADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNXIR 125
Query: 179 SMVPLLEKAAPDA---RVITVSSGGMYTAHLTDDLEFNSGSFD---GMEQYARNKRVQVA 232
               +  +  PDA   R + V++  +              +FD   G   YA +K    A
Sbjct: 126 LAAEVXSQGEPDADGERGVIVNTASI-------------AAFDGQIGQAAYAASKGGVAA 172
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL 276
           LT   +      GI   ++ PG  +TP  A       +  A ++
Sbjct: 173 LTLPAARELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASV 216

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 49/286 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 6   EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 60
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 61  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 116
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 117 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 172
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 173 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 223
Query: 274 ------GNLRTSEEGADTVLWLAL---QPKEKLV----SGSFYFDR 306
                 G LR  E   D+ LW  L    P  K++    S S+  DR
Sbjct: 224 LEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 269

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   V+TG  +G+G ATAE L  +GA+  ++      GE    A   K GN N     
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKKLGN-NCVFAP 64
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--------LENNRLITSEGFELNFAVNV 170
            D++S  ++++       K   V V VN AG+        L+  +  T E F+    VN+
Sbjct: 65  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 171 LGTYTITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +GT+ +   +   + +  PD       +I  +S   +   +            G   Y+ 
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSA 172
Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
           +K   V +T   +      GI   ++ PG   TP +  S+P
Sbjct: 173 SKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP-LLTSLP 212

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 32/252 (12%)
Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           S +++P+  Q  ++ +  +VTGA+ GIG   A   A  GATV ++ R++EK    L  + 
Sbjct: 2   SLHYQPK--QDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEK----LRRVA 55
Query: 107 SKTGNENVHLE----LCDLSSIT--EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSE 160
               +E  H++      DL + T  E +  A+R +     +  +++NAG+L     ++ +
Sbjct: 56  QHIADEQ-HVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQ 114
Query: 161 GFEL---NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF 217
             ++      VNV  T+ +T++++PLL K+   + V T SS G            N G+ 
Sbjct: 115 DPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-------RANWGA- 166
Query: 218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR 277
                YA +K     + +  ++ Y+ + +    ++PG   T   A + P+ + +    L+
Sbjct: 167 -----YATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQ---KLK 218
Query: 278 TSEEGADTVLWL 289
           T  +     LWL
Sbjct: 219 TPADIMPLYLWL 230

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE- 112
           D+ AR    + +VTG   GIG   A   A  GA V +  RS  +    LS++ ++ G   
Sbjct: 38  DLSAR----SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE----LSSVTAELGELG 89
Query: 113 -----NVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFEL 164
                 V L++ D  S  +  ++  + F      + V+  NAG+    RL  +T E    
Sbjct: 90  AGNVIGVRLDVSDPGSCADAARTVVDAFGA----LDVVCANAGIFPEARLDTMTPEQLSE 145
Query: 165 NFAVNVLGT-YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY 223
              VNV GT YT+   + PL   A+   RVI  SS    T  +T         + G   Y
Sbjct: 146 VLDVNVKGTVYTVQACLAPL--TASGRGRVILTSS---ITGPVT--------GYPGWSHY 192
Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV 261
             +K  Q+      +     +G+   ++ PG   T G+
Sbjct: 193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL 230

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  +  GK C+VTGA   IG ATA  LA  G  + ++  ++E  E A +++R K      
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNA---GVLENNRLITSEGFELNFAVNVL 171
           +  +CD++S   +    +        +  L NNA   G     +   S+ F     +NV 
Sbjct: 61  Y--VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVT 118
Query: 172 GTYTITESM 180
           G + + +++
Sbjct: 119 GAFHVLKAV 127

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TGA AGIG   A   A+ GA+V +   + +     +  I+   G       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFAC 65
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTI 176
            CD++S  E+ + A+    K   V +LVNNAG        +    F   + +NV   + +
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHL 125
Query: 177 TESMVPLLEK 186
           ++ + P +EK
Sbjct: 126 SQLVAPEMEK 135

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG+  GIG A AE     GA V +   + E      + I        + L+
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAAC--AIALD 59
Query: 118 LCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
           + D +SI   +    +R+      + +LVNNA + +   +  IT E ++  FA+NV GT 
Sbjct: 60  VTDQASIDRCVAELLDRWG----SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL 115
Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            + +++   +       ++I ++S
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMAS 139

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R++ K  V+TG   GIG A AE  A  GA + +          A +AIR+      V
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNL--GRRV 56
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNVLG 172
               CD+S   ++++F  +         +LVNNAG+  L     +T E ++  F +NV  
Sbjct: 57  LTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDS 116
Query: 173 TYTITESMVPLLEK 186
            + + ++ VP +++
Sbjct: 117 GFLMAKAFVPGMKR 130

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 46  HSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSA 104
           H +N     +  R++GK  +VTG+  GIG A A  L   GA V +    S +  E  +S 
Sbjct: 3   HVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE 62
Query: 105 IRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
           I++  G++ + ++  D+  + EI    ++       + + V+N+GV+    L  +T E F
Sbjct: 63  IKA-LGSDAIAIK-ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120
Query: 163 ELNFAVNVLGTYTI 176
           +  F++N  G + +
Sbjct: 121 DRVFSLNTRGQFFV 134

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 46  HSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSA 104
           H +N     +  R++GK  +VTG+  GIG A A  L   GA V +    S +  E  +S 
Sbjct: 3   HVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE 62
Query: 105 IRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
           I++  G++ + ++  D+  + EI    ++       + + V+N+GV+    L  +T E F
Sbjct: 63  IKA-LGSDAIAIK-ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120
Query: 163 ELNFAVNVLGTYTI 176
           +  F++N  G + +
Sbjct: 121 DRVFSLNTRGQFFV 134

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +E K  V+TGA+ GIG A A  LA  G  + +  RS ++ E     +  + G E  +  L
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL 81
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTI 176
            D+S    ++ F+ +   +   V V+V NAG+    RL      E +    VN+LG +  
Sbjct: 82  -DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRT 140
Query: 177 TESMVPLLEKAAPDARVIT 195
            ++ +  L++    A V T
Sbjct: 141 LKAFLDSLKRTGGLALVTT 159

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHL 116
           R   K  ++TG++ GIG  TA   A  GA V +  RS E+  ET    ++S    + V+ 
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS---EGFEL---NFAVNV 170
            + D+++        N    +   + VLVNNAG    +   T+   +G ++      +N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
                +T+ + P L   A    ++ VSS  +       D  + + +   ++QY R+  + 
Sbjct: 123 QAVIEMTKKVKPHL--VASKGEIVNVSS-IVAGPQAQPDFLYYAIAKAALDQYTRSTAID 179
Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAET 258
           +A          + GI   S+ PG  ET
Sbjct: 180 LA----------KFGIRVNSVSPGMVET 197

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
           A + G+ CVVTGA+ GIG   A  L   GATVY+  R  +         +S  G + V +
Sbjct: 1   APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-LGGQCVPV 59
Query: 117 ELCDLSSITEIKSFANRFSLKNKP-VHVLVNNA 148
            +CD S  +E++S   +   + +  + VLVNNA
Sbjct: 60  -VCDSSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++GK  +VTG+ +GIG   A+ LA  GA +  V         AL+ I ++ G + VH   
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANI--VLNGFGDPAPALAEI-ARHGVKAVH-HP 57
Query: 119 CDLSSITEIKSFANRFSLKNKP---VHVLVNNAGVLENNRLITSEGFELN-----FAVNV 170
            DLS + +I++    F+L  +    V +LVNNAG+     +   E F L       A+N+
Sbjct: 58  ADLSDVAQIEAL---FALAEREFGGVDILVNNAGI---QHVAPVEQFPLESWDKIIALNL 111
Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
              +  T   +P + +A    R+I ++S           +    GS  G   Y   K   
Sbjct: 112 SAVFHGTRLALPGM-RARNWGRIINIAS-----------VHGLVGS-TGKAAYVAAKHGV 158
Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM 265
           V LT+          +   ++ PGW  TP V K +
Sbjct: 159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI 193

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK  ++TGA++GIG A A  L   G+ V +   ++EK ++  +A++     +N  +E+
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEV 66
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
           C+L++  E  +  ++ S     + +LV NAG+  +   I    + F+    +N+   + +
Sbjct: 67  CNLANKEECSNLISKTS----NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 177 T-ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
             E++  +++K     R+I +SS                    G   Y  +K   + +T+
Sbjct: 123 NREAIKKMIQKRY--GRIINISS------------IVGIAGNPGQANYCASKAGLIGMTK 168
Query: 236 KWSEMYKEKGIGFYSMHPGWAET 258
             S     +GI   ++ PG+ ++
Sbjct: 169 SLSYEVATRGITVNAVAPGFIKS 191

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           E K  V+TGA+ GIG A A  LA  G  + +  RS ++ E     +  + G E  +  L 
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL- 59
Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTIT 177
           D+S    ++ F+ +   +   V V+V NAG+    RL      E +    VN+LG +   
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 119
Query: 178 ESMVPLLEKAAPDARVIT 195
           ++ +  L++    A V T
Sbjct: 120 KAFLDSLKRTGGLALVTT 137

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 45/274 (16%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 15  EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 69
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 70  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 125
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 126 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 181
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 182 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 232
Query: 274 ------GNLRTSEEGADTVLWLAL---QPKEKLV 298
                 G LR  E   D+ LW  L    P  K++
Sbjct: 233 LEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKIL 266

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 43/269 (15%)
Query: 43  FKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL 102
           F+ H + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +
Sbjct: 18  FQGHME-FRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 72
Query: 103 SAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLE 152
           S    + G  + H     ++   E  +FA +F  +   +          H+   +  +  
Sbjct: 73  SHCL-ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH 127
Query: 153 NNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTD 208
           ++     +  E+NF    L    +T + +P+L+++     V++  +G     M  A+   
Sbjct: 128 DDIHHVRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSAS 183
Query: 209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
               + G F  + +     RV V++T           +G            G+     + 
Sbjct: 184 KFALD-GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAP 234
Query: 269 NERFA------GNLRTSEEGADTVLWLAL 291
            E  A      G LR  E   D+ LW  L
Sbjct: 235 KEECALEIIKGGALRQEEVYYDSSLWTTL 263

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 49/286 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 19  EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 73
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 74  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 129
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG----MYTAHLTDDLEFN 213
             +  E+NF    L    +T + +P+L+++     V++  +G     M  A+       +
Sbjct: 130 VRKSMEVNF----LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 185
Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G F  + +     RV V++T           +G            G+     +  E  A
Sbjct: 186 -GFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEECA 236
Query: 274 ------GNLRTSEEGADTVLWLALQPK-------EKLVSGSFYFDR 306
                 G LR  E   D+  W  L  +       E+L S S+  DR
Sbjct: 237 LEIIKGGALRQEEVYYDSSRWTTLLIRNPCRKILEELYSTSYNMDR 282

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYM---------VCRSKEKGETALSAIRSK 108
           R +G+  +VTGA  G+G A A   A RGA V +         V +     +  +  IR +
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNF 166
            G    + +  +      +K+  + F      + V+VNNAG+L +     I+ E +++  
Sbjct: 66  GGKAVANYDSVEAGE-KLVKTALDTFG----RIDVVVNNAGILRDRSFSRISDEDWDIIQ 120
Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
            V++ G++ +T +     +K      + T S+ G+Y
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIY 156

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 51/287 (17%)
Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           + F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    
Sbjct: 5   EEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL- 59
Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPV----------HVLVNNAGVLENNRLI 157
           + G  + H     ++   E  +FA +F  +   +          H+   +  +  ++   
Sbjct: 60  ELGAASAHY----IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHH 115
Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGS 216
             +  E+NF    L    +T + +P+L+++  +  ++ VSS  G     L      +  +
Sbjct: 116 VRKSMEVNF----LSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPLVAAYSASKFA 169
Query: 217 FDGMEQYARNK----RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF 272
            DG     R +    RV V++T           +G            G+     +  E  
Sbjct: 170 LDGFFSSIRKEYSVSRVNVSITLCV--------LGLIDTETAMKAVSGIVHMQAAPKEEC 221
Query: 273 A------GNLRTSEEGADTVLWLALQPK-------EKLVSGSFYFDR 306
           A      G LR  E   D+  W  L  +       E+L S S+ +DR
Sbjct: 222 ALEIIKGGALRQEEVYYDSSRWTTLLIRNPSRKILEELYSTSYNWDR 268

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLE 117
           ++GK  +VTGA+ GIG A A  LA +GA V +    +++K    +  I+ K G++ + + 
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAIAVR 60
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D+++  ++ +   +       V +LVNNAGV ++N L  +  E ++     N+ G + 
Sbjct: 61  -ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
            T+++   + +     R++ ++S    T +             G   Y   K   + LT+
Sbjct: 120 CTKAVSRFMMR-QRHGRIVNIASVVGVTGN------------PGQANYVAAKAGVIGLTK 166
Query: 236 KWSEMYKEKGIGFYSMHPGWAET 258
             ++    + I   ++ PG+  T
Sbjct: 167 TSAKELASRNITVNAIAPGFIAT 189

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCD 120
           K+ +VTGA+ GIG + A  LA  G  V +    SKEK E  +  I++K G ++  ++  +
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQ-AN 62
Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           ++   E+K+       +   + VLVNNAG+  +N L   +  E +  ++     T  + +
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVID-----TNLKGV 117
Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD--GMEQYARNKRVQVALTEKWS 238
              ++KA P  + +   SG +       +L    G+    G   Y   K   + LT+  +
Sbjct: 118 FNCIQKATP--QXLRQRSGAII------NLSSVVGAVGNPGQANYVATKAGVIGLTKSAA 169
Query: 239 EMYKEKGIGFYSMHPGW 255
                +GI   ++ PG+
Sbjct: 170 RELASRGITVNAVAPGF 186

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLEL-- 118
           K  ++TGA++G G  TAE LA  G  VY   R    +  + + AI     + +V L    
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAG--VLENNRLITSEGFELNFAVNVLGTYTI 176
            D+ S   +    ++   ++  + VL++NAG  V       T E F   + +NVL T  +
Sbjct: 66  LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 177 TESMVP 182
             + +P
Sbjct: 126 NRAALP 131

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   I+GK  VVT  ++G+G+A+A  LA  GA + +  R++EK E A S I S      V
Sbjct: 1   MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQV 60
Query: 115 HLELCDLSSITEIKSF 130
            +   D+    +I   
Sbjct: 61  DIVAGDIREPGDIDRL 76

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL---SAIRSKTGNENVH 115
           + G+  +VTG++ GIG A AEGLA  GA  +++    + G TA      I S    + + 
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIASGGTAQELA 88
Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
            +L +  + T++   A   +    PV +LV NA    N  L  +T        AVN+  T
Sbjct: 89  GDLSEAGAGTDLIERAEAIA----PVDILVINASAQINATLSALTPNDLAFQLAVNLGST 144
Query: 174 YTITESMVPLLEKAAPDARVITVSS 198
             + +S +P +  A    RV+++ S
Sbjct: 145 VDMLQSALPKM-VARKWGRVVSIGS 168

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVHL 116
           R E K  +VTG+  GIG A AE LA  GA V +   + E  E     I +  G   +V +
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVL 171
           ++ D  S    K+ A+R   +   +  LVNNA +    +L     I  E ++   +VN+ 
Sbjct: 66  DVSDPES---AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 172 GTYTITESMVPLLEK 186
           G    T ++   + K
Sbjct: 123 GALWCTRAVYKKMTK 137

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+EGK+ ++TG+  GIG A AE     GATV +     E+   A + I         +  
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAV 59
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
             D++    I +           + +LVNNA + +   +  IT E +E  FA+NV GT
Sbjct: 60  QXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGT 117

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ G+  +VTGA  GIG A A    ++GA V +    ++K    L  I +  G ++V + 
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK----LKEIAADLG-KDVFVF 78
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             +LS    IK  A     + + + +LVNNAG+  +   +    + ++   AVN+    T
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAST 138
Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +T  ++  + +     R+I ++S
Sbjct: 139 LTRELIHSMMRRRY-GRIINITS 160

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE----TALSAIRSKTGNENVHLELCD 120
           +VTGA++G G A A    +RG  V  +  S E  E    T   A   K     V  ++ D
Sbjct: 6   IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKV--LRVRADVAD 63
Query: 121 LSSI-TEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITS--EGFELNFAVNVLGTY 174
              +   I +   +F      + VLVNNAG+  N+    L T+  E F+   AVNV G +
Sbjct: 64  EGDVNAAIAATMEQFG----AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 175 TITESMVP--LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
               +++P  LL+ A     + +V+S                 +F G   Y  +K   + 
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIASVAS---------------LVAFPGRSAYTTSKGAVLQ 164
Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFAGNLRTSEEG-----ADT 285
           LT+  +  Y   GI   ++ PG  ETP     +  P   ++    +   E G     AD 
Sbjct: 165 LTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADA 224
Query: 286 VLWLALQPKEKLVSGSFYFDRA 307
           V++LA +    +   +   D A
Sbjct: 225 VMFLAGEDATYVNGAALVMDGA 246

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 42/264 (15%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNE-NVHL 116
           ++GK  +VTGA+ GIG A A+ LA+ GA V +     KE+ E  +  I+S  G+  ++  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 117 ELCDLSSITEIKSFANRFSLKNKP----VHVLVNNAGVLENNRL--ITSEGFELNFAVNV 170
            L  L  +  + S  +   L+N+       +L+NNAG+     +   T + F+   +VN 
Sbjct: 65  NLESLHGVEALYSSLDN-ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNA 123
Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
              + I +  +  L     ++R+I +SS                 S      Y+  K   
Sbjct: 124 KAPFFIIQQALSRLRD---NSRIINISSAATRI------------SLPDFIAYSXTKGAI 168
Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPG------------VAKSMPSFNERFAGNLRT 278
              T   ++    +GI   ++ PG+ +T               A ++ +FN      L  
Sbjct: 169 NTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNR-----LGE 223
Query: 279 SEEGADTVLWLALQPKEKLVSGSF 302
            E+ ADT  +LA  P  + V+G  
Sbjct: 224 VEDIADTAAFLA-SPDSRWVTGQL 246

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +E K  +VT +  GIG A A  LA  GA V +  R +E  +  ++ ++ +    +V   +
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTV 69
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYT 175
           C +    + +         +  V +LV+NA V     N    T E ++    VNV  T  
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +T+++VP +EK      V+ VSS G Y              F  +  Y  +K   + LT+
Sbjct: 130 MTKAVVPEMEKRG-GGSVLIVSSVGAYH------------PFPNLGPYNVSKTALLGLTK 176
Query: 236 KWSEMYKEKGIGFYSMHPGWAET 258
             +     + I    + PG  +T
Sbjct: 177 NLAVELAPRNIRVNCLAPGLIKT 199

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 18/251 (7%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHLE 117
           ++GK  ++TG++ GIG ATA   A  GA V +  R      +  ++++R+  G+      
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTY 174
               S   +     + F  K   + VL+NNAG L   +    I    ++     N+    
Sbjct: 65  DLATSEACQ--QLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
             T+  +P L  AA        +SG       T  +  ++G   G   Y   K     + 
Sbjct: 123 MTTKFALPHLAAAAK-------ASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVH 175
Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWL 289
           + W + + + G+ F  + PG  +T   A       +R +     G   T+EE A   L+ 
Sbjct: 176 KNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFF 235
Query: 290 ALQPKEKLVSG 300
           A       ++G
Sbjct: 236 ASHLASGYITG 246

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  V+TGA++GIG A A   +  G  + ++ R  E+    L A+       N+   LC  
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER----LKAL-------NLPNTLCAQ 65
Query: 122 SSITEIKSFANRFSLKNK---PVHVLVNNAGVLENNRLITSEGFELN--FAVNVLGTYTI 176
             +T+  +F    +   K   P   +VNNAG++   ++ T E  E    F VNVLG    
Sbjct: 66  VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125
Query: 177 TESMVPLLEKAAPDARVITVSS 198
            ++++  + KA     +I +SS
Sbjct: 126 MQAVLAPM-KARNCGTIINISS 146

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 26/242 (10%)
Query: 65  VVTGANAGIGYATAEGLASRGATVY------MVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++TGA  GIG A A   A R A  +      +V  S+   +    ++  +          
Sbjct: 6   LITGAGKGIGRAIALEFA-RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64
Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            D+S + +++        +   +  LVNNAGV     L  +T E F+     N+ GT+ +
Sbjct: 65  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124
Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           T+++  L+E+      +  ++S     A       F   S      Y  +K  Q  L E 
Sbjct: 125 TQALFALMERQH-SGHIFFITSVAATKA-------FRHSSI-----YCMSKFGQRGLVET 171
Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK 296
                ++  +    + PG   TP   K     ++     +   E+ A  V+   LQP   
Sbjct: 172 MRLYARKCNVRITDVQPGAVYTPMWGK----VDDEMQALMMMPEDIAAPVVQAYLQPSRT 227
Query: 297 LV 298
           +V
Sbjct: 228 VV 229

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 49  NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK 108
           +++P+  Q  +  +  +VTGA+ GIG   A   A  GATV ++ R++EK     S I  +
Sbjct: 2   HYQPK--QDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE 59
Query: 109 TGNENVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVL 151
           TG +     L  L+  +E  +  A R ++    +  +++NAG+L
Sbjct: 60  TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL 103

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS------KTGN 111
           R+ G    +TGA+ GIG A A   A  GA + +  ++ +     L  I +        G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVN 169
           + +   + D+    +I +   +   K   + +LVNNA    L N     ++  +L   VN
Sbjct: 102 KALPC-IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160
Query: 170 VLGTYTITESMVPLLEKA 187
             GTY  +++ +P L+K+
Sbjct: 161 TRGTYLASKACIPYLKKS 178

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++G+  ++TG  +G+G A  +   + GA V ++ +S E+    L+ + +  G +NV   
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----LAELETDHG-DNVLGI 56
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLIT-------SEGFELNFAVNV 170
           + D+ S+ + K  A+R   +   +  L+ NAG+ + +  +           F+  F +NV
Sbjct: 57  VGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
            G     ++ +P L  A+    + T+S+ G Y
Sbjct: 117 KGYIHAVKACLPAL-VASRGNVIFTISNAGFY 147

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVH 115
           AR  GK+ ++TG++ GIG + A   A  GA V +  R++++  ET    +++    E ++
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81
Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
             + D++  +      N    K   + +LVNNAG
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAG 115

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R+ GK  +V+G   G+G +    + + GA V       E+G+   + +        V
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA--RYV 58
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN-----FAVN 169
           HL   D++   + K+  +        +HVLVNNAG+L    + T E + L        VN
Sbjct: 59  HL---DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL---NIGTIEDYALTEWQRILDVN 112
Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           + G +    ++V  +++A     +I +SS           +E  +G+      Y   K  
Sbjct: 113 LTGVFLGIRAVVKPMKEAG-RGSIINISS-----------IEGLAGTV-ACHGYTATKFA 159
Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETP 259
              LT+  +      GI   S+HPG  +TP
Sbjct: 160 VRGLTKSTALELGPSGIRVNSIHPGLVKTP 189

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ K  ++TGA  GIG AT E  A  GA   +V    E+G   L       G   V  +
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGP--LREAAEAVGAHPVVXD 57
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN--RLITSEGFELNFAVNVLGTYT 175
           + D +S+   + FA   +   + +  +V+ AG+  +N       E +EL   VN+ G++ 
Sbjct: 58  VADPASVE--RGFAEALAHLGR-LDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFL 114
Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + ++      +  P + V+T S   +Y  +L            G   YA +    V LT 
Sbjct: 115 VAKAASEAXREKNPGSIVLTASR--VYLGNL------------GQANYAASXAGVVGLTR 160
Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
             +      GI   ++ PG+ ET   AK      E+
Sbjct: 161 TLALELGRWGIRVNTLAPGFIETRXTAKVPEKVREK 196

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS------KTGNE 112
           + GK   +TGA+ GIG A A   A  GA V +  +S          I S        G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV--LENNRLITSEGFELNFAVNV 170
            + L+ CD+    ++++           + +LVNNA    L        + F+L   VN 
Sbjct: 64  GLALK-CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNA 122
Query: 171 LGTYTITESMVPLLEKAAPDARVITVS 197
            G++   ++ +P L + AP+  ++T++
Sbjct: 123 RGSFVCAQACLPHLLQ-APNPHILTLA 148

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M + +  K  +VTGA+ GIG A AE     G+ V +     + GE               
Sbjct: 9   MFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKV-IDLSIHDPGEAKYD----------- 56
Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELN--FAVNVLG 172
           H+E CD+++  ++K+  +    +   + VLVNNAG+    ++ +    E      VN+ G
Sbjct: 57  HIE-CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFG 115
Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            Y  ++  +P + ++  D  ++ +SS
Sbjct: 116 YYYASKFAIPYMIRSR-DPSIVNISS 140

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLE 117
           + GK  +VTG+  G+G+A AEGLA+ GA V +   R+    E+  +  R       V  +
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           + D  +   I++  ++   +   V +L+NNAG+
Sbjct: 67  VTDELA---IEAAFSKLDAEGIHVDILINNAGI 96

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           G+  +VTG++ G+G A AEGLA  GA +  +    +    A +    +    +      D
Sbjct: 26  GRTALVTGSSRGLGRAMAEGLAVAGARI--LINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           ++S +EI     R   +   V +LVNNAG+
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGI 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-56
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	9e-56
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-49
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-34
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-32
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-29
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	8e-29
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-28
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-28
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	5e-28
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-27
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-26
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-25
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-25
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-25
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	9e-25
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-24
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-23
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-23
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-23
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-23
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-23
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-23
1spx_A	278	Short-chain reductase family member (5L265); paral	6e-23
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-22
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-22
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-22
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-22
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-22
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-22
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-22
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-22
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-22
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-22
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	7e-22
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-22
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-21
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-21
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-21
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-21
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-21
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-21
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-21
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-21
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-21
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-21
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-21
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-21
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-21
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-20
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-20
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-20
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-20
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-20
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-20
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-20
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-20
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-20
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-20
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-20
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-20
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-20
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-20
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	9e-20
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-19
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-19
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-19
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-19
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-19
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-19
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-19
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-19
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-19
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	7e-19
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	8e-19
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	9e-19
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-18
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-18
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-18
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-18
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-18
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-18
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-18
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-18
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-18
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-18
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-18
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-18
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-18
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-18
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-18
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-18
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-18
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-18
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	5e-18
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-18
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-18
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-18
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	8e-18
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	8e-18
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-17
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-17
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-17
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-17
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-17
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-17
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-17
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-17
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-17
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-17
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-17
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-17
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-17
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	6e-17
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-17
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	8e-17
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-16
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-16
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-16
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-16
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-16
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-16
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-16
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-16
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-16
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	6e-16
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-16
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-15
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-15
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-15
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-15
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-15
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-15
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	4e-15
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	6e-15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	8e-15
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-14
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-14
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-14
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-14
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-14
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-14
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	4e-14
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-14
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-14
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-14
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	7e-14
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-14
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	9e-14
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	9e-14
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-13
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-13
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-13
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-13
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-13
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	8e-13
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-12
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-12
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-12
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-12
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-12
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-12
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-12
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-12
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-11
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-11
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-08
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	4e-11
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-10
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  184 bits (469), Expect = 1e-56
 Identities = 63/289 (21%), Positives = 102/289 (35%), Gaps = 56/289 (19%)

Query: 61  GKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
               +VTG N GIG A    L       V +  R   +G+ A+  ++++  +        
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS--PRFHQL 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTIT 177
           D+  +  I++  +    +   + VLVNNAG+       T      E+    N  GT  + 
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC 121

Query: 178 ESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQ------------- 222
             ++PL+    P  RV+ VSS          + +L+    S    E+             
Sbjct: 122 TELLPLI---KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178

Query: 223 --------------YARNKRVQVALT----EKWSEMYKEKGIGFYSMHPGWAETPGVAKS 264
                         Y   K     L+     K SE  K   I   +  PGW  T      
Sbjct: 179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT------ 232

Query: 265 MPSFNERFAGN--LRTSEEGADTVLWLALQPKE-KLVSGSFYFDRAEAP 310
                   AG    ++ EEGA+T ++LAL P + +   G F  ++    
Sbjct: 233 ------DMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 275

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  182 bits (464), Expect = 9e-56
 Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 26/263 (9%)

Query: 49  NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK 108
            +   D+      +  V+TGAN+G+G  TA  LA RGATV M  R   KGE A   +  +
Sbjct: 5   GWTAADL-PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ 63

Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAV 168
                V +   DL  ++ ++ FA+          VL+NNAG++     +T +GFE     
Sbjct: 64  -----VEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAVPYALTVDGFESQIGT 114

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT-DDLEFNSGSFDGMEQYARNK 227
           N LG + +T  ++P L       RV+TVSS   +   +  +DL + S  +     Y+++K
Sbjct: 115 NHLGHFALTNLLLPRLT-----DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK 169

Query: 228 RVQVALTEKWSEMYKEKGIGF--YSMHPGWAETPGVAKSMPSFNERFAGNL-----RTSE 280
              +  T +        G      + HPG++ T     S     +             ++
Sbjct: 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDAD 229

Query: 281 EGADTVLWLALQPKEKLVSGSFY 303
            GA   L+ A Q    L   SF 
Sbjct: 230 FGARQTLYAASQD---LPGDSFV 249

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  166 bits (422), Expect = 2e-49
 Identities = 65/319 (20%), Positives = 110/319 (34%), Gaps = 79/319 (24%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
               + +  VVTG N GIG+   + L+S G  V + CR   KG  A+  ++  + +ENV 
Sbjct: 7   NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLK-NSNHENVV 65

Query: 116 LELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGV------------------------ 150
               D++     + S A+        + +LVNNAGV                        
Sbjct: 66  FHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEL 125

Query: 151 --------LENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
                    +     T E  E    +N  G  ++TE ++PLL+  +   R++ VSS    
Sbjct: 126 VKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL-SDSPRIVNVSSSTGS 184

Query: 203 TAHLTDD---------------------LEFNSGSFDGMEQ----------YARNKRVQV 231
             +++++                             + + +          Y  +K    
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL 291
           A T   +            + PG  +T      M            T+EEGA+ V+ +AL
Sbjct: 245 AYTRVLANKI--PKFQVNCVCPGLVKT-----EMNYGI-----GNYTAEEGAEHVVRIAL 292

Query: 292 QPKEKLVSGSFYFDRAEAP 310
            P +   SG FY     + 
Sbjct: 293 FP-DDGPSGFFYDCSELSA 310

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  125 bits (317), Expect = 1e-34
 Identities = 55/266 (20%), Positives = 94/266 (35%), Gaps = 52/266 (19%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGAT--VYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
            + VVTGAN GIG    + L        +    R  EK    L +I     +  VH+   
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSI----KDSRVHVLPL 58

Query: 120 DLSSITEIKSFANRFS--LKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTY 174
            ++    + +F ++    + +  + +L+NNAGVL +                 VN     
Sbjct: 59  TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 175 TITESMVPLLEKAA----------PDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY- 223
            +T+ ++PLL+ AA            A VIT+SSG      +TD    N+          
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL---GSITD----NTSGSAQFPVLA 171

Query: 224 ------ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR 277
                 A N           +   K+  +   +  PGW +T     ++   N        
Sbjct: 172 YRMSKAAIN-----MFGRTLAVDLKDDNVLVVNFCPGWVQT-----NLGGKN-----AAL 216

Query: 278 TSEEGADTVLWLALQPKEKLVSGSFY 303
           T E+    ++    +      +G F+
Sbjct: 217 TVEQSTAELISSFNKLDNS-HNGRFF 241

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  120 bits (304), Expect = 2e-32
 Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 32/263 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLAS---RGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
            + ++TG N G+G    + L +       ++  CR++E+ +  L  +     + N+H+  
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKN--HSNIHILE 78

Query: 119 CDLSSITEIKSFANRFS--LKNKPVHVLVNNAGVL-ENNRL--ITSEGFELNFAVNVLGT 173
            DL +               K++ ++VL NNAG+  ++ R+  + S+        N +  
Sbjct: 79  IDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 138

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD-----GMEQYARNKR 228
             + ++ +PLL+KAA       +  G     +++  L    GS       GM  Y  +K 
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL----GSIQGNTDGGMYAYRTSKS 194

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLW 288
              A T+  S     + I   S+HPGW +T      M   +                ++ 
Sbjct: 195 ALNAATKSLSVDLYPQRIMCVSLHPGWVKT-----DMGGSS-----APLDVPTSTGQIVQ 244

Query: 289 LALQPKEKLVSGSFY-FDRAEAP 310
              +  EK  +G F  +D     
Sbjct: 245 TISKLGEK-QNGGFVNYDGTPLA 266

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  113 bits (284), Expect = 2e-29
 Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 34/258 (13%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++N   + M  R+  K  V+TGA +GIG A A+   + GA V++  R K+  + A++ I 
Sbjct: 15  TENLYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI- 73

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFEL 164
                        D +++ E+     +   +   + VL  NAG      L  +T E ++ 
Sbjct: 74  ----GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDD 129

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
            F  NV G     +  +PLL +    + V+   S    T                   YA
Sbjct: 130 TFDRNVKGVLFTVQKALPLLARG---SSVVLTGSTAGSTG------------TPAFSVYA 174

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------- 277
            +K    +    W    K++GI   ++ PG  ET G+ +       +  G L        
Sbjct: 175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP 234

Query: 278 -----TSEEGADTVLWLA 290
                 +EE A   L+LA
Sbjct: 235 MGRVGRAEEVAAAALFLA 252

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  112 bits (282), Expect = 2e-29
 Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 23/246 (9%)

Query: 49  NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK 108
           +++P   Q  +  +  +VTGA+ GIG   A   A  GATV ++ R++EK     S I  +
Sbjct: 2   HYQP--KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 59

Query: 109 TGNENVHLEL-CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFEL 164
           TG +     L     +    +  A R ++    +  +++NAG+L +   +     + ++ 
Sbjct: 60  TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQD 119

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
              VNV  T+ +T++++PLL K +    ++  SS                        YA
Sbjct: 120 VMQVNVNATFMLTQALLPLLLK-SDAGSLVFTSSSVGRQG------------RANWGAYA 166

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGAD 284
            +K     + +  ++ Y ++ +    ++PG   T   A + P+ +      L+T  +   
Sbjct: 167 ASKFATEGMMQVLADEY-QQRLRVNCINPGGTRTAMRASAFPTED---PQKLKTPADIMP 222

Query: 285 TVLWLA 290
             LWL 
Sbjct: 223 LYLWLM 228

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  110 bits (278), Expect = 8e-29
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 21/238 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++G+  +VTGA  GIG A A   A+ GA+V ++ R++         I+S    + + + 
Sbjct: 11  LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70

Query: 118 L-CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGT 173
           L  + ++  + +  A R   +   +  L++NA ++     +     E F     VNV  T
Sbjct: 71  LNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + +T +++PLL++ + DA +   SS                        Y  +K     L
Sbjct: 131 FMLTRALLPLLKR-SEDASIAFTSSSVGRKG------------RANWGAYGVSKFATEGL 177

Query: 234 TEKWS-EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
            +  + E+     +   S++PG   T   A++ P  N     N    E+     L+L 
Sbjct: 178 MQTLADELEGVTAVRANSINPGATRTGMRAQAYPDEN---PLNNPAPEDIMPVYLYLM 232

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  109 bits (276), Expect = 2e-28
 Identities = 50/255 (19%), Positives = 96/255 (37%), Gaps = 33/255 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   I GK  V+TG+++GIG A AEG A  GA + +V R  ++   A  +++ K G   +
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVL 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
            +   D+++   + +             +LVNNAG   N  +     E ++  + + V+ 
Sbjct: 61  EVA-VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMA 119

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
              +   +VP + +A     +I  +S                        Y   K   + 
Sbjct: 120 AVRLARGLVPGM-RARGGGAIIHNASICAVQP------------LWYEPIYNVTKAALMM 166

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--------------- 277
            ++  +    +  I    ++PG   TP   K+     +   G+ +               
Sbjct: 167 FSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR 226

Query: 278 --TSEEGADTVLWLA 290
             + EE A+  ++L 
Sbjct: 227 FASPEELANFFVFLC 241

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  109 bits (274), Expect = 4e-28
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 43/260 (16%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  +++GK  +VTG+ AGIG A A  L + GA V +  R +E     +  IR++  +  +
Sbjct: 4   MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL 63

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
              + DL +    +    ++      V +L+NN G+ E      I  E +   F VN++ 
Sbjct: 64  QPVVADLGTEQGCQDVIEKYP----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMS 119

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF--DGMEQYARNKRVQ 230
              +T S +  + +   + RVI ++S               +       M  Y+  K +Q
Sbjct: 120 GVRLTRSYLKKMIERK-EGRVIFIASE--------------AAIMPSQEMAHYSATKTMQ 164

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK-----------SMPSFNERFAGNLR-- 277
           ++L+   +E+     +   ++ PG   T GV             ++    +RF    R  
Sbjct: 165 LSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT 224

Query: 278 -------TSEEGADTVLWLA 290
                    EE A  V +L+
Sbjct: 225 SIIQRLIRPEEIAHLVTFLS 244

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  108 bits (273), Expect = 5e-28
 Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 33/249 (13%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           +    +GK  +V G   G+G AT   L   GA V +  R++                  V
Sbjct: 2   VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRV 56

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
           H    D++ + EI             + +L  NAGV E      ++   ++  FAVN  G
Sbjct: 57  HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKG 116

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +   + + PL+ +      ++  SS                    GM  Y+ +K   V+
Sbjct: 117 AFFTVQRLTPLIREG---GSIVFTSSVADEGG------------HPGMSVYSASKAALVS 161

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNERFA-----GNLRTSEE 281
                +     +GI   S+ PG+ +TP    +  +      F              T++E
Sbjct: 162 FASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADE 221

Query: 282 GADTVLWLA 290
            A  VL+LA
Sbjct: 222 VARAVLFLA 230

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  107 bits (270), Expect = 1e-27
 Identities = 44/247 (17%), Positives = 75/247 (30%), Gaps = 23/247 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M          V GA   IG   A+  A+ G TV+   R+ EK    ++ I +  G   +
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RI 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
                D  +  E+ +F N     + P+ V + N G   N  +   T   F   + +    
Sbjct: 59  VARSLDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWA 117

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +        L+          T ++  +                 G   +A  K    A
Sbjct: 118 GFVSGRESARLMLAHGQGKIFFTGATASLR-------------GGSGFAAFASAKFGLRA 164

Query: 233 LTEKWSEMYKEKGIG-FYSMHPGWAETPGVAKSMPSFNERFA----GNLRTSEEGADTVL 287
           + +  +     K I   + +     +T  V +       + A      L      A    
Sbjct: 165 VAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYW 224

Query: 288 WLALQPK 294
            L  QPK
Sbjct: 225 QLYQQPK 231

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  103 bits (258), Expect = 7e-26
 Identities = 47/273 (17%), Positives = 88/273 (32%), Gaps = 41/273 (15%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLA---SRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
            +    CV+TGA+ G G A A  LA   S G+ + +  RS+         + ++  +  V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 115 HLELCDLSSITEIKSFAN----RFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELN 165
            L   DL +   ++   +        +     +L+NNA  L +                 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 166 FAVNVLGTYTITESMVPLLEKA-APDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
           +A+N+     +T   +   + +      V+ +SS                  + G   Y 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP------------YKGWGLYC 170

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP-----GVAKSMPSFNERFA-----G 274
             K  +  L +  +   +E  +   S  PG  +             P    +       G
Sbjct: 171 AGKAARDMLYQVLAA--EEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG 228

Query: 275 NLRTSEEGADTVLWLALQPKEKLVSGSF--YFD 305
            L      A  +L L  +      SG+   ++D
Sbjct: 229 ALVDCGTSAQKLLGLLQKDTF--QSGAHVDFYD 259

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  101 bits (254), Expect = 3e-25
 Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 30/262 (11%)

Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           +   P+  +  + G+  ++TGA  GIG  TA   A   + + +   +K   E   +  + 
Sbjct: 19  QGHMPKRRK-SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG 77

Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELN 165
                 VH  + D S+  +I S A +   +   V +LVNNAGV+  + L        E  
Sbjct: 78  LGA--KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT 135

Query: 166 FAVNVLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQY 223
           F VNVL  +  T++ +P +        ++TV+S  G +    L                Y
Sbjct: 136 FEVNVLAHFWTTKAFLPAM-TKNNHGHIVTVASAAGHVSVPFLLA--------------Y 180

Query: 224 ARNKRVQVALTEKWSE---MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSE 280
             +K   V   +  ++     +  G+    + P +  T  +     S      G     E
Sbjct: 181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL-----GPTLEPE 235

Query: 281 EGADTVLWLALQPKEKLVSGSF 302
           E  + ++   L  ++ +   S 
Sbjct: 236 EVVNRLMHGILTEQKMIFIPSS 257

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  101 bits (254), Expect = 4e-25
 Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 16/241 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
             +G+  VVTG  +GIG ATA   A RGA + +    +   E A++ +R +    + H  
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGV 85

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           +CD+  + E+   A+        V V+ +NAG++    L  +  + +     +++ G+  
Sbjct: 86  VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 145

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
             E+ +P L +      +   +S                    G+  Y   K   V L E
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVP------------NAGLGTYGVAKYGVVGLAE 193

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE 295
             +   K  GIG   + P   ET  V+ S       +  +                   +
Sbjct: 194 TLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD 253

Query: 296 K 296
            
Sbjct: 254 D 254

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  100 bits (251), Expect = 6e-25
 Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 20/243 (8%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-EN 113
           M    +    ++TGA+ GIG   A GLA+ G  V ++ RSK+  E     I     + + 
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS-EGFELNFAVNVLG 172
             +   D++  T+  +       K   V +LVN A +  +  L    + F     +NV+ 
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIA 120

Query: 173 TYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            Y I +++  ++ K   +  +  V+S    Y              F     Y   K   +
Sbjct: 121 QYGILKTVTEIM-KVQKNGYIFNVASRAAKYG-------------FADGGIYGSTKFALL 166

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL 291
            L E         GI   ++ PGW  T    K+   F +         ++  +T+  L  
Sbjct: 167 GLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMI---QPDDLLNTIRCLLN 223

Query: 292 QPK 294
             +
Sbjct: 224 LSE 226

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  101 bits (253), Expect = 9e-25
 Identities = 44/249 (17%), Positives = 85/249 (34%), Gaps = 23/249 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           ++    G+   VTG   G+G      L ++G  V +    ++  + AL+ + ++     V
Sbjct: 3   LK-DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
                D++S    K  A+    +  PV +L NNAGV     +   + + ++    VN+ G
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHG 121

Query: 173 TYTITESMVPLLEKAAPDA-----RVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
                 + VP + +           V+  +S   + A                  Y   K
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA------------AGSPGIYNTTK 169

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETP---GVAKSMPSFNERFAGNLRTSEEGAD 284
                L+E       +  IG   + PG  ++           +         +T+ E   
Sbjct: 170 FAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA 229

Query: 285 TVLWLALQP 293
            V    ++P
Sbjct: 230 GVHEFGMEP 238

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 98.0 bits (245), Expect = 3e-24
 Identities = 40/242 (16%), Positives = 76/242 (31%), Gaps = 25/242 (10%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
             + +VTGA +G+G A   GL  RG  V M+ R  +     L       GN  + +   D
Sbjct: 3   LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQ----RLQQQELLLGNAVIGIV-AD 57

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           L+   ++               ++++ AG  E   +   T+E        N++ T  + +
Sbjct: 58  LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
             V L+ +      +  V S                        Y  +K       E   
Sbjct: 118 QTVRLIGERG--GVLANVLSSAAQVG------------KANESLYCASKWGMRGFLESLR 163

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLV 298
              K+  +   +++P    +     +    +        T E+ A  +L          V
Sbjct: 164 AELKDSPLRLVNLYPSGIRSEFWDNT----DHVDPSGFMTPEDAAAYMLDALEARSSCHV 219

Query: 299 SG 300
           + 
Sbjct: 220 TD 221

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 97.2 bits (243), Expect = 6e-24
 Identities = 55/241 (22%), Positives = 87/241 (36%), Gaps = 32/241 (13%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           E K  V+TGA+ GIG A A  LA  G  + +  RS ++ E     +  + G E V     
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-VFYHHL 59

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+S    ++ F+ +   +   V V+V NAG+    RL  ++ E F     VN+LG +   
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           ++ +  L K      ++T S                         Y   K    AL    
Sbjct: 120 KAFLDSL-KRTGGLALVTTSDVSARL-------------IPYGGGYVSTKWAARALVRT- 164

Query: 238 SEMYKE-KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR----TSEEGADTVLWLALQ 292
                E   + F+ + PG  +T            +            +E A+ V  L   
Sbjct: 165 --FQIENPDVRFFELRPGAVDTYF-------GGSKPGKPKEKGYLKPDEIAEAVRCLLKL 215

Query: 293 P 293
           P
Sbjct: 216 P 216

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 12/165 (7%)

Query: 43  FKEHSKNFKPEDMQA----RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG 98
              HS    P          + G+  +VTG + GIG   A+GL   GA V++  R  E  
Sbjct: 7   HHHHSSGLVPRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEAC 66

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI- 157
               + +    G  +      DLSS    +  A      +  + +LVNNAG      L  
Sbjct: 67  ADTATRLS-AYG--DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES 123

Query: 158 -TSEGFELNFAVNVLGTYTITESMVPLLEKAAPD---ARVITVSS 198
               G+E    +NV   ++  + ++PLL ++A     ARVI + S
Sbjct: 124 YPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 98.7 bits (246), Expect = 1e-23
 Identities = 55/277 (19%), Positives = 97/277 (35%), Gaps = 27/277 (9%)

Query: 38  FTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK 97
            +  G ++  +         R+ G    +TGA+ GIG A A   A  GA + +  ++ + 
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81

Query: 98  G-------ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
                    TA   I +  G       + D+    +I +   +   K   + +LVNNA  
Sbjct: 82  HPKLLGTIYTAAEEIEAVGG--KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASA 139

Query: 151 LENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD 208
           +         ++  +L   VN  GTY  +++ +P L K +  A ++ +S           
Sbjct: 140 ISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYL-KKSKVAHILNISPP--------- 189

Query: 209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
            L  N   F     Y   K          +E +K   I   ++ P  A        +   
Sbjct: 190 -LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLG-- 245

Query: 269 NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFD 305
                   R  +  AD    +  +PK    +G+F  D
Sbjct: 246 GPGIESQCRKVDIIADAAYSIFQKPKS--FTGNFVID 280

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 96.6 bits (241), Expect = 1e-23
 Identities = 33/252 (13%), Positives = 74/252 (29%), Gaps = 34/252 (13%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M A  E +  +V G    +G    +   +R   V  +   + +  +A   ++        
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK-------- 52

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVL 171
            +         ++ +   +  L ++ V  ++  AG             +  +L +  ++ 
Sbjct: 53  -MTDSFTEQADQVTAEVGK-LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIW 110

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            +   +      L++      +    +                    GM  Y   K    
Sbjct: 111 TSTISSHLATKHLKEG---GLLTLAGAKAALDG------------TPGMIGYGMAKGAVH 155

Query: 232 ALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWL 289
            L +  +        G    ++ P   +TP   KSMP  +     +    E   +T    
Sbjct: 156 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD---FSSWTPLEFLVETFHDW 212

Query: 290 ALQPKEKLVSGS 301
                ++  SGS
Sbjct: 213 I-TGNKRPNSGS 223

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 95.8 bits (239), Expect = 3e-23
 Identities = 51/245 (20%), Positives = 89/245 (36%), Gaps = 33/245 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +  KN +   A  GIG  T+  L  R    +++    E    AL+ +++     N+   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFH 60

Query: 118 LCDLS-SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTI 176
             D++  + E K    +   + K V +L+N AG+L           E   A+N  G    
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNT 114

Query: 177 TESMVPLLEK--AAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           T +++   +K    P   +  + S  G                    +  Y+ +K   V+
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFNAIH--------------QVPVYSASKAAVVS 160

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFAGNLR-----TSEEGADT 285
            T   +++    G+  YS++PG   TP V    S      R A  L      TSE+    
Sbjct: 161 FTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQN 220

Query: 286 VLWLA 290
            +   
Sbjct: 221 FVKAI 225

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 96.2 bits (240), Expect = 3e-23
 Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)

Query: 39  TKNGFKEHSKNFKPEDMQA--------RIEGKNCVVTGANAGIGYATAEGLASRGATVYM 90
           + +    HS   +    Q         R   +  +VTGA+ GIG A A  L  +G  V  
Sbjct: 2   SSHHHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVG 61

Query: 91  VCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
             R+    E   +  +S      +    CDLS+  +I S  +    ++  V + +NNAG+
Sbjct: 62  CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL 121

Query: 151 LENNRLIT--SEGFELNFAVNVLGTYTITESMVP-LLEKAAPDARVITVSS--------- 198
              + L++  + G++  F VNVL     T      + E+   D  +I ++S         
Sbjct: 122 ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL 181

Query: 199 --GGMYTA 204
                Y+A
Sbjct: 182 SVTHFYSA 189

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 95.4 bits (238), Expect = 4e-23
 Identities = 33/240 (13%), Positives = 59/240 (24%), Gaps = 36/240 (15%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
           +     KN +V G +  +G    +   S+      +   +        +           
Sbjct: 17  RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--SFT--------- 65

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLG 172
                 S   EIKS   + + K+  V   V  AG             +  +    +N+  
Sbjct: 66  ---IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYS 122

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +        LL +       +   +                    GM  Y   K     
Sbjct: 123 AFASAHIGAKLLNQG---GLFVLTGASAALNR------------TSGMIAYGATKAATHH 167

Query: 233 LTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
           + +  +        G     + P   +TP   K M   +  F      SE       W  
Sbjct: 168 IIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS--DANFDDWTPLSEVAEKLFEWST 225

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 95.3 bits (238), Expect = 6e-23
 Identities = 51/257 (19%), Positives = 90/257 (35%), Gaps = 38/257 (14%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVH 115
            R   K  ++TG++ GIG ATA   A  GA V +  R  E+ E     I +     +NV+
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL------ITSEGFELNFAVN 169
             + D+++        +    K   + +LVNNAG    +         + E ++    +N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           +     +T+  VP L        ++ +SS   G+              +      Y+  K
Sbjct: 122 LRSVIALTKKAVPHLSSTK--GEIVNISSIASGL-------------HATPDFPYYSIAK 166

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS------FNERFAGNLR---- 277
                 T   +    + GI   S+ PG   T   +           F    A        
Sbjct: 167 AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA 226

Query: 278 ----TSEEGADTVLWLA 290
                 ++ A+ + +LA
Sbjct: 227 GVMGQPQDIAEVIAFLA 243

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 94.6 bits (236), Expect = 1e-22
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++N   + M ++   K  +VTGA +G+G A A  LA  G  V +  R  +  +   + I 
Sbjct: 15  TENLYFQSM-SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI- 72

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFE 163
              G++ + +   D++    +++       K   V VL NNAG       +   T   ++
Sbjct: 73  ---GDDALCVP-TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWK 128

Query: 164 LNFAVNVLGTYTITESMVPLLEKAAPDA-RVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ 222
                N+ G +  T+    +++   P   R+I   S    +                   
Sbjct: 129 QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP------------RPYSAP 176

Query: 223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP---GVAKSMPSFNERFA-GNLRT 278
           Y   K     LT+  S   +   I    +  G A+TP    +   +P  +       +  
Sbjct: 177 YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMD 236

Query: 279 SEEGADTVLWLALQPKEKLVSG 300
               A  V+++A  P +  V  
Sbjct: 237 VAHVASAVVYMASLPLDANVQF 258

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 94.1 bits (235), Expect = 1e-22
 Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   I+GK  VVT  ++G+G+A+A  LA  GA + +  R++EK E A S I S      V
Sbjct: 1   MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQV 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
            +   D+    +I     +         +LV + G     R   +  E ++ ++ +    
Sbjct: 61  DIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARS 119

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGG 200
              +       + +     R++ + S  
Sbjct: 120 AVWVGRRAAEQMVEKG-WGRMVYIGSVT 146

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 94.7 bits (236), Expect = 2e-22
 Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 26/257 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS------KTGN 111
            + GK   ++G + GIG A A+ +A+ GA V +V +S E        I +      + G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVN 169
           + + +   D+     + +   +   +   + + VNNA  +    +  +  + F+L   + 
Sbjct: 66  QALPIV-GDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           V GTY +++S +P + K   +  ++T+S                   +     Y   K  
Sbjct: 125 VRGTYAVSQSCIPHM-KGRDNPHILTLSPPIRL-----------EPKWLRPTPYMMAKYG 172

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADTVLW 288
                   +E  ++ GI   ++ P     T  V   +    +      R  E  AD    
Sbjct: 173 MTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG--DEAMARSRKPEVYADAAYV 230

Query: 289 LALQPKEKLVSGSFYFD 305
           +  +P     +G+    
Sbjct: 231 VLNKPSS--YTGNTLLC 245

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 93.3 bits (233), Expect = 2e-22
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 12/146 (8%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  + G+  +VTGA  GIG  T + L + GA V  V R++   ++ +           +
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------I 54

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
                DL      +           PV +LVNNA V        +T E F+ +F VN+  
Sbjct: 55  EPVCVDLGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
              +++ +   L        ++ VSS
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSS 136

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 93.3 bits (233), Expect = 2e-22
 Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 40/248 (16%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++T A  GIG A A   A  GA V     ++ K +        +T        
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT-------R 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           + D++   +I  FAN      + + VL N AG + +  +     + ++ +  +NV   Y 
Sbjct: 56  VLDVTKKKQIDQFANEV----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 176 ITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + ++ +P +        +I +SS    +                     Y+  K   + L
Sbjct: 112 MIKAFLPKMLAQK-SGNIINMSSVASSV-------------KGVVNRCVYSTTKAAVIGL 157

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN------ERFA-----GNLRTSEEG 282
           T+  +  + ++GI    + PG  +TP + + + +          F      G   T+EE 
Sbjct: 158 TKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEI 217

Query: 283 ADTVLWLA 290
           A   ++LA
Sbjct: 218 AMLCVYLA 225

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 93.1 bits (232), Expect = 2e-22
 Identities = 32/249 (12%), Positives = 65/249 (26%), Gaps = 37/249 (14%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
                +V G    +G A  E     G TV  +  S      +   +              
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD------------G 49

Query: 120 DLSSITEIKSFANR--FSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTY 174
           + +   + +S   +   SL+   V  +   AG             +  +L    +V  + 
Sbjct: 50  NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSA 109

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              +     L+       +    +                     M  Y   K     LT
Sbjct: 110 IAAKLATTHLKPG---GLLQLTGAAAAMGP------------TPSMIGYGMAKAAVHHLT 154

Query: 235 EKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ 292
              +             ++ P   +TP   K MP+ +     +       ++ +L    +
Sbjct: 155 SSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD---HSSWTPLSFISEHLLKWTTE 211

Query: 293 PKEKLVSGS 301
              +  SG+
Sbjct: 212 TSSRPSSGA 220

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 92.5 bits (231), Expect = 3e-22
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 12/146 (8%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+    G   +VTGA  GIG  T + L + GA V  V R+     +             +
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------I 54

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
                DL      +           PV +LVNNA ++       +T E F+ +F+VN+  
Sbjct: 55  EPVCVDLGDWDATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRS 110

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            + +++ +   +        ++ VSS
Sbjct: 111 VFQVSQMVARDMINRGVPGSIVNVSS 136

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 93.0 bits (232), Expect = 3e-22
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 3/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TGA  GIG   A   A+ GA + +  R   + + A  A+  + G + VH  
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD-VHTV 75

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             DL+        A R +     + VLVNNAG+     +     + F+   AVN+     
Sbjct: 76  AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +  ++   +  A     +ITV+S
Sbjct: 136 LASAVGKAMVAAGEGGAIITVAS 158

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 92.6 bits (231), Expect = 4e-22
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 35/258 (13%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M   +  K  V++G    +G   A   A +GA + +  R+ E+ E     +      
Sbjct: 2   PGSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR- 60

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAV 168
                   D++   ++    +        V V++NNA  + + +     T E       +
Sbjct: 61  -RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
            V G   + +   P LE++     V+ V+S  +  +                  Y   K 
Sbjct: 120 TVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHS------------QAKYGAYKMAKS 165

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA--------------- 273
             +A+++  +    EKGI   S+ PG+     +         ++                
Sbjct: 166 ALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD 225

Query: 274 -GNLRTSEEGADTVLWLA 290
              L T +E A  +L++A
Sbjct: 226 LKRLPTEDEVASAILFMA 243

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 93.1 bits (232), Expect = 5e-22
 Identities = 53/254 (20%), Positives = 94/254 (37%), Gaps = 23/254 (9%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
           +   EG+  +VTG   G+G   A+ L++ G +V +  R  +  + A   I  +TGN    
Sbjct: 28  KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRA 87

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLG 172
           +  CD+    ++ +       +   + +LVNNAG       +   T E +    A N+ G
Sbjct: 88  VV-CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146

Query: 173 TYTITESMVPLLEKAAPDA-RVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            +  T+    +++   P   R+I   S    T                   Y   K    
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP------------RPNSAPYTATKHAIT 194

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR-----TSEEGADTV 286
            LT+  +   +   I    +  G A T   A+ M +   +  G +        E  A+ V
Sbjct: 195 GLTKSTALDGRMHDIACGQIDIGNAATDMTAR-MSTGVLQANGEVAAEPTIPIEHIAEAV 253

Query: 287 LWLALQPKEKLVSG 300
           +++A  P    V  
Sbjct: 254 VYMASLPLSANVLT 267

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 92.7 bits (231), Expect = 6e-22
 Identities = 49/258 (18%), Positives = 89/258 (34%), Gaps = 28/258 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG-------ETALSAIRSKTG 110
            + GK   +TGA+ GIG A A   A  GA V +  +S            +A +A+ +  G
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 111 NENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAV 168
                   CD+    ++++           + +LVNNA  +          + F+L   V
Sbjct: 63  --QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
           N  G++   ++ +P L   AP+  ++T++               N   +     Y   K 
Sbjct: 121 NARGSFVCAQACLPHL-LQAPNPHILTLAPP----------PSLNPAWWGAHTGYTLAKM 169

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADTVL 287
               +T   +  +  +G+   ++ P     T  +               R  E  AD   
Sbjct: 170 GMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAAC----RRPEIMADAAH 225

Query: 288 WLALQPKEKLVSGSFYFD 305
            +  +       G F  D
Sbjct: 226 AVLTREAAG-FHGQFLID 242

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 92.2 bits (230), Expect = 7e-22
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++G   +VTG + GIGYA  E LA  GA VY   R++++ +  L   R K    NV   
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGS 75

Query: 118 LCDLSSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTY 174
           +CDL S TE        +   +  +++LVNNAGV+ +      T + + +    N    Y
Sbjct: 76  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 135

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            +++   PLL KA+ +  VI +SS
Sbjct: 136 HLSQIAYPLL-KASQNGNVIFLSS 158

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 92.7 bits (231), Expect = 8e-22
 Identities = 55/268 (20%), Positives = 92/268 (34%), Gaps = 39/268 (14%)

Query: 46  HSKNFKPE--DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS 103
           HS    P    M AR  GK+ ++TG++ GIG + A   A  GA V +  R++++ E    
Sbjct: 10  HSSGLVPRGSHM-ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQ 68

Query: 104 AIRSKTGNENVHLEL-CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL----IT 158
            I            +  D++  +      N    K   + +LVNNAG    +        
Sbjct: 69  QILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQP 128

Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGS 216
            E ++  F +N      +T+     L K      ++ VSS   G               +
Sbjct: 129 VELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQ-------------A 173

Query: 217 FDGMEQYARNKRVQVALTEKWSEMYKEKGI-------GFYS--MHPGWAETPGVAKSMPS 267
             G   YA  K      T   +    + G+       G  +             +  + S
Sbjct: 174 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS 233

Query: 268 FNERFA-----GNLRTSEEGADTVLWLA 290
           F          G+    EE A+ +++LA
Sbjct: 234 FIGSRKECIPVGHCGKPEEIANIIVFLA 261

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 34/249 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +EGK  ++TGA +G G   A+  A  GA V +V R K   E     I    G+  + + 
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVA 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
             D+S   ++ +       K   V +LVNNAG+    +       E F+    VNV G Y
Sbjct: 62  -ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVY 120

Query: 175 TITESMVPLLEKA---APDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
            +T  ++P  ++      +  ++ V+S G                    +  Y   K   
Sbjct: 121 LMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP-------------NLAWYNATKGWV 167

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFNERFA-----GNLRTSEE 281
           V++T+  +       I   +++P   ETP +   M        ++F      G L   ++
Sbjct: 168 VSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDD 227

Query: 282 GADTVLWLA 290
            A+   +L 
Sbjct: 228 LAEAAAFLC 236

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 91.5 bits (228), Expect = 1e-21
 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 3/146 (2%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
               +     VVTG ++GIG AT E L   GA V    R  E+   A SA+R +     +
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
              +CD+    ++++FA           +LVNNAG    +     T E +     +    
Sbjct: 62  FASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFS 121

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
                 + +P LE  A DA ++ V+S
Sbjct: 122 VIHPVRAFLPQLESRA-DAAIVCVNS 146

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 35/247 (14%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           + K  ++TG ++G+G   A   A  GA V +  R+KEK E A   I    G   +     
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQM 62

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+ +  +I+    +   K   + +L+NNA          ++  G+     + + GT+  +
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 178 ESMVPLLEKAAPDARVITVSS-----GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           +++     +      +I + +      G    H                  A  K   +A
Sbjct: 123 QAIGKYWIEKGIKGNIINMVATYAWDAGPGVIH-----------------SAAAKAGVLA 165

Query: 233 LTEKWS-EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--------TSEEGA 283
           +T+  + E  ++ GI   ++ PG  E  G A  +    E     ++        T EE A
Sbjct: 166 MTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIA 225

Query: 284 DTVLWLA 290
               +L 
Sbjct: 226 GLAYYLC 232

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +EG   +VTG + GIGY   E LAS GA+VY   R++++    L+  RSK     V   
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEAS 63

Query: 118 LCDLSSITEIKSFANRFSLKNK-PVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTY 174
           +CDLSS +E +   N  +      +++LVNNAG++        T E + L  ++N    Y
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            ++    P L KA+    V+ +SS
Sbjct: 124 HLSVLAHPFL-KASERGNVVFISS 146

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 37/259 (14%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
                 R   +  ++TG  +G+G ATA  LA+ GA + +V  S E  E + +A+     +
Sbjct: 4   TSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD 63

Query: 112 ENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFEL 164
             V   + D+S   +++++      RF      +    NNAG+          T+  F+ 
Sbjct: 64  AEVLTTVADVSDEAQVEAYVTATTERF----GRIDGFFNNAGIEGKQNPTESFTAAEFDK 119

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYA 224
             ++N+ G +   E ++ ++ +      V T S GG+                     YA
Sbjct: 120 VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------GIGNQSGYA 166

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------- 277
             K   V LT   +  Y   GI   ++ PG   TP V  SM   +               
Sbjct: 167 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN 226

Query: 278 ------TSEEGADTVLWLA 290
                  + E A  V +L 
Sbjct: 227 PSKRYGEAPEIAAVVAFLL 245

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 30/251 (11%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNEN 113
           M   ++GK  ++TG++ GIG ATA   A  GA V +   ++    +  ++++R+  G  +
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG--D 58

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNV 170
                 DL++    +   + F  K   + VL+NNAG L   + +       ++     N+
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANI 118

Query: 171 LGTYTITESMVPLLEKAAPDA----RVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYA 224
                 T+  +P L  AA  +     VI+  S  G               G   G   Y 
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT-------------GGGPGAGLYG 165

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGN-----LRTS 279
             K     + + W + + + G+ F  + PG  +T   A       +R +         T+
Sbjct: 166 AAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTA 225

Query: 280 EEGADTVLWLA 290
           EE A   L+ A
Sbjct: 226 EEMAPAFLFFA 236

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 91.1 bits (227), Expect = 2e-21
 Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 17/163 (10%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-N 113
            +         +TGA +G G A A   A  G ++ +  R +E+    L A+  +   +  
Sbjct: 15  PRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREER----LQALAGELSAKTR 70

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNV 170
           V     D+     + +  +    +   +  L+NNAG+    +  +    + ++     N+
Sbjct: 71  VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI 130

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSS---------GGMYTA 204
            G    T  ++P L      A ++ + S           +Y  
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGG 173

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 90.6 bits (226), Expect = 3e-21
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++ K  +VTG   GIG+A  E  A  GA ++   R++ +    LS  + K     V   
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGS 68

Query: 118 LCDLSSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTY 174
           +CD S   E +      S      + +L+NN G + +   +  T+E F  + + N+   Y
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 128

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
            +++   PLL KA+    +I +SS
Sbjct: 129 HLSQLAHPLL-KASGCGNIIFMSS 151

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 59/252 (23%), Positives = 93/252 (36%), Gaps = 34/252 (13%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           + +R+EGK  +VTGA++GIG A A   A  GA V +  R+          I    G E  
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAA 60

Query: 115 HLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFA 167
            L   D+      ++       RF      +    NNAG L     I   + EG+     
Sbjct: 61  ALA-GDVGDEALHEALVELAVRRFG----GLDTAFNNAGALGAMGEISSLSVEGWRETLD 115

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
            N+   +   +  VP +      +   T S  G             +  F G+  YA +K
Sbjct: 116 TNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH------------TAGFAGVAPYAASK 163

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR---------T 278
              + L +  +     +GI   ++ PG  +TP    ++P       G +           
Sbjct: 164 AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIAR 223

Query: 279 SEEGADTVLWLA 290
            EE A+  L+LA
Sbjct: 224 PEEIAEAALYLA 235

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 91.1 bits (227), Expect = 3e-21
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK   +TG   G+G      L+S GA   +  R  +  +     I S+TGN+ VH   C
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK-VHAIQC 83

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVLGTY 174
           D+     +++  +         ++++NNA     N +     ++   ++    + + GT 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAG---NFISPTERLSPNAWKTITDIVLNGTA 140

Query: 175 TITESMVPLLEKAAPDARVITVSS-----GGMYTAH 205
            +T  +   L KA   A  +++++     G  +   
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP 176

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 90.8 bits (226), Expect = 3e-21
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 16/165 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRG---ATVYMVCRSKEKGETALSAIRSKTGN 111
              R+  K  ++TGA+AGIG ATA            + +  R  EK E     I  +  N
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN 86

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAV 168
             VH+   D++   +IK F      + K + +LVNNAG     +    I +E  +  F  
Sbjct: 87  AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSS---------GGMYTA 204
           NV     IT++++P+  +A     ++ + S         G +Y A
Sbjct: 147 NVTALINITQAVLPIF-QAKNSGDIVNLGSIAGRDAYPTGSIYCA 190

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 90.4 bits (225), Expect = 4e-21
 Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 44/270 (16%)

Query: 39  TKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG 98
             +    +   F P+ +      K   +TG  +GIG+  AE     G    +  RS  + 
Sbjct: 9   GDDCLPAYRHLFCPDLL----RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV 64

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-- 156
            TA   +   TG         D+ +   + +  ++   +   + +L+N A     N L  
Sbjct: 65  LTAARKLAGATGRR-CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG---NFLCP 120

Query: 157 ---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-----GGMYTAHLTD 208
              ++   F+    ++  GT+ ++  +     +      ++ +++     G     H   
Sbjct: 121 AGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFR-DHGGVIVNITATLGNRGQALQVH--- 176

Query: 209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
                             K    A+T   +  +  + I   S+ PG        + +   
Sbjct: 177 --------------AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP 222

Query: 269 NERFAGNLR--------TSEEGADTVLWLA 290
               +  +            E A +VL+LA
Sbjct: 223 QASLSTKVTASPLQRLGNKTEIAHSVLYLA 252

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 89.6 bits (223), Expect = 5e-21
 Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 36/259 (13%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
           GK  +VTG + GIG +  + L S      +   ++   E  L  ++ K G +     + D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS--EAPLKKLKEKYG-DRFFYVVGD 58

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTIT 177
           ++  + +K   N     +  +  LV NAGVLE  + +       ++  + +N     ++ 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
              +P L+K      V+ VSS                  F     Y  +K          
Sbjct: 119 GIALPELKKTN--GNVVFVSSDACNMY------------FSSWGAYGSSKAALNHFAMTL 164

Query: 238 SEMYKEKGIGFYSMHPGWAETP-------------GVAKSMPSFNERFA-GNLRTSEEGA 283
           +   +E+ +   ++ PG  +T                A+ +  F        L  S   A
Sbjct: 165 AN--EERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPA 222

Query: 284 DTVLWLALQPKEKLVSGSF 302
                LAL      V+G +
Sbjct: 223 TVYAKLALHGIPDGVNGQY 241

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 89.6 bits (223), Expect = 7e-21
 Identities = 50/257 (19%), Positives = 89/257 (34%), Gaps = 43/257 (16%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   + GK  +VTGA  GIG A AE L  +GA V +V  + E G    +A+  +   +  
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS-EGFELNFAVNV--- 170
               CD++   +++    +       + +LVNNAG       + + + +E    +N+   
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG-------VNNEKNWEKTLQINLVSV 113

Query: 171 -LGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
             GTY   + M    +       +I +SS  G+                     Y  +K 
Sbjct: 114 ISGTYLGLDYMSK--QNGGEGGIIINMSSLAGLM-------------PVAQQPVYCASKH 158

Query: 229 VQVALT--EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--------- 277
             V  T     +      G+   ++ PG+  T  +       N       +         
Sbjct: 159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY 218

Query: 278 ----TSEEGADTVLWLA 290
                    A+ ++ L 
Sbjct: 219 YGILDPPLIANGLITLI 235

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 89.1 bits (222), Expect = 8e-21
 Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 26/249 (10%)

Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           F  +++  R++GK  ++TGA AGIG   A   A+ GA+V +   + +     +  I+   
Sbjct: 2   FNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL- 58

Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAV 168
           G +      CD++S  E+ + A+    K   V +LVNNAG        +    F   + +
Sbjct: 59  GGQAFACR-CDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYEL 117

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           NV   + +++ + P +EK      ++T++S                  +   M  YA +K
Sbjct: 118 NVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN------------KNI-NMTSYASSK 163

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNERFA-----GNLRTSEE 281
                L    +    EK I    + PG   T  +   + P   ++         L   ++
Sbjct: 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQD 223

Query: 282 GADTVLWLA 290
            A+  L+L 
Sbjct: 224 IANAALFLC 232

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 60/261 (22%), Positives = 104/261 (39%), Gaps = 31/261 (11%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++N   + M         ++TGA +GIG ATA  LA+ G TV  + R++ + E     I 
Sbjct: 15  TENLYFQSMM-NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV 73

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFE 163
              G + + LE  D+S   ++++      LK   + ++V NAG+      I       ++
Sbjct: 74  GA-GGQAIALE-ADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWD 131

Query: 164 LNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY 223
              AVN+ GT+      VP L++    A V+  S  G             + +  G   Y
Sbjct: 132 ETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT-----------RTFTTPGATAY 180

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------ 277
              K  QVA+ ++ +    +  I   ++ PG  ET     +     E  A  +       
Sbjct: 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV 240

Query: 278 --------TSEEGADTVLWLA 290
                    SE+ A+ + +L 
Sbjct: 241 PITDGQPGRSEDVAELIRFLV 261

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 24/250 (9%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  MQ   + +  +VTG  +GIG   A GL + GA+V +V R+ +K   A+  + +   N
Sbjct: 2   PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61

Query: 112 -ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFA 167
              +  E  D+++  E     +  +  +  +H +V+ AG  EN   I    SE +     
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           +NV GT  + +     + +    + V   S     T                   Y   K
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-------------HRWFGAYGVTK 168

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFAGN-----LRTSE 280
                L +  ++      +   S+ PG   T  VA        +  +A           E
Sbjct: 169 SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE 228

Query: 281 EGADTVLWLA 290
           + A+  ++L 
Sbjct: 229 DVANMAMFLL 238

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 22/239 (9%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R+ GK  +V+G   G+G +    + + GA V       E+G+   + +     +   
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAAR 56

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
           ++   D++   + K+  +        +HVLVNNAG+L    +       ++    VN+ G
Sbjct: 57  YVH-LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTG 115

Query: 173 TYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
            +    ++V  +++A     +I +SS  G+             G+      Y   K    
Sbjct: 116 VFLGIRAVVKPMKEAGR-GSIINISSIEGLA------------GTV-ACHGYTATKFAVR 161

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
            LT+  +      GI   S+HPG  +TP          +   G      E ++ V++LA
Sbjct: 162 GLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLA 220

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 51/257 (19%), Positives = 85/257 (33%), Gaps = 38/257 (14%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVH 115
            R   K  ++TG++ GIG  TA   A  GA V +  RS E+ E     I     +E  V+
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI------TSEGFELNFAVN 169
             + D+++        N    +   + VLVNNAG    +           + +     +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           +     +T+ + P L  +     ++ VSS   G               +      YA  K
Sbjct: 122 LQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQ-------------AQPDFLYYAIAK 166

Query: 228 RVQVALTEKWSEMYKEKGI-------GFYS--MHPGWAETPGVAKSMPSFNERFA----- 273
                 T   +    + GI       G                ++   +F          
Sbjct: 167 AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI 226

Query: 274 GNLRTSEEGADTVLWLA 290
           G     E  A+ +L+LA
Sbjct: 227 GAAGKPEHIANIILFLA 243

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 87.6 bits (218), Expect = 2e-20
 Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 18/152 (11%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VTGA AG G         +G  V    R +E+    L  ++ + G +N+++   D+ + 
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELG-DNLYIAQLDVRNR 58

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITESMV 181
             I+        +   + +LVNNAG+   +E     + E +E     N  G   +T +++
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 182 PLLEKAAPDARVITVSS---------GGMYTA 204
           P +        +I + S         G +Y A
Sbjct: 119 PGM-VERNHGHIINIGSTAGSWPYAGGNVYGA 149

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 14/157 (8%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           +  K  ++TGA+ GIG   A  L   GA + +  R + + E   + IR   G      ++
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQV 59

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            D++    + +FA         + VLVNNAGV+  + L  +  + +E    VN+ G    
Sbjct: 60  LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWG 119

Query: 177 TESMVPLLEKAAPDARVITVSS---------GGMYTA 204
             +++P++ +A    ++I + S           +Y A
Sbjct: 120 IGAVLPIM-EAQRSGQIINIGSIGALSVVPTAAVYCA 155

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 21/164 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M + ++GK  ++TGA++GIG ATA  LA+ GA V +  R  EK       + +      V
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KV 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVN 169
           H+   D++    + +           + +LVNNAG+     +E+        +      N
Sbjct: 59  HVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADT---TDWTRMIDTN 115

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS---------GGMYTA 204
           +LG   +T + +P L ++     V+ +SS           +Y A
Sbjct: 116 LLGLMYMTRAALPHLLRS--KGTVVQMSSIAGRVNVRNAAVYQA 157

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 87.6 bits (218), Expect = 3e-20
 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 5/149 (3%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M   ++G++ VVTG   GIG   A   A  GA V +  RS    +  ++ +      
Sbjct: 2   PGSMF-DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG 60

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVN 169
           + V     D+S   +  + A R   +   + V+  NAGV  +  L   T E     FAVN
Sbjct: 61  K-VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVN 119

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS 198
           V GT+   ++ +  L  +    RV+  SS
Sbjct: 120 VNGTFYAVQACLDALIASG-SGRVVLTSS 147

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 87.7 bits (218), Expect = 4e-20
 Identities = 51/268 (19%), Positives = 91/268 (33%), Gaps = 68/268 (25%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M      K  V+TGA++GIG A A   +  G  + ++ R  E+    L A+       N 
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER----LKALNL----PNT 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVN 169
                D++      +   R      P   +VNNAG+     ++         ++  F VN
Sbjct: 62  LCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEA---NEWQRMFDVN 118

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS---------GGMYTA------HLTDDLEFNS 214
           VLG     ++++  + KA     +I +SS            Y         +++++    
Sbjct: 119 VLGLLNGMQAVLAPM-KARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVR--- 174

Query: 215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET--------PGVAKSMP 266
                 E  A N RV                     + P   +T          +     
Sbjct: 175 -----EEVAASNVRV----MT---------------IAPSAVKTELLSHTTSQQIKDGYD 210

Query: 267 SFNERFAGNLRTSEEGADTVLWLALQPK 294
           ++     G L  +++ A  VL+   QP+
Sbjct: 211 AWRVDMGGVL-AADDVARAVLFAYQQPQ 237

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 87.2 bits (217), Expect = 4e-20
 Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 30/249 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
            Q  ++ K  +VTGA +GIG A A+  A   + V  V   +++    +  +R       V
Sbjct: 2   YQ-SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EV 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVL 171
                D+S   +++ F  R       + VL NNAG+++    +   + E +E   AVN+ 
Sbjct: 59  LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLY 118

Query: 172 GTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
             +  + +++P++ K      ++  +S  G+                     Y   K   
Sbjct: 119 SAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR-------------GGFAGAPYTVAKHGL 164

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR---------TSEE 281
           + LT   +  Y ++GI   ++ PG  +T     S            +           E+
Sbjct: 165 IGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPED 224

Query: 282 GADTVLWLA 290
            A+ +++LA
Sbjct: 225 IANVIVFLA 233

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 87.3 bits (217), Expect = 5e-20
 Identities = 62/248 (25%), Positives = 90/248 (36%), Gaps = 26/248 (10%)

Query: 51  KPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG 110
             + M   + G+  VVTGA+ GIG A A  L S GA V +  R  EK       I +  G
Sbjct: 20  DDKHMS-SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG 78

Query: 111 NENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFA 167
                   CDLS    I +FA      +    VLVNNAGV      +       ++   A
Sbjct: 79  --EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           VN+   Y +  +  P +  A     +I +SS  G    A                  Y  
Sbjct: 137 VNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVA--------------DGAAYTA 181

Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADT 285
           +K     L    +E  ++  +    + PG   T      +    ++ A      ++ AD 
Sbjct: 182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTE-FGVGLS--AKKSALGAIEPDDIADV 238

Query: 286 VLWLALQP 293
           V  LA Q 
Sbjct: 239 VALLATQA 246

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 87.2 bits (217), Expect = 5e-20
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 35/258 (13%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++N   + M   +  + C+VTG  +GIG ATAE  A  GA V +   +++      + I 
Sbjct: 15  TENLYFQSM--DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI- 71

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFEL 164
              G++   +   D+SS  + +S   + + K   V VLVNNAG      +  I  E ++ 
Sbjct: 72  ---GSKAFGVR-VDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDR 127

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQY 223
             +VNV G +  ++ ++P++ +      +I  +S                  +      Y
Sbjct: 128 IMSVNVKGIFLCSKYVIPVM-RRNGGGSIINTTSYTATS-------------AIADRTAY 173

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERFA---- 273
             +K    +LT   +  + ++GI   ++ PG  ++P   K              F     
Sbjct: 174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV 233

Query: 274 -GNLRTSEEGADTVLWLA 290
              + T+EE A+ +L+LA
Sbjct: 234 MDRMGTAEEIAEAMLFLA 251

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 86.4 bits (215), Expect = 7e-20
 Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 48/249 (19%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
             N +VTG + GIG A  E L        +    ++               EN+     D
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKAD 52

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           L+   +I +  +   +KN     +  NAG+L    +  I  E  +    +NV  +    +
Sbjct: 53  LTKQQDITNVLDI--IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 179 SMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
            +   L+     A ++   S                  +      Y  +K     +T+  
Sbjct: 111 GLENNLKVG---ASIVFNGSDQCFI-------------AKPNSFAYTLSKGAIAQMTKSL 154

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR----------------TSEE 281
           +    +  I   ++ PG  +T      +  +      +                    +E
Sbjct: 155 ALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQE 214

Query: 282 GADTVLWLA 290
            A+ V++L 
Sbjct: 215 IAELVIFLL 223

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 87.3 bits (217), Expect = 7e-20
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++ F+PE +Q    GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S   
Sbjct: 18  NEEFRPEMLQ----GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL 73

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFEL 164
              G  + H     +  +T  + F  +       + +L+ N     +  L          
Sbjct: 74  E-LGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRK 132

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
           +  VN L    +T + +P+L+++  +  ++ VSS
Sbjct: 133 SMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSS 164

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 86.5 bits (215), Expect = 9e-20
 Identities = 59/259 (22%), Positives = 93/259 (35%), Gaps = 43/259 (16%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++N   + MQ   EGK  +VTGA  GIG A    L + GA V +  R+       L  + 
Sbjct: 15  TENLYFQSMQ-GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HLP 72

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFEL 164
                        DL             +     + ++VNNAGV+   R+   T   + L
Sbjct: 73  ------------GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSL 120

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQY 223
           +  VNV   + I  + +PL+  A     ++ V+S  G+                 G   Y
Sbjct: 121 SLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR-------------PGPGHALY 166

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------PSFNERFA--- 273
              K    +LT+     +  +GI   ++ P    TP +                      
Sbjct: 167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV 226

Query: 274 --GNLRTSEEGADTVLWLA 290
             G +   E+ AD VL+LA
Sbjct: 227 PLGRIAEPEDIADVVLFLA 245

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 28/242 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK  ++TG   G+G   A    + GA V +     E+G      +    G+   +  
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQH 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++   + +        +   V  LVNNAG+     L   + E F     +N+ G + 
Sbjct: 58  -LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116

Query: 176 ITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
             ++++P ++ A     ++ +SS  G+             G       Y  +K     L+
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAGLM------------GLA-LTSSYGASKWGVRGLS 162

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL------RTSEEGADTVLW 288
           +  +       I   S+HPG   TP  A++     E    N           E A  V+ 
Sbjct: 163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK 222

Query: 289 LA 290
           L 
Sbjct: 223 LL 224

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 53/250 (21%), Positives = 88/250 (35%), Gaps = 24/250 (9%)

Query: 51  KPEDMQARIEGKNCVVTGA-NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           K  D    ++GK  +VT A   GIG  TA      GA V +    + +       +    
Sbjct: 12  KEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL- 70

Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFA 167
           G   V   +CD++S   + +   +   K   + VLVNNAG+     +  +T E ++    
Sbjct: 71  GLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           V +      T + +           ++  +S  G                      YA  
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR------------AQH-SQSHYAAA 177

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERFA-----GNLRTSE 280
           K   +ALT   +    E G+   ++ P  A    + K+      +R A     G      
Sbjct: 178 KAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPW 237

Query: 281 EGADTVLWLA 290
           E A T+ +LA
Sbjct: 238 EVAATIAFLA 247

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++ K  VVTGA  G+G    + L+ R   VY + R+ E     L+A+    G E +  +
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLS-RDHIVYALGRNPEH----LAALAEIEGVEPIESD 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYT 175
           +                      V  LV+ A V  +  +       +  +  +NV+    
Sbjct: 57  IVKEVLEEGGVDKLKNL----DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAE 112

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++  ++P L  A     VI ++SG                   G   YA +K     L +
Sbjct: 113 LSRQLLPALRAA--SGCVIYINSGAGNGP------------HPGNTIYAASKHALRGLAD 158

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR-TSEEGADTVLWLALQP 293
            + +     GI   ++ PG   TP +   M S    F   +    +E A+ + ++    
Sbjct: 159 AFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAG 217

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 36/253 (14%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M A +E K  ++TGA  GIG  T+  LA  GA V +    +     A +++    G 
Sbjct: 2   PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GR 57

Query: 112 ENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFE 163
             VH    DL++   +++      + F      + ++ NNA   +   +    +T + ++
Sbjct: 58  GAVHHV-VDLTNEVSVRALIDFTIDTFG----RLDIVDNNAAHSDPADMLVTQMTVDVWD 112

Query: 164 LNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQY 223
             F VN  GT  + +  +P L  A   A V   S+                 ++D    Y
Sbjct: 113 DTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-------------AYDMSTAY 159

Query: 224 ARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERFA-----GNLR 277
           A  K     LT   +  Y   G+   ++ PG   TP +   +P    + FA     G + 
Sbjct: 160 ACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIG 219

Query: 278 TSEEGADTVLWLA 290
              E A+ V +LA
Sbjct: 220 EPHEIAELVCFLA 232

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 84.9 bits (211), Expect = 3e-19
 Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 41/261 (15%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  +  GK C+VTGA   IG ATA  LA  G  + ++  ++E  E A +++R K      
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EA 58

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVL 171
              +CD++S   +    +        +  L NNAG       +    S+ F     +NV 
Sbjct: 59  RSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVT 118

Query: 172 GTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
           G + + +++   +       R++  +S  G+                  M  Y  +K   
Sbjct: 119 GAFHVLKAVSRQMITQN-YGRIVNTASMAGVK-------------GPPNMAAYGTSKGAI 164

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------------- 277
           +ALTE  +       I   ++ PG+     + +       +                   
Sbjct: 165 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG 224

Query: 278 --------TSEEGADTVLWLA 290
                      E    V +L 
Sbjct: 225 SVPMRRYGDINEIPGVVAFLL 245

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 84.8 bits (211), Expect = 3e-19
 Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 4/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK  +VTG+  G+G+A AEGLA+ GA V +          ++  +  K    + H  
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGV 63

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             D++    I++  ++   +   V +L+NNAG+     ++    E ++     N+   + 
Sbjct: 64  AFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFL 123

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           ++ S    +       ++I + S
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGS 146

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 85.0 bits (211), Expect = 3e-19
 Identities = 61/266 (22%), Positives = 95/266 (35%), Gaps = 40/266 (15%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
           A + G+ CVVTGA+ GIG   A  L   GATVY+  R  +         +S  G + V +
Sbjct: 1   APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPV 59

Query: 117 ELCDLSSITEIKSFANRFSL-KNKPVHVLVNNAGVLENNRLITSEG---------FELNF 166
             CD S  +E++S   +    +   + VLVNNA       L T            ++   
Sbjct: 60  V-CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ--YA 224
            V + G Y  +     L+   A    ++ +SS                GS   M    Y 
Sbjct: 119 NVGLRGHYFCSVYGARLMVP-AGQGLIVVISSP---------------GSLQYMFNVPYG 162

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP----------GVAKSMPSFNERFAG 274
             K     L    +   +  G+   S+ PG  +T            +   +    +    
Sbjct: 163 VGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFS 222

Query: 275 NLRTSEEGADTVLWLALQPKEKLVSG 300
           +  T+E     V+ LA  P    +SG
Sbjct: 223 SAETTELSGKCVVALATDPNILSLSG 248

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 84.9 bits (211), Expect = 3e-19
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 7/143 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + G+  +VTG + GIG A A  L   GATV +        +  ++ +            
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAV 63

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++    + +   +         +L  NAGV        IT E ++ NF VN  G + 
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
             +        +     ++  +S
Sbjct: 124 ANQIACRHFLASNTKGVIVNTAS 146

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 84.9 bits (211), Expect = 3e-19
 Identities = 54/241 (22%), Positives = 91/241 (37%), Gaps = 24/241 (9%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +     +VTGA AGIG A A   A  GA+V +     E  E   +AIR   G       
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGL 66

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTI 176
            C+++     ++       +   + VLVNNAG        +    FE  F +N+   + +
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 177 TESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++   P ++KA     ++ +SS  G               +   M  Y  +K     LT 
Sbjct: 127 SQLAAPHMQKAG-GGAILNISSMAGEN------------TNV-RMASYGSSKAAVNHLTR 172

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERF-----AGNLRTSEEGADTVLWL 289
             +      GI   ++ PG  +T  +A  +              G L  +++ A+  L+L
Sbjct: 173 NIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFL 232

Query: 290 A 290
            
Sbjct: 233 C 233

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 84.5 bits (210), Expect = 4e-19
 Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 28/248 (11%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNEN 113
           M   +EGK  V+TG++ G+G + A   A+  A V +  RS +++  + L  I+   G E 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEA 59

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
           + ++  D++  +++ +       +   + V++NNAG+        ++   +      N+ 
Sbjct: 60  IAVK-GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 172 GTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
           G +  +   +    +      VI +SS    +                     YA +K  
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--------------LFVHYAASKGG 164

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEEG 282
              +TE  +  Y  KGI   ++ PG   TP  A+      +R         G +   EE 
Sbjct: 165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224

Query: 283 ADTVLWLA 290
           A    WLA
Sbjct: 225 AAVAAWLA 232

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 84.1 bits (209), Expect = 5e-19
 Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 32/248 (12%)

Query: 56  QARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGNE 112
              ++ K  V+ G    +G  TA+  A     +   Y   +  +        +  +    
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-- 63

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNV 170
            V L   DLS+  E+    +    +   V + +N  G +    +   +   F+    +N 
Sbjct: 64  KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINN 123

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
              Y   +     +        +IT+++     YT   +               YA NK 
Sbjct: 124 KVAYFFIKQAAKHMNPN---GHIITIATSLLAAYTGFYST--------------YAGNKA 166

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEG 282
                T   S+   ++ I   ++ PG  +T          +  F         L   E+ 
Sbjct: 167 PVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDI 226

Query: 283 ADTVLWLA 290
           A  + +L 
Sbjct: 227 APIIKFLT 234

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 84.1 bits (209), Expect = 5e-19
 Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 33/249 (13%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
              R E K  +VTG+  GIG A AE LA  GA V +   + E  E     I +  G   +
Sbjct: 3   GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAI 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVN 169
            +   D+S     K+ A+R   +   +  LVNNA +    +L     I  E ++   +VN
Sbjct: 62  SVA-VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVN 120

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           + G    T ++   + K      ++  SS    +Y+ +                 Y   K
Sbjct: 121 LDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWLYSNY-----------------YGLAK 162

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERFA-----GNLRTSEE 281
                LT++ S     + I   ++ PG  +T     + P    +          + T ++
Sbjct: 163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDD 222

Query: 282 GADTVLWLA 290
                L+L 
Sbjct: 223 LVGMCLFLL 231

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 83.8 bits (208), Expect = 7e-19
 Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           MQ R+     +VTGA +GIG A +  LA  GATV      +   +  +  +      E  
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 115 HLEL-----CDLSSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRLI--TSEGFELNF 166
                     D+S     +    +     ++P  V+V+ AG+ ++  L+  + + ++   
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 120

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
           AVN+ GT+ +T++    L        +I +SS
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISS 152

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 83.7 bits (208), Expect = 8e-19
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + G+  +VTG + G+G+  A+GLA  G +V +  R+ E+   A   +  K G E     
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE-TMAF 76

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
            CD+S+  E+K        K   +  +VN AG+   +       + F     VN+ GTY 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 136

Query: 176 IT 177
           + 
Sbjct: 137 VC 138

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 83.3 bits (207), Expect = 9e-19
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 7/146 (4%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R+EGK+ ++TG+  GIG A AE     GATV +     E+   A + I    G    
Sbjct: 2   MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAY 57

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
            ++  D++    I +           + +LVNNA + +   +  IT E +E  FA+NV G
Sbjct: 58  AVQ-MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAG 116

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
           T    ++    +       ++I ++S
Sbjct: 117 TLFTLQAAARQMIAQGRGGKIINMAS 142

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 54/245 (22%), Positives = 94/245 (38%), Gaps = 29/245 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG   GIG A A      GA V +  R  + GE A  ++ +    +     
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ-- 60

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D S         +       PV  LVNNAG+  N  +   T+  +    AVN+ G + 
Sbjct: 61  -HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 176 ITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            T   +  ++     A +I +SS  G                   +  Y  +K     ++
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDP-------------SLGAYNASKGAVRIMS 166

Query: 235 EKWSEMY--KEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRT-------SEEGADT 285
           +  +     K+  +   ++HPG+ +TP V   +P   E  +   +T         + A  
Sbjct: 167 KSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYI 225

Query: 286 VLWLA 290
            ++LA
Sbjct: 226 CVYLA 230

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 55/255 (21%), Positives = 89/255 (34%), Gaps = 44/255 (17%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
              R  GK  VVTG   GIG        + GA V +  + +  G      +        +
Sbjct: 3   TGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF---I 59

Query: 115 HLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFA 167
               CD++   ++K+       RF      +  +VNNAG     +     +++GF     
Sbjct: 60  L---CDVTQEDDVKTLVSETIRRFG----RLDCVVNNAGHHPPPQRPEETSAQGFRQLLE 112

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           +N+LGTYT+T+  +P L K+     VI +SS  G                      Y   
Sbjct: 113 LNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAI-------------GQAQAVPYVAT 157

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----------GN 275
           K    A+T+  +      G+    + PG   TP   +      +  A           G 
Sbjct: 158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR 217

Query: 276 LRTSEEGADTVLWLA 290
           +    E     ++LA
Sbjct: 218 MGQPAEVGAAAVFLA 232

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 3/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
               K  +VTG N GIG A    +A+ GA V ++ RS          +  + G +    +
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
            CD+S+   +     +      P+  L+ NAGV         T E F   + VNV G + 
Sbjct: 71  -CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
              ++  L  +      ++  SS
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSS 152

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 12/153 (7%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSK 108
           P D    + GK  + TGA  GIG   A  L  RGA+V   Y    S +  E  ++ ++  
Sbjct: 12  PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNY--GSSSKAAEEVVAELKKL 69

Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNF 166
            G + V ++  D+S  +E+ +  ++       +  +++N+G+        +T E F+  F
Sbjct: 70  -GAQGVAIQ-ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVF 127

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSG 199
            +N  G + + +  +    +     R+I  SS 
Sbjct: 128 NLNTRGQFFVAQQGLKHCRRG---GRIILTSSI 157

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 29/250 (11%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGN 111
            Q+  +    +VTG + GIG A     A +G  V   Y    ++E  +  ++AI    G 
Sbjct: 20  FQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNY--AANREAADAVVAAITESGG- 76

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAV 168
                   D+ +  +I +  +    +   +  LVNNAG+++  + +   + E  E    V
Sbjct: 77  -EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 169 NVLGTYTITESMVPLLEKAAPDA--RVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
           NV G+       V  + +        ++ VSS                GS      YA +
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL-----------GSATQYVDYAAS 184

Query: 227 KRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK-SMPSFNERFAGNL---R--TSE 280
           K      T   +     +GI   ++ PG  ET   A   +P      A ++   R    E
Sbjct: 185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPE 244

Query: 281 EGADTVLWLA 290
           E AD +L+L 
Sbjct: 245 EVADAILYLL 254

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 82.9 bits (206), Expect = 1e-18
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 25/243 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +E K  +VT +  GIG A A  LA  GA V +  R +E  +  ++ ++ +    +V   
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGT 68

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
           +C +    + +         +  V +LV+NA V      I   T E ++    VNV  T 
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATV 128

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            +T+++VP +EK      V+ VSS G Y              F  +  Y  +K   + LT
Sbjct: 129 LMTKAVVPEMEKRG-GGSVLIVSSVGAYHP------------FPNLGPYNVSKTALLGLT 175

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP--GVAKSMPSFNERFAGNL---R--TSEEGADTVL 287
           +  +     + I    + PG  +T    V     +  E    +L   R    E+ A  V 
Sbjct: 176 KNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVS 235

Query: 288 WLA 290
           +L 
Sbjct: 236 FLC 238

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 50/243 (20%), Positives = 81/243 (33%), Gaps = 41/243 (16%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
               ++TGA+ GIG ATA  L ++G  V ++ R +++ +   + +      E       D
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGD 58

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITE 178
           +    +              +  LVNNAGV     +     E + L    N+ G +    
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118

Query: 179 SMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
             VP L        ++ V S  G                F G   Y  +K   + L    
Sbjct: 119 HAVPAL-LRRGGGTIVNVGSLAGKNP-------------FKGGAAYNASKFGLLGLAGAA 164

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------TSEEGADTVLWLAL 291
               +E  +   ++ PG  +T             FAGN          E+ A  VL+   
Sbjct: 165 MLDLREANVRVVNVLPGSVDTG------------FAGNTPGQAWKLKPEDVAQAVLFALE 212

Query: 292 QPK 294
            P 
Sbjct: 213 MPG 215

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 49/262 (18%), Positives = 87/262 (33%), Gaps = 37/262 (14%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
                P+    R++ K  ++TG   GIG  TA+     GA V +   + + G+   + I 
Sbjct: 2   GSTSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG 61

Query: 107 SKTGNENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRL----IT 158
           S      VH   CD++   ++++       +       + ++  N GVL           
Sbjct: 62  SPDVISFVH---CDVTKDEDVRNLVDTTIAKHG----KLDIMFGNVGVLSTTPYSILEAG 114

Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD 218
           +E F+    +NV G + + +    ++  A   + V T S                     
Sbjct: 115 NEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT------------AGEG 162

Query: 219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRT 278
               Y   K   + LT        E GI    + P    +P +       + R       
Sbjct: 163 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQ 222

Query: 279 S----------EEGADTVLWLA 290
           +          E+ AD V +LA
Sbjct: 223 AANLKGTLLRAEDVADAVAYLA 244

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 44/263 (16%)

Query: 53  EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGN 111
                 +  K  V+TG+ +GIG A A  LA  GA + +    + ++  T    +   +  
Sbjct: 17  NLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG 76

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVN 169
             +H    D++  +EI       + +     +LVNNAGV    ++     E ++   AVN
Sbjct: 77  TVLHHP-ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN 135

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS-----GGMYTAHLTDDLEFNSGSFDGMEQYA 224
           +  ++      +P + K     R+I ++S        + +                  Y 
Sbjct: 136 LSSSFHTIRGAIPPM-KKKGWGRIINIASAHGLVASPFKSA-----------------YV 177

Query: 225 RNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA----------- 273
             K   + LT+  +    E G+   S+ PG+  TP V K +P                  
Sbjct: 178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM 237

Query: 274 ------GNLRTSEEGADTVLWLA 290
                     T E+ A   L+LA
Sbjct: 238 LKGQPTKKFITVEQVASLALYLA 260

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 61/250 (24%), Positives = 96/250 (38%), Gaps = 36/250 (14%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGN 111
           +Q R   +  VV GA   IG A A   A  GA V   Y    + E   TA++ I    G 
Sbjct: 3   LQ-RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTY--NGAAEGAATAVAEIEKL-GR 58

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAV 168
             + ++  DL++  E+++  +  + K   +H LV+ AG L   + I       +     V
Sbjct: 59  SALAIK-ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
           N+   +   ++ +P + K      ++T SS                G   G   YA +K 
Sbjct: 118 NLTSLFLTAKTALPKMAKG---GAIVTFSSQAGRD-----------GGGPGALAYATSKG 163

Query: 229 VQVALTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPS-FNERFAGNL---R--TSE 280
             +  T   +   KE    I   ++ PG   T            ER AG     R  +SE
Sbjct: 164 AVMTFTRGLA---KEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSE 220

Query: 281 EGADTVLWLA 290
           + A  V +LA
Sbjct: 221 DVAGLVAFLA 230

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 62/262 (23%), Positives = 95/262 (36%), Gaps = 33/262 (12%)

Query: 42  GFKEHSKNFKPEDMQA--RIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKE 96
           G    ++N   + M     + GK   VTG + GIG A A+ LA  GA V   Y    + E
Sbjct: 10  GVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTY--VNAAE 67

Query: 97  KGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR 155
           + +  +S I    G    +     D      I+            + +LVN+AG+  +  
Sbjct: 68  RAQAVVSEIEQAGGRAVAIR---ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP 124

Query: 156 L--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN 213
           L   T   F+   AVN    +    S    L       R+IT+ S     A L       
Sbjct: 125 LEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG---GRIITIGSN---LAELV------ 172

Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
              + G+  Y+ +K     LT+  +     +GI    +HPG  +T           E   
Sbjct: 173 --PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-GDHAEAQR 229

Query: 274 -----GNLRTSEEGADTVLWLA 290
                G+    ++ A  V WLA
Sbjct: 230 ERIATGSYGEPQDIAGLVAWLA 251

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 40  KNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKG 98
            +G    ++N   + M  +      +VTG   GIG   A  LA+ G  + +      E  
Sbjct: 8   SSGVDLGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-- 156
              ++ +        V     DL+ ++  ++  +    +   +  LVNNAG+    R   
Sbjct: 68  APVIAELSGLGA--RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDF 125

Query: 157 --ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA--RVITVSS 198
             +  E F+    VN+ GT   T++++  +  +   A   +I ++S
Sbjct: 126 LDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITS 171

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 82.3 bits (204), Expect = 3e-18
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  +++ +  +VTGA++G+G A    LA  GATV  +      GE   + +        V
Sbjct: 1   MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAV 55

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG------FELNFAV 168
                D+++  +  +       +   VH LVN AG     +++   G      F    AV
Sbjct: 56  RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115

Query: 169 NVLGTYTITESMVPLLEKAAPDA-----RVITVSS 198
           N++GT+ +      ++ +  PDA      ++  +S
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS 150

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 82.7 bits (205), Expect = 3e-18
 Identities = 36/149 (24%), Positives = 54/149 (36%), Gaps = 4/149 (2%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
              +   +  ++ +VTG   GIG   A   A  GA V +  RS  +  +  + +      
Sbjct: 32  ERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG 91

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVN 169
             V     D+S        A         + V+  NAG+    RL   T E       VN
Sbjct: 92  N-VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVN 150

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS 198
           V GT    ++ +  L  +    RVI  SS
Sbjct: 151 VKGTVYTVQACLAPLTASG-RGRVILTSS 178

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 46  HSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETAL 102
           H +N     +  R++GK  +VTG+  GIG A A  L   GA V   Y    S +  E  +
Sbjct: 3   HVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY--ANSTKDAEKVV 60

Query: 103 SAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITS 159
           S I++   +   +     D+  + EI    ++       + + V+N+GV+    L  +T 
Sbjct: 61  SEIKALGSDAIAIK---ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE 117

Query: 160 EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG 199
           E F+  F++N  G + +       L +     R++  SS 
Sbjct: 118 EEFDRVFSLNTRGQFFVAREAYRHLTEG---GRIVLTSSN 154

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 59/261 (22%), Positives = 94/261 (36%), Gaps = 35/261 (13%)

Query: 46  HSKNFKPEDMQ-ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA 104
            ++   P  M    + GK  +VTGA AGIG A A  LA  G  V       +  + A + 
Sbjct: 13  EAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK 72

Query: 105 IRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
           I    G         D+S   +I +  +        V  LV NAGV+    L   T E F
Sbjct: 73  I----GCGAAACR-VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDF 127

Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGME 221
           +   A+N+ G +  T+   P +        ++ +SS  G               +  G  
Sbjct: 128 DRVIAINLRGAWLCTKHAAPRM-IERGGGAIVNLSSLAGQV-------------AVGGTG 173

Query: 222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR---- 277
            Y  +K   + L+   +   +  GI   ++ P + +TP    +M  F+            
Sbjct: 174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI 233

Query: 278 --------TSEEGADTVLWLA 290
                     EE A  V++L 
Sbjct: 234 ARLQGRMAAPEEMAGIVVFLL 254

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 9/142 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +     ++TGA+  +G   A  L   G  V +  R++    T L    +      ++  
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVA----LY-- 77

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTI 176
             D S  T I +F +    +   +  +V+NA           ++ F   F+V++L  Y I
Sbjct: 78  -GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 177 TESMVPLLEKAAPDARVITVSS 198
                PLL  +   A ++ +S 
Sbjct: 137 NLHCEPLLTASEV-ADIVHISD 157

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 81.4 bits (202), Expect = 4e-18
 Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 28/243 (11%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            +  +VTGA++G G A A    +RG  V  +  S E  E           ++ + +   D
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVR-AD 60

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVLGTYT 175
           ++   ++ +       +   + VLVNNAG+  N+          E F+   AVNV G + 
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 176 ITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              +++P +        ++ ++S   +              +F G   Y  +K   + LT
Sbjct: 121 GCRAVLPHMLLQG-AGVIVNIASVASLV-------------AFPGRSAYTTSKGAVLQLT 166

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFA-----GNLRTSEEGADTVL 287
           +  +  Y   GI   ++ PG  ETP     +  P   ++         + T+ + AD V+
Sbjct: 167 KSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVM 226

Query: 288 WLA 290
           +LA
Sbjct: 227 FLA 229

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 81.4 bits (202), Expect = 5e-18
 Identities = 63/262 (24%), Positives = 93/262 (35%), Gaps = 36/262 (13%)

Query: 42  GFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKG 98
           G    ++N   + M      K  +VTGA+ GIG A A  LAS G TV   Y         
Sbjct: 10  GVDLGTENLYFQSMM--ETNKVAIVTGASRGIGAAIAARLASDGFTVVINY--AGKAAAA 65

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-- 156
           E     I +  G         D+S    ++            V VLVNNAG++    +  
Sbjct: 66  EEVAGKIEAAGG--KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAE 123

Query: 157 ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNS 214
                F+   AVN+ GT+         L       R+I +S+   G+             
Sbjct: 124 TGDAVFDRVIAVNLKGTFNTLREAAQRLRVG---GRIINMSTSQVGLLHP---------- 170

Query: 215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNERFA 273
                   YA  K    A+T   S+  + + I   ++ PG   T    +       +RFA
Sbjct: 171 ----SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFA 226

Query: 274 GN-----LRTSEEGADTVLWLA 290
                  L T ++ A  V +LA
Sbjct: 227 KLAPLERLGTPQDIAGAVAFLA 248

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 81.0 bits (201), Expect = 5e-18
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              GKN  VTGA  GIGYATA      GA V                            E
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKV------------TGFDQAFTQEQYPFATE 51

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
           + D++   ++     R   + + +  LVN AG+L        + E ++  FAVNV G + 
Sbjct: 52  VMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           + +  +    +      ++TV+S
Sbjct: 112 LFQQTMNQFRRQR-GGAIVTVAS 133

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 80.3 bits (199), Expect = 6e-18
 Identities = 37/237 (15%), Positives = 65/237 (27%), Gaps = 37/237 (15%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           ++TGA  G+G A A  L   G  + +  R           +              DL+  
Sbjct: 4   LITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVG-------ARALPADLADE 54

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP 182
            E K+          P+ +LV+  G      +     +  E   A ++L    + +    
Sbjct: 55  LEAKALLEEAG----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHAR- 109

Query: 183 LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK 242
                   AR +   +   Y                G   YA  K    A  E   +   
Sbjct: 110 ----FQKGARAVFFGAYPRYVQ------------VPGFAAYAAAKGALEAYLEAARKELL 153

Query: 243 EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVS 299
            +G+    +      T      + +          + EE A  VL    +     + 
Sbjct: 154 REGVHLVLVRLPAVATG-----LWAPLGGPPKGALSPEEAARKVLEGLFREPVPALL 205

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 81.4 bits (202), Expect = 7e-18
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 4/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + GK  ++TGA+ GIG   A   A  GA V +  R  +  +     I    G + + + 
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA-GVGGKALPIR 87

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
            CD++   +++   ++ + +   + + V NAG++    ++    E F+     NV G + 
Sbjct: 88  -CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFL 146

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
             ++    +        +IT +S
Sbjct: 147 TAQAAARAMVDQGLGGTIITTAS 169

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 81.0 bits (201), Expect = 7e-18
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 5/120 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ +  +VTG    IG A    LA  GA V +    +     A+  +R   G++   + 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR-MEGHDVSSVV 68

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
             D+++   +++       +   V +LV  AG+  +       T   +     +N+ G +
Sbjct: 69  -MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMF 127

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 81.1 bits (201), Expect = 8e-18
 Identities = 51/269 (18%), Positives = 89/269 (33%), Gaps = 73/269 (27%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
            M+     K  +VTG ++GIG A  + L   GA V  V   ++         +       
Sbjct: 8   HME-EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK------- 59

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
                 D+++  E+K    + + K   + +LVNNAG+ + + L    +E +     VNV 
Sbjct: 60  -----IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGM--------YTA------HLTDDLEFNSGSF 217
           G+Y + +  +P++      + +   S            Y         LT  +       
Sbjct: 115 GSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSV------- 167

Query: 218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR 277
             ++ YA   R                     ++ PG   TP V K+           + 
Sbjct: 168 -AID-YAPKIRCN-------------------AVCPGTIMTPMVIKAAKMEVGEDENAVE 206

Query: 278 ----------------TSEEGADTVLWLA 290
                             EE A+ V +LA
Sbjct: 207 RKIEEWGRQHPMGRIGRPEEVAEVVAFLA 235

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 81.6 bits (202), Expect = 8e-18
 Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 28/245 (11%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE---NVHL 116
           +G+  +VTG   GIG A  + L   G+ V +  R  E+ ++A   +++         V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
             C++ +  E+ +           ++ LVNN G    +    I+S+G+      N+ GT+
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            + +++     K      ++ +                 +G           +     LT
Sbjct: 137 YMCKAVYSSWMK-EHGGSIVNIIVPTK------------AGFP-LAVHSGAARAGVYNLT 182

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR---------TSEEGADT 285
           +  +  +   GI    + PG   +    ++  S+ + F                EE +  
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSV 242

Query: 286 VLWLA 290
           V +L 
Sbjct: 243 VCFLL 247

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGN-E 112
           + ++GK  +VTGA+ GIG A A+ LA+ GA V   Y     KE+ E  +  I+S  G+  
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHY--GNRKEEAEETVYEIQSNGGSAF 60

Query: 113 NVHLELCDLSSITE-IKSFANRFSLKNKP--VHVLVNNAGVLENNRL--ITSEGFELNFA 167
           ++   L  L  +     S  N    +       +L+NNAG+     +   T + F+   +
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSG 199
           VN    + I +  +  L      +R+I +SS 
Sbjct: 121 VNAKAPFFIIQQALSRLRDN---SRIINISSA 149

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 80.4 bits (199), Expect = 1e-17
 Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 5/142 (3%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLEL 118
           +GK  VVTG+ +GIG   A  LA++GA + +       + E   + + ++ G + ++   
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG- 61

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTI 176
            DLS    ++   +    +   + +LVNNAG+     +    +E ++   A+N+   +  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 177 TESMVPLLEKAAPDARVITVSS 198
           T + +P + K     R+I ++S
Sbjct: 122 TAAALPHM-KKQGFGRIINIAS 142

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 80.7 bits (200), Expect = 1e-17
 Identities = 47/256 (18%), Positives = 86/256 (33%), Gaps = 44/256 (17%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++ G+  ++TG  +G+G A  +   + GA V ++ +S E+      A        N    
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGV 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI-------TSEGFELNFAVNV 170
           + D+ S+ + K  A R       +  L+ NAG+ + +  +           F+  F VNV
Sbjct: 57  VGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNV 116

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
            G     ++ +P L  +     V+   S  G Y                G   Y   K  
Sbjct: 117 KGYIHAVKACLPALVSSR--GSVVFTISNAGFYPNG-------------GGPLYTATKHA 161

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR------------ 277
            V L  + +       +    + PG   T     S    +E+   ++             
Sbjct: 162 VVGLVRQMAFELA-PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG 220

Query: 278 ---TSEEGADTVLWLA 290
                EE     ++ A
Sbjct: 221 RMPALEEYTGAYVFFA 236

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 79.9 bits (198), Expect = 1e-17
 Identities = 49/242 (20%), Positives = 85/242 (35%), Gaps = 30/242 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKEKGETALSAIRSKTGNENV 114
              ++TGA  GIG A A   A            + +  R+    E      R++      
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LT 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
                D+S + +++        +   +  LVNNAGV     L   T E F+     N+ G
Sbjct: 61  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKG 120

Query: 173 TYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           T+ +T+++  L+E+      +  ++S                   F     Y  +K  Q 
Sbjct: 121 TFFLTQALFALMERQH-SGHIFFITSVAATKA-------------FRHSSIYCMSKFGQR 166

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL 291
            L E      ++  +    + PG   TP   K     ++     +   E+ A  V+   L
Sbjct: 167 GLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----DDEMQALMMMPEDIAAPVVQAYL 222

Query: 292 QP 293
           QP
Sbjct: 223 QP 224

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 79.8 bits (198), Expect = 2e-17
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M  R++ K  V+TG   GIG A AE  A  GA +            A +AIR+      V
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADI--AIADLVPAPEAEAAIRNLGR--RV 56

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
               CD+S   ++++F  +         +LVNNAG+        +T E ++  F +NV  
Sbjct: 57  LTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDS 116

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
            + + ++ VP +++     R+I ++S
Sbjct: 117 GFLMAKAFVPGMKRNG-WGRIINLTS 141

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 6/158 (3%)

Query: 44  KEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS 103
             HS    P         +   VTG ++GIG A A  LA+RG  VY   R  +    A+ 
Sbjct: 8   HHHSSGLVPRGSH-MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVD 66

Query: 104 AIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEG 161
            +R+     +V    CD++S  E+ +       +  P+ +LVN+AG         +    
Sbjct: 67  GLRAAGH--DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDAL 124

Query: 162 FELNFAVNVLGTYTITESMVPLLE-KAAPDARVITVSS 198
           +      N+ G + +T  ++     + A   R++ ++S
Sbjct: 125 WADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAS 162

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 79.5 bits (197), Expect = 2e-17
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTGA  GIG A A  LA+ GATV +   + E  + A ++I      +     
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAI 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             D+S    +K+           + +LVNNA ++          + +     VN+ GT+ 
Sbjct: 58  AADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFI 117

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +T +    +  A    RVI+++S
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIAS 140

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 79.6 bits (197), Expect = 2e-17
 Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 41/254 (16%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           + EG + +V+G   G+G AT   L + G  V +   + EKG+     +            
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFV 81

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG-------FELNFAVNV 170
             +++S   + +     +   +  + +V + G     R++  +G       F     + +
Sbjct: 82  STNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141

Query: 171 LGTYTITESMVPLLEKAAPDA-----RVITVSSGGMYTAHLTDDLEFNSGSFDG-MEQ-- 222
            GTY +   +   +  A P        ++  +S                  ++G + Q  
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTAS---------------IAGYEGQIGQTA 186

Query: 223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER------FAGNL 276
           YA  K   + LT   +      GI   ++ PG  +TP +         +      F   L
Sbjct: 187 YAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRL 246

Query: 277 RTSEEGADTVLWLA 290
            T +E AD   +L 
Sbjct: 247 GTPDEFADAAAFLL 260

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 20/163 (12%)

Query: 49  NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK 108
           +         ++G   V+TG  +G+G ATAE L  +GA+  ++      GE     +   
Sbjct: 2   HMAAACRS--VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--- 56

Query: 109 TGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--------TSE 160
               N      D++S  ++++       K   V V VN AG+   ++          T E
Sbjct: 57  --GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLE 114

Query: 161 GFELNFAVNVLGTYTITESMVPLLEKAAPDA-----RVITVSS 198
            F+    VN++GT+ +   +   + +  PD       +I  +S
Sbjct: 115 DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 79.1 bits (196), Expect = 4e-17
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++GK   VTG++ GIG+A AE  A  GA V +   S    E A    +   G       
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK-TYGVH-SKAY 88

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI----TSEGFELNFAVNVLGT 173
            C++S    ++   ++       + V V NAGV             + +    +V++ G 
Sbjct: 89  KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 174 Y 174
           Y
Sbjct: 149 Y 149

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 78.7 bits (195), Expect = 4e-17
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 10/144 (6%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGNENVHL 116
           + K  +VTG++ G+G A A  LA  G  +   Y   RSK+        I        V +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINY--ARSKKAALETAEEIEKLGV--KVLV 58

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
              ++    +IK    +       + V VNNA       +  +    ++    +N     
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALL 118

Query: 175 TITESMVPLLEKAAPDARVITVSS 198
              +    L+EK      ++++SS
Sbjct: 119 FCAQEAAKLMEKNGG-GHIVSISS 141

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSAIRSKTGN-E 112
           A +EGK  +VTGA  GIG   A  L  RG  V   Y    S E  E  ++AI+    +  
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEEVVAAIKKNGSDAA 82

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNV 170
            V     ++  + +I             + ++ +N+GV+    +  +T E F+  F +N 
Sbjct: 83  CVK---ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINT 139

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSS 198
            G + +       LE      R+I + S
Sbjct: 140 RGQFFVAREAYKHLEIG---GRLILMGS 164

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 78.3 bits (194), Expect = 6e-17
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTGA  GIG A A  L   G  V +   +    +   S I    G   V ++  D+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVK-VDV 60

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITES 179
           S   ++ +   +         V+VNNAGV  +  +  IT E  +  + +NV G     ++
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQA 120

Query: 180 MVPLLEKAAPDARVITVSS 198
            V   +K     ++I   S
Sbjct: 121 AVEAFKKEGHGGKIINACS 139

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 77.9 bits (193), Expect = 8e-17
 Identities = 55/247 (22%), Positives = 81/247 (32%), Gaps = 36/247 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              GK  +VTG   GIG A A+  A  GA V +     E  E A  AI            
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-EAIGGAF----FQ-- 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             DL    E   F    +     V VLVNNA +        +    +     VN+     
Sbjct: 56  -VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMH 114

Query: 176 ITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
           ++      + K      ++ V+S  G++                    Y  +K   V LT
Sbjct: 115 LSALAAREMRKVG-GGAIVNVASVQGLF------------AEQ-ENAAYNASKGGLVNLT 160

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF--NERFAGNLR---------TSEEGA 283
              +       I   ++ PG   T  V +++      ER   +             EE A
Sbjct: 161 RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVA 220

Query: 284 DTVLWLA 290
           + VL+LA
Sbjct: 221 EAVLFLA 227

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 77.6 bits (192), Expect = 8e-17
 Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 29/236 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              V+TGA++G+G   A+   + G   Y+  RS+ K    LS + +     NV     DL
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK----LSTVTNCLS-NNVGYRARDL 56

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTITES 179
           +S  E++    +    +     +V++AG      L     E  +     N+     +   
Sbjct: 57  ASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRE 113

Query: 180 MVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
           +V   +       V+ + S                         Y   K     L E   
Sbjct: 114 LVKRYKDQP--VNVVMIMSTAAQQP-------------KAQESTYCAVKWAVKGLIESVR 158

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
              K K +   +++PG   T     S  S +        ++E+ A  +        
Sbjct: 159 LELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSF---MSAEDAALMIHGALANIG 211

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 77.5 bits (192), Expect = 1e-16
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+ +++GK  +VTG+  GIG A AE LAS G+TV +   S E+ +     I +K G    
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKA 59

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
           H    +L S   I             + +LVNNAG+  +   +  +   +E    VN+ G
Sbjct: 60  HGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTG 119

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
           T+ +T++ +  + K     R++ +SS
Sbjct: 120 TFLVTQNSLRKMIKQR-WGRIVNISS 144

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 77.2 bits (191), Expect = 1e-16
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++G    VTGA +GIG       A+ GA + ++ R     + A   + +          
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV----AARI 63

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTY 174
           + D++    + + A        PV +LVN+AG+   +  +      +    AVNV G +
Sbjct: 64  VADVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMF 121

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 46  HSKNFKPE-DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA 104
           HS    P     A  + +  +VTGA +GIG   A  L   G  V++  R +E   T L  
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 105 IRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
           +R            CD+ S+ EI++       +  PV VLVNNAG         +  E +
Sbjct: 66  LREAGV--EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELW 123

Query: 163 ELNFAVNVLGTYTITESMVPLLE-KAAPDARVITVSS 198
                 N+ G + +T+ ++           R++ ++S
Sbjct: 124 LDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 160

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 40  KNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE 99
           K  F       K E+     E K  +VTGA  GIG   A+ LA   + V  + R+++  +
Sbjct: 23  KLEFMNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD 82

Query: 100 TALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI-- 157
           + +  I+S            D+S   EI    N+   ++K V +LVNNAG+  +N  +  
Sbjct: 83  SVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRM 140

Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            ++ +E     N+   + IT+ +   +       R+I +SS
Sbjct: 141 KNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISS 180

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 5/154 (3%)

Query: 47  SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR 106
           ++   P  M   ++ +  +VTGA+ GIG A A  LA RGA V     ++   E   +A +
Sbjct: 14  AQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK 73

Query: 107 SKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFEL 164
                      + +++  T + +       +   ++VLVNNAG+ ++   +    + ++ 
Sbjct: 74  QAGL--EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDA 131

Query: 165 NFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
               N+   + ++ +++  + KA    R++ ++S
Sbjct: 132 VIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITS 164

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 76.8 bits (190), Expect = 2e-16
 Identities = 46/255 (18%), Positives = 90/255 (35%), Gaps = 51/255 (20%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
           + +  K  +VTGA+ GIG A AE     G+ V  +             I           
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD-HIE---------- 52

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTY 174
             CD+++  ++K+  +    +   + VLVNNAG+    ++  ++   +     VN+ G Y
Sbjct: 53  --CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY 110

Query: 175 TITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
             ++  +P + ++  D  ++ +SS                         Y  +K   + L
Sbjct: 111 YASKFAIPYMIRSR-DPSIVNISSVQASI-------------ITKNASAYVTSKHAVIGL 156

Query: 234 TEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR-------------- 277
           T+  +    +    +   ++ P   +TP V K+           +               
Sbjct: 157 TKSIA---LDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQR 213

Query: 278 --TSEEGADTVLWLA 290
               +E A  V +LA
Sbjct: 214 IGKPQEVASAVAFLA 228

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 6/142 (4%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMV--CRSKEKGETALSAIRSKTGNENVHLEL 118
            K  +VTG   GIG   +E LA+ G  + +    + +E+    +  I +    + V +  
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVG- 59

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
            D++      S  +  + K     VLVNNAG+ +   L  +T E  +  ++VNV   +  
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFG 119

Query: 177 TESMVPLLEKAAPDARVITVSS 198
            ++     ++     ++I  +S
Sbjct: 120 IQAASRKFDELGVKGKIINAAS 141

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 15/160 (9%)

Query: 41  NGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET 100
           +G    ++N   + M  R + K  V+TGA+ GIG         R   V    RS +    
Sbjct: 9   SGVDLGTENLYFQSMM-RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA- 66

Query: 101 ALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--T 158
                     + ++H    D+S              +   +  LVNNAGV      +  T
Sbjct: 67  ----------DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMT 116

Query: 159 SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            E ++ N  VNV G + IT+     + K      ++++++
Sbjct: 117 QEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITT 155

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 50/248 (20%), Positives = 89/248 (35%), Gaps = 35/248 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  +VTG  +G+G    + L   GA V     ++  G+   + +      E     
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFV 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D+SS  +          +   ++VLVNNAG+L    +     E F     +N    + 
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFI 117

Query: 176 ITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
             +  +  +++      +I ++S                         Y+ +K    ALT
Sbjct: 118 GCQQGIAAMKETG--GSIINMASVSSWLPIE-------------QYAGYSASKAAVSALT 162

Query: 235 EKWSEMYKEKGIGFY--SMHPGWAETPGVAKSMPSFNERFA----------GNLRTSEEG 282
              +   +++G      S+HP    TP +  S+P    +            G     E  
Sbjct: 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERI 222

Query: 283 ADTVLWLA 290
           A  VL+LA
Sbjct: 223 AQLVLFLA 230

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTGA +GIG A  +  A  GA++  V R +     A++A+ ++         
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-----AIAV 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
           + D+S    +++       +   +H + + AGV  +        E +E    VN+ G++ 
Sbjct: 58  VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           +      +LE+      ++   S
Sbjct: 118 VARKAGEVLEEG---GSLVLTGS 137

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 76.2 bits (188), Expect = 3e-16
 Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 48/250 (19%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           V++G   GIG AT + L + G  +  +     +                      DLS+ 
Sbjct: 5   VISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------------ADLSTA 45

Query: 125 TEIK-SFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPL 183
              K + A+  +  +K +  LV  AG+        ++      +VN  G   + ++ +P 
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLG-----PQTKVLGNVVSVNYFGATELMDAFLPA 100

Query: 184 LEKAAPDARVITVSSGGMYTAHLTDDLEFNS---------------GSFDGMEQYARNKR 228
           L+K    A V+  S    + A   + L                   G   G   YA +K 
Sbjct: 101 LKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKN 160

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFAGNLR------TSE 280
                  K +  + E G+   ++ PG  ETP +   +  P + E  A  +          
Sbjct: 161 ALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPS 220

Query: 281 EGADTVLWLA 290
           E A  + +L 
Sbjct: 221 EMASVIAFLM 230

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 76.1 bits (188), Expect = 5e-16
 Identities = 27/168 (16%), Positives = 48/168 (28%), Gaps = 23/168 (13%)

Query: 53  EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGN 111
           E      E    V+TG    IG++ A  L  +G  V +  R S+   +  ++ + +    
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNK----PVHVLVNNAGVLENNRL----------- 156
             V  +  DLS  + +          +        VLVNNA       L           
Sbjct: 63  SAVLCK-GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD 121

Query: 157 --ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA----RVITVSS 198
                      F  N +    +  +      +          V+ +  
Sbjct: 122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 75.7 bits (187), Expect = 6e-16
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + G+  VVTGA +GIG A A G A  GA V    R+    E A   I    G  +    
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVA-DEIADGGG--SAEAV 84

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
           + DL+ +    + A   +   + V VLVNNAG++        +   +     VN+   + 
Sbjct: 85  VADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWV 143

Query: 176 ITESMVPLLEKAAPDARVITVSS-----GGM----YTA 204
           ++ S    +  A    R++T++S     GG     Y A
Sbjct: 144 LSRSFGTAM-LAHGSGRIVTIASMLSFQGGRNVAAYAA 180

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 73.8 bits (182), Expect = 8e-16
 Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 29/140 (20%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
               ++ GA+  +G A  E L  + A V    R           +              D
Sbjct: 3   AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------DVT------------VD 42

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           +++I  IK    +       V  +V+  G    + L  +T E   +  +  + G   +  
Sbjct: 43  ITNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVL 98

Query: 179 SMVPLLEKAAPDARVITVSS 198
             +  L            + 
Sbjct: 99  LGIDSL---NDKGSFTLTTG 115

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P D    ++GK  VVTGA  GIG   AE  A  GATV  V    +     L  +  K G 
Sbjct: 204 PADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATV--VAIDVDGAAEDLKRVADKVGG 261

Query: 112 ENVHLELCDLSSITE-IKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAV 168
             + L++    ++ +               V +LVNNAG+  +  L     + ++   AV
Sbjct: 262 TALTLDVTADDAVDKITAHVTEHHG---GKVDILVNNAGITRDKLLANMDEKRWDAVIAV 318

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSS 198
           N+L    +TE +V          RVI +SS
Sbjct: 319 NLLAPQRLTEGLVGNGTI-GEGGRVIGLSS 347

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 74.5 bits (184), Expect = 1e-15
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             K  +VTGA+ GIG+  A  LAS+GATV     S+   E   ++++ K         + 
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF--KARGLVL 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           ++S I  I++F      +N  + +LVNNAG+
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 74.5 bits (184), Expect = 2e-15
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 58  RIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENV 114
            ++GK  VVTGA+   G+G   A G A  GA V +      +  E  +  +    G +  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
             + C + S    +            +   + NAG   ++ ++  + E +     V++ G
Sbjct: 77  AYK-CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135

Query: 173 TY 174
           T+
Sbjct: 136 TF 137

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 12/141 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
            GK  ++TGA++GIG A A  L   G+ V +   ++EK ++  +A+      +N  +E+C
Sbjct: 13  TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVC 67

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           +L++  E  +  ++ S     + +LV NAG+  +   I    + F+    +N+   + + 
Sbjct: 68  NLANKEECSNLISKTS----NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILN 123

Query: 178 ESMVPLLEKAAPDARVITVSS 198
              +  + +     R+I +SS
Sbjct: 124 REAIKKMIQKR-YGRIINISS 143

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 35/249 (14%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  +VTG+ +GIG   A+ LA  GA + +             A  ++ G + VH    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA---PALAEIARHGVKAVHHP-A 58

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           DLS + +I++       +   V +LVNNAG+     +     E ++   A+N+   +  T
Sbjct: 59  DLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
              +P + +A    R+I ++S                    G   Y   K   V LT+  
Sbjct: 119 RLALPGM-RARNWGRIINIASVHGLVG------------STGKAAYVAAKHGVVGLTKVV 165

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF----------------AGNLRTSEE 281
                   +   ++ PGW  TP V K +                       +    T E 
Sbjct: 166 GLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEH 225

Query: 282 GADTVLWLA 290
             + VL+L 
Sbjct: 226 LGELVLFLC 234

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ K  ++TGA  GIG AT E  A  GA +      +     A  A+ +          
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV------- 54

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
           + D++    ++            +  +V+ AG+  +N       E +EL   VN+ G++ 
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
           + ++    + +  P   ++  +S
Sbjct: 115 VAKAASEAMREKNP-GSIVLTAS 136

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 73.7 bits (182), Expect = 3e-15
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 48  KNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           +   P  M  ++ G+  +VTGA  GIG A A    ++GA V +    ++K +   + +  
Sbjct: 15  QTQGPGSMF-KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-- 71

Query: 108 KTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELN 165
               ++V +   +LS    IK  A     + + + +LVNNAG+  +   +    + ++  
Sbjct: 72  ---GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDV 128

Query: 166 FAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
            AVN+    T+T  ++  + +     R+I ++S
Sbjct: 129 LAVNLTAASTLTRELIHSMMRRR-YGRIINITS 160

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 73.7 bits (182), Expect = 4e-15
 Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 35/248 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG---ETALSAIRSKTGNENV 114
           R++ +  +VTG ++GIG A A   A  GA V +     E+    +   + I         
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVK-ALIEECGR--KA 102

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVL 171
            L   DLS  +  +S  ++       + +L   AG          +TSE F+  FAVNV 
Sbjct: 103 VLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRV 229
             + IT+  +PLL      A +IT SS   Y  + HL D              YA  K  
Sbjct: 163 ALFWITQEAIPLLP---KGASIITTSSIQAYQPSPHLLD--------------YAATKAA 205

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPG-VAKSMPS-FNERFAGNL---R--TSEEG 282
            +  +   ++   EKGI    + PG   T   ++         +F       R     E 
Sbjct: 206 ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAEL 265

Query: 283 ADTVLWLA 290
           A   ++LA
Sbjct: 266 APVYVYLA 273

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 72.5 bits (179), Expect = 6e-15
 Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 4/143 (2%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++GK  +VTG++ G+G A A  L + GA + +          A +      G   V + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN-VVVA 60

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
             D+ +  ++++           + +LVNNAG+  +  ++  + + ++     N+   Y 
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120

Query: 176 ITESMVPLLEKAAPDARVITVSS 198
            T+++  ++ K     ++I ++S
Sbjct: 121 CTKAVSKIMLKQK-SGKIINITS 142

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M      ++ ++T    G+G    E L ++G +V +   S       +           +
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER-L 59

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG 149
                D++   ++             +  L+NNAG
Sbjct: 60  QFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 72.1 bits (178), Expect = 7e-15
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EGK  +VTGA+ GIG A AE LA RGA V     S+   +     +      +N      
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMAL 62

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           ++++   I++     + +   V +LVNNAG+  +N L+    E +      N+   + ++
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLS 122

Query: 178 ESMVPLLEKAAPDARVITVSS 198
           ++++  + K     R+I V S
Sbjct: 123 KAVLRGMMKKR-QGRIINVGS 142

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 72.2 bits (178), Expect = 8e-15
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 20/146 (13%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  I  K  +V  A+ GIG A A+ L+  GA V +  R++E  + +             
Sbjct: 13  MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------GH 61

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLG 172
              +CDL    ++     +     K V +LV NAG  +       T+E F+       L 
Sbjct: 62  RYVVCDLR--KDLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLN 115

Query: 173 TYTITESMVPLLEKAAPDARVITVSS 198
              I  + +P +++     R++ ++S
Sbjct: 116 MIKIVRNYLPAMKEKG-WGRIVAITS 140

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 52/277 (18%), Positives = 90/277 (32%), Gaps = 51/277 (18%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV-------------YMVCRSKEKG 98
           P  M  R++ K  +VTG   G G + A  LA  GA +             Y +  S++  
Sbjct: 2   PGSM-GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLE 60

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENN 154
           E     +  KTG +    E  D+     +          F      + V+V NAG+    
Sbjct: 61  EAG-LEVE-KTGRKAYTAE-VDVRDRAAVSRELANAVAEFG----KLDVVVANAGICPLG 113

Query: 155 RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFN 213
             +  + F   F V+ +G      + +P L      A +IT  S  G+  A         
Sbjct: 114 AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG---ASIITTGSVAGLIAA--AQPPGAG 168

Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
                G   Y+  K++  + T + +     + I    +HP    T  +  +      R  
Sbjct: 169 GPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPD 228

Query: 274 GNLRTSEEG--------------------ADTVLWLA 290
               +  +                     ++ V +LA
Sbjct: 229 LEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLA 265

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 71.4 bits (176), Expect = 2e-14
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 16/159 (10%)

Query: 42  GFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA 101
           G   H  +     +      ++ +VTG N GIG A A   A  G  V +  RS E  E  
Sbjct: 2   GSSHHHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF 61

Query: 102 LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TS 159
           L+               CD++   +++         + PV VL+ NAGV ++  L+  + 
Sbjct: 62  LAVK-------------CDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSE 108

Query: 160 EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS 198
           E F      N+ GT+ + +     + +A    RV+ +SS
Sbjct: 109 EDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISS 146

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 71.2 bits (175), Expect = 3e-14
 Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 40/178 (22%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLEL 118
                +VTGA   +G + AEGL + G  V +    S  +     + + ++  N  + ++ 
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ- 66

Query: 119 CDLSSITEIKSFANRFSLKNK-----------------PVHVLVNNAGVLENNRL--ITS 159
            DLS++          S                        VLVNNA       L     
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 160 EGFELN--------------FAVNVLGTYTITESMVPLLEKAAPDA-----RVITVSS 198
           +G E                F  N +  Y + ++    +             +I +  
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 40/178 (22%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLEL 118
                +VTGA   +G + AEGL + G  V +    S  +     + + ++  N  + ++ 
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ- 103

Query: 119 CDLSSITEIKSFANRFSLKNK-----------------PVHVLVNNAGVLENNRL--ITS 159
            DLS++          S                        VLVNNA       L     
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 160 EGFELN--------------FAVNVLGTYTITESMVPLLEKAAPDA-----RVITVSS 198
           +G E                F  N +  Y + ++    +             +I +  
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 54/278 (19%), Positives = 89/278 (32%), Gaps = 62/278 (22%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-------------CRSKEKG 98
           P  M  ++EG+   +TGA  G G A A  +A+ GA +  V               S +  
Sbjct: 2   PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL 61

Query: 99  ETALSAIRSKTGNENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENN 154
              +  +        +   + D      ++                + ++V NAGV    
Sbjct: 62  SETVRLVE-AANRR-IVAAVVDTRDFDRLRKVVDDGVAALG----RLDIIVANAGVAAPQ 115

Query: 155 RL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-----GGMYTAHLT 207
               IT E F     +NV GT+    +  P + +      +I +SS        +  H  
Sbjct: 116 AWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIH-- 173

Query: 208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS 267
                          Y  +K     L   ++    +  I   S+HPG   TP  +  M +
Sbjct: 174 ---------------YTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVT 218

Query: 268 FNERFA---------------GNLRTSEEGADTVLWLA 290
              +                   +   E+ ADTV WLA
Sbjct: 219 AVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLA 256

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 70.2 bits (173), Expect = 4e-14
 Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 3/139 (2%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +  ++TGA+ GIG A A  LA  G  + +      +    ++    + G+  V +   +L
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITES 179
                  +  ++ +     +  LVNNAG+  +  L+    E +E     N+   +  T  
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121

Query: 180 MVPLLEKAAPDARVITVSS 198
            V L+ KA    R++ ++S
Sbjct: 122 AVKLMMKAR-FGRIVNITS 139

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 70.3 bits (173), Expect = 4e-14
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 16/149 (10%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
            E  +     ++ +VTG N GIG A A+ LA+ G  V +  R     +            
Sbjct: 6   TEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVE------ 59

Query: 112 ENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVN 169
                   D++    +            PV VLV+NAG+  +  L+  T E FE     N
Sbjct: 60  -------VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINAN 112

Query: 170 VLGTYTITESMVPLLEKAAPDARVITVSS 198
           + G + + +     +++     R+I + S
Sbjct: 113 LTGAFRVAQRASRSMQRNK-FGRMIFIGS 140

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 70.2 bits (173), Expect = 4e-14
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 1/91 (1%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             +   VTG   GIG +  + L   G  V   C             +   G +  +    
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD-FYASEG 70

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           ++      K   ++   +   + VLVNNAG+
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 69.9 bits (172), Expect = 5e-14
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             +  +VTGA+ GIG A A  LA+ GA V +   S       + A  +  G E       
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE-AFAVKA 85

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           D+S  +E+++       +   + VLVNNAG+  +  L+    + ++    +N+ G +  +
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145

Query: 178 ESMVPLLEKAAPDARVITVSS 198
            +   ++ K     R+I ++S
Sbjct: 146 RAAAKIMLKQR-SGRIINIAS 165

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 70.4 bits (173), Expect = 6e-14
 Identities = 33/176 (18%), Positives = 52/176 (29%), Gaps = 25/176 (14%)

Query: 45  EHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALS 103
            HS    P    + +E    VVTGA   IG A A  L   G  V +    S E   +   
Sbjct: 9   HHSSGLVPR--GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLAD 66

Query: 104 AIRSKTGNENVHLELCDLSSITEIKSFANRF--SLKNK--PVHVLVNNAGVLENNRL--- 156
            +  +  N    +   DL++   + +       S         VLVNNA       L   
Sbjct: 67  ELNKERSNT-AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQG 125

Query: 157 ---------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA-----RVITVSS 198
                                N +  + +T S     +   P+       ++ +  
Sbjct: 126 DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 69.6 bits (171), Expect = 6e-14
 Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 22/154 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            I     VVTG  +G+G AT + L   GA V ++    E     L         +     
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL--------GDRARFA 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG------FELNFAVNVL 171
             D++    + S A   +     + ++VN AG     R+++ +G      F     +N++
Sbjct: 58  AADVTDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLV 116

Query: 172 GTYTITESMVPLLEKAAPDA-------RVITVSS 198
           G++ +       + K  P          +I  +S
Sbjct: 117 GSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS 150

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 69.9 bits (172), Expect = 7e-14
 Identities = 67/277 (24%), Positives = 104/277 (37%), Gaps = 57/277 (20%)

Query: 52  PEDMQA----RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-------------CRS 94
           P  M A     ++G+   +TGA  G G + A  LA+ GA +                  S
Sbjct: 2   PGSMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPAS 61

Query: 95  KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN----RFSLKNKPVHVLVNNAGV 150
            E  +     +    G + +     D+     ++        +F      + V+V NAGV
Sbjct: 62  PEDLDETARLVE-DQGRKALTRV-LDVRDDAALRELVADGMEQFG----RLDVVVANAGV 115

Query: 151 LENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLT 207
           L   R+  +T E ++    VN+ GT+    + VP + +A     ++ VSS  G+      
Sbjct: 116 LSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK----- 170

Query: 208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP-------- 259
                   +  G   Y+ +K    ALT   +    E GI   S+HP   ETP        
Sbjct: 171 -------ATP-GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMM 222

Query: 260 GVAKSMPSFNERFA------GNLRTSEEGADTVLWLA 290
            +    PSF   F           T++E AD V WLA
Sbjct: 223 EIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLA 259

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 69.0 bits (170), Expect = 8e-14
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  +VTGA+ GIG A A  LA +GA V +     E+    +     K G  +      
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRA 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           D+++  ++ +   +       V +LVNNAGV ++N L+    E ++     N+ G +  T
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCT 121

Query: 178 ESMVPLLEKAAPDARVITVSS 198
           +++   + +     R++ ++S
Sbjct: 122 KAVSRFMMRQR-HGRIVNIAS 141

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 69.5 bits (171), Expect = 9e-14
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 1/91 (1%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             +   VTG   G+G A +  L   G  V +    +    +         G  +      
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG-RDFKAYAV 82

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGV 150
           D++     +  A +       V VL+NNAG+
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGI 113

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 69.5 bits (171), Expect = 9e-14
 Identities = 51/269 (18%), Positives = 87/269 (32%), Gaps = 45/269 (16%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P   +  + GK   +TGA  G G A A  LA+ GA +  V    +           +   
Sbjct: 4   PRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELA 63

Query: 112 ENVHL----------ELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVLENNRL- 156
             V L             D+     + +      +        + ++V NAG+     + 
Sbjct: 64  ATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELG----RLDIVVANAGIA---PMS 116

Query: 157 ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS 216
              +G+     VN+ G Y   +  +P L K      ++ +SS    +A L      +   
Sbjct: 117 AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS----SAGLAGVGSADP-- 170

Query: 217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP---------------GV 261
             G   Y   K   V L   ++ +   + I   S+HP   ETP                 
Sbjct: 171 --GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA 228

Query: 262 AKSMPSFNERFAGNLRTSEEGADTVLWLA 290
             +  +        +   E+ A+ V WL 
Sbjct: 229 TDTPGAMGNAMPVEVLAPEDVANAVAWLV 257

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 68.7 bits (169), Expect = 1e-13
 Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 4/141 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             K+ +VTGA+ GIG + A  LA  G  V +     ++   A+       G +       
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD-SFAIQA 61

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
           +++   E+K+       +   + VLVNNAG+  +N L+    + ++     N+ G +   
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCI 121

Query: 178 ESMVPLLEKAAPDARVITVSS 198
           +   P + +      +I +SS
Sbjct: 122 QKATPQMLRQR-SGAIINLSS 141

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 24/161 (14%)

Query: 62  KNCVVTGANAGIGYATAEGLAS---RGATVYMVCRSKEKGET-ALSAIRSKTGNENVHLE 117
              ++TG ++GIG   A  LAS   +   VY   R  +       +A        ++   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVLG 172
             D+     + +   R  +    V VLV NAG+     LE    +  +       VNV+G
Sbjct: 63  QLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEA---LGEDAVASVLDVNVVG 117

Query: 173 TYTITESMVPLLEKAAPDARVITVSS---------GGMYTA 204
           T  + ++ +P + K     RV+   S           +Y A
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCA 157

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 67.9 bits (167), Expect = 2e-13
 Identities = 42/246 (17%), Positives = 69/246 (28%), Gaps = 40/246 (16%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              +VT A    G A  E L   G TV     S               G           
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG--------TIA 53

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-----ITSEGFELNFAVNVLGTYTI 176
            +  + +   +      + +  +V+N  +            +       F    +    +
Sbjct: 54  LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILL 113

Query: 177 TESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            +S +  L   A  A VI ++S  G    A                  Y   +   VAL 
Sbjct: 114 LQSAIAPLRA-AGGASVIFITSSVGKKPLA--------------YNPLYGPARAATVALV 158

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAK-----SMPSFNERFA-----GNLRTSEEGAD 284
           E  ++     GI  Y++ P +   P         + P   ER       G L   +E   
Sbjct: 159 ESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGA 218

Query: 285 TVLWLA 290
            + +LA
Sbjct: 219 LITFLA 224

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 69.0 bits (169), Expect = 2e-13
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 12/149 (8%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS---AIRSKTGNENVHL 116
             K  ++TGA++G G  TAE LA  G  VY   R       +     A  ++  + ++  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV-----LENNRLITSEGFELNFAVNVL 171
              D+ S   +    ++   ++  + VL++NAG       E     T E F   + +NVL
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA---FTPEQFAELYDINVL 120

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGG 200
            T  +  + +P + +      +I +SS  
Sbjct: 121 STQRVNRAALPHM-RRQKHGLLIWISSSS 148

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 68.0 bits (166), Expect = 4e-13
 Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 16/159 (10%)

Query: 53  EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE 112
           +     ++GK  VV      +G  +A  LA  GA V +  R  +K + A  ++  +    
Sbjct: 111 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN 170

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAG----VLENNRLITSEGFELNFAV 168
               E  D +S  E            K  H +         +L           E+    
Sbjct: 171 VTAAETADDASRAEA----------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADY 220

Query: 169 NVLGTYTITESMVPLLEKAAPDARVI-TVSSGGM-YTAH 205
           N      I         K     R    +  GG+    H
Sbjct: 221 NAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLH 259

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 23/214 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++GKN ++TG ++GIG A +   A  GA + +    +E           K G + V L 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTY 174
             DLS     K        +   +++LVNN       +    IT+E  E  F +N+   +
Sbjct: 104 -GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF 162

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMY--TAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +T++ +  L++      +I  +S   Y     L D              Y+  K   VA
Sbjct: 163 HVTKAALSHLKQG---DVIINTASIVAYEGNETLID--------------YSATKGAIVA 205

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
            T   S+   +KGI    + PG   TP +  S  
Sbjct: 206 FTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD 239

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 66.3 bits (163), Expect = 8e-13
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 13/118 (11%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +  +VTG + GIG A AE L +RG  V +  R+ E+   +L A+              DL
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLP----------TDL 52

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTIT 177
               + K    R       +HVLV+ A V      +  + E +     +++   + + 
Sbjct: 53  EK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLA 109

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 66.1 bits (162), Expect = 1e-12
 Identities = 49/248 (19%), Positives = 76/248 (30%), Gaps = 46/248 (18%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
            +TG+ +GIG A  E LA  G TV  + R +   E  LS    +       L+ C     
Sbjct: 5   AITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCG---- 60

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLL 184
                           +  LV  AGV      +T+    L  AVN  G   + + +   L
Sbjct: 61  --------------GVLDGLVCCAGV-----GVTAANSGLVVAVNYFGVSALLDGLAEAL 101

Query: 185 EKAAPDARVITVSSGGMYT---AHLTDDLEFNSGSFD-----------GMEQYARNKRVQ 230
            +       + V S        A L       +G                  YA +K   
Sbjct: 102 SRGQQP-AAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAV 160

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLR--------TSEEG 282
             L  +    +  +G+    + PG  ETP +  S        +               E 
Sbjct: 161 TCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREV 220

Query: 283 ADTVLWLA 290
           A+ + +L 
Sbjct: 221 AEAIAFLL 228

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 65.2 bits (160), Expect = 2e-12
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              VVTGA+ GIG A A  L   G  V +      K    +S      G +       D+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-AITFGGDV 60

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITES 179
           S   ++++           + V+VNNAG+  +  LI      ++    +N+ G +  T++
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 180 MVPLLEKAAPDARVITVSS 198
              ++ K     R+I ++S
Sbjct: 121 ATKIMMKKR-KGRIINIAS 138

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 53/279 (18%), Positives = 96/279 (34%), Gaps = 39/279 (13%)

Query: 34  GYMNFTKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-- 91
           G M          S   +   M  R++GK   +TGA  G G   A  LA  GA +  +  
Sbjct: 20  GSMVDPVRRSTRVSARGQGARMN-RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDL 78

Query: 92  CR----------SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV 141
           CR          S E+ +  +  +  + G   +  +  D+  +  +++  +    +   +
Sbjct: 79  CRQQPNLDYAQGSPEELKETVRLVE-EQGRRIIARQ-ADVRDLASLQAVVDEALAEFGHI 136

Query: 142 HVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS- 198
            +LV+N G+     +  +T + +      N++G +    +++P + +      VI VSS 
Sbjct: 137 DILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST 196

Query: 199 ----GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPG 254
               G    +H                 YA +K     L    +       I   S++PG
Sbjct: 197 VGLRGAPGQSH-----------------YAASKHGVQGLMLSLANEVGRHNIRVNSVNPG 239

Query: 255 WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP 293
              T                   T E+ A+    L L P
Sbjct: 240 AVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 42/260 (16%), Positives = 80/260 (30%), Gaps = 35/260 (13%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN 111
           P  M  ++EGK   +TGA  G G + A  LA  GA +  +   K+     L         
Sbjct: 19  PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLA 78

Query: 112 ENVHL----------ELCDLSSITEIKSFAN----RFSLKNKPVHVLVNNAGVLENNRL- 156
           E V               D+     +++  +    +       + +++ NA +       
Sbjct: 79  ETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLG----RLDIVLANAALASEGTRL 134

Query: 157 --ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLTDDLEFN 213
             +  + +     VN+ G +      +P +        ++  SS GG+            
Sbjct: 135 NRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR----------- 183

Query: 214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA 273
            G+   +  Y  +K     L    +     + I    + P    TP +         R  
Sbjct: 184 -GAE-NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPD 241

Query: 274 GNLRTSEEGADTVLWLALQP 293
               T E+       + + P
Sbjct: 242 LENPTVEDFQVASRQMHVLP 261

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 64.5 bits (158), Expect = 3e-12
 Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              +VT      G  +A  L+  G TV     S ++ +  L A                 
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-ELEAFAETYPQ-------LKP 53

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTITE 178
            S  E        +     V VLV+N       + I     E +        +  + +  
Sbjct: 54  MSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113

Query: 179 SMVPLLEKAAPDARVITVSS 198
           ++   ++K      +I ++S
Sbjct: 114 AVASQMKKRK-SGHIIFITS 132

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 64.9 bits (159), Expect = 4e-12
 Identities = 50/266 (18%), Positives = 84/266 (31%), Gaps = 43/266 (16%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV----------------CRSK 95
           P  M  R+EGK   VTGA  G G + A  LA  GA +  V                  + 
Sbjct: 2   PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTP 61

Query: 96  EKGETALSAIRSKTGNENVHLELCDLSSITEIKSF----ANRFSLKNKPVHVLVNNAGVL 151
           E        ++       V  E  D+     +K+       +       + ++V NAG+ 
Sbjct: 62  EDLAETADLVK-GHNRRIVTAE-VDVRDYDALKAAVDSGVEQLG----RLDIIVANAGIG 115

Query: 152 ENNRLI---TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS-GGMYTAHLT 207
                +   + E +     +N+ G +   ++ VP +        +I  SS GG+      
Sbjct: 116 NGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK----- 170

Query: 208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS 267
                   ++     Y   K   V L   +     +  I   S+HP   +TP +      
Sbjct: 171 --------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF 222

Query: 268 FNERFAGNLRTSEEGADTVLWLALQP 293
              R        ++ A         P
Sbjct: 223 KMFRPDLENPGPDDMAPICQMFHTLP 248

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 26/148 (17%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           ++ +VTG  +G+G A A  L +RG  V +V   + +GE  +                 D+
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRV-VVLDLRREGEDLIYV-------------EGDV 48

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEG------FELNFAVNVLGTYT 175
           +   +++  A   + +  P+  +V+ AGV    +++  EG      F     VN+LGT+ 
Sbjct: 49  TREEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 107

Query: 176 ITESMVPLLEKAAPDA-----RVITVSS 198
           +       + +  PDA      ++  +S
Sbjct: 108 VLRLAAWAMRENPPDAEGQRGVIVNTAS 135

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 63.8 bits (156), Expect = 8e-12
 Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 14/140 (10%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTGA++G G A AE   + G TV    R  E     L  + +    +       D++   
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARRTEA----LDDLVAAYP-DRAEAISLDVTDGE 64

Query: 126 EIKSFANRFSLKNKPVHVLVNNAG-----VLENNRLITSEGFELNFAVNVLGTYTITESM 180
            I   A     +   V VLVNNAG       E     T       F ++V G   +T ++
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE---TTERELRDLFELHVFGPARLTRAL 121

Query: 181 VPLLEKAAPDARVITVSSGG 200
           +P + +      V+ +SS G
Sbjct: 122 LPQM-RERGSGSVVNISSFG 140

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 65.2 bits (159), Expect = 9e-12
 Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 26/175 (14%)

Query: 44  KEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVY---MVCRSKEKGET 100
             H  +    D + R +G+  VVTGA AG+G   A   A RGA V    +       G +
Sbjct: 2   HHHHHHMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGAS 61

Query: 101 ALSA------IRSKTGNENVHLELCDLSSITE----IKSFANRFSLKNKPVHVLVNNAGV 150
             +A      IR   G E V     D +S+ +    I++    F      V +LVNNAG+
Sbjct: 62  QRAADIVVDEIRKA-GGEAV----ADYNSVIDGAKVIETAIKAFG----RVDILVNNAGI 112

Query: 151 LENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVI-TVSSGGMY 202
           L +  L   + + + L   V++ G++  T++  P + K     R+I T S+ G+Y
Sbjct: 113 LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM-KKQNYGRIIMTSSNSGIY 166

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 26/161 (16%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSA------IRSK 108
           R +G+  +VTGA  G+G A A   A RGA V    +    K  G+ + +A      IR +
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 109 TGNENVHLELCDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGF 162
            G       + +  S+      +K+  + F      + V+VNNAG+L +     I+ E +
Sbjct: 66  GGK-----AVANYDSVEAGEKLVKTALDTFG----RIDVVVNNAGILRDRSFSRISDEDW 116

Query: 163 ELNFAVNVLGTYTITESMVPLLEKAAPDARVI-TVSSGGMY 202
           ++   V++ G++ +T +    + K     R+I T S+ G+Y
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHM-KKQNYGRIIMTASASGIY 156

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 26/164 (15%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSA------I 105
                + K  ++TGA  G+G   +   A  GA V    +      +G  + +A      I
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 106 RSKTGNENVHLELCDLSSITE----IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITS 159
               G       + D +++ +    +++    F      VHV++NNAG+L +  +  +T 
Sbjct: 62  VKNGGV-----AVADYNNVLDGDKIVETAVKNFG----TVHVIINNAGILRDASMKKMTE 112

Query: 160 EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG-GMY 202
           + ++L   V++ G + +T++  P   +     R++  SS  G+Y
Sbjct: 113 KDYKLVIDVHLNGAFAVTKAAWPYF-QKQKYGRIVNTSSPAGLY 155

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 24/182 (13%)

Query: 33  YGYMNFTKNGFKEHSKNFKPEDM----QARIEGKNCVVTGANAGIGYATAEGLASRGATV 88
           Y +M          ++     D        ++ K  ++TGA AG+G   A+  A  GA V
Sbjct: 290 YPFMLNDYATLTNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKV 349

Query: 89  YMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITE-----IKSFANRFSLKNKPVHV 143
             V    +     +  I++  G         D   + +     IK+  +++      + +
Sbjct: 350 --VVNDFKDATKTVDEIKAAGGEA-----WPDQHDVAKDSEAIIKNVIDKYG----TIDI 398

Query: 144 LVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG-G 200
           LVNNAG+L +     ++ + ++    V+++GT+ ++    P         R+I ++S  G
Sbjct: 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYF-VEKQFGRIINITSTSG 457

Query: 201 MY 202
           +Y
Sbjct: 458 IY 459

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 60/267 (22%), Positives = 96/267 (35%), Gaps = 53/267 (19%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATV---YMVCRSKEKGETALSA---- 104
           P  M   ++G+  +VTGA  GIG A A   A+ GA V    +         +  SA    
Sbjct: 19  PGSM-GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSV 77

Query: 105 ---IRSKTGNENVHLELCDLSSITE-------IKSFANRFSLKNKPVHVLVNNAGVLENN 154
              I +  G       + D S++ +       I++    F      + VLVNNAG++ + 
Sbjct: 78  VDEITAAGGE-----AVADGSNVADWDQAAGLIQTAVETFG----GLDVLVNNAGIVRDR 128

Query: 155 RL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-----DARVITVSSG-GMYTAHL 206
            +   + E F+   AV++ G +             +      D R+I  SSG G+     
Sbjct: 129 MIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ---- 184

Query: 207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWS-EMYKEKGIGFYSMHPGWAETPGVAKSM 265
                   GS  G   Y+  K     LT   + EM +  G+   ++ P  A T       
Sbjct: 185 --------GSV-GQGNYSAAKAGIATLTLVGAAEMGR-YGVTVNAIAPS-ARTRMTETVF 233

Query: 266 PSFNERFAGNLR--TSEEGADTVLWLA 290
                    +      E  +  V+WL 
Sbjct: 234 AEMMATQDQDFDAMAPENVSPLVVWLG 260

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 59.1 bits (144), Expect = 3e-10
 Identities = 56/275 (20%), Positives = 93/275 (33%), Gaps = 54/275 (19%)

Query: 52  PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMV--CR----------SKEKGE 99
           P  M    EGK  ++TG   G+G + A  LA  GA + +   C           + +   
Sbjct: 2   PGSMA-DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLA 60

Query: 100 TALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--I 157
             ++ +  KTG         D+     ++SF          + + + NAG+     L  +
Sbjct: 61  ETVALVE-KTGRR-CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV 118

Query: 158 TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS--GGMYTAHLTDDLEFNSG 215
            S  ++     N+ GT+    ++ P + K     R++TVSS  G                
Sbjct: 119 ESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNY-GRIVTVSSMLGHSANF----------- 166

Query: 216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET-------------PGVA 262
                  Y  +K   + LT+  +      GI   ++ PG  ET             P + 
Sbjct: 167 ---AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLE 223

Query: 263 KSMPSFNERFAGNLR-------TSEEGADTVLWLA 290
           K      E    +L          EE    VL+L 
Sbjct: 224 KPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLV 258

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 42/203 (20%), Positives = 66/203 (32%), Gaps = 38/203 (18%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  V+ GA+  +G A      +RG  V  V R  EK +           NE++ ++  D+
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADV 55

Query: 122 SSITEIKS-FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           SS+ E+                 +++      NN  I        +   +    TI + +
Sbjct: 56  SSLDEVCEVCKG--------ADAVISAFNPGWNNPDI--------YDETIKVYLTIIDGV 99

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM 240
                K A   R + V   G  +  +   L                K    AL E +   
Sbjct: 100 -----KKAGVNRFLMVGGAG--SLFIAPGLRLMDSGEVPENILPGVK----ALGEFYLNF 148

Query: 241 Y-KEKGIGFYSMHPGWAETPGVA 262
             KEK I +    P     PGV 
Sbjct: 149 LMKEKEIDWVFFSPAADMRPGVR 171

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 28/163 (17%)

Query: 49  NFKPEDMQARIEGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRS 107
           +          +G +  + GA AG +G    + L   G+        K   +  L  +  
Sbjct: 2   HHSSGRENLYFQGMHIAIIGA-AGMVGRKLTQRLVKDGSL-----GGKPVEKFTLIDVFQ 55

Query: 108 KTGNENVH----LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVL----ENNRLITS 159
                           DLS+  E +       L      V+ + A ++    E +     
Sbjct: 56  PEAPAGFSGAVDARAADLSAPGEAEK------LVEARPDVIFHLAAIVSGEAELD----- 104

Query: 160 EGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY 202
             F+  + +N+ GT  + +++     K     RV+  SS  ++
Sbjct: 105 --FDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF 145

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 51/349 (14%), Positives = 91/349 (26%), Gaps = 94/349 (26%)

Query: 44  KEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK--EKGETA 101
            +    F   ++  +I     ++T     +   T    A+    + +   S      E  
Sbjct: 256 AKAWNAF---NLSCKI-----LLTTRFKQV---TDFLSAATTTHISLDHHSMTLTPDEV- 303

Query: 102 LSAIRSKTGNENVHL--ELCD-----LSSITE-IKSFANRF-----------------SL 136
            S +          L  E+       LS I E I+     +                 SL
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 137 KN-KPVHV--LVNNAGVLENNRLITSEGFELNFAVNVLG------TYTITESMVPLLEK- 186
              +P     + +   V   +  I +          +L         +    +V  L K 
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTI---------LLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 187 --AAPDARVITVSSGGMY---TAHLTDDLEFNSGSFDGMEQYARNKRVQV-ALTEKWSEM 240
                  +  T+S   +Y      L ++   +  S   ++ Y   K      L   + + 
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHR-SI--VDHYNIPKTFDSDDLIPPYLDQ 471

Query: 241 YKEKGIGFYSM---HPGWAETPGVAKSMPS--FNERFAGN-LRTSEEGADTVLWLALQPK 294
           Y      FYS    H    E P           + RF    +R      D+  W A    
Sbjct: 472 Y------FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR-----HDSTAWNASGSI 520

Query: 295 EKLVS-----GSFYFDRAEAPKHL-----KFAATAASHARIDPIVDVLR 333
              +        +  D     + L      F      +       D+LR
Sbjct: 521 LNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.98
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.98
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.89
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.88
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.85
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.85
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.84
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.81
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.81
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.81
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.8
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.78
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.73
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.72
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.71
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.69
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.68
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.66
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.66
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.65
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.64
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.48
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.42
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.23
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.15
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.89
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.84
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.76
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.76
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.71
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.66
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.65
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.6
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.57
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.46
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.46
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.41
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.4
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.39
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.34
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.33
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.32
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.29
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.27
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.27
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.21
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.19
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.18
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.15
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.11
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.07
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.05
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.04
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.04
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.03
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.02
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.02
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.98
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.95
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.94
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.93
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.93
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.91
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.86
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.86
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.85
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.85
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.85
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.81
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.8
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.79
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.78
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.75
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.74
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.73
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.72
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.64
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.63
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.62
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.61
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.61
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.6
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.6
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.59
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.57
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.56
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.55
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.47
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.46
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.45
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.43
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.42
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.39
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.37
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.37
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.37
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.37
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.34
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.34
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.33
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.29
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.26
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.2
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.19
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.19
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.19
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.18
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.17
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.17
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.17
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.13
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.12
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.12
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.11
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.1
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.09
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.09
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.07
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.06
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.99
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.99
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.98
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.98
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.97
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.95
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.94
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.94
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.91
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.89
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.88
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.84
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.84
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.81
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.79
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.77
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.76
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.74
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.74
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.73
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.71
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.66
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.66
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.65
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.64
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.61
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.61
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.59
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.58
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.57
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.56
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.56
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.55
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.55
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.55
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.53
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.52
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.51
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.51
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.5
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.48
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.44
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.43
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.42
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.42
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.41
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.4
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.39
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.37
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.31
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.25
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.23
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.19
1lnq_A	336	MTHK channels, potassium channel related protein;	96.16
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.13
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	96.13
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.07
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.98
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.95
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.9
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.89
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.87
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.86
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.85
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.85
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.81
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.81
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.78
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.78
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.75
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.75
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	95.75
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.73
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.71

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=4.7e-54  Score=380.00  Aligned_cols=236  Identities=21%  Similarity=0.257  Sum_probs=209.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999766  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +|+||+||||||+....   ...+.++|++++++|+.|+|+++|+++|+|+++ ++|+||++||.++.            
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~~g~------------  148 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTASIAGI------------  148 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhc------------
Confidence            99999999999986542   237899999999999999999999999999988 67999999999987            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHH----H--HHhccCCCHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFN----E--RFAGNLRTSEEGADT  285 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~----~--~~~~~~~~~~e~A~~  285 (339)
                      .+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......   ...    +  .+.+|+.+|||+|++
T Consensus       149 ~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~  228 (254)
T 4fn4_A          149 RGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANV  228 (254)
T ss_dssp             CSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            3567889999999999999999999999999999999999999998754321   111    1  135889999999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||+|+...+.++..+.+|||-
T Consensus       229 v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          229 IVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhcCCcCCEEEeCCCc
Confidence            99999976666666667789984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.7e-54  Score=379.20  Aligned_cols=237  Identities=19%  Similarity=0.267  Sum_probs=212.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999876  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+....+.  .+.++|++++++|+.|+|+++|+++|+|.+++++|+||++||..+.            .
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~------------~  151 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ------------A  151 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------S
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc------------C
Confidence            9999999999999876654  6899999999999999999999999999877678999999999987            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......  +..     ..|.+|+.+|+|+|+.++|
T Consensus       152 ~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~f  231 (255)
T 4g81_D          152 ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIF  231 (255)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            567889999999999999999999999999999999999999998764322  111     2256889999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+...+.++..+.+|||-
T Consensus       232 L~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          232 LSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhCCCcCCEEEECCCe
Confidence            99976666666677789984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=7.2e-53  Score=375.94  Aligned_cols=237  Identities=24%  Similarity=0.363  Sum_probs=200.8

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHH
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      ...|..+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|++++++++
T Consensus        20 ~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           20 FQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             -----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHH
T ss_pred             hhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHH
Confidence            345667799999999999999999999999999999999999999988887776     346788999999999999999


Q ss_pred             HHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +++.+++|+||+||||||+....+.  .+.++|++++++|+.|+|+++|+++|+|++   +|+||++||..+.       
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~-------  164 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGS-------  164 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGG-------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhc-------
Confidence            9999999999999999998765543  789999999999999999999999999964   4899999999887       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------HH-----HHHhccCC
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------FN-----ERFAGNLR  277 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~-----~~~~~~~~  277 (339)
                           .+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.......       ..     ..|.+|+.
T Consensus       165 -----~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g  239 (273)
T 4fgs_A          165 -----TGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVG  239 (273)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCB
T ss_pred             -----cCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCc
Confidence                 35788899999999999999999999999999999999999999987654211       11     12468899


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|||+|++++||+|+...+.++..+.+|||-
T Consensus       240 ~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          240 RAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            9999999999999977666666677789984

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.4e-51  Score=364.29  Aligned_cols=238  Identities=22%  Similarity=0.277  Sum_probs=202.2

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |+.+|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHH
Confidence            445699999999999999999999999999999999999988754 44555555  347889999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .+++|++|+||||||+..... ..+.++|++.+++|+.++|+++|+++|+|+++  +|+||++||..+..          
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~----------  145 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVT----------  145 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHH----------
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhcc----------
Confidence            999999999999999865433 36889999999999999999999999999765  59999999999873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHHHH-----Hh-ccCCCHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFNER-----FA-GNLRTSEE  281 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~~-----~~-~~~~~~~e  281 (339)
                        +.++..+|++||+|+.+|+|++|.|++++|||||+|+||+|+||+......      ...+.     ++ +|+.+|||
T Consensus       146 --~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pee  223 (258)
T 4gkb_A          146 --GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE  223 (258)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHH
Confidence              467889999999999999999999999999999999999999998765421      11111     23 48899999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +|+.++||+|+...+.++..+.+|||-.
T Consensus       224 iA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          224 IADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            9999999999766666666677899953

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-51  Score=361.84  Aligned_cols=230  Identities=24%  Similarity=0.316  Sum_probs=197.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++.+.  +.++..+.+|++|+++++++++     
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST-----
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH-----
Confidence            489999999999999999999999999999999999865  3455566555  3478999999999998876653     


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++++++|+.|+|+++|+++|+|.+++++|+||++||..+.            .
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------------~  144 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------------Q  144 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------S
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------------C
Confidence            5899999999999876554  6899999999999999999999999999888668999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......  ...+     .|++|+.+|||+|++++|
T Consensus       145 g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~f  224 (247)
T 4hp8_A          145 GGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVF  224 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            567889999999999999999999999999999999999999998764422  1112     246889999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+...+.++..+.+|||-
T Consensus       225 LaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          225 LSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             HTSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhcCCcCCeEEECccc
Confidence            99976666666667789984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.9e-51  Score=359.54  Aligned_cols=224  Identities=21%  Similarity=0.242  Sum_probs=192.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++.        .+.++..+.+|++|++++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~----~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFEA----L   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHHH----C
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHHh----c
Confidence            6899999999999999999999999999999999998765421        135788999999999999888764    6


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      |++|+||||||+..+...++.++|++++++|+.|+|+++|+++|+|+++  +|+||++||..+.            .+.+
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~------------~~~~  142 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYST------------FGSA  142 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGT------------SCCS
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeecccc------------CCCC
Confidence            8999999999998776678999999999999999999999999999765  5999999999887            3567


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHHHHHHHHHHhc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      +..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......  +..+     .|++|+.+|+|+|+.++||+|
T Consensus       143 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS  222 (242)
T 4b79_A          143 DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCG  222 (242)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            889999999999999999999999999999999999999998765432  2222     246889999999999999999


Q ss_pred             cCCCCCCCcceeeCCCC
Q 019551          292 QPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~  308 (339)
                      +...+.++..+.+|||-
T Consensus       223 d~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          223 PGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCccCceEEECccH
Confidence            76666666666789983

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=6.7e-50  Score=352.01  Aligned_cols=227  Identities=22%  Similarity=0.266  Sum_probs=196.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+||||||++|||+++|++|+++|++|++++|+++++++..+    .  ..++.++.+|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5999999999999999999999999999999999877655433    2  346889999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||+......  .+.++|++++++|+.|+|+++|+++|+|+++  +|+||++||..+.            .+.+
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~------------~~~~  141 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAF------------QSEP  141 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGT------------SCCT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccc------------cCCC
Confidence            9999999998776554  6889999999999999999999999999875  5999999999887            4567


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-HHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-RFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      +..+|++||+|+.+|+|+||.|+++ |||||+|+||+|+|++..+..++..+ .|.+|+.+|+|+|++++||+|+  .+.
T Consensus       142 ~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~i  218 (247)
T 3ged_A          142 DSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFI  218 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCC
Confidence            8899999999999999999999997 99999999999999988766554433 4678999999999999999983  345


Q ss_pred             CCcceeeCCCCCC
Q 019551          298 VSGSFYFDRAEAP  310 (339)
Q Consensus       298 ~~G~~~~d~~~~~  310 (339)
                      ++..+.+|||-..
T Consensus       219 TG~~i~VDGG~s~  231 (247)
T 3ged_A          219 TGETIIVDGGMSK  231 (247)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCeEEECcCHHH
Confidence            5556677999543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.9e-49  Score=353.10  Aligned_cols=230  Identities=19%  Similarity=0.260  Sum_probs=195.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++.            ..+..++.+|++++++++++++++.++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999986521            123346889999999999999999999


Q ss_pred             CCCccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +|++|+||||||+....    ..++.++|++.+++|+.++++++|+++|+|+++ ++|+||++||..+..+         
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~~~~~~---------  145 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSIQRVLP---------  145 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC---------
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEehhhccC---------
Confidence            99999999999986532    236889999999999999999999999999988 6799999999988732         


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--------------HHH-----HHhc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--------------FNE-----RFAG  274 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--------------~~~-----~~~~  274 (339)
                        ...+...|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.......              ...     .|.+
T Consensus       146 --~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  223 (261)
T 4h15_A          146 --LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG  223 (261)
T ss_dssp             --CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC
Confidence              1235789999999999999999999999999999999999999976432211              111     1457


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCCc
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      |+.+|||+|+.++||+|+...+.++..+.+|||-+++
T Consensus       224 R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v~T  260 (261)
T 4h15_A          224 RPAKPEEVANLIAFLASDRAASITGAEYTIDGGTVPT  260 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCccc
Confidence            8999999999999999976666666667789997654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.2e-48  Score=345.54  Aligned_cols=235  Identities=13%  Similarity=0.085  Sum_probs=203.4

Q ss_pred             ccCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.. +.++.++.+|++|+++++++++++.
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            58999999999875  99999999999999999999999999888877776553 4578899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.+|++|+||||||+....      ...+.++|+..+++|+.+++.+++.+.|+|+   ++|+||++||.++.       
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~IVnisS~~~~-------  151 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP---EGGSIVATTYLGGE-------  151 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT---TCEEEEEEECGGGT-------
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCEEEEEeccccc-------
Confidence            9999999999999986532      2257788999999999999999999988764   46999999999887       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~-----~~~~~~~~~~~e~  282 (339)
                           .+.+++..|++||+|+.+|+|+||.|++++|||||+|+||+++|++.....  ++..     ..|++|+.+|||+
T Consensus       152 -----~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peev  226 (256)
T 4fs3_A          152 -----FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEV  226 (256)
T ss_dssp             -----SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             -----cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                 357888999999999999999999999999999999999999999876543  2211     2256889999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++||+|+...+.++..+.+|||-
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            99999999976666666666789983

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.6e-46  Score=336.38  Aligned_cols=239  Identities=22%  Similarity=0.255  Sum_probs=208.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999998887666667999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+.            .
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~  151 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVNSLLAS------------Q  151 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEEEGGGT------------S
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEECCcccC------------C
Confidence            999999999999876544  36889999999999999999999999999876 57999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----------hHH----H---HHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----------SFN----E---RFAGNLRT  278 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~----~---~~~~~~~~  278 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......          ...    .   .+.+++.+
T Consensus       152 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  231 (265)
T 3lf2_A          152 PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGK  231 (265)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcC
Confidence            567889999999999999999999999999999999999999987643211          111    1   34577889


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|+|++++||+++.....++..+.+|||..
T Consensus       232 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          232 PIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             HHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            9999999999998665555555567799853

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.5e-45  Score=333.53  Aligned_cols=243  Identities=21%  Similarity=0.260  Sum_probs=204.3

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC----------------chhHHHHHHHHHhhcCCccEE
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS----------------KEKGETALSAIRSKTGNENVH  115 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~----------------~~~~~~~~~~l~~~~~~~~~~  115 (339)
                      |..|..+++||++|||||++|||+++|++|+++|++|++++|+                .+++++..+++...  +.++.
T Consensus         2 p~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   79 (286)
T 3uve_A            2 PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIV   79 (286)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEE
T ss_pred             CCCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceE
Confidence            3446667899999999999999999999999999999999987                56666666666554  35799


Q ss_pred             EEeccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCE
Q 019551          116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDAR  192 (339)
Q Consensus       116 ~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~  192 (339)
                      ++.+|++|+++++++++++.+.++++|+||||||+.....   ..+.++|++++++|+.|+++++++++|+|.+++.+|+
T Consensus        80 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~  159 (286)
T 3uve_A           80 TAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGS  159 (286)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcE
Confidence            9999999999999999999999999999999999876543   3688999999999999999999999999988755799


Q ss_pred             EEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------
Q 019551          193 VITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------  265 (339)
Q Consensus       193 Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------  265 (339)
                      ||++||..+.            .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....       
T Consensus       160 iv~isS~~~~------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  227 (286)
T 3uve_A          160 IILTSSVGGL------------KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP  227 (286)
T ss_dssp             EEEECCGGGT------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred             EEEECchhhc------------cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence            9999999887            356788999999999999999999999999999999999999999875311       


Q ss_pred             ------hhHHHH---H----hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          266 ------PSFNER---F----AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       266 ------~~~~~~---~----~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                            +.....   .    .+++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          228 DLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             TSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence                  111111   0    156789999999999999876665566667789984

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.2e-46  Score=333.84  Aligned_cols=245  Identities=20%  Similarity=0.263  Sum_probs=208.1

Q ss_pred             CCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           49 NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        49 ~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      ...|..|..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.++++
T Consensus        16 ~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~   93 (270)
T 3ftp_A           16 TQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVD   93 (270)
T ss_dssp             -------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHH
T ss_pred             CCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHH
Confidence            334556777799999999999999999999999999999999999999998888888765  346788999999999999


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++++++.+.++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|.++ +.|+||++||..+..   
T Consensus        94 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~---  169 (270)
T 3ftp_A           94 ALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGSA---  169 (270)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCC---
Confidence            999999999999999999999876543  36889999999999999999999999999887 679999999988873   


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHH
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEE  281 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e  281 (339)
                               +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++....     +.+++.+|+|
T Consensus       170 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~ped  240 (270)
T 3ftp_A          170 ---------GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPED  240 (270)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHH
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHH
Confidence                     46778999999999999999999999999999999999999999865543332222     2467889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|++++||+++.....++..+.+|||.
T Consensus       241 vA~~v~~L~s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          241 IAHAVAFLASPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhCCCcCCccCcEEEECCCc
Confidence            999999999866555555566779984

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.9e-45  Score=335.04  Aligned_cols=246  Identities=15%  Similarity=0.221  Sum_probs=205.7

Q ss_pred             CCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCccEEE
Q 019551           49 NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        49 ~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      ...|..|..+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.+
T Consensus        16 ~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   93 (299)
T 3t7c_A           16 TQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIA   93 (299)
T ss_dssp             ------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEE
T ss_pred             CCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEE
Confidence            3355667778999999999999999999999999999999999987            66777777777654  357999


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEE
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARV  193 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~I  193 (339)
                      +.+|++|+++++++++++.+.++++|+||||||+.....   ..+.++|++.+++|+.|++.++++++|.|.++++.|+|
T Consensus        94 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~I  173 (299)
T 3t7c_A           94 SQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSI  173 (299)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred             EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            999999999999999999999999999999999876543   36889999999999999999999999999877557999


Q ss_pred             EEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--------
Q 019551          194 ITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------  265 (339)
Q Consensus       194 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------  265 (339)
                      |++||.++.            .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....        
T Consensus       174 v~isS~~~~------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  241 (299)
T 3t7c_A          174 VFTSSIGGL------------RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPD  241 (299)
T ss_dssp             EEECCGGGT------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTT
T ss_pred             EEECChhhc------------cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhh
Confidence            999999887            346778999999999999999999999999999999999999999875321        


Q ss_pred             ---hhHHH------H---HhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          266 ---PSFNE------R---FAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       266 ---~~~~~------~---~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         +....      .   ..+++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          242 LENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             SSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence               00000      0   0156789999999999999976665566666789985

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-46  Score=333.58  Aligned_cols=243  Identities=23%  Similarity=0.328  Sum_probs=203.8

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHhhcCCccEEEEe
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-------------SKEKGETALSAIRSKTGNENVHLEL  118 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~  118 (339)
                      |..|..+++||++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...  +.++.++.
T Consensus         2 p~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   79 (277)
T 3tsc_A            2 PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAV   79 (277)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEE
T ss_pred             CCccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEE
Confidence            344666789999999999999999999999999999999998             566777776666554  35789999


Q ss_pred             ccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEE
Q 019551          119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITV  196 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~v  196 (339)
                      +|++|+++++++++++.+.++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|.+++.+|+||++
T Consensus        80 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~i  159 (277)
T 3tsc_A           80 VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI  159 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            9999999999999999999999999999999987654  36889999999999999999999999999887557999999


Q ss_pred             cCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----------
Q 019551          197 SSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----------  266 (339)
Q Consensus       197 sS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----------  266 (339)
                      ||..+..            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......          
T Consensus       160 sS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  227 (277)
T 3tsc_A          160 SSAAGMK------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETN  227 (277)
T ss_dssp             CCGGGTS------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTC
T ss_pred             ccHhhCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhccccc
Confidence            9998873            467788999999999999999999999999999999999999998654211          


Q ss_pred             -hHHHH----HhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          267 -SFNER----FAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       267 -~~~~~----~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       .....    ...++.+|+|+|++++||++++....++..+.+|||.
T Consensus       228 ~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          228 PQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             GGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence             00000    0125789999999999999976666666667789984

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.4e-45  Score=328.65  Aligned_cols=238  Identities=22%  Similarity=0.267  Sum_probs=207.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999999888888765  35789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .++++|+||||||+..... ..+.++|++.+++|+.|++.++++++|+|+++ +.|+||++||..+.            .
T Consensus        86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~------------~  152 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGE------------N  152 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGT------------C
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHHc------------C
Confidence            9999999999999876544 46789999999999999999999999999877 67999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..... ++....     +.+++.+|+|+|++++||
T Consensus       153 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          153 TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFL  232 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            46778999999999999999999999999999999999999999865432 222221     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++.....++..+.+|||..
T Consensus       233 ~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             cCCcccCccCCEEEECCCcc
Confidence            98655555556667799854

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-45  Score=327.17  Aligned_cols=240  Identities=23%  Similarity=0.276  Sum_probs=208.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ..++.++.+|++|+++++++++++.+
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999999999888887653 25789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++++++|+.++++++++++|+|+++ +.++||++||..+..           
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~-----------  152 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTSSITGPI-----------  152 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEECCSBTTT-----------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhcc-----------
Confidence            9999999999999876544  36889999999999999999999999999887 579999999987642           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++....     +.+++.+|+|+|++++||
T Consensus       153 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L  232 (262)
T 3pk0_A          153 TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFL  232 (262)
T ss_dssp             BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            245778899999999999999999999999999999999999999876544433332     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++++....++..+.+|||..
T Consensus       233 ~s~~~~~itG~~i~vdGG~~  252 (262)
T 3pk0_A          233 ATKEAGYITGQAIAVDGGQV  252 (262)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCccccCCcCCEEEECCCee
Confidence            98665555555667899964

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=8e-46  Score=328.41  Aligned_cols=235  Identities=25%  Similarity=0.311  Sum_probs=204.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888777766     347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|++++..++||++||..+..            
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  145 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA------------  145 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH------------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc------------
Confidence            999999999999886554  368899999999999999999999999999875579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----H--HHhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----E--RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~--~~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...    .  .+.+++.+|+|+|+.++||
T Consensus       146 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L  225 (247)
T 3rwb_A          146 GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFL  225 (247)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHH
Confidence            467789999999999999999999999999999999999999997654332211    1  2346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++.....++..+.+|||..
T Consensus       226 ~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          226 ASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTSS
T ss_pred             hCccccCCCCCEEEECCCcc
Confidence            98765555555666799853

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.2e-45  Score=325.72  Aligned_cols=233  Identities=24%  Similarity=0.286  Sum_probs=203.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++..     +...+.+|++|+++++++++++.+.
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888877776632     4678899999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|+|+++ +.|+||++||..+..            
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------  147 (248)
T 3op4_A           81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVVGTM------------  147 (248)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcC------------
Confidence            9999999999998876543  6889999999999999999999999999887 679999999988873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++....     +.+++.+|+|+|++++||+
T Consensus       148 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~  227 (248)
T 3op4_A          148 GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA  227 (248)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            45778999999999999999999999999999999999999999876654333222     3467889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....++..+.+|||.
T Consensus       228 s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          228 SPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CCccCCccCcEEEECCCe
Confidence            865555555566779984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-45  Score=328.18  Aligned_cols=241  Identities=19%  Similarity=0.237  Sum_probs=205.6

Q ss_pred             cccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           53 EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        53 ~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      ..|...++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   80 (264)
T 3ucx_A            3 GSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVD   80 (264)
T ss_dssp             ----CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHH
Confidence            34555689999999999999999999999999999999999999999988888765  3578999999999999999999


Q ss_pred             HHhcCCCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          133 RFSLKNKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      ++.+.++++|+||||||+... ..  ..+.++|++.+++|+.+++.++++++|.|.++  +|+||++||..+.       
T Consensus        81 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~-------  151 (264)
T 3ucx_A           81 ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSMVVR-------  151 (264)
T ss_dssp             HHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCGGGG-------
T ss_pred             HHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcchhc-------
Confidence            999999999999999998633 22  36889999999999999999999999999876  3999999999887       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----------hHHHH-----Hh
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----------SFNER-----FA  273 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----------~~~~~-----~~  273 (339)
                           .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......           +..+.     +.
T Consensus       152 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  226 (264)
T 3ucx_A          152 -----HSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL  226 (264)
T ss_dssp             -----CCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSS
T ss_pred             -----cCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCc
Confidence                 3467788999999999999999999999999999999999999998654321           11111     24


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          274 GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++.+|+|+|++++||+++.....++..+.+|||..
T Consensus       227 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          227 KRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             SSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            678899999999999998766555566667899863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.1e-45  Score=329.29  Aligned_cols=239  Identities=23%  Similarity=0.276  Sum_probs=208.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ .++.++.+|++|+++++++++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999999999988888876443 5799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.+++.++++++|.|.+++.+++||++||..+.            
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~------------  162 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL------------  162 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc------------
Confidence            99999999999999876543  6889999999999999999999999999987557899999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~  287 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  +....     .+.+++.+|+|+|++++
T Consensus       163 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          163 APLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            346778899999999999999999999999999999999999999765332  11111     13467889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+++.....++..+.+|||.
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhcCccCcEEEECCCc
Confidence            999876665556666789984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-45  Score=326.56  Aligned_cols=238  Identities=23%  Similarity=0.321  Sum_probs=202.1

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHH
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      |..|..+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|++++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~   76 (271)
T 3tzq_B            2 PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALI   76 (271)
T ss_dssp             -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHH
Confidence            344666789999999999999999999999999999999999999888877766     346888999999999999999


Q ss_pred             HHHhcCCCCccEEEEccccccC-C-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          132 NRFSLKNKPVHVLVNNAGVLEN-N-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~-~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      +++.+.++++|+||||||+... . .  ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..    
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~----  151 (271)
T 3tzq_B           77 DFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHA----  151 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcC----
Confidence            9999999999999999998743 2 1  36889999999999999999999999999877 679999999998873    


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHHH-----HhccCCCHHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNER-----FAGNLRTSEE  281 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~-----~~~~~~~~~e  281 (339)
                              +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+ .....     +.+++.+|+|
T Consensus       152 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~d  223 (271)
T 3tzq_B          152 --------AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHE  223 (271)
T ss_dssp             --------BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHH
T ss_pred             --------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHH
Confidence                    457788999999999999999999999999999999999999998763322 22222     3467889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|+.++||+++.....++..+.+|||
T Consensus       224 vA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          224 IAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCcccCCcCCCEEEECCC
Confidence            99999999987655555566677999

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-45  Score=330.49  Aligned_cols=250  Identities=18%  Similarity=0.205  Sum_probs=191.9

Q ss_pred             cccCCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           46 HSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        46 ~~~~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      ..+++..+.|..++++|++|||||++|||+++|++|+++|++|++++| +.+++++..+++...  +.++.++.+|++|+
T Consensus        14 ~~~n~~~~~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   91 (280)
T 4da9_A           14 GTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADL   91 (280)
T ss_dssp             ---------CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSG
T ss_pred             cccchhhhhhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCH
Confidence            334444455656788999999999999999999999999999999995 777777777777654  35789999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccc--cCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEEcC
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVL--ENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAP--DARVITVSS  198 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~--~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~--~~~Iv~vsS  198 (339)
                      ++++++++++.+.++++|+||||||+.  ....  ..+.++|++.+++|+.|++.++++++|.|.+++.  .++||++||
T Consensus        92 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS  171 (280)
T 4da9_A           92 SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITS  171 (280)
T ss_dssp             GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcc
Confidence            999999999999999999999999984  2222  3688999999999999999999999999987632  689999999


Q ss_pred             ccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH------HHH
Q 019551          199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN------ERF  272 (339)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------~~~  272 (339)
                      .++..            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...      ..+
T Consensus       172 ~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p  239 (280)
T 4da9_A          172 VSAVM------------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVP  239 (280)
T ss_dssp             C-------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------
T ss_pred             hhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCC
Confidence            98873            457788999999999999999999999999999999999999998765432211      235


Q ss_pred             hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          273 AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      .+++.+|+|+|++++||+++.....++..+.+|||..
T Consensus       240 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          240 MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            6788999999999999998765555556667899853

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.8e-45  Score=328.92  Aligned_cols=245  Identities=20%  Similarity=0.245  Sum_probs=206.1

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHH
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      |..|..++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+... ..++.++.+|++|+++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A            2 PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             ------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            34566678999999999999999999999999999999999999999998888876532 12788999999999999999


Q ss_pred             HHHHhcCCCCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      ++++.+.++++|+||||||+... .  ...+.++|++.+++|+.|+++++++++|.|.++ ++|+||++||..+..    
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~----  156 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSIAASN----  156 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHS----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCHHHcC----
Confidence            99999999999999999998433 2  236889999999999999999999999999877 679999999998873    


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSE  280 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~  280 (339)
                              +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  ++...     .+.+++.+|+
T Consensus       157 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  228 (281)
T 3svt_A          157 --------THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE  228 (281)
T ss_dssp             --------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHH
T ss_pred             --------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHH
Confidence                    45677899999999999999999999999999999999999999875421  11111     1346788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|++++||+++.....++..+.+|||..
T Consensus       229 dva~~~~~l~s~~~~~itG~~~~vdgG~~  257 (281)
T 3svt_A          229 DVANMAMFLLSDAASFVTGQVINVDGGQM  257 (281)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEeCCChh
Confidence            99999999998765555566667799864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.8e-45  Score=330.40  Aligned_cols=237  Identities=20%  Similarity=0.276  Sum_probs=207.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999998888765  34789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||..+..           
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~~-----------  167 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSLTSEL-----------  167 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-----------
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCC-----------
Confidence            99999999999998765543  6889999999999999999999999999887 579999999988873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  ++..+     .+.+++.+|+|+|++++
T Consensus       168 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~  246 (271)
T 4ibo_A          168 -ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAV  246 (271)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             45778899999999999999999999999999999999999999865432  11111     23577899999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+++.....++..+.+|||.
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCccccCCCCcEEEECCCe
Confidence            999866555555666789985

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-45  Score=328.35  Aligned_cols=238  Identities=23%  Similarity=0.259  Sum_probs=203.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888888654  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+...   ....+.++|++.+++|+.|++.++++++|+|+++ +.++||++||.++...          
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~----------  171 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRT----------  171 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB----------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccC----------
Confidence            9999999999998643   2347889999999999999999999999999887 6799999999887631          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH------------HHh--ccCCCHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE------------RFA--GNLRTSE  280 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~------------~~~--~~~~~~~  280 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........            .+.  +++.+|+
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pe  251 (283)
T 3v8b_A          172 FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE  251 (283)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHH
Confidence            14567889999999999999999999999999999999999999987653211111            122  6788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||+++.....++..+.+|||.
T Consensus       252 dvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          252 DVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            9999999999876665556666789984

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.8e-45  Score=324.31  Aligned_cols=240  Identities=20%  Similarity=0.236  Sum_probs=204.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888887654  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.++++++++++|+|.+++..++||++||..+..            
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  148 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD------------  148 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc------------
Confidence            999999999999876544  368899999999999999999999999997665689999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc-CCCeEEEEeeCCcccCCCccCcc---hh----H-HHHHhccCCCHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK-EKGIGFYSMHPGWAETPGVAKSM---PS----F-NERFAGNLRTSEEGADTV  286 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~---~~----~-~~~~~~~~~~~~e~A~~v  286 (339)
                      +.++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.....   ++    . ...+.+++.+|+|+|+++
T Consensus       149 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  228 (257)
T 3imf_A          149 AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLA  228 (257)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            467788999999999999999999997 77999999999999999754321   11    1 112356788999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCCCc
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      +||++++....++..+.+|||....
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          229 YYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHcCchhcCccCCEEEECCCcccC
Confidence            9999866555555566779996443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=8.1e-45  Score=323.99  Aligned_cols=237  Identities=19%  Similarity=0.202  Sum_probs=205.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++|++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999997 89998888888888654  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|+++++++++|+|+++ +.++||++||.++..            
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------  146 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSIR------------  146 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhCC------------
Confidence            999999999999866544  36889999999999999999999999999877 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ..     ..+.+++.+|+|+|++++|
T Consensus       147 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~  226 (258)
T 3oid_A          147 YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEF  226 (258)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            4677899999999999999999999999999999999999999987654321  11     1235778999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      |++++....++..+.+|||...
T Consensus       227 L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          227 LVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HTSSTTTTCCSCEEEESTTGGG
T ss_pred             HhCcccCCccCCEEEECCCccC
Confidence            9997666666666678999643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.7e-45  Score=326.33  Aligned_cols=234  Identities=21%  Similarity=0.281  Sum_probs=197.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999998887776554     34789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..+..           
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~-----------  165 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVV-----------  165 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC---------------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcC-----------
Confidence            99999999999998765443  5778999999999999999999999999887 679999999988873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...+.     +.+++.+|+|+|++++||
T Consensus       166 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L  244 (266)
T 3grp_A          166 -GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYL  244 (266)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence             46788999999999999999999999999999999999999999876554433332     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....++..+.+|||.
T Consensus       245 ~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          245 ASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCccccCccCCEEEECCCe
Confidence            9876665566666789984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=8.7e-45  Score=329.44  Aligned_cols=241  Identities=21%  Similarity=0.223  Sum_probs=208.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. ..++.++.+|++|+++++++++++.+
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999998888886653 25789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.|+++++++++|.|+++ +.++||++||..+..           
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~-----------  183 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPV-----------  183 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTT-----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhcc-----------
Confidence            9999999999999876554  36889999999999999999999999999887 579999999988742           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++..+.     +.+++.+|+|+|+.++||
T Consensus       184 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL  263 (293)
T 3rih_A          184 TGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFL  263 (293)
T ss_dssp             BBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            135678899999999999999999999999999999999999999765544333322     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      +++.....++..+.+|||..-
T Consensus       264 ~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          264 ATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HSGGGTTCCSCEEEESTTTTC
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            987655555666678999643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.3e-45  Score=328.96  Aligned_cols=234  Identities=24%  Similarity=0.306  Sum_probs=203.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999998888777665     346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||..+..            
T Consensus       101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~------------  167 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSSLAGQV------------  167 (277)
T ss_dssp             HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcc------------
Confidence            999999999999876544  36889999999999999999999999999877 679999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------------hHHHHHhccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------------SFNERFAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------------~~~~~~~~~~~~~~e~A  283 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.....+            .....+.+++.+|+|+|
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA  247 (277)
T 3gvc_A          168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMA  247 (277)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHH
Confidence            467789999999999999999999999999999999999999997543211            11144567899999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++++||+++.....++..+.+|||..
T Consensus       248 ~~v~~L~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          248 GIVVFLLSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCCccCCccCcEEEECCcch
Confidence            99999998766655666677899853

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.2e-44  Score=325.90  Aligned_cols=238  Identities=20%  Similarity=0.266  Sum_probs=206.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999999999888888765  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|.+++.+++||++||..+...          .
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~----------~  176 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII----------N  176 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------C
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc----------C
Confidence            9999999999998875543  688999999999999999999999999998755699999999887642          1


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      ..++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...... ....     +.+++.+|+|+|++++||+
T Consensus       177 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~p~~r~~~pedvA~~v~fL~  255 (276)
T 3r1i_A          177 IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPLGRMGRPEELTGLYLYLA  255 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GHHHHGGGSTTSSCBCGGGSHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            224678999999999999999999999999999999999999998765422 2222     3467889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....++..+.+|||.
T Consensus       256 s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          256 SAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CccccCccCcEEEECcCc
Confidence            976665566666789985

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.4e-44  Score=322.62  Aligned_cols=236  Identities=22%  Similarity=0.261  Sum_probs=203.9

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999998888777766     2467899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+.....  ..+.++|++.+++|+.|+++++++++|.|.+++.+|+||++||..+..          
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  147 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR----------  147 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc----------
Confidence            99999999999999876544  368899999999999999999999999998875579999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----------chhHH-----HHHhccCC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----------MPSFN-----ERFAGNLR  277 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----------~~~~~-----~~~~~~~~  277 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+....           .++..     ..+.+++.
T Consensus       148 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  225 (259)
T 4e6p_A          148 --GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMG  225 (259)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCc
Confidence              4677889999999999999999999999999999999999999976432           11111     12356789


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||+++.....+++.+.+|||.
T Consensus       226 ~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          226 TAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             CTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            9999999999999866666666677789985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=8.4e-45  Score=327.55  Aligned_cols=236  Identities=23%  Similarity=0.322  Sum_probs=201.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999988888765  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHH--HHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVP--LLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~--~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|  .|.++ +.|+||++||..+..          
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~isS~~~~~----------  167 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNIASTGGKQ----------  167 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEEECCGGGTS----------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEEECChhhcc----------
Confidence            9999999999998765543  68899999999999999999999999  57766 579999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----------chhHHHH-----HhccCC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----------MPSFNER-----FAGNLR  277 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----------~~~~~~~-----~~~~~~  277 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....           .++..+.     +.+++.
T Consensus       168 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  245 (279)
T 3sju_A          168 --GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYS  245 (279)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCB
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCC
Confidence              4677889999999999999999999999999999999999999976432           1111111     346788


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||+++.....++..+.+|||.
T Consensus       246 ~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          246 TPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             CHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999999999866555555666779984

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6.5e-45  Score=327.93  Aligned_cols=238  Identities=16%  Similarity=0.153  Sum_probs=205.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+ .++.++.+|++|+++++++++++.+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            348899999999999999999999999999999999999998888888866543 5789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++++++|+.|+++++++++|.|.++ +.++||++||..+..           
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  169 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITATLGNR-----------  169 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCSHHHH-----------
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCC-----------
Confidence            99999999999998765443  6889999999999999999999999999876 579999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHH-----HHHhccCCCHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFN-----ERFAGNLRTSEEGADTV  286 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~-----~~~~~~~~~~~e~A~~v  286 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....   +...     ..+.+++.+|+|+|+++
T Consensus       170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  248 (277)
T 4fc7_A          170 -GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSV  248 (277)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence             45678899999999999999999999999999999999999998542211   1111     12357889999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+++.....++..+.+|||.
T Consensus       249 ~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          249 LYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTH
T ss_pred             HHHcCCccCCcCCCEEEECCCc
Confidence            9999865555555566779984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-44  Score=324.49  Aligned_cols=238  Identities=26%  Similarity=0.346  Sum_probs=203.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-------------SKEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...  +.++.++.+|++|
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRD   88 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCC
Confidence            4588999999999999999999999999999999998             667777777777654  3578999999999


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM  201 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~  201 (339)
                      +++++++++++.+.++++|+||||||+......  .+.++|++++++|+.|++.++++++|+|++++.+++||++||..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            999999999999999999999999999765543  688999999999999999999999999988755799999999988


Q ss_pred             cccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--------hhHHHH--
Q 019551          202 YTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--------PSFNER--  271 (339)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--------~~~~~~--  271 (339)
                      .            .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....        +.....  
T Consensus       169 ~------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
T 3pgx_A          169 L------------KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP  236 (280)
T ss_dssp             T------------SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSC
T ss_pred             c------------cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhh
Confidence            7            356778999999999999999999999999999999999999999875321        000000  


Q ss_pred             ----HhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          272 ----FAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       272 ----~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                          ...++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       237 ~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          237 PMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             CBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence                0124679999999999999876665566667789985

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-44  Score=325.05  Aligned_cols=238  Identities=23%  Similarity=0.287  Sum_probs=199.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.... +.++.++.+|++|.++++++++++.
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999 5667777777776543 3578999999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||..+..          
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~----------  168 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLV----------  168 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS----------
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCccccc----------
Confidence            999999999999998765543  6889999999999999999999999999887 679999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-----------------HHHhccC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-----------------ERFAGNL  276 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-----------------~~~~~~~  276 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...                 ..+.+++
T Consensus       169 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  246 (281)
T 3v2h_A          169 --ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKF  246 (281)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCc
Confidence              467788999999999999999999999999999999999999998764332110                 0134678


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+|+|+|++++||+++.....++..+.+|||.
T Consensus       247 ~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          247 ITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             BCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            89999999999999866555556666779984

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2e-44  Score=319.26  Aligned_cols=235  Identities=22%  Similarity=0.285  Sum_probs=203.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|++|||||++|||+++|++|+++|++|++++| +.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999887 456777777777654  357889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..            
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------  146 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAV------------  146 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcC------------
Confidence            999999999999876544  36889999999999999999999999999887 679999999988773            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+...+.     +.+++.+|+|+|++++||+
T Consensus       147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          147 GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            45678899999999999999999999999999999999999999877655443333     3467889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|||.
T Consensus       227 s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          227 SDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CccccCCCCCEEEeCCCc
Confidence            866555556666779984

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-45  Score=330.36  Aligned_cols=244  Identities=22%  Similarity=0.313  Sum_probs=209.9

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      ..+++||++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++....++.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3468899999999999999999999999998   9999999999999999999887666789999999999999999999


Q ss_pred             HHhcCCCCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          133 RFSLKNKPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      ++.+.++++|+||||||+... .  ...+.++|++++++|+.|++.++++++|+|+++ +.|+||++||..+.       
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~-------  179 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGR-------  179 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGT-------
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhc-------
Confidence            999999999999999998752 2  236889999999999999999999999999887 67999999999887       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hh-HHHHH-hccCCCHHHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PS-FNERF-AGNLRTSEEGAD  284 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~-~~~~~-~~~~~~~~e~A~  284 (339)
                           .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....   ++ ..... .....+|+|+|+
T Consensus       180 -----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~  254 (287)
T 3rku_A          180 -----DAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVAD  254 (287)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHH
T ss_pred             -----CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHH
Confidence                 346778999999999999999999999999999999999999999753221   11 11112 223458999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCCCcc
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEAPKH  312 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~~~~  312 (339)
                      .++||++++....+++.+++|+|+...+
T Consensus       255 ~v~~l~s~~~~~i~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          255 LIVYATSRKQNTVIADTLIFPTNQASPH  282 (287)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEETTEEETT
T ss_pred             HHHHHhCCCCCeEecceEEeeCCCCCCc
Confidence            9999999777666667777899876543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-44  Score=323.93  Aligned_cols=238  Identities=22%  Similarity=0.273  Sum_probs=205.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888888653  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+... ..  ..+.++|++.+++|+.|+++++++++|.|.++ +.|+||++||..+..           
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  150 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHT-----------  150 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCSBTTT-----------
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhCc-----------
Confidence            9999999999998743 22  36889999999999999999999999999887 579999999988762           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----hhHHHH-----HhccCCCHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFNER-----FAGNLRTSEEGADT  285 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~~~~~-----~~~~~~~~~e~A~~  285 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....    +.....     +.+++.+|+|+|++
T Consensus       151 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  230 (280)
T 3tox_A          151 AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEA  230 (280)
T ss_dssp             BCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHH
Confidence            145778899999999999999999999999999999999999999865422    222222     24678899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++||+++.....++..+.+|||..
T Consensus       231 v~~L~s~~a~~itG~~i~vdGG~~  254 (280)
T 3tox_A          231 ALYLASDGASFVTGAALLADGGAS  254 (280)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCccccCCcCcEEEECCCcc
Confidence            999998766656666677899954

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.4e-44  Score=322.56  Aligned_cols=240  Identities=20%  Similarity=0.266  Sum_probs=201.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS------------KEKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++.+|++|+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDR   86 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence            35889999999999999999999999999999999987            66666666666554  34799999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA  204 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~  204 (339)
                      ++++++++++.+.++++|+||||||+.....  +.++|++.+++|+.|+++++++++|+|.+++.+++||++||.++..+
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG  164 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence            9999999999999999999999999876443  67899999999999999999999999988755799999999987743


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HH-HHH----------
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FN-ERF----------  272 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~-~~~----------  272 (339)
                      .        ..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....... .. ...          
T Consensus       165 ~--------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
T 3sx2_A          165 V--------GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMG  236 (278)
T ss_dssp             C--------CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTS
T ss_pred             C--------ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhh
Confidence            1        012367889999999999999999999999999999999999999987643211 00 000          


Q ss_pred             ---hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          273 ---AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       273 ---~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         .+++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       237 ~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          237 NAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             CSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence               135678999999999999876665566666789985

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.1e-44  Score=326.41  Aligned_cols=234  Identities=24%  Similarity=0.330  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+.
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998887776664     346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||..+.            .
T Consensus        99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~  165 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTSYTAT------------S  165 (277)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECCGGGT------------S
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhC------------c
Confidence            999999999999876544  36889999999999999999999999999876 57899999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------hhHHH-----HHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~~~~~-----~~~~~~~~~~e~A~  284 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....      .....     .+.+++.+|+|+|+
T Consensus       166 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  245 (277)
T 4dqx_A          166 AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAE  245 (277)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHH
Confidence            56778999999999999999999999999999999999999999743211      11111     13467889999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++||+++.....++..+.+|||..
T Consensus       246 ~v~~L~s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          246 AMLFLASDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHhCCccCCCcCCEEEECCchh
Confidence            9999998765555555666799853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=7.5e-45  Score=327.12  Aligned_cols=236  Identities=23%  Similarity=0.274  Sum_probs=204.3

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999998888888765  3578999999999999999999998


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +. +++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||..+..          
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~----------  173 (275)
T 4imr_A          106 AI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGSINQLR----------  173 (275)
T ss_dssp             HH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS----------
T ss_pred             Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCC----------
Confidence            77 89999999999876544  36889999999999999999999999999887 679999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhHH-----HH-HhccCCCHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSFN-----ER-FAGNLRTSEEGAD  284 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~-----~~-~~~~~~~~~e~A~  284 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....   ++..     .. +.+++.+|+|+|+
T Consensus       174 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  251 (275)
T 4imr_A          174 --PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVG  251 (275)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHH
Confidence              45667889999999999999999999999999999999999999765432   1111     11 4678889999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +++||+++.....++..+.+|||
T Consensus       252 ~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          252 AALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHcCcccCCCCCCEEEeCCC
Confidence            99999987656555666677987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4e-44  Score=318.42  Aligned_cols=230  Identities=17%  Similarity=0.138  Sum_probs=187.5

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999999999999888766  35799999999999999999999998


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      . +++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||.++.            
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------  146 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATASL------------  146 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGT------------
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHHc------------
Confidence            8 999999999998875543  6889999999999999999999999999887 57999999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEE-EEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGF-YSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v-~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      .+.++...|++||+|+++|+++++.|++++||+| |+|+||+|+|++.....+....     .+.+ +.+|+|+|++++|
T Consensus       147 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          147 RGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCCHHHHHHHHHH
Confidence            3567889999999999999999999999999999 9999999999988765433211     1233 8899999999999


Q ss_pred             HhccCCCCCCCcceee
Q 019551          289 LALQPKEKLVSGSFYF  304 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~  304 (339)
                      |++++...++++ +..
T Consensus       226 l~s~~~~~~~~~-i~~  240 (252)
T 3h7a_A          226 LYQQPKSAWTFE-MEI  240 (252)
T ss_dssp             HHHCCGGGBCSE-EEE
T ss_pred             HHhCchhcceee-EEe
Confidence            999766655444 444

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-44  Score=321.64  Aligned_cols=236  Identities=20%  Similarity=0.258  Sum_probs=200.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS------------KEKGETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++|++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDRA   84 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCHH
Confidence            5889999999999999999999999999999999997            45566666665544  357899999999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT  203 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~  203 (339)
                      +++++++++.+.++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|.++ +.|+||++||..+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcC
Confidence            999999999999999999999999876544  36889999999999999999999999999887 579999999998873


Q ss_pred             cccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------h-----h---HH
Q 019551          204 AHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------P-----S---FN  269 (339)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~-----~---~~  269 (339)
                                  +.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.....      +     .   ..
T Consensus       164 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  231 (281)
T 3s55_A          164 ------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE  231 (281)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH
Confidence                        45778899999999999999999999999999999999999999875311      0     0   01


Q ss_pred             HH------HhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          270 ER------FAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       270 ~~------~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ..      ..+++.+|+|+|++++||++++....++..+.+|||.
T Consensus       232 ~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          232 SVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA  276 (281)
T ss_dssp             HHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            10      1156789999999999999876665556666789985

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-44  Score=321.59  Aligned_cols=239  Identities=24%  Similarity=0.364  Sum_probs=204.3

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++..+..+.+|+++++++++++++ 
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-   82 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-   82 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-
Confidence            4456889999999999999999999999999999999999999999999998877667888999999999998887654 


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                         ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..+..         
T Consensus        83 ---~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~---------  149 (267)
T 3t4x_A           83 ---YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIM---------  149 (267)
T ss_dssp             ---CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTS---------
T ss_pred             ---cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhcc---------
Confidence               5899999999998876543  6789999999999999999999999999877 579999999998873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHHH---------H
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNER---------F  272 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~~---------~  272 (339)
                         +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....           ++....         +
T Consensus       150 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (267)
T 3t4x_A          150 ---PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSI  226 (267)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCS
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCccc
Confidence               46778999999999999999999999999999999999999998654221           111111         2


Q ss_pred             hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          273 AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      .+++.+|+|+|++++||+++.....++..+.+|||...
T Consensus       227 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          227 IQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             SCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             ccCccCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence            36788999999999999986555555666678998643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.1e-45  Score=323.78  Aligned_cols=238  Identities=19%  Similarity=0.261  Sum_probs=201.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++ .++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999888776544 578899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          136 LKNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +.++++|+||||||+..... ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||.++..           
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  150 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKY-----------  150 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC----------------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcC-----------
Confidence            99999999999999876544 35678999999999999999999999999887 679999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......   .+.+++.+|+|+|+.++||++++.
T Consensus       151 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          151 -GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP---FKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             ---CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC---SCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC---cccccCCCHHHHHHHHHHHHcCCC
Confidence             2344789999999999999999999999999999999999999876433211   124568899999999999999877


Q ss_pred             CCCCCcce-eeCCCCCC
Q 019551          295 EKLVSGSF-YFDRAEAP  310 (339)
Q Consensus       295 ~~~~~G~~-~~d~~~~~  310 (339)
                      ..++++.. .+||+...
T Consensus       227 ~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          227 NVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             TEECCEEEEEEHHHHHC
T ss_pred             ceEeeEEEEEeeccccc
Confidence            77777654 46988543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-44  Score=321.55  Aligned_cols=233  Identities=23%  Similarity=0.261  Sum_probs=186.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998887776665     24688899999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcCccccccc
Q 019551          137 KNKPVHVLVNNAGVLENNR------LITSEGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSSGGMYTAH  205 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS~~~~~~~  205 (339)
                      .++++|+||||||+.....      ..+.++|++.+++|+.|++.++++++|+|+++     ++.++||++||..+..  
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~--  155 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD--  155 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc--
Confidence            9999999999999876543      35679999999999999999999999999874     2578999999998874  


Q ss_pred             cCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----Hh-ccCCCH
Q 019551          206 LTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FA-GNLRTS  279 (339)
Q Consensus       206 ~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~-~~~~~~  279 (339)
                                +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...+.     +. +++.+|
T Consensus       156 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~  225 (257)
T 3tpc_A          156 ----------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRA  225 (257)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCH
T ss_pred             ----------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCH
Confidence                      45678899999999999999999999999999999999999999876543332222     22 678899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|++++||+++  ...++..+.+|||.
T Consensus       226 ~dva~~v~~l~s~--~~itG~~i~vdGG~  252 (257)
T 3tpc_A          226 EEYAALVKHICEN--TMLNGEVIRLDGAL  252 (257)
T ss_dssp             HHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHccc--CCcCCcEEEECCCc
Confidence            9999999999974  34444555679984

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.5e-44  Score=322.70  Aligned_cols=237  Identities=22%  Similarity=0.298  Sum_probs=203.5

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...  +.++.++.+|++|.++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999998 566677777777654  3478999999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+......  .+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.++..          
T Consensus       102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~----------  170 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEM----------  170 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCHHHHH----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcC----------
Confidence            999999999999998875543  6889999999999999999999999999887 679999999988873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH--HHHHhccCCCHHHHHHHHHHHhc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF--NERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ...+.+++.+|+|+|++++||++
T Consensus       171 --~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  248 (269)
T 4dmm_A          171 --GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAA  248 (269)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence              45778899999999999999999999999999999999999999876432211  11235678999999999999999


Q ss_pred             cCCCCCCCcc-eeeCCCC
Q 019551          292 QPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~-~~~d~~~  308 (339)
                      ++...+++|+ +.+|||.
T Consensus       249 ~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          249 DPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             CGGGGGCCSCEEEESTTS
T ss_pred             CcccCCCcCCEEEECCCe
Confidence            7555555555 5679984

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2e-43  Score=312.77  Aligned_cols=236  Identities=21%  Similarity=0.299  Sum_probs=207.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999988888888765  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.+++.+++.++|.|.++ +.++||++||..+..            
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  146 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSVVGSA------------  146 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhcc------------
Confidence            9999999999999865543  6889999999999999999999999999887 578999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++....     +.+++.+|+|+|+.++||+
T Consensus       147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          147 GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh
Confidence            45778899999999999999999999999999999999999999887654443332     2456789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....++..+.+|||.
T Consensus       227 s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          227 SEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CCCcCCccCCEEEECCCE
Confidence            866555555666779984

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=4.6e-44  Score=318.02  Aligned_cols=235  Identities=23%  Similarity=0.326  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC--CCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL--SSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~  135 (339)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ .++.++.+|+  +|.++++++++++.
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999999988888876643 3678899999  99999999999999


Q ss_pred             cCCCCccEEEEccccccC---CCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLEN---NRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|+||||||+...   ....+.++|++++++|+.|+++++++++|+|+++ +.++||++||..+..         
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~---------  157 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQ---------  157 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTS---------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhcc---------
Confidence            999999999999998643   2346889999999999999999999999999877 679999999998873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                         +.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++.....+.   ....++.+|+|+|+.++||+++
T Consensus       158 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~---~~~~~~~~p~dva~~~~~L~s~  230 (252)
T 3f1l_A          158 ---GRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT---EDPQKLKTPADIMPLYLWLMGD  230 (252)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT---CCGGGSBCTGGGHHHHHHHHSG
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc---cchhccCCHHHHHHHHHHHcCc
Confidence               46778899999999999999999999887 9999999999999875432221   1134578999999999999987


Q ss_pred             CCCCCCCcceeeCCCCCC
Q 019551          293 PKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~~~  310 (339)
                      .....++..+.+|||..+
T Consensus       231 ~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          231 DSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             GGTTCCSCEEESSCC---
T ss_pred             cccCCCCCEEEeCCCcCC
Confidence            665555556667998644

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.5e-44  Score=318.61  Aligned_cols=232  Identities=23%  Similarity=0.333  Sum_probs=199.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888777665     247899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|+++++++++|+|++   +|+||++||.++..            
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~------------  144 (255)
T 4eso_A           80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEG------------  144 (255)
T ss_dssp             HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSS------------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcC------------
Confidence            9999999999998765443  688999999999999999999999999864   48999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhH----H-----HHHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSF----N-----ERFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~----~-----~~~~~~~~~~~e~A~  284 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+....  .+..    .     ..+.+++.+|+|+|+
T Consensus       145 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  224 (255)
T 4eso_A          145 GHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVAR  224 (255)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHH
Confidence            4678899999999999999999999999999999999999999986532  1111    1     123567889999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      +++||+++ ....++..+.+|||...
T Consensus       225 ~v~~L~s~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          225 AVLFLAFE-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             HHHHHHHT-CTTCCSCEEEESTTTTT
T ss_pred             HHHHHcCc-CcCccCCEEEECCCccc
Confidence            99999986 44444555667998643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=7.8e-44  Score=319.71  Aligned_cols=237  Identities=21%  Similarity=0.253  Sum_probs=199.3

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ..+++||++|||||++|||+++|++|+++|++|++++++ .+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            345889999999999999999999999999999998764 55667777777654  357899999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+.++++|+||||||+......  .+.++|++.+++|+.|+++++++++|+|++   +|+||++||..+..         
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------  158 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKD---------  158 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTT---------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhcc---------
Confidence            9999999999999999865543  688999999999999999999999999964   58999999987331         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----------chh-HH-----HHHhcc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----------MPS-FN-----ERFAGN  275 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----------~~~-~~-----~~~~~~  275 (339)
                        .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....           .++ ..     ..+.++
T Consensus       159 --~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  236 (270)
T 3is3_A          159 --FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR  236 (270)
T ss_dssp             --CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS
T ss_pred             --CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC
Confidence              24677889999999999999999999999999999999999999986521           111 11     123578


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+|+|+|++++||+++.....++..+.+|||.
T Consensus       237 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            889999999999999865555555556779984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-44  Score=319.35  Aligned_cols=238  Identities=23%  Similarity=0.284  Sum_probs=203.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|++|+++++++++++.+.
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888888876544457899999999999999999999999


Q ss_pred             CCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+... ..  ..+.++|++++++|+.|++.++++++|.|+++ +.++||++||..+..           
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  157 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIR-----------  157 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTS-----------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcc-----------
Confidence            9999999999998754 22  36789999999999999999999999999877 579999999998763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc----chhHHH----H-----HhccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS----MPSFNE----R-----FAGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~----~~~~~~----~-----~~~~~~~~~e  281 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++|++....    .+....    .     +.+++.+|+|
T Consensus       158 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  236 (267)
T 1iy8_A          158 -GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE  236 (267)
T ss_dssp             -BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHH
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHH
Confidence             3567889999999999999999999999999999999999999975431    111111    1     3457789999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+.++||++++....++..+.+|||.
T Consensus       237 vA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          237 IAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999999865544455555679985

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.6e-43  Score=320.97  Aligned_cols=271  Identities=25%  Similarity=0.388  Sum_probs=213.5

Q ss_pred             CCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH
Q 019551           50 FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        50 ~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      |.+.+| .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.+++++
T Consensus         6 ~~~~~~-~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A            6 WTAADL-PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             CCGGGC-CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHH
T ss_pred             CChhhc-cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHH
Confidence            455544 3589999999999999999999999999999999999998877766554     3578999999999999999


Q ss_pred             HHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +++++    +++|+||||||+..+....+.++|++++++|+.|++.++++++|.|.+     +||++||.+++.+....+
T Consensus        80 ~~~~~----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~  150 (291)
T 3rd5_A           80 FADGV----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLE  150 (291)
T ss_dssp             HHHTC----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSS
T ss_pred             HHHhc----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCcc
Confidence            98876    789999999999876656788999999999999999999999999853     799999998875433222


Q ss_pred             c-cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCC--eEEEEeeCCcccCCCccCcchhHH----HHHhccCC-CHHH
Q 019551          210 L-EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKG--IGFYSMHPGWAETPGVAKSMPSFN----ERFAGNLR-TSEE  281 (339)
Q Consensus       210 ~-~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~-~~~e  281 (339)
                      + .....++++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++.....+...    ..+.++.. +|+|
T Consensus       151 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (291)
T 3rd5_A          151 DLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADF  230 (291)
T ss_dssp             CTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHH
T ss_pred             cccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHH
Confidence            2 12224567889999999999999999999999888  999999999999998765432221    12334444 4999


Q ss_pred             HHHHHHHHhccCCCCCCCccee-eCCCCCCcc--cccccccCCHHHHHHHHHHHHhhhcC
Q 019551          282 GADTVLWLALQPKEKLVSGSFY-FDRAEAPKH--LKFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~-~d~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      +|++++||++++   +.+|+++ +|||.....  ........+.+..++||+.++++++.
T Consensus       231 ~A~~~~~l~~~~---~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  287 (291)
T 3rd5_A          231 GARQTLYAASQD---LPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKT  287 (291)
T ss_dssp             HHHHHHHHHHSC---CCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCC---CCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcc
Confidence            999999999863   5677776 588754322  22456778999999999999999863

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-43  Score=315.87  Aligned_cols=235  Identities=24%  Similarity=0.288  Sum_probs=199.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||++|||||++|||+++|++|+++|++|++++++ .+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999765 45666777777654  35788999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|++   +++||++||..+..           
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~-----------  171 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAEL-----------  171 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTC-----------
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhcc-----------
Confidence            99999999999998765543  688999999999999999999999999863   58999999976653           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----HHHhccCCCHHHHHHHHHHHh
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----ERFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~e~A~~v~~l~  290 (339)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    ..+.+++.+|+|+|++++||+
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          172 VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            2357789999999999999999999999999999999999999998764322111    123567889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....++..+.+|||.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            866665556666789984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.3e-44  Score=319.34  Aligned_cols=233  Identities=23%  Similarity=0.227  Sum_probs=191.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++||++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            679999999999999999999999999999988 45666777777776654  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|++   +|+||++||..+..            
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~------------  167 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGL------------  167 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhcc------------
Confidence            9999999999999765543  678999999999999999999999999964   48999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHH-----HHhccCCCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNE-----RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-----~~~~~~~~~~e~A~~v~~l  289 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...... +..+     .+.+++.+|+|+|++++||
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  247 (267)
T 3u5t_A          168 LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFL  247 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999999998754321 1111     1346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....++..+.+|||.
T Consensus       248 ~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          248 AGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HSTTTTTCCSEEEEESSSC
T ss_pred             hCccccCccCCEEEeCCCc
Confidence            9865555555556679984

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-43  Score=316.21  Aligned_cols=246  Identities=22%  Similarity=0.330  Sum_probs=201.8

Q ss_pred             CCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           49 NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        49 ~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      +..+.+...++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|+++++
T Consensus         9 ~~~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~   87 (267)
T 1vl8_A            9 HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVK   87 (267)
T ss_dssp             --------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHH
Confidence            3444455567899999999999999999999999999999999999988888877773333 246888999999999999


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc-ccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG-MYTAH  205 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~-~~~~~  205 (339)
                      ++++++.+.++++|+||||||+.....  ..+.++|++++++|+.|++.++++++|.|+++ +.++||++||.+ +.   
T Consensus        88 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~---  163 (267)
T 1vl8_A           88 KLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEE---  163 (267)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCcchhc---
Confidence            999999999999999999999876543  36789999999999999999999999999876 578999999987 55   


Q ss_pred             cCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCC
Q 019551          206 LTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRT  278 (339)
Q Consensus       206 ~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~  278 (339)
                               .+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....  +.....     +.+++.+
T Consensus       164 ---------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~  234 (267)
T 1vl8_A          164 ---------VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGV  234 (267)
T ss_dssp             ---------CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBC
T ss_pred             ---------cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcC
Confidence                     245678899999999999999999999999999999999999999865322  111111     2456889


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|+.++||++++....++..+.+|||.
T Consensus       235 p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          235 PEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            999999999999865444445555679984

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.4e-43  Score=323.60  Aligned_cols=238  Identities=18%  Similarity=0.264  Sum_probs=201.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS------------KEKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.  +.++.++.+|++|+
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDL  119 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            35889999999999999999999999999999999886            56666666666554  35789999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      ++++++++++.+.++++|+||||||+.....  ..+.++|++.+++|+.|+++++++++|.|.+++.+|+||++||..+.
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            9999999999999999999999999876544  36889999999999999999999999999887557999999999887


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------------chhHH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------------MPSFN  269 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------------~~~~~  269 (339)
                      .            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....             ..+..
T Consensus       200 ~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (317)
T 3oec_A          200 R------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDA  267 (317)
T ss_dssp             S------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHH
T ss_pred             C------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHH
Confidence            3            4678899999999999999999999999999999999999999875321             00111


Q ss_pred             HHH-------hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          270 ERF-------AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       270 ~~~-------~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ...       ..++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       268 ~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          268 AELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             HHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence            110       145679999999999999876555556666789985

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=317.42  Aligned_cols=236  Identities=21%  Similarity=0.258  Sum_probs=200.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999998888888777654  34688999999999999999999999


Q ss_pred             CCCCccEEEEccccc-cCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVL-ENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~-~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .++++|+||||||+. ....  ..+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..+..          
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~----------  149 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVK----------  149 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHS----------
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcc----------
Confidence            999999999999986 3322  36889999999999999999999999999877 579999999988773          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------------c---hh-HHH-----HH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------------M---PS-FNE-----RF  272 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------------~---~~-~~~-----~~  272 (339)
                        +.++...|++||+++++|+++++.|++++||+||+|+||+++|++....            .   ++ ..+     .+
T Consensus       150 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (262)
T 1zem_A          150 --GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP  227 (262)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC
Confidence              4567889999999999999999999999999999999999999985431            1   11 111     13


Q ss_pred             hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          273 AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      .+++.+|+|+|+.++||+++.....++..+.+|||
T Consensus       228 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          228 MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            46788999999999999986555445555567886

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.7e-43  Score=311.02  Aligned_cols=235  Identities=21%  Similarity=0.303  Sum_probs=200.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|+++||||++|||+++|++|+++|++|++++| +++++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 888888777777654  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------  146 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVT------------  146 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCHHhcC------------
Confidence            999999999999876443  36789999999999999999999999999877 569999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+.....     +.+++.+|+|+|+.++||+
T Consensus       147 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  226 (246)
T 2uvd_A          147 GNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFA  226 (246)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            34677899999999999999999999999999999999999999875432222211     3457889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|||.
T Consensus       227 s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          227 SDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CchhcCCCCCEEEECcCc
Confidence            865444455555679884

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-43  Score=317.88  Aligned_cols=234  Identities=23%  Similarity=0.330  Sum_probs=198.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++...  +.++.++.+|++|.++++++.+.+ +.
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~-~~  103 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEEL-AA  103 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHH-HH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH-Hh
Confidence            5889999999999999999999999999999999976 5566677777654  357899999999999999995554 45


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.|+||++||..+..            
T Consensus       104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~------------  170 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQ------------  170 (273)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------
T ss_pred             cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchHhcC------------
Confidence            6899999999999875543  6889999999999999999999999999887 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  ++..     ..+.+++.+|+|+|++++|
T Consensus       171 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~  250 (273)
T 3uf0_A          171 GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVF  250 (273)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            46778899999999999999999999999999999999999999865431  1111     1235678999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       251 L~s~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhcCCcCCEEEECcCc
Confidence            99865555555566779984

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-43  Score=315.53  Aligned_cols=233  Identities=20%  Similarity=0.250  Sum_probs=190.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999988888765  3478899999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+......  .+.++|++++++|+.|++.++++++|.|+++ +.|+||++||.++.            .+
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~------------~~  146 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGAL------------SV  146 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------CC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHc------------cc
Confidence            999999999998765543  6889999999999999999999999999887 67999999999887            35


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH----HHHhccCCCHHHHHHHHHHHhcc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN----ERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      .++...|++||+|+++|+++++.|+ + ||+||+|+||+|+|++.........    ........+|+|+|+.++||+++
T Consensus       147 ~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~  224 (264)
T 3tfo_A          147 VPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEA  224 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHS
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence            6788999999999999999999998 4 9999999999999998765432211    11223357999999999999997


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                      +....++...+.+++.
T Consensus       225 ~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          225 PQSVDTTEITIRPTAS  240 (264)
T ss_dssp             CTTEEEEEEEEEECC-
T ss_pred             CccCccceEEEecCcc
Confidence            6665544444556664

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-43  Score=314.57  Aligned_cols=236  Identities=25%  Similarity=0.367  Sum_probs=197.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999998888887777654  346889999999999999999999998


Q ss_pred             C-CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 N-KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~-~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      + +++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||.+++.           
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~-----------  163 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFS-----------  163 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTS-----------
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcC-----------
Confidence            8 89999999999875443  36789999999999999999999999999877 569999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHHH-----HHhccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFNE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~-----~~~~~~~~~~e~A  283 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......      ...+     .+.+++.+|+|+|
T Consensus       164 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  242 (273)
T 1ae1_A          164 -ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVS  242 (273)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence             456788999999999999999999999999999999999999998654221      1111     1346788999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||++++....++..+.+|||.
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCccccCcCCCEEEECCCc
Confidence            9999999865554455556679984

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.9e-44  Score=320.37  Aligned_cols=234  Identities=21%  Similarity=0.242  Sum_probs=195.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-------GETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++.+|++|+++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHH
Confidence            4789999999999999999999999999999999999764       55666666554  35789999999999999999


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++++.+.++++|+||||||+......  .+.++|++++++|+.|++.++++++|+|+++ +.++||++||..+..+.   
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~---  156 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPA---  156 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEEECCCCCCCCHH---
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEEEECChHhcCCC---
Confidence            99999999999999999998765543  6889999999999999999999999999877 57999999998876320   


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCC-cccCCCccCcchhHHHHHhccCCCHHHHHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPG-WAETPGVAKSMPSFNERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~  287 (339)
                             ..++...|++||+|+++|+++++.|++++||+||+|+|| .++|++.....    .....++.+|+|+|++++
T Consensus       157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~----~~~~~~~~~pedvA~~v~  225 (274)
T 3e03_A          157 -------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP----GVDAAACRRPEIMADAAH  225 (274)
T ss_dssp             -------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------CCCGGGSBCTHHHHHHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc----cccccccCCHHHHHHHHH
Confidence                   145678899999999999999999999999999999999 69999863221    112345789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ||+++. ..+++|++++|+|..
T Consensus       226 ~l~s~~-~~~itG~~i~~~g~~  246 (274)
T 3e03_A          226 AVLTRE-AAGFHGQFLIDDEVL  246 (274)
T ss_dssp             HHHTSC-CTTCCSCEEEHHHHH
T ss_pred             HHhCcc-ccccCCeEEEcCcch
Confidence            999854 456778888887743

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-43  Score=310.88  Aligned_cols=226  Identities=17%  Similarity=0.125  Sum_probs=191.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.     .++.++.+|++|+++++++++++.+.++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999999999999998888777762     2588999999999999999999999999


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++  +++||++||..+..            +.
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~------------~~  142 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSSAAQV------------GK  142 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCEECCS------------SC
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHHhcC------------CC
Confidence            9999999999876544  36889999999999999999999999999876  35999999988873            46


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......    ....++.+|+|+|+.++|+++++...+
T Consensus       143 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~~~~pedvA~~v~~l~~~~~~~~  218 (235)
T 3l6e_A          143 ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----VDPSGFMTPEDAAAYMLDALEARSSCH  218 (235)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------CBCHHHHHHHHHHHTCCCSSEE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----CCCcCCCCHHHHHHHHHHHHhCCCCcc
Confidence            7889999999999999999999999999999999999999998654322    234478899999999999999777778


Q ss_pred             CCcceeeCCCC
Q 019551          298 VSGSFYFDRAE  308 (339)
Q Consensus       298 ~~G~~~~d~~~  308 (339)
                      ++|..+.+..+
T Consensus       219 i~~i~~~~~~~  229 (235)
T 3l6e_A          219 VTDLFIGRNEG  229 (235)
T ss_dssp             EEEEEEEECCC
T ss_pred             eeeEEEecCCC
Confidence            88877666554

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.5e-43  Score=313.02  Aligned_cols=236  Identities=23%  Similarity=0.322  Sum_probs=196.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|++++ +++..+++.+..+ .++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-SCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999887 7777777765422 46889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+..            
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------  147 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLV------------  147 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcHHhCc------------
Confidence            999999999999876443  36789999999999999999999999999877 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----------hH------HHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----------SF------NERFAGNLRT  278 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----------~~------~~~~~~~~~~  278 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+           +.      ...+.+++.+
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  227 (260)
T 1x1t_A          148 ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVT  227 (260)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcC
Confidence            456788999999999999999999999999999999999999998654321           11      1113467889


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|+.++||++++....++..+.+|||.
T Consensus       228 p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          228 PEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            999999999999865554555556679884

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.2e-43  Score=312.08  Aligned_cols=237  Identities=19%  Similarity=0.209  Sum_probs=199.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++....++.++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999888888877764433336889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++ +|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++.            
T Consensus        84 ~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------  149 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLR------------  149 (260)
T ss_dssp             TC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------
T ss_pred             cC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcC------------
Confidence            99 999999999865443  36789999999999999999999999999877 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhH-HH-----HHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSF-NE-----RFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~-~~-----~~~~~~~~~  279 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++...          ..+.. ..     .+.+++.+|
T Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  229 (260)
T 2z1n_A          150 PWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKP  229 (260)
T ss_dssp             CCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCH
Confidence            456788999999999999999999999999999999999999998651          11111 11     134567899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+.++||++++....++..+.+|||.
T Consensus       230 ~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          230 EELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999999865554455555679883

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3e-43  Score=312.24  Aligned_cols=234  Identities=21%  Similarity=0.322  Sum_probs=190.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|++ +++++   ++.+.  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999998 66654   33222  3478899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++.          
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~----------  146 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWL----------  146 (249)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGS----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhcc----------
Confidence            99999999999999876543  36889999999999999999999999999877 579999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc-Ccc-h--hHHH---HHhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA-KSM-P--SFNE---RFAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~-~~~-~--~~~~---~~~~~~~~~~e~A~~v  286 (339)
                        +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.. ... .  +..+   .+.+++.+|+|+|+.+
T Consensus       147 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~  224 (249)
T 2ew8_A          147 --KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA  224 (249)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHH
Confidence              45678899999999999999999999999999999999999999865 221 1  1111   1345678999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||++++....++..+.+|||.
T Consensus       225 ~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          225 AFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHcCcccCCCCCcEEEECCCc
Confidence            9999865444444455679884

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.6e-43  Score=312.10  Aligned_cols=238  Identities=20%  Similarity=0.207  Sum_probs=200.8

Q ss_pred             ccCCCEEEEEcCC-CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGAN-AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas-~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|.++++++++++.+
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            4889999999998 599999999999999999999999999999888886653 35799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|++++++++||++||..+..           
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  166 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------  166 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------
Confidence            99999999999998765543  68899999999999999999999999998775679999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHH-----HHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....... ..+     .+.+++.+|+|+|+.++|
T Consensus       167 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~  245 (266)
T 3o38_A          167 -AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAF  245 (266)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence             4677899999999999999999999999999999999999999987654321 111     124678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++....++..+.+|||.
T Consensus       246 l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          246 LASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHSGGGTTCCSCEEEESSCC
T ss_pred             HcCccccCccCCEEEEcCCc
Confidence            99865555555555679874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.9e-43  Score=315.40  Aligned_cols=231  Identities=20%  Similarity=0.180  Sum_probs=186.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.     .++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-----DDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-----SCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999998888777662     46889999999999999999999999


Q ss_pred             CCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+....   ...+.++|++.+++|+.|++.++++++|.|++++ ++|+||++||..+..          
T Consensus       100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------  169 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----------  169 (272)
T ss_dssp             HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS----------
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC----------
Confidence            99999999999986542   2368899999999999999999999999998763 268999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH----HHHHhccCCCHHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF----NERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~e~A~~v~~l  289 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+..    ...+.+++.+|+|+|++++||
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          170 --PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYM  247 (272)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHH
Confidence              46778899999999999999999999999999999999999999876543221    122446788999999999999


Q ss_pred             hccCCCCCCCcceeeC
Q 019551          290 ALQPKEKLVSGSFYFD  305 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d  305 (339)
                      ++.+....+++..+..
T Consensus       248 ~s~~~~~~~~~i~i~~  263 (272)
T 4dyv_A          248 ASLPLDANVQFMTIMA  263 (272)
T ss_dssp             HHSCTTSCCCEEEEEE
T ss_pred             hCCCCcCccceEEEec
Confidence            9987765554443333

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=4.9e-43  Score=314.65  Aligned_cols=236  Identities=22%  Similarity=0.268  Sum_probs=196.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+ ..++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999544 445555555443  35789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..           
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  171 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVASIIGER-----------  171 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH-----------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEechhhcC-----------
Confidence            99999999999999876543  6889999999999999999999999999887 579999999988873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+.....     +.+++.+|+|+|++++||
T Consensus       172 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l  250 (271)
T 4iin_A          172 -GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFL  250 (271)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred             -CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence             45778899999999999999999999999999999999999999876543322221     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++....++..+.+|||.
T Consensus       251 ~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          251 LSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCCCcCCCcCCEEEeCCCe
Confidence            9866555556666679984

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.8e-43  Score=312.78  Aligned_cols=238  Identities=21%  Similarity=0.295  Sum_probs=202.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..+ .++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888888777765432 4688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++.           
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  149 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNASICAVQ-----------  149 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcC-----------
Confidence            9999999999999876443  36789999999999999999999999999877 579999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----------hHHH------HHhccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----------SFNE------RFAGNLR  277 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----------~~~~------~~~~~~~  277 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++||+.....+           +...      .+.+++.
T Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  228 (263)
T 3ai3_A          150 -PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA  228 (263)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCB
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCc
Confidence             356778999999999999999999999999999999999999997543211           1111      2345688


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||++++....++..+.+|||.
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            9999999999999865544455556779885

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-43  Score=311.28  Aligned_cols=237  Identities=19%  Similarity=0.240  Sum_probs=202.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ...++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++.+.  +.++.++.+|++|.++++++++++.
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHHH
Confidence            347899999999999999999999999999999988 7777777777777654  3478899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..+..          
T Consensus        87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~----------  155 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQK----------  155 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCGGG----------
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcc----------
Confidence            99999999999999886554  36889999999999999999999999999887 569999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...+.     +.+++.+|+|+|+.++|
T Consensus       156 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          156 --GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAW  233 (256)
T ss_dssp             --SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             --CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              45778899999999999999999999999999999999999999876654443332     34678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       234 l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCcccCCcCcEEEECCCE
Confidence            99865554555556679884

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-42  Score=307.44  Aligned_cols=230  Identities=22%  Similarity=0.256  Sum_probs=195.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++       .+.++.+|++|+++++++++++.+.+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999988776655433       26788999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.++|++++++|+.+++.++++++|.|+++ +.++||++||.+ ..            +
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~-~~------------~  141 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRV-YL------------G  141 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGG-GG------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEccch-hc------------C
Confidence            99999999999876543  26789999999999999999999999999876 579999999988 42            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+...+.     +.+++.+|+|+|+.++||++
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s  221 (245)
T 1uls_A          142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLS  221 (245)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhC
Confidence            4677899999999999999999999999999999999999999876433222221     34678899999999999998


Q ss_pred             cCCCCCCCcceeeCCCCC
Q 019551          292 QPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~  309 (339)
                      ++....++..+.+|||..
T Consensus       222 ~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          222 DESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             chhcCCcCCEEEECCCcc
Confidence            655444555556799853

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-43  Score=319.04  Aligned_cols=245  Identities=19%  Similarity=0.189  Sum_probs=200.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS------------KEKGETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++.+|++|.+
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRA   84 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHH
Confidence            5889999999999999999999999999999999998            56666666666544  457999999999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH  205 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~  205 (339)
                      +++++++++.+.++++|+||||||+.......+.++|++.+++|+.|++.++++++|+|.   +.++||++||..+..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC---TTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh---cCcEEEEeccchhcccc
Confidence            999999999999999999999999987654478899999999999999999999999983   46899999998877532


Q ss_pred             cCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHH---HH
Q 019551          206 LTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFN---ER  271 (339)
Q Consensus       206 ~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~---~~  271 (339)
                      ...+. ....+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....           +...   ..
T Consensus       162 ~~~~~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T 3pxx_A          162 AQPPG-AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA  240 (287)
T ss_dssp             HCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ccccc-ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence            11110 111233678899999999999999999999999999999999999999875321           0110   00


Q ss_pred             ------HhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          272 ------FAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       272 ------~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                            ..+++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       241 ~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             GGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence                  0156789999999999999976665566667789985

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1e-42  Score=310.70  Aligned_cols=235  Identities=24%  Similarity=0.327  Sum_probs=191.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|.++++++++++.+.
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999999888777665     346889999999999999999999999


Q ss_pred             CCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC---CCCEEEEEcCccccccccCcccc
Q 019551          138 NKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAA---PDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      ++++|+||||||+... ..  ..+.++|++.+++|+.+++.++++++|+|.+++   ..++||++||..+.         
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~---------  151 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG---------  151 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT---------
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc---------
Confidence            9999999999998753 22  258899999999999999999999999998752   26789999998877         


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----HH-----HHHhccCCCHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----FN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~-----~~~~~~~~~~~e~  282 (339)
                         .+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.......    ..     ..+.+++.+|+|+
T Consensus       152 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  228 (261)
T 3n74_A          152 ---RPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDL  228 (261)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHH
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHH
Confidence               34677889999999999999999999999999999999999999987654221    11     1134678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |++++||+++.....++..+.+|||..
T Consensus       229 a~~~~~l~s~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          229 AEAAAFLCSPQASMITGVALDVDGGRS  255 (261)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHcCCcccCcCCcEEEecCCcc
Confidence            999999998655555555566799853

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.7e-42  Score=307.05  Aligned_cols=232  Identities=22%  Similarity=0.278  Sum_probs=197.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999888888887654  347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.|++.++++++|+|.++ + |+||++||.++..            
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~------------  147 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSIAGRV------------  147 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTC------------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccHHhcC------------
Confidence            999999999999876443  36889999999999999999999999999877 4 9999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHH---HHhccC--CCHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNE---RFAGNL--RTSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~---~~~~~~--~~~~e~A~~v~~l  289 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....... ...   ...+++  .+|+|+|+.++||
T Consensus       148 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l  227 (247)
T 2jah_A          148 NVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYA  227 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999999986543211 111   111455  8999999999999


Q ss_pred             hccCCCCCCCcceeeCC
Q 019551          290 ALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~  306 (339)
                      ++++. .++.+.+.+++
T Consensus       228 ~s~~~-~~~~~~i~i~~  243 (247)
T 2jah_A          228 VTAPH-HATVHEIFIRP  243 (247)
T ss_dssp             HHSCT-TEEEEEEEEEE
T ss_pred             hCCCc-cCccceEEecC
Confidence            98644 45556666653

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=6.9e-43  Score=312.83  Aligned_cols=233  Identities=20%  Similarity=0.235  Sum_probs=195.0

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |..++.+|++|||||++|||+++|++|+++|++|++++|+.+++++.        ...++.++.+|++|.++++++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHH
Confidence            44457899999999999999999999999999999999997765432        1236889999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+.++++|+||||||+......  .+.++|++++++|+.|++.++++++|.|+++ +.|+||++||.++.          
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~----------  150 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSIAGK----------  150 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGT----------
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhC----------
Confidence            9999999999999998765443  6789999999999999999999999999887 67999999999887          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-------HHHhccCCCHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-------ERFAGNLRTSEEGADT  285 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~e~A~~  285 (339)
                        .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........       ..+.+++.+|+|+|++
T Consensus       151 --~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~a  228 (266)
T 3p19_A          151 --KTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARA  228 (266)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHH
T ss_pred             --CCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHH
Confidence              3467789999999999999999999999999999999999999998765432111       1256778999999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||++++....+++..+.+.++
T Consensus       229 v~~l~~~~~~~~~~~i~i~p~~~  251 (266)
T 3p19_A          229 VLFAYQQPQNVCIREIALAPTKQ  251 (266)
T ss_dssp             HHHHHHSCTTEEEEEEEEEETTC
T ss_pred             HHHHHcCCCCccceeeEEecCCC
Confidence            99999977665544444445443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1e-42  Score=310.37  Aligned_cols=234  Identities=20%  Similarity=0.224  Sum_probs=198.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK--GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|++|||||++|||+++|++|+++|++|++++|+.++  +++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999887  77777777654  3478899999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|++++.+++||++||..+..            +
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~  147 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ------------G  147 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc------------C
Confidence            99999999999876543  368899999999999999999999999998773338999999988763            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHHH-----HhccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNER-----FAGNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~~-----~~~~~~~~~  280 (339)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.....           +...+.     +.+++.+|+
T Consensus       148 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  227 (258)
T 3a28_C          148 FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH
Confidence            5678899999999999999999999999999999999999999754311           111111     345688999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||++++....++..+.+|||.
T Consensus       228 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          228 DVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            9999999999865555555556679984

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2e-43  Score=317.86  Aligned_cols=256  Identities=16%  Similarity=0.165  Sum_probs=210.0

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            3679999999999  99999999999999999999999986 5555666655443  36788999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLEN----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+...    ..  ..+.++|++.+++|+.+++.++++++|.|++   +++||++||.++..      
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~------  150 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTK------  150 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS------
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcC------
Confidence            999999999999998753    22  3688999999999999999999999999863   48999999988763      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  +....     .+.+++.+|+|+
T Consensus       151 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv  224 (275)
T 2pd4_A          151 ------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEV  224 (275)
T ss_dssp             ------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHH
Confidence                  35677899999999999999999999999999999999999999865432  11111     234678899999


Q ss_pred             HHHHHHHhccCCCCCCCcc-eeeCCCCCCcccccccccCCHHHHHHHHHHHHh
Q 019551          283 ADTVLWLALQPKEKLVSGS-FYFDRAEAPKHLKFAATAASHARIDPIVDVLRS  334 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~-~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  334 (339)
                      |+.++||+++... +.+|. +.+|||....  .......+++..++||+.+++
T Consensus       225 a~~~~~l~s~~~~-~~tG~~~~vdgg~~~~--~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          225 GNAGMYLLSSLSS-GVSGEVHFVDAGYHVM--GMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             HHHHHHHHSGGGT-TCCSCEEEESTTGGGB--SSCCCTTCTTTTCCHHHHSSC
T ss_pred             HHHHHHHhCcccc-CCCCCEEEECCCcccC--CCChhhcCcccchhhhhhhcc
Confidence            9999999985444 44555 5579885321  123455777888999998875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.9e-43  Score=313.35  Aligned_cols=236  Identities=18%  Similarity=0.220  Sum_probs=198.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|.++++++++++.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999998 5555556555555443  35789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..           
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  167 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVNGSR-----------  167 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH-----------
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCChhhcc-----------
Confidence            9999999999999876544  36889999999999999999999999999887 579999999988873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH------HHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE------RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~e~A~~v~~  288 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+....      .+.+++.+|+|+|+.++|
T Consensus       168 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          168 -GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHH
Confidence             4577899999999999999999999999999999999999999987654332211      234667899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++....++..+.+|||.
T Consensus       247 L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTS
T ss_pred             HhCCCcCCeeCcEEEECCCE
Confidence            99866555555566789984

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.3e-42  Score=315.10  Aligned_cols=236  Identities=18%  Similarity=0.174  Sum_probs=198.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHH-----------
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSIT-----------  125 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-----------  125 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++....+ .++.++.+|++|.+           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCccccccccccccc
Confidence            47899999999999999999999999999999999 999888888888763333 47899999999999           


Q ss_pred             ------HHHHHHHHHhcCCCCccEEEEccccccCCCC--CC--------------hhhhhhhhhhhhhHHHHHHHHHHHH
Q 019551          126 ------EIKSFANRFSLKNKPVHVLVNNAGVLENNRL--IT--------------SEGFELNFAVNVLGTYTITESMVPL  183 (339)
Q Consensus       126 ------~v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~--------------~~~~~~~~~vN~~~~~~l~~~~l~~  183 (339)
                            +++++++++.+.++++|+||||||+......  .+              .++|++++++|+.+++.++++++|+
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  9999999999999999999999998764432  45              7899999999999999999999999


Q ss_pred             HHhhCC-----CCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccC
Q 019551          184 LEKAAP-----DARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET  258 (339)
Q Consensus       184 m~~~~~-----~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T  258 (339)
                      |++++.     .++||++||..+..            +.++...|++||+++++|+++++.|++++||+||+|+||+|+|
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  232 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  232 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcC------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccC
Confidence            987621     68999999998873            4677889999999999999999999999999999999999999


Q ss_pred             CCccCcchhHHHH-----Hhc-cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          259 PGVAKSMPSFNER-----FAG-NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       259 ~~~~~~~~~~~~~-----~~~-~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++ . ..+.....     +.+ ++.+|+|+|++++||++++....++..+.+|||.
T Consensus       233 ~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          233 VD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             GG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             Cc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            98 4 21222221     234 7889999999999999865544444455679984

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.7e-43  Score=311.80  Aligned_cols=228  Identities=18%  Similarity=0.236  Sum_probs=186.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++..   +++     +.++.++.+|++|+++++++++.+.+ 
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999765432   222     34789999999999999999998877 


Q ss_pred             CCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-------CCCCEEEEEcCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKA-------APDARVITVSSGGMYTA  204 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-------~~~~~Iv~vsS~~~~~~  204 (339)
                      ++++|+||||||+....      ...+.++|++.+++|+.+++.++++++|+|.+.       .+.|+||++||..+.  
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--  154 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF--  154 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC----
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc--
Confidence            89999999999986532      236889999999999999999999999999872       357899999999887  


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-----h-ccCCC
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----A-GNLRT  278 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-----~-~~~~~  278 (339)
                                .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+...+..     . +++.+
T Consensus       155 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~  224 (257)
T 3tl3_A          155 ----------DGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGN  224 (257)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBC
T ss_pred             ----------CCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccC
Confidence                      3467889999999999999999999999999999999999999999876544333222     2 67889


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|+.++||+++  ...++..+.+|||.
T Consensus       225 p~dva~~v~~l~s~--~~itG~~i~vdGG~  252 (257)
T 3tl3_A          225 PDEYGALAVHIIEN--PMLNGEVIRLDGAI  252 (257)
T ss_dssp             HHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhcC--CCCCCCEEEECCCc
Confidence            99999999999985  34445556679985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2e-42  Score=308.75  Aligned_cols=236  Identities=27%  Similarity=0.351  Sum_probs=201.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999888887777654  347889999999999999999999998


Q ss_pred             C-CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 N-KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~-~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      + +++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..           
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  151 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGAL-----------  151 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTS-----------
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcc-----------
Confidence            8 89999999999876443  36789999999999999999999999999876 569999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH--------HHhccCCCHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE--------RFAGNLRTSEEGAD  284 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~--------~~~~~~~~~~e~A~  284 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....  +...+        .+.+++.+|+|+|+
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  230 (260)
T 2ae2_A          152 -AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAA  230 (260)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHH
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHH
Confidence             45677899999999999999999999999999999999999999754321  11111        12356789999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++||++++....++..+.+|||.
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          231 MVAFLCFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHcCccccCCCCCEEEECCCc
Confidence            999999865444455556679984

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-42  Score=308.23  Aligned_cols=234  Identities=23%  Similarity=0.218  Sum_probs=198.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999998888887777654  346889999999999999999999999999


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|++++..++||++||..+..            +.+
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~  147 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------GNP  147 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------CCT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC------------CCC
Confidence            999999999875443  367899999999999999999999999998873368999999988763            456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHHH-----HhccCCCHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNER-----FAGNLRTSEEG  282 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~~-----~~~~~~~~~e~  282 (339)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.....           +...+.     +.+++.+|+|+
T Consensus       148 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  227 (256)
T 1geg_A          148 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDV  227 (256)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHH
Confidence            78899999999999999999999999999999999999999754321           111111     23568899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||++++....++..+.+|||.
T Consensus       228 A~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          228 AACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999865554455555679984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-43  Score=321.20  Aligned_cols=234  Identities=20%  Similarity=0.257  Sum_probs=198.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-------hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-------KGETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...  +.++.++.+|++|+++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999999999999999999999987       466667777655  34799999999999999999


Q ss_pred             HHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++++.+.++++|+||||||+.....  ..+.++|++++++|+.|++.++++++|+|+++ +.++||++||..+..+    
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~----  158 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEP----  158 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SSCEEEECCCCCCCSG----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhccC----
Confidence            9999999999999999999986554  36889999999999999999999999999876 5799999999887632    


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCC-cccCCCccCcchhHHHHHhccCCCHHHHHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPG-WAETPGVAKSMPSFNERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~  287 (339)
                             ..++...|++||+|+++|+++++.|++++||+||+|+|| .++|++.......  ..+.+++.+|+|+|++++
T Consensus       159 -------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~--~~~~~r~~~pedvA~~~~  229 (285)
T 3sc4_A          159 -------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG--DEAMARSRKPEVYADAAY  229 (285)
T ss_dssp             -------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS--CCCCTTCBCTHHHHHHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc--cccccCCCCHHHHHHHHH
Confidence                   125668999999999999999999999999999999999 6899875432111  113467889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||++++. ..+++.+.+|++-
T Consensus       230 ~l~s~~~-~~tG~~i~~dgg~  249 (285)
T 3sc4_A          230 VVLNKPS-SYTGNTLLCEDVL  249 (285)
T ss_dssp             HHHTSCT-TCCSCEEEHHHHH
T ss_pred             HHhCCcc-cccceEEEEcCch
Confidence            9998766 5555555557663

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=5.8e-43  Score=312.16  Aligned_cols=237  Identities=22%  Similarity=0.234  Sum_probs=192.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999998 66777777777777654  34788999999999999999999999


Q ss_pred             CCCCccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .++++|+||||||+.. ...  ..+.++|++.+++|+.|+++++++++|+|++   +|+||++||..+..          
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------  149 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRD----------  149 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHH----------
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhcc----------
Confidence            9999999999999763 222  3688999999999999999999999999864   58999999988762          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhH-----HHHHhccCCCHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSF-----NERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~-----~~~~~~~~~~~~e~A~~v~  287 (339)
                       .+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++..... ++.     ...+.+++.+|+|+|++++
T Consensus       150 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~  227 (259)
T 3edm_A          150 -GGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVA  227 (259)
T ss_dssp             -CCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHHHHH
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             135678899999999999999999999886 99999999999999876543 111     1234577889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCCCc
Q 019551          288 WLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      ||+++.....++..+.+|||....
T Consensus       228 ~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          228 FLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             HHcCccccCccCCEEEECCCcCCC
Confidence            999866555555566679996544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5.2e-43  Score=314.13  Aligned_cols=227  Identities=24%  Similarity=0.311  Sum_probs=192.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..            ...+..+.+|++|+++++++++++.+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999987643            12466788999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++++++|+.|++.++++++|+|+++ +.|+||++||..++.           
T Consensus        78 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  145 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYA-----------  145 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhcc-----------
Confidence            99999999999998765543  6889999999999999999999999999887 679999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHH-----HHhccCCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNE-----RFAGNLRT  278 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~-----~~~~~~~~  278 (339)
                       +.++...|++||+|+++|+++++.|+++ ||+||+|+||+|+|++.....           +...+     .+.+++.+
T Consensus       146 -~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  223 (269)
T 3vtz_A          146 -ATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGR  223 (269)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBC
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcC
Confidence             4567889999999999999999999988 999999999999999754321           11111     23467889


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|+|+.++||+++.....++..+.+|||..
T Consensus       224 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          224 PEEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            9999999999998766555555667799854

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-43  Score=316.16  Aligned_cols=234  Identities=22%  Similarity=0.237  Sum_probs=194.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ ..+.++.+|++|+++++++++++.+.
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999988888876543 34688999999999999999999999


Q ss_pred             CCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+....   ...+.++|++.+++|+.|++.++++++|.|++++ ++|+||++||..+.           
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------  177 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ-----------  177 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT-----------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC-----------
Confidence            99999999999986542   2368899999999999999999999999998764 36899999999887           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH----HHHHhccCCCHHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF----NERFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~e~A~~v~~l  289 (339)
                       .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+..    ...+.+++.+|+|+|++++||
T Consensus       178 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL  256 (281)
T 4dry_A          178 -TPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYM  256 (281)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHH
T ss_pred             -CCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHH
Confidence             356788999999999999999999999999999999999999999875432211    111235678999999999999


Q ss_pred             hccCCCCCCCcceee
Q 019551          290 ALQPKEKLVSGSFYF  304 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~  304 (339)
                      ++.+....+++..+.
T Consensus       257 ~s~~~~~~i~~~~i~  271 (281)
T 4dry_A          257 ASLPLSANVLTMTVM  271 (281)
T ss_dssp             HHSCTTEEEEEEEEE
T ss_pred             hCCCccCccccEEEE
Confidence            998777665554444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-42  Score=307.90  Aligned_cols=243  Identities=17%  Similarity=0.187  Sum_probs=196.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.+...+...+..... +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999887665544444443332 35799999999999999999999999


Q ss_pred             CCCCccEEEEcccc--ccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGV--LENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~--~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .++++|+||||||+  .....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||.+....        
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~--------  152 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSA--------  152 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGC--------
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhccc--------
Confidence            99999999999994  33222  36789999999999999999999999999887 6799999999843311        


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~~v~  287 (339)
                        .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+....     .+.+++.+|+|+|+.++
T Consensus       153 --~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  230 (264)
T 3i4f_A          153 --PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTIS  230 (264)
T ss_dssp             --CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHH
T ss_pred             --CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence              24567789999999999999999999999999999999999999987765443222     34567889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCCCc
Q 019551          288 WLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      ||++++....++..+.+|||-...
T Consensus       231 ~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          231 FLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHcCcccCCCCCcEEEEcCceeec
Confidence            999866555555556679986443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.1e-42  Score=314.44  Aligned_cols=234  Identities=13%  Similarity=0.119  Sum_probs=196.9

Q ss_pred             ccCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||+|  |||+++|++|+++|++|++++|+.+..+... ++.+..+  .+.++.+|++|.++++++++++.
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVD-PLAESLG--VKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHHT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-HHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            47899999999997  9999999999999999999999976544443 3333333  36789999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLEN----N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+...    .  ...+.++|++.+++|+.+++.++++++|+|++   +|+||++||.++..      
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~------  174 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEK------  174 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTS------
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhcc------
Confidence            999999999999998753    2  23688999999999999999999999999864   68999999998873      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~-----~~~~~~~~~~~e~  282 (339)
                            +.+++..|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ..     ..+.+++.+|+|+
T Consensus       175 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  248 (296)
T 3k31_A          175 ------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDV  248 (296)
T ss_dssp             ------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHH
Confidence                  4677889999999999999999999999999999999999999987654221  11     1235788999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |++++||+++.....++..+.+|||..
T Consensus       249 A~~v~fL~s~~a~~itG~~i~vdGG~~  275 (296)
T 3k31_A          249 GGAALYLLSDLGRGTTGETVHVDCGYH  275 (296)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCccCCccCCEEEECCCcc
Confidence            999999998655555555667799954

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.7e-42  Score=312.82  Aligned_cols=233  Identities=20%  Similarity=0.255  Sum_probs=193.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999999988877665543     347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC-------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          138 NKPVHVLVNNAGVLENNRL-------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~-------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++++|+||||||+......       .+.++|++++++|+.+++.++++++|+|.++  +++||++||..+..       
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~-------  147 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFY-------  147 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS-------
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhcc-------
Confidence            9999999999998654321       2346799999999999999999999999876  48999999998873       


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----------hHHH-----HHhcc
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----------SFNE-----RFAGN  275 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~-----~~~~~  275 (339)
                           +.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++......          ...+     .+.++
T Consensus       148 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  221 (281)
T 3zv4_A          148 -----PNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGR  221 (281)
T ss_dssp             -----SSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSS
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCC
Confidence                 46778899999999999999999999987 999999999999998643210          0111     13578


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcc-eeeCCCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGS-FYFDRAEAP  310 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~-~~~d~~~~~  310 (339)
                      +.+|+|+|++++||++++...+++|+ +.+|||-..
T Consensus       222 ~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          222 MPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             CCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            89999999999999995555555554 567999643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=8.9e-44  Score=317.97  Aligned_cols=237  Identities=15%  Similarity=0.182  Sum_probs=192.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC---chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS---KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+   .+++++..+++...  +.++.++.+|++|+++++++++++
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999998765   44566666776654  457999999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+.++++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|+   +.++||++||..+..+        
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~isS~~~~~~--------  154 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITIATSLLAAY--------  154 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE---EEEEEEEECCCHHHHH--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---CCCEEEEEechhhccC--------
Confidence            9999999999999998876543  68899999999999999999999999984   3589999999887642        


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH------HHHHhccCCCHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF------NERFAGNLRTSEEGADTV  286 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~e~A~~v  286 (339)
                          .++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........      ...+.+++.+|+|+|+++
T Consensus       155 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  230 (262)
T 3ksu_A          155 ----TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPII  230 (262)
T ss_dssp             ----HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHH
Confidence                4556789999999999999999999999999999999999999865432111      112356789999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCCCcc
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEAPKH  312 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~~~~  312 (339)
                      +||+++ ....++..+.+|||...+.
T Consensus       231 ~~L~s~-~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          231 KFLTTD-GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             HHHHTT-TTTCCSCEEEESTTCCCC-
T ss_pred             HHHcCC-CCCccCCEEEECCCccCCC
Confidence            999986 4444444556799976554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=4.2e-42  Score=311.98  Aligned_cols=234  Identities=13%  Similarity=0.145  Sum_probs=192.4

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+++. .+..+++.+..+  ++.++.+|++|.++++++++++.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHH
Confidence            5889999999999  559999999999999999999999543 344445544443  58899999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLEN----N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+...    .  ...+.++|++.+++|+.+++.++++++|+|++   +|+||++||.++..      
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~------  175 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEK------  175 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTS------
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhcc------
Confidence            999999999999998752    2  23688999999999999999999999999964   68999999998873      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH-----HHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~-----~~~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......  ...     ..+.+++.+|+|+
T Consensus       176 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  249 (293)
T 3grk_A          176 ------VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEV  249 (293)
T ss_dssp             ------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHH
Confidence                  467788999999999999999999999999999999999999998654321  111     1235778999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |++++||+++.....++..+.+|||..
T Consensus       250 A~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          250 GDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCccccCCcceEEEECCCcc
Confidence            999999998655555555556799853

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.2e-42  Score=310.14  Aligned_cols=236  Identities=22%  Similarity=0.277  Sum_probs=199.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  + ++.++.+|++|+++++++++++.+.
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888877777532  2 6888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC---CCEEEEEcCccccccccCccccc
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAP---DARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|++++.   .++||++||.++..         
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~---------  173 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS---------  173 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC---------
Confidence            999999999999876543  3678999999999999999999999999987632   28999999988763         


Q ss_pred             cCCCCcchH-HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----HH---HHHhccCCCHHHHHH
Q 019551          213 NSGSFDGME-QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----FN---ERFAGNLRTSEEGAD  284 (339)
Q Consensus       213 ~~~~~~~~~-~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~---~~~~~~~~~~~e~A~  284 (339)
                         +.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++.....+.    ..   ..+.+++.+|+|+|+
T Consensus       174 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  250 (276)
T 2b4q_A          174 ---AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAA  250 (276)
T ss_dssp             ---CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHH
T ss_pred             ---CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHH
Confidence               345556 8999999999999999999999999999999999999986542211    11   113467889999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++||++++....++..+.+|||.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            999999865544445555679884

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.4e-42  Score=309.80  Aligned_cols=229  Identities=17%  Similarity=0.180  Sum_probs=186.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++.+..++.       .+.++.+|++|+++++++++++.+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCeEEECCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988764443332       367899999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          137 KNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      .++++|+||||||+..... ..+.++|++.+++|+.|+++++++++|+|+++ +.++||++||..+..            
T Consensus        96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------  162 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVTRK------------  162 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGT------------
T ss_pred             hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcC------------
Confidence            9999999999999876543 35678899999999999999999999999876 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--h-HHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--S-FNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~-~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      +.++...|++||+|+++|+++++.|+++ +|+||+|+||+++|++......  . ....+.+++.+|+|+|++++||+. 
T Consensus       163 ~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~-  240 (260)
T 3gem_A          163 GSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD-  240 (260)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHH-
T ss_pred             CCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh-
Confidence            4677889999999999999999999998 7999999999999987542211  1 112235678899999999999983 


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                       ....++..+.+|||.
T Consensus       241 -~~~itG~~i~vdGG~  255 (260)
T 3gem_A          241 -STYVTGTTLTVNGGR  255 (260)
T ss_dssp             -CSSCCSCEEEESTTT
T ss_pred             -CCCCCCCEEEECCCc
Confidence             334445556779985

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.2e-42  Score=307.10  Aligned_cols=233  Identities=25%  Similarity=0.269  Sum_probs=192.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999888888765  34789999999999999999999999


Q ss_pred             CCCCccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .++++|+||||||+.. ...  ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||.++..          
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~----------  171 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKN----------  171 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSSCSSC----------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEechhhcC----------
Confidence            9999999999999843 222  36889999999999999999999999999877 579999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......   .....++.+|+|+|+.++||++++
T Consensus       172 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~p~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          172 --PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA---KKSALGAIEPDDIADVVALLATQA  246 (262)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------CCCHHHHHHHHHHHHTCC
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc---ccccccCCCHHHHHHHHHHHhcCc
Confidence              467788999999999999999999999999999999999999998654322   223456789999999999999976


Q ss_pred             CCCCCCcceeeCCC
Q 019551          294 KEKLVSGSFYFDRA  307 (339)
Q Consensus       294 ~~~~~~G~~~~d~~  307 (339)
                      ...++++.++.+.+
T Consensus       247 ~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          247 DQSFISEVLVRPTL  260 (262)
T ss_dssp             TTCCEEEEEEECCC
T ss_pred             cccccCcEEecccc
Confidence            66555444444544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=6.9e-43  Score=316.86  Aligned_cols=235  Identities=22%  Similarity=0.270  Sum_probs=197.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++..+...+..+.. +.++.++.+|++|+++++++++++.+.
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999875444443333332 357899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+.....   ..+.++|++.+++|+.|++.++++++|+|++   +++||++||..++.           
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----------  188 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYE-----------  188 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHH-----------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcC-----------
Confidence            999999999999875432   2588999999999999999999999999853   58999999998874           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHH-----HHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....... ...     .+.+++.+|+|+|++++|
T Consensus       189 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  267 (291)
T 3ijr_A          189 -GNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY  267 (291)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHH
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence             4567889999999999999999999999999999999999999986443221 111     134678899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++.....++..+.+|||.
T Consensus       268 L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          268 LASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             HHSGGGTTCCSCEEEESSSC
T ss_pred             HhCCccCCCcCCEEEECCCc
Confidence            99876555555566779985

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.1e-42  Score=308.99  Aligned_cols=233  Identities=23%  Similarity=0.252  Sum_probs=174.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999988888765  347899999999999999999999999


Q ss_pred             CCCccEEEEcccccc---CC--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          138 NKPVHVLVNNAGVLE---NN--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       138 ~~~id~lInnAG~~~---~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      ++++|+||||||+..   ..  ...+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++          
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~----------  152 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAW----------  152 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCcccc----------
Confidence            999999999999843   21  236889999999999999999999999999887 57999999998775          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-H-----HHHHhccCCCHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-F-----NERFAGNLRTSEEGADTV  286 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~-----~~~~~~~~~~~~e~A~~v  286 (339)
                           ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+. .     ...+.+++.+|+|+|+++
T Consensus       153 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          153 -----LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence                 34567999999999999999999999999999999999999986544321 1     112346678999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+++.....++..|.+|||.
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC----
T ss_pred             HHHcCccccCCCCCEEEECCCe
Confidence            9999865555555566679885

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.1e-42  Score=312.81  Aligned_cols=253  Identities=17%  Similarity=0.198  Sum_probs=195.9

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|.++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999985 4555566655443  36788999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLEN----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+...    ..  ..+.++|++.+++|+.|++.++++++|.|.++  +++||++||.++..      
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~------  166 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEK------  166 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTS------
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhcc------
Confidence            999999999999998753    22  36789999999999999999999999999754  58999999988763      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  +....     .+.+++.+|+|+
T Consensus       167 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  240 (285)
T 2p91_A          167 ------VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDV  240 (285)
T ss_dssp             ------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHH
Confidence                  35667899999999999999999999999999999999999999865421  11111     134668899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCCCcccccccccCCHHHHHHHHHH
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDV  331 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~  331 (339)
                      |++++||+++.....++..+.+|||....    .....+++..++||+.
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~~~----~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYHIM----GVFGREEEIKKEVYGD  285 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB----SCC-------------
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcccc----cccCChHHHHHHhcCC
Confidence            99999999855444444456679985322    3356777888999973

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1e-42  Score=309.73  Aligned_cols=232  Identities=19%  Similarity=0.233  Sum_probs=196.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|+++++++++++.+.+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999988777665554     2468889999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            +
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  144 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLM------------G  144 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhcc------------C
Confidence            99999999999876443  36789999999999999999999999999877 579999999998773            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----H-HHHHhccCC-CHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----F-NERFAGNLR-TSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~-~~~~~~~~~-~~~e~A~~v~~l~  290 (339)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+.    . ...+.+++. +|+|+|+.++||+
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~  224 (254)
T 1hdc_A          145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence            567889999999999999999999999999999999999999875321110    0 011345677 9999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|||.
T Consensus       225 s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          225 SDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CchhcCCCCCEEEECCCc
Confidence            865544455555679985

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.1e-42  Score=312.14  Aligned_cols=237  Identities=19%  Similarity=0.213  Sum_probs=195.4

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCC----HHHHHHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSS----ITEIKSFA  131 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~----~~~v~~~~  131 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+. +++++..+++.... +.++.++.+|++|    .+++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHHH
Confidence            358899999999999999999999999999999999998 88888877776333 3578899999999    99999999


Q ss_pred             HHHhcCCCCccEEEEccccccCCCC------------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-----CCEEE
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRL------------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-----DARVI  194 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~------------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-----~~~Iv  194 (339)
                      +++.+.++++|+||||||+......            .+.++|++.+++|+.+++.+++.++|.|.+++.     .++||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            9999999999999999998764433            566889999999999999999999999977521     68999


Q ss_pred             EEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH---
Q 019551          195 TVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER---  271 (339)
Q Consensus       195 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---  271 (339)
                      ++||.++..            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++ . ..+.....   
T Consensus       178 ~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~~~  243 (288)
T 2x9g_A          178 NLCDAMVDQ------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKDKWRR  243 (288)
T ss_dssp             EECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHHHHHH
T ss_pred             EEecccccC------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHHHHHh
Confidence            999998873            467788999999999999999999999999999999999999998 3 22221111   


Q ss_pred             --HhccC-CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          272 --FAGNL-RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       272 --~~~~~-~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                        +.+++ .+|+|+|++++||+++.....++..+.+|||.
T Consensus       244 ~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          244 KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence              34567 89999999999999865444444445579984

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2.9e-42  Score=307.81  Aligned_cols=235  Identities=21%  Similarity=0.261  Sum_probs=197.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988777666653     2478899999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..++.           
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  145 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLA-----------  145 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcC-----------
Confidence            9999999999999876443  36789999999999999999999999999877 579999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+.....+.+++.+|+|+|+.++||++++.
T Consensus       146 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~  224 (260)
T 1nff_A          146 -GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDES  224 (260)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCccc
Confidence             3567789999999999999999999999999999999999999975411010001134567899999999999998654


Q ss_pred             CCCCCcceeeCCCCC
Q 019551          295 EKLVSGSFYFDRAEA  309 (339)
Q Consensus       295 ~~~~~G~~~~d~~~~  309 (339)
                      ...++..+.+|||..
T Consensus       225 ~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          225 SYSTGAEFVVDGGTV  239 (260)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             cCCcCCEEEECCCee
Confidence            444455566799853

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=6e-42  Score=315.66  Aligned_cols=236  Identities=18%  Similarity=0.174  Sum_probs=198.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHH-----------
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSIT-----------  125 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-----------  125 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++....+ .++.++.+|++|.+           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCchhcccccccccc
Confidence            37899999999999999999999999999999999 999888888888763333 47899999999999           


Q ss_pred             ------HHHHHHHHHhcCCCCccEEEEccccccCCCC--CC--------------hhhhhhhhhhhhhHHHHHHHHHHHH
Q 019551          126 ------EIKSFANRFSLKNKPVHVLVNNAGVLENNRL--IT--------------SEGFELNFAVNVLGTYTITESMVPL  183 (339)
Q Consensus       126 ------~v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~--------------~~~~~~~~~vN~~~~~~l~~~~l~~  183 (339)
                            +++++++++.+.++++|+||||||+......  .+              .++|++.+++|+.+++.++++++|.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999998764432  45              7899999999999999999999999


Q ss_pred             HHhhCC-----CCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccC
Q 019551          184 LEKAAP-----DARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET  258 (339)
Q Consensus       184 m~~~~~-----~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T  258 (339)
                      |.+++.     .++||++||..+..            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T  269 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  269 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             HHhcCCcCCCCCcEEEEECchhhcc------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence            987621     68999999998773            4577889999999999999999999999999999999999999


Q ss_pred             CCccCcchhHHHH-----Hhc-cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          259 PGVAKSMPSFNER-----FAG-NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       259 ~~~~~~~~~~~~~-----~~~-~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++ .. .+...+.     +.+ ++.+|+|+|++++||+++.....++..+.+|||.
T Consensus       270 ~~-~~-~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          270 VD-DM-PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             CC-CS-CHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             Cc-cc-cHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            98 33 2322222     234 7789999999999999865444444455679984

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=5.7e-42  Score=308.72  Aligned_cols=236  Identities=23%  Similarity=0.311  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777654  346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHH--HHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPL--LEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~--m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.  |+++ +.++||++||.++..          
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-~~g~iv~isS~~~~~----------  165 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQ----------  165 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-TEEEEEEECCGGGTS----------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-CCeEEEEECcccccc----------
Confidence            999999999999876443  3678999999999999999999999999  8776 568999999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHH-----HHhccCC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNE-----RFAGNLR  277 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~-----~~~~~~~  277 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....           ++...     .+.+++.
T Consensus       166 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  243 (277)
T 2rhc_B          166 --GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYV  243 (277)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCB
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCc
Confidence              45678899999999999999999999999999999999999999754321           11111     1345788


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||++++....++..+.+|||.
T Consensus       244 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          244 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            9999999999999865554455556679884

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=7.9e-43  Score=312.42  Aligned_cols=225  Identities=24%  Similarity=0.283  Sum_probs=191.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++             ....+.+|++|.++++++++++.+.
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            588999999999999999999999999999999999876422             1234579999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..            
T Consensus        92 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------  158 (266)
T 3uxy_A           92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLR------------  158 (266)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTB------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCC------------
Confidence            999999999999987554  36889999999999999999999999999887 679999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------HHHH-----HhccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------FNER-----FAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~-----~~~~~~~~~e~A  283 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......       ....     +.+++.+|+|+|
T Consensus       159 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  238 (266)
T 3uxy_A          159 PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIA  238 (266)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHH
Confidence            4677899999999999999999999999999999999999999976432111       1111     246788999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++||+++.....++..+.+|||.
T Consensus       239 ~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          239 DVVLFLASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhCchhcCCcCCEEEECcCE
Confidence            9999999866555555556779985

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=6.2e-42  Score=305.57  Aligned_cols=236  Identities=23%  Similarity=0.282  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999998888887777654  346888999999999999999999999


Q ss_pred             CCCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+... .  ...+.++|++.+++|+.+++.++++++|.|+++ +.++||++||.+++.           
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  156 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYH-----------  156 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS-----------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhcC-----------
Confidence            9999999999998642 2  236789999999999999999999999999876 578999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhH-----HHHHhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSF-----NERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~-----~~~~~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....  +..     ...+.+++.+|+|+|+.++
T Consensus       157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~  235 (260)
T 2zat_A          157 -PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVS  235 (260)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence             45678899999999999999999999999999999999999999864311  111     1123467889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||++++....++..+.+|||.
T Consensus       236 ~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          236 FLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHcCcccCCccCCEEEECCCc
Confidence            999865554555567779985

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=8.6e-42  Score=305.85  Aligned_cols=238  Identities=18%  Similarity=0.218  Sum_probs=201.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++.+|++|||||++|||+++|++|+++|++|++ ..|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999966 557777888888887665  3478999999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+......  .+.++|++.+++|+.+++.+++.+++.|.+..+.++||++||..+..          
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------  169 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM----------  169 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH----------
T ss_pred             HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc----------
Confidence            999999999999999876543  68899999999999999999999999997555789999999988874          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH----HHhccCCCHHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE----RFAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~e~A~~v~~l  289 (339)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........    .+.+++.+|+|+|++++||
T Consensus       170 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L  247 (267)
T 4iiu_A          170 --GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYL  247 (267)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              4567889999999999999999999999999999999999999987654221111    1346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....++..+.+|||-
T Consensus       248 ~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          248 MSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCCcccCccCCEEEeCCCc
Confidence            9866555556666779984

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=9.3e-42  Score=305.49  Aligned_cols=239  Identities=17%  Similarity=0.232  Sum_probs=203.7

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+..+ .++.++.+|++|++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG-IKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC-CCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC-CceeEEecCCCCHHHHHHHHHH
Confidence            35899999999999  9999999999999999999999887665 667777766553 5799999999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.+.++++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+..+       
T Consensus        95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~-------  166 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIA-------  166 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC-------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEcccccccc-------
Confidence            99999999999999998875543  5889999999999999999999999999887 5789999999887643       


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                         ...++...|++||+|+++|+++++.|+++. |+||+|+||+++|++.....++....     +.+++.+|+|+|+.+
T Consensus       167 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~  242 (267)
T 3gdg_A          167 ---NFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAY  242 (267)
T ss_dssp             ---CSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHH
T ss_pred             ---CCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHh
Confidence               112467899999999999999999999887 99999999999999876554443333     245677899999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+++.....++..+.+|||.
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTG
T ss_pred             heeecCccccccCCEEEECCce
Confidence            9999865555555566779984

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1e-42  Score=316.23  Aligned_cols=234  Identities=26%  Similarity=0.259  Sum_probs=196.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.  +..++..+.+.+.  +.++.++.+|++|+++++++++++.
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999873  3444455544433  3578999999999999999999999


Q ss_pred             cCCCCccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|+||||||+....   ...+.++|++.+++|+.|+++++++++|+|++   +|+||++||..++.         
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~---------  191 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQ---------  191 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTS---------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhcc---------
Confidence            9999999999999986532   23688999999999999999999999999853   58999999998873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chh-----HHHHHhccCCCHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPS-----FNERFAGNLRTSEEGADT  285 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~-----~~~~~~~~~~~~~e~A~~  285 (339)
                         +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....  .++     ....+.+++.+|+|+|++
T Consensus       192 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  268 (294)
T 3r3s_A          192 ---PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPV  268 (294)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               4677889999999999999999999999999999999999999873211  111     111245778899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||+++.....++..+.+|||.
T Consensus       269 v~~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          269 YVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            99999876665666666789984

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8.5e-42  Score=305.65  Aligned_cols=240  Identities=15%  Similarity=0.175  Sum_probs=200.2

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+..++.++.+|++|.++++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            45889999999999  67999999999999999999999965444 4444444444457899999999999999999999


Q ss_pred             hcCCCCccEEEEccccccC----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          135 SLKNKPVHVLVNNAGVLEN----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      .+.++++|+||||||+...    ..  ..+.++|++.+++|+.+++.++++++|+|++   +++||++||.++..     
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----  153 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGEL-----  153 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTS-----
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccc-----
Confidence            9999999999999998752    22  3688999999999999999999999999863   58999999998873     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEE  281 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e  281 (339)
                             +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......  ....     .+.+++.+|+|
T Consensus       154 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d  226 (266)
T 3oig_A          154 -------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEE  226 (266)
T ss_dssp             -------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             -------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHH
Confidence                   467889999999999999999999999999999999999999998765432  1111     13467889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCCCCcc
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAEAPKH  312 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~~~~~  312 (339)
                      +|+.++||++++....++..+.+|||-....
T Consensus       227 va~~v~~l~s~~~~~~tG~~i~vdGG~~~~~  257 (266)
T 3oig_A          227 VGDTAAFLFSDMSRGITGENLHVDSGFHITA  257 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHcCCchhcCcCCEEEECCCeEEee
Confidence            9999999998655555555566799965443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7e-42  Score=308.57  Aligned_cols=238  Identities=23%  Similarity=0.214  Sum_probs=199.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++..... ..++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999988888777765421 12688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          137 KNKPVHVLVNNAGVLENNR------LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      .++++|+||||||+.....      ..+.++|++.+++|+.+++.++++++|.|.++ + ++||++||..+..       
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~-------  153 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVNVSSIVAGP-------  153 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGSS-------
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEEecCccccC-------
Confidence            9999999999999876543      35788999999999999999999999999877 3 9999999988763       


Q ss_pred             cccCCCC-cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--h-------hHHHH-----Hhcc
Q 019551          211 EFNSGSF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--P-------SFNER-----FAGN  275 (339)
Q Consensus       211 ~~~~~~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~-------~~~~~-----~~~~  275 (339)
                           +. ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  .       +..+.     +.++
T Consensus       154 -----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  228 (280)
T 1xkq_A          154 -----QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA  228 (280)
T ss_dssp             -----SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCC
Confidence                 23 677899999999999999999999999999999999999999865331  1       11111     2456


Q ss_pred             CCCHHHHHHHHHHHhccC-CCCCCCcceeeCCCCC
Q 019551          276 LRTSEEGADTVLWLALQP-KEKLVSGSFYFDRAEA  309 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~-~~~~~~G~~~~d~~~~  309 (339)
                      +.+|+|+|+.++||++++ ....++..+.+|||..
T Consensus       229 ~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          229 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            789999999999999865 4444444556799853

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=7e-42  Score=304.40  Aligned_cols=233  Identities=23%  Similarity=0.288  Sum_probs=195.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+++  ++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999876  4455555443  3468889999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            +
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  144 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLV------------G  144 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCchhcc------------C
Confidence            99999999999875443  35789999999999999999999999999876 569999999998773            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhH---H----HH------HhccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSF---N----ER------FAGNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~---~----~~------~~~~~~~~~  280 (339)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.....   +..   .    ..      +.+++.+|+
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  224 (255)
T 2q2v_A          145 STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE  224 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHH
Confidence            5678899999999999999999999999999999999999999754321   111   1    11      234678999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+.++||++++....++..+.+|||.
T Consensus       225 dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          225 HLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            9999999999865544455556679884

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.4e-42  Score=303.78  Aligned_cols=229  Identities=21%  Similarity=0.251  Sum_probs=191.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ||++|||||++|||+++|++|+++|  ++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999985  78999999998887776655     2478999999999999999999999999


Q ss_pred             CCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +++|+||||||+... .  ...+.++|++.+++|+.|++.++++++|+|+++  +|+||++||..+..            
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~~~~~------------  142 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSDACNM------------  142 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCSCCCC------------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCchhcc------------
Confidence            999999999998643 2  236889999999999999999999999999887  39999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---------hhHH-----HHHhccCCCHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---------PSFN-----ERFAGNLRTSEE  281 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---------~~~~-----~~~~~~~~~~~e  281 (339)
                      +.++...|++||+|+++|+++++.|+  +||+||+|+||+|+|++.....         ++..     ..+.+++.+|+|
T Consensus       143 ~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~d  220 (254)
T 3kzv_A          143 YFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSV  220 (254)
T ss_dssp             SSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCccc
Confidence            46788999999999999999999998  6899999999999999875431         1111     123577899999


Q ss_pred             HHHHHHHHhccCCCCCCCcce-eeCCCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSF-YFDRAEAP  310 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~-~~d~~~~~  310 (339)
                      +|++++||+++....+.+|++ .+||++..
T Consensus       221 va~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          221 PATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            999999999976434555555 46888654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-42  Score=310.48  Aligned_cols=237  Identities=23%  Similarity=0.244  Sum_probs=200.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..+ ..++.++.+|++|+++++++++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888887765421 11688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGVLENNR----LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .++++|+||||||+.....    ..+.++|++.+++|+.|++.++++++|.|.++ + ++||++||.++..         
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~isS~~~~~---------  171 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNVSSIVAGP---------  171 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGGGSS---------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEEcCchhcc---------
Confidence            9999999999999876543    36789999999999999999999999999876 3 9999999988763         


Q ss_pred             cCCCC-cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--h-------hHHHH-----HhccCC
Q 019551          213 NSGSF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--P-------SFNER-----FAGNLR  277 (339)
Q Consensus       213 ~~~~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~-------~~~~~-----~~~~~~  277 (339)
                         +. ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  .       +....     +.+++.
T Consensus       172 ---~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  248 (297)
T 1xhl_A          172 ---QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCG  248 (297)
T ss_dssp             ---SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCB
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCc
Confidence               23 677899999999999999999999999999999999999999865331  1       11111     235678


Q ss_pred             CHHHHHHHHHHHhccC-CCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQP-KEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~-~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|+.++||++++ ....++..+.+|||.
T Consensus       249 ~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~  280 (297)
T 1xhl_A          249 KPEEIANIIVFLADRNLSSYIIGQSIVADGGS  280 (297)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCCcccCCccCcEEEECCCc
Confidence            9999999999999865 444444455679985

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.4e-42  Score=317.69  Aligned_cols=239  Identities=20%  Similarity=0.264  Sum_probs=201.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC----------chhHHHHHHHHHhhcCCccEEEEeccCCCHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS----------KEKGETALSAIRSKTGNENVHLELCDLSSITE  126 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~  126 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...  +.++.++.+|++|.++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQ  100 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHH
Confidence            45889999999999999999999999999999999998          67788888887665  3478999999999999


Q ss_pred             HHHHHHHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEEcCc
Q 019551          127 IKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAA-----PDARVITVSSG  199 (339)
Q Consensus       127 v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----~~~~Iv~vsS~  199 (339)
                      ++++++++.+.++++|+||||||+......  .+.++|++.+++|+.|++.++++++|+|.+..     .+|+||++||.
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            999999999999999999999999876543  68899999999999999999999999997542     13799999998


Q ss_pred             cccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh--ccCC
Q 019551          200 GMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA--GNLR  277 (339)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~  277 (339)
                      .+..            +.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++.............  .+..
T Consensus       181 ~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~  247 (322)
T 3qlj_A          181 AGLQ------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAM  247 (322)
T ss_dssp             HHHH------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTT
T ss_pred             HHcc------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCC
Confidence            8873            456788999999999999999999999999999999999 999987665443222222  2456


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~~  310 (339)
                      +|+|+|++++||+++.....++..+.+|||...
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            899999999999986655555555667998643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.6e-42  Score=318.14  Aligned_cols=231  Identities=22%  Similarity=0.248  Sum_probs=198.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-------GETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++.+|++|+++++++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHH
Confidence            5889999999999999999999999999999999999874       55666666554  35789999999999999999


Q ss_pred             HHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++++.+.++++|+||||||+.....  ..+.++|++++++|+.|+++++++++|+|+++ +.++||++||..+..+    
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~~~~~~----  194 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNLNP----  194 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEEEECCCCCCCG----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHcCC----
Confidence            9999999999999999999876544  36789999999999999999999999999876 6799999999887632    


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCc-ccCCCccCcchhHHHHHhccCCCHHHHHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGW-AETPGVAKSMPSFNERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~  287 (339)
                            ...++...|++||+|+++|+++++.|++ .||+||+|+||+ ++|++......   ..+.+++.+|+|+|++++
T Consensus       195 ------~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~---~~~~~r~~~pedvA~~v~  264 (346)
T 3kvo_A          195 ------VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG---PGIESQCRKVDIIADAAY  264 (346)
T ss_dssp             ------GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC-----CGGGCBCTHHHHHHHH
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc---ccccccCCCHHHHHHHHH
Confidence                  1256788999999999999999999999 999999999995 99986542211   123567889999999999


Q ss_pred             HHhccCCCCCCCcceeeCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ||+++  ..+++|.+++|++
T Consensus       265 ~L~s~--~~~itG~~ivdgg  282 (346)
T 3kvo_A          265 SIFQK--PKSFTGNFVIDEN  282 (346)
T ss_dssp             HHHTS--CTTCCSCEEEHHH
T ss_pred             HHHhc--CCCCCceEEECCc
Confidence            99986  5567888889888

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.2e-42  Score=303.30  Aligned_cols=225  Identities=24%  Similarity=0.314  Sum_probs=185.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|++++++             .+.++.+|++|+++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876432             2678899999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||.++..            
T Consensus        85 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------  151 (253)
T 2nm0_A           85 HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLL------------  151 (253)
T ss_dssp             TCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCCCC------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCC------------
Confidence            999999999999876543  35788999999999999999999999999877 579999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+....     .+.+++.+|+|+|+.++||+
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~  231 (253)
T 2nm0_A          152 GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLA  231 (253)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            3567889999999999999999999999999999999999999986542221111     13456789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|||.
T Consensus       232 s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          232 SDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CccccCCcCcEEEECCcc
Confidence            865554455556679985

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-42  Score=305.58  Aligned_cols=232  Identities=22%  Similarity=0.269  Sum_probs=196.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            377999999999999999999999999999999999988877776665     346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ + ++||++||..++.            
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~------------  143 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWL------------  143 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcC------------
Confidence            999999999999875433  36789999999999999999999999999876 4 9999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCC--CeEEEEeeCCcccCCCccCcc-hhH-H--------HHHhccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEK--GIGFYSMHPGWAETPGVAKSM-PSF-N--------ERFAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~--gI~v~~v~PG~v~T~~~~~~~-~~~-~--------~~~~~~~~~~~e~A  283 (339)
                      +.++...|++||+++++|+++++.|++++  ||+||+|+||+++|++..... +.. .        ..+.+++.+|+|+|
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  223 (253)
T 1hxh_A          144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHH
Confidence            45678899999999999999999999988  999999999999999754311 111 1        11335677999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||++++....++..+.+|||.
T Consensus       224 ~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          224 QLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHcCccccCCCCcEEEECCCc
Confidence            9999999865554455555679984

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-42  Score=305.62  Aligned_cols=231  Identities=23%  Similarity=0.292  Sum_probs=195.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++.+|++|.++++++++++.+.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999888776655542     46888999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.| ++  .++||++||..++ +           
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~-----------  142 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-G-----------  142 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-C-----------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-C-----------
Confidence            999999999999876543  36789999999999999999999999999 43  6899999998876 2           


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                       .++...|++||+++++|+++++.|++++||+||+|+||+|+|++.....+...+.     +.+++.+|+|+|+.++||+
T Consensus       143 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          143 -AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             -HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence             4567899999999999999999999999999999999999999876543322221     2467889999999999999


Q ss_pred             ccCCCCCCCcceeeCCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++....++..+.+|||..
T Consensus       222 s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCcCCEEEECCCcc
Confidence            8655444444556799853

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-41  Score=299.44  Aligned_cols=230  Identities=21%  Similarity=0.318  Sum_probs=184.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.     .++.++.+|+++.++++++++++  
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~--   82 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKT--   82 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTC--
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhc--
Confidence            45789999999999999999999999999999999999988887776653     36888999999999998887643  


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                        +++|+||||||+......  .+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..+..           
T Consensus        83 --~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------  148 (249)
T 3f9i_A           83 --SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSIVGIA-----------  148 (249)
T ss_dssp             --SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC-------------
T ss_pred             --CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccHHhcc-----------
Confidence              789999999998775443  5778999999999999999999999999877 679999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+.....     +.+++.+|+|+|+.++||
T Consensus       149 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  227 (249)
T 3f9i_A          149 -GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFL  227 (249)
T ss_dssp             -CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence             46778999999999999999999999999999999999999999877654433222     346788999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++....++..+.+|||.
T Consensus       228 ~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          228 ASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             cCCccCCccCcEEEECCCE
Confidence            9866555555566679885

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-41  Score=304.08  Aligned_cols=227  Identities=21%  Similarity=0.250  Sum_probs=191.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.+           ..++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876422           236889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..+..+          .
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~----------~  162 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQP----------M  162 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTSC----------B
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhccC----------C
Confidence            9999999999998765543  6889999999999999999999999999887 6799999999876532          1


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH--HHhccCCCHHHHHHHHHHHhccC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE--RFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+..........  .+.+++.+|+|+|++++||.  .
T Consensus       163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~--~  240 (260)
T 3un1_A          163 VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLE--H  240 (260)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHH--H
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhc--c
Confidence            2345679999999999999999999999999999999999999987643322111  24577889999999999993  2


Q ss_pred             CCCCCCcceeeCCCC
Q 019551          294 KEKLVSGSFYFDRAE  308 (339)
Q Consensus       294 ~~~~~~G~~~~d~~~  308 (339)
                      ....++..+.+|||.
T Consensus       241 ~~~itG~~i~vdGG~  255 (260)
T 3un1_A          241 AGFITGEILHVDGGQ  255 (260)
T ss_dssp             CTTCCSCEEEESTTG
T ss_pred             cCCCCCcEEEECCCe
Confidence            334445556779985

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-41  Score=303.60  Aligned_cols=232  Identities=24%  Similarity=0.259  Sum_probs=191.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  137 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|+++++++++++.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999999888888877655  347889999999999999999998876 


Q ss_pred             CCCccEEEEccc--cc-------cCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          138 NKPVHVLVNNAG--VL-------ENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       138 ~~~id~lInnAG--~~-------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++++|+||||||  +.       .+....+.++|++++++|+.+++.++++++|.|.++ +.++||++||.++..+    
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----  155 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY----  155 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTSC----
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcCC----
Confidence            899999999994  43       122236778999999999999999999999999876 5799999999887632    


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-------H---HHHhccCCC
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-------N---ERFAGNLRT  278 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-------~---~~~~~~~~~  278 (339)
                               ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+..       .   ..+.++..+
T Consensus       156 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T 2qq5_A          156 ---------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAET  226 (260)
T ss_dssp             ---------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCC
Confidence                     235789999999999999999999999999999999999999865432110       0   112334568


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      |+|+|+.++||++++...+++|.++.++
T Consensus       227 pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          227 TELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             HHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             HHHHHHHHHHHhcCcccccccceeechh
Confidence            9999999999998765456778777644

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4.6e-41  Score=303.24  Aligned_cols=239  Identities=15%  Similarity=0.161  Sum_probs=198.7

Q ss_pred             CcccccccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH
Q 019551           52 PEDMQARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      ++.| .++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..+  ++.++.+|++|.+++++
T Consensus        18 ~~~M-~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~   92 (280)
T 3nrc_A           18 GSHM-GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKD   92 (280)
T ss_dssp             -----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHH
T ss_pred             CCcc-cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHH
Confidence            3344 35889999999998  8899999999999999999999987  3445566655544  47889999999999999


Q ss_pred             HHHHHhcCCCCccEEEEccccccCC----C--C-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENN----R--L-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~----~--~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      +++++.+.++++|+||||||+....    .  . .+.++|++.+++|+.+++.++++++|+|+++  .++||++||.++.
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~  170 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGT
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccc
Confidence            9999999999999999999987542    1  1 6789999999999999999999999999765  6999999999887


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhcc
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGN  275 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~  275 (339)
                                  .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......  ....     .+.++
T Consensus       171 ------------~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~  238 (280)
T 3nrc_A          171 ------------KAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKK  238 (280)
T ss_dssp             ------------SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCS
T ss_pred             ------------cCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCC
Confidence                        3567889999999999999999999999999999999999999998765432  1111     13467


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +.+|+|+|+.++||+++.....++..+.+|||..
T Consensus       239 ~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          239 NVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             CCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            8899999999999998655555555566799853

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=302.38  Aligned_cols=230  Identities=23%  Similarity=0.217  Sum_probs=192.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|++++ ++..+++.      . .++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999887 55555542      3 67889999999999999999998


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.++||++||.++..            
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------  141 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLF------------  141 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccccccC------------
Confidence            999999999999876443  35788999999999999999999999999876 579999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHH-----HHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~-----~~~~~~~~~~e~A~  284 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++....      .++...     .+.+++.+|+|+|+
T Consensus       142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  221 (256)
T 2d1y_A          142 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAE  221 (256)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            3567889999999999999999999999999999999999999875431      111101     12456789999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++||++++....++..+.+|||.
T Consensus       222 ~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          222 AVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCCCCCEEEECCCc
Confidence            999999865444444456679985

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.9e-41  Score=296.62  Aligned_cols=230  Identities=23%  Similarity=0.254  Sum_probs=193.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|+++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            37899999999999999999999999999999999999999888887544 35799999999999999999999999999


Q ss_pred             CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+......  .+.++|++.+++|+.|++.++++++|+|++.  ++++|+++|..+..            +.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~------------~~  145 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSAR------------LI  145 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSS------------CC
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcc------------cC
Confidence            99999999998765543  6889999999999999999999999999554  57888888877662            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      ++...|++||+|+++|++++  ++..+||+||+|+||+|+|++........   ...++.+|+|+|+.++||++++....
T Consensus       146 ~~~~~Y~~sKaa~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~p~dva~~v~~l~~~~~~~~  220 (235)
T 3l77_A          146 PYGGGYVSTKWAARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKP---KEKGYLKPDEIAEAVRCLLKLPKDVR  220 (235)
T ss_dssp             TTCHHHHHHHHHHHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCC---GGGTCBCHHHHHHHHHHHHTSCTTCC
T ss_pred             CCcchHHHHHHHHHHHHHHH--hhcCCCeEEEEEeCCccccccccccCCcc---cccCCCCHHHHHHHHHHHHcCCCCCc
Confidence            67789999999999999999  44578999999999999999876543211   12367899999999999999766655


Q ss_pred             CCcceeeCCCCC
Q 019551          298 VSGSFYFDRAEA  309 (339)
Q Consensus       298 ~~G~~~~d~~~~  309 (339)
                      ++..++.|++..
T Consensus       221 ~~~~~~~~~~~~  232 (235)
T 3l77_A          221 VEELMLRSVYQR  232 (235)
T ss_dssp             CCEEEECCTTSC
T ss_pred             cceEEEeecccC
Confidence            544445577753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.1e-41  Score=302.70  Aligned_cols=234  Identities=19%  Similarity=0.252  Sum_probs=196.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++.+|++|+++++++++++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999887766655442     15778899999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..            
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------  151 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV------------  151 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc------------
Confidence            999999999999876443  367899999999999999999999999998773369999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHHH-----HhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNER-----FAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~~-----~~~~~~~~  279 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....           +.....     +.+++.+|
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  231 (263)
T 3ak4_A          152 GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEP  231 (263)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCH
Confidence            35677899999999999999999999999999999999999999754321           111111     24568899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+.++||++++....++..+.+|||.
T Consensus       232 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          232 EDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence            99999999999865444455556779884

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3.4e-41  Score=303.32  Aligned_cols=234  Identities=18%  Similarity=0.143  Sum_probs=191.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCH----HHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSI----TEIKSFAN  132 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~----~~v~~~~~  132 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++| +++++++..+++.+..+ .++.++.+|++|.    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHH
Confidence            367999999999999999999999999999999999 88888888888765433 4688999999999    99999999


Q ss_pred             HHhcCCCCccEEEEccccccCCCC--CCh-----------hhhhhhhhhhhhHHHHHHHHHHHHHHhhCCC------CEE
Q 019551          133 RFSLKNKPVHVLVNNAGVLENNRL--ITS-----------EGFELNFAVNVLGTYTITESMVPLLEKAAPD------ARV  193 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~~~--~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~------~~I  193 (339)
                      ++.+.++++|+||||||+......  .+.           ++|++.+++|+.+++.++++++|.|. + +.      ++|
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~-~~~~~~~~g~i  164 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-E-GGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-c-CCCCCCCCcEE
Confidence            999999999999999998764432  455           88999999999999999999999997 4 34      899


Q ss_pred             EEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH--
Q 019551          194 ITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER--  271 (339)
Q Consensus       194 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--  271 (339)
                      |++||..+..            +.++...|++||+|+++|+++++.|++++||+||+|+||+++|+ . ...+.....  
T Consensus       165 v~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~~~  230 (276)
T 1mxh_A          165 VNLCDAMTDL------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQETQEEYR  230 (276)
T ss_dssp             EEECCGGGGS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHHHHHHH
T ss_pred             EEECchhhcC------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHHHHHHH
Confidence            9999998873            45778899999999999999999999999999999999999999 2 222222221  


Q ss_pred             ---Hhcc-CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          272 ---FAGN-LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       272 ---~~~~-~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         +.++ +.+|+|+|+.++||++++....++..+.+|||.
T Consensus       231 ~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          231 RKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             TTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence               2345 789999999999999865444444455679984

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-41  Score=300.31  Aligned_cols=228  Identities=22%  Similarity=0.278  Sum_probs=194.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC--CCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL--SSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~  135 (339)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. ..++.++.+|+  ++.++++++++++.
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999888887654 23566666666  99999999999999


Q ss_pred             cCCCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.++++|+||||||+.....   ..+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..         
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~---------  159 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSSVGRK---------  159 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCGGGTS---------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcchhhcC---------
Confidence            99999999999999864332   36889999999999999999999999999876 679999999988873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                         +.++...|++||+|+++|+++++.|+++ +||+||+|+||+++|++.....+..   ...+..+|+|+|+.++||++
T Consensus       160 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~p~dva~~~~~l~s  233 (247)
T 3i1j_A          160 ---GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE---NPLNNPAPEDIMPVYLYLMG  233 (247)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS---CGGGSCCGGGGTHHHHHHHS
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc---CccCCCCHHHHHHHHHHHhC
Confidence               4677889999999999999999999987 8999999999999998764332211   12356789999999999998


Q ss_pred             cCCCCCCCccee
Q 019551          292 QPKEKLVSGSFY  303 (339)
Q Consensus       292 ~~~~~~~~G~~~  303 (339)
                      +.. .+++|+.+
T Consensus       234 ~~~-~~itG~~i  244 (247)
T 3i1j_A          234 PDS-TGINGQAL  244 (247)
T ss_dssp             GGG-TTCCSCEE
T ss_pred             chh-ccccCeee
Confidence            544 45566544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-41  Score=304.45  Aligned_cols=236  Identities=22%  Similarity=0.248  Sum_probs=191.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh-cCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK-TGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+++++++..+++... ..+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999999998888877777321 12346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CC----ChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc-cccccCccc
Q 019551          138 NKPVHVLVNNAGVLENNR--LI----TSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM-YTAHLTDDL  210 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~----~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~-~~~~~~~~~  210 (339)
                      ++++|+||||||+.....  ..    +.++|++.+++|+.|++.++++++|.|+++ + ++||++||..+ ..       
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~-------  154 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVNISSIASGLH-------  154 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTTSSSS-------
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEeccccccc-------
Confidence            999999999999875433  24    788999999999999999999999999876 3 99999999887 52       


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---hhH------HH-----HHhccC
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---PSF------NE-----RFAGNL  276 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~~~------~~-----~~~~~~  276 (339)
                           +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....   +..      ..     .+.+++
T Consensus       155 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  229 (278)
T 1spx_A          155 -----ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVM  229 (278)
T ss_dssp             -----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSC
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCC
Confidence                 45677899999999999999999999999999999999999999864321   111      11     124678


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcc-eeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~-~~~d~~~  308 (339)
                      .+|+|+|+.++||++++...+.+|. +.+|||.
T Consensus       230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CCHHHHHHHHHHHcCccccCcccCcEEEECCCc
Confidence            8999999999999986554424554 5579885

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2e-41  Score=303.74  Aligned_cols=235  Identities=15%  Similarity=0.188  Sum_probs=192.8

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..+  ++.++.+|++|+++++++++++
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFG--SELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHH
Confidence            45789999999999  999999999999999999999999543 444555555544  4788999999999999999999


Q ss_pred             hcCCCCccEEEEccccccC----C--CC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLEN----N--RL-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~----~--~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      .+.++++|+||||||+...    .  .. .+.++|++.+++|+.+++.++++++|+|++   .++||++||.++..    
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~----  159 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAER----  159 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTS----
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEecccccc----
Confidence            9999999999999998753    2  22 678999999999999999999999999863   58999999988873    


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSE  280 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~  280 (339)
                              +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......  ...+     .+.+++.+|+
T Consensus       160 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  231 (271)
T 3ek2_A          160 --------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE  231 (271)
T ss_dssp             --------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred             --------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHH
Confidence                    467788999999999999999999999999999999999999998765422  1111     2346788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|+.++||+++.....++..+.+|||..
T Consensus       232 dva~~i~~l~s~~~~~~tG~~i~vdgG~~  260 (271)
T 3ek2_A          232 QVGNAGAFLLSDLASGVTAEVMHVDSGFN  260 (271)
T ss_dssp             HHHHHHHHHHSGGGTTCCSEEEEESTTGG
T ss_pred             HHHHHHHHHcCcccCCeeeeEEEECCCee
Confidence            99999999998655555555566799853

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.9e-41  Score=298.10  Aligned_cols=226  Identities=24%  Similarity=0.327  Sum_probs=181.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++.         +..   .+.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~~---~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQY---PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SCC---SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hcC---CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998752         111   2678899999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------  138 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHT------------  138 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCC------------
Confidence            999999999999876443  36889999999999999999999999999877 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------h-hHH--------HHHhccCCCHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------P-SFN--------ERFAGNLRTSE  280 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~-~~~--------~~~~~~~~~~~  280 (339)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....      . ...        ..+.+++.+|+
T Consensus       139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~  218 (250)
T 2fwm_X          139 PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQ  218 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHH
Confidence            45678899999999999999999999999999999999999999864321      1 111        22456788999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+.++||++++....++..+.+|||.
T Consensus       219 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          219 EIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999999865555555556679984

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.4e-40  Score=300.17  Aligned_cols=232  Identities=20%  Similarity=0.247  Sum_probs=197.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++ +
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            3588999999999999999999999999999999999999888877776     347899999999999999999999 7


Q ss_pred             CCCCccEEEEc-cccccCCC-------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcCccccc
Q 019551          137 KNKPVHVLVNN-AGVLENNR-------LITSEGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSSGGMYT  203 (339)
Q Consensus       137 ~~~~id~lInn-AG~~~~~~-------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS~~~~~  203 (339)
                      .++++|++||| ||+.....       ..+.++|++.+++|+.+++.+++.++|.|.+.     ++.++||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            88999999999 55544332       35778899999999999999999999999762     2578999999998873


Q ss_pred             cccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-----h-ccCC
Q 019551          204 AHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----A-GNLR  277 (339)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-----~-~~~~  277 (339)
                                  +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....++.....     . +++.
T Consensus       180 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  247 (281)
T 3ppi_A          180 ------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLG  247 (281)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCB
T ss_pred             ------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCC
Confidence                        467789999999999999999999999999999999999999998766544333322     2 5678


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||+++  ...++..+.+|||.
T Consensus       248 ~pedvA~~v~~l~s~--~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          248 TPDEFADAAAFLLTN--GYINGEVMRLDGAQ  276 (281)
T ss_dssp             CHHHHHHHHHHHHHC--SSCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHHcC--CCcCCcEEEECCCc
Confidence            999999999999974  33344455679985

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=9.4e-41  Score=301.64  Aligned_cols=235  Identities=19%  Similarity=0.215  Sum_probs=194.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++ .++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998764 45555555543  34788999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+......  .+.++|++.+++|+.|++.++++++|+|+   +.++||++||..+..+          
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~----------  170 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAK----------  170 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEECCGGGTCS----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEEechhhccC----------
Confidence            99999999999998765432  57899999999999999999999999992   4689999999887632          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----------chhHHH-------HHhccC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----------MPSFNE-------RFAGNL  276 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----------~~~~~~-------~~~~~~  276 (339)
                       ..++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....           .++...       .+.+++
T Consensus       171 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  249 (283)
T 1g0o_A          171 -AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV  249 (283)
T ss_dssp             -SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSC
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCC
Confidence             1224789999999999999999999999999999999999999975421           111111       134567


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+|+|+|+.++||++++....++..+.+|||.
T Consensus       250 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            89999999999999865554445555679884

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5e-41  Score=299.54  Aligned_cols=233  Identities=19%  Similarity=0.250  Sum_probs=195.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLAS---RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~---~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.+++++..+++.+.+++.++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            36799999999999999999999999   899999999999999888888876654567899999999999999999999


Q ss_pred             hc--CCCCcc--EEEEccccccC--C--CC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-CCCCEEEEEcCcccccc
Q 019551          135 SL--KNKPVH--VLVNNAGVLEN--N--RL-ITSEGFELNFAVNVLGTYTITESMVPLLEKA-APDARVITVSSGGMYTA  204 (339)
Q Consensus       135 ~~--~~~~id--~lInnAG~~~~--~--~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~~~~Iv~vsS~~~~~~  204 (339)
                      .+  .++++|  +||||||+...  .  .. .+.++|++++++|+.|++.++++++|.|+++ ++.|+||++||.++.. 
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence            88  678898  99999998643  1  12 4679999999999999999999999999764 1458999999998873 


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHH-----HHHhc
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFN-----ERFAG  274 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~-----~~~~~  274 (339)
                                 +.++...|++||+|+++|+++++.|+++  |+||+|+||+++|++.....     ++..     ..+.+
T Consensus       162 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~  228 (259)
T 1oaa_A          162 -----------PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG  228 (259)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTT
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcC
Confidence                       4677889999999999999999999963  99999999999999864321     1111     12356


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCccee-eCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFY-FDR  306 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~-~d~  306 (339)
                      ++.+|+|+|+.++||+++ . .+.+|..+ +|+
T Consensus       229 ~~~~p~dvA~~v~~l~~~-~-~~itG~~i~vdg  259 (259)
T 1oaa_A          229 ALVDCGTSAQKLLGLLQK-D-TFQSGAHVDFYD  259 (259)
T ss_dssp             CSBCHHHHHHHHHHHHHH-C-CSCTTEEEETTC
T ss_pred             CcCCHHHHHHHHHHHHhh-c-cccCCcEEeccC
Confidence            789999999999999984 3 45566554 454

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9e-41  Score=300.03  Aligned_cols=236  Identities=22%  Similarity=0.233  Sum_probs=191.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999877 78888888777777654  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh--CCCCEEEEEcCccccccccCccccc
Q 019551          138 NKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKA--APDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~--~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      ++++|+||||||+... ..  ..+.++|++.+++|+.|++.+++.++|.|.+.  +..++||++||.++..+        
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  173 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG--------  173 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC--------
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC--------
Confidence            9999999999998764 22  36889999999999999999999999999763  24689999999888743        


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHH-----HHhccCCCHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNE-----RFAGNLRTSEEGADTV  286 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~-----~~~~~~~~~~e~A~~v  286 (339)
                         ..++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..... +....     .+.+++.+|+|+|+.+
T Consensus       174 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i  250 (272)
T 4e3z_A          174 ---SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAI  250 (272)
T ss_dssp             ---CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHH
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence               23356789999999999999999999999999999999999999865421 11111     1345678899999999


Q ss_pred             HHHhccCCCCCCCcceeeCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +||+++.....++..+.+|||
T Consensus       251 ~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          251 LYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCCccccccCCEEeecCC
Confidence            999986555444455567887

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.4e-41  Score=301.99  Aligned_cols=234  Identities=17%  Similarity=0.232  Sum_probs=189.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++ |++|||||++|||+++|++|+++|++|++++|+++++++..+++...   .++.++.+|++|.++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4566 99999999999999999999999999999999998888877776542   3688999999999999999999999


Q ss_pred             CCCCccEEEEccccccC-CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCC-EEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGVLEN-NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA-RVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~-~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~-~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .++++|+||||||+... ..  ..+.++|++++++|+.|++.++++++|.|+++ +.+ +||++||..+..         
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~---------  163 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKW---------  163 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTS---------
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhcc---------
Confidence            99999999999998653 32  36789999999999999999999999999887 456 999999998873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH---HHH-H-hccCCCHHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF---NER-F-AGNLRTSEEGADTVL  287 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~---~~~-~-~~~~~~~~e~A~~v~  287 (339)
                         +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++........   ... . .....+|+|+|+.++
T Consensus       164 ---~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~  240 (272)
T 2nwq_A          164 ---PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIF  240 (272)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHH
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHH
Confidence               45677899999999999999999999999999999999999999865321111   111 1 123579999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+++ ....++..+.+|++.
T Consensus       241 ~l~s~-~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          241 WIMNQ-PAHLNINSLEIMPVS  260 (272)
T ss_dssp             HHHTS-CTTEEEEEEEEEETT
T ss_pred             HHhCC-CccCccceEEEeecc
Confidence            99985 344455556677764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3e-41  Score=302.86  Aligned_cols=230  Identities=24%  Similarity=0.326  Sum_probs=193.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.      .+.++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999887776655431      3788999999999999999999999


Q ss_pred             CCCccEEEEccccccCC-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENN-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+.... .  ..+.++|++.+++|+.+++.++++++|+|+++  .++||++||..+..           
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~-----------  146 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI-----------  146 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH-----------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccC-----------
Confidence            99999999999986532 2  36788999999999999999999999999765  58999999987763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---chh----HH----HHHhccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---MPS----FN----ERFAGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---~~~----~~----~~~~~~~~~~~e~A  283 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+++|++....   .+.    ..    ..+.+++.+|+|+|
T Consensus       147 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva  225 (270)
T 1yde_A          147 -GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVG  225 (270)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHH
Confidence             3466789999999999999999999999999999999999999975321   111    11    12346788999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||+++ ....++..+.+|||.
T Consensus       226 ~~v~~L~s~-~~~itG~~i~vdGG~  249 (270)
T 1yde_A          226 AAAVFLASE-ANFCTGIELLVTGGA  249 (270)
T ss_dssp             HHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred             HHHHHHccc-CCCcCCCEEEECCCe
Confidence            999999986 444444566789985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.9e-40  Score=293.99  Aligned_cols=228  Identities=17%  Similarity=0.234  Sum_probs=185.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++.     .++.++.+|++|+++++++++++.+.++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999988777766652     368899999999999999999999999999


Q ss_pred             cEEEEcccccc-CC--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          142 HVLVNNAGVLE-NN--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       142 d~lInnAG~~~-~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      |+||||||+.. ..  ...+.++|++.+++|+.|++.++++++|+|+++ +.++||++||..+..            +.+
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------~~~  142 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSW------------PYA  142 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTS------------CCT
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhcc------------CCC
Confidence            99999999863 22  236889999999999999999999999999877 579999999998763            456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc-CCCccCcch---hHHHH-H-hccCCCHHHHHHHHHHHhcc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE-TPGVAKSMP---SFNER-F-AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~---~~~~~-~-~~~~~~~~e~A~~v~~l~s~  292 (339)
                      +...|++||+++++|+++++.|++++||+||+|+||+|+ |++......   ..... . .....+|+|+|+.++||+++
T Consensus       143 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~  222 (248)
T 3asu_A          143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL  222 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcC
Confidence            788999999999999999999999999999999999999 998643211   11111 1 12346999999999999985


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                       ...+++..+.++++.
T Consensus       223 -~~~~~g~~i~v~~~~  237 (248)
T 3asu_A          223 -PAHVNINTLEMMPVT  237 (248)
T ss_dssp             -CTTCCCCEEEECCTT
T ss_pred             -CccceeeEEEEcccc
Confidence             445555566667653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.1e-41  Score=297.01  Aligned_cols=225  Identities=20%  Similarity=0.250  Sum_probs=185.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++             +..+.+|++|+++++++++++.+.
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998764321             123789999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            
T Consensus        79 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  145 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLW------------  145 (247)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC--------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECCHhhcc------------
Confidence            999999999999876443  36889999999999999999999999999876 579999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+.....     +.+++.+|+|+|+.++||+
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  225 (247)
T 1uzm_A          146 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA  225 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            35677899999999999999999999999999999999999999765332222221     2356789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++....++..+.+|||.
T Consensus       226 s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          226 SEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CccccCCcCCEEEECCCc
Confidence            865444445555679985

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.4e-41  Score=304.91  Aligned_cols=230  Identities=13%  Similarity=0.149  Sum_probs=189.2

Q ss_pred             ccCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKG-ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|+.++. ++..+    ..+ .++.++.+|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD----RLP-AKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT----TSS-SCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH----hcC-CCceEEEccCCCHHHHHHHHHHH
Confidence            478999999999  99999999999999999999999998653 33332    222 35778999999999999999999


Q ss_pred             hcCCC---CccEEEEccccccC-----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccc
Q 019551          135 SLKNK---PVHVLVNNAGVLEN-----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA  204 (339)
Q Consensus       135 ~~~~~---~id~lInnAG~~~~-----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~  204 (339)
                      .+.++   ++|+||||||+...     ..  ..+.++|++.+++|+.+++.++++++|+|++   .++||++||....  
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~~--  153 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSR--  153 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSS--
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCcccc--
Confidence            99888   99999999998752     22  3678999999999999999999999999864   3899999997653  


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----chh-------HHH--
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----MPS-------FNE--  270 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----~~~-------~~~--  270 (339)
                                 +.+++..|++||+|+++|+++++.|++++||+||+|+||+|+|++....     .+.       ..+  
T Consensus       154 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (269)
T 2h7i_A          154 -----------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW  222 (269)
T ss_dssp             -----------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred             -----------ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhh
Confidence                       3567789999999999999999999999999999999999999975421     011       011  


Q ss_pred             ---HHhc-cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          271 ---RFAG-NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       271 ---~~~~-~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         .+.+ ++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       223 ~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          223 DQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             hccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence               1345 5889999999999999865555455556679984

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.9e-41  Score=297.65  Aligned_cols=233  Identities=24%  Similarity=0.301  Sum_probs=196.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++||++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999885 67788888888887665  347889999999999999999988765


Q ss_pred             C------CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          138 N------KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       138 ~------~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +      +++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|+   +.++||++||.++..      
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~isS~~~~~------  153 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRI------  153 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEECCGGGTS------
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC---CCCEEEEeCChhhcc------
Confidence            4      459999999998765443  68899999999999999999999999984   358999999998873      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH--HH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF--NE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~-----~~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++........  ..     .+.+++.+|+|+
T Consensus       154 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  227 (255)
T 3icc_A          154 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDI  227 (255)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHH
T ss_pred             ------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHH
Confidence                  46778999999999999999999999999999999999999999877653321  11     124678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++||+++.....++..+.+|||.
T Consensus       228 a~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          228 ADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHhCcccCCccCCEEEecCCe
Confidence            99999999865554455555679884

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1e-40  Score=306.20  Aligned_cols=256  Identities=20%  Similarity=0.261  Sum_probs=208.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE---------ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMV---------CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      +++||++|||||++|||+++|++|+++|++|+++         +|+.+++++..+++....+  .   ..+|+++.++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~---~~~D~~~~~~~~   80 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--K---AVANYDSVEAGE   80 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--E---EEEECCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--e---EEEeCCCHHHHH
Confidence            4789999999999999999999999999999996         4577788888777765422  2   247999999999


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++++++.+.++++|+||||||+.....  ..+.++|+..+++|+.|++.++++++|+|+++ +.++||++||.++..   
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~~---  156 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIY---  156 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcc---
Confidence            999999999999999999999876543  36889999999999999999999999999887 579999999987763   


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHH
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v  286 (339)
                               +.++...|++||+|+++|+++++.|++++||+||+|+||++ |++.....+...    ....+|+|+|+.+
T Consensus       157 ---------~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~----~~~~~p~dvA~~~  222 (319)
T 1gz6_A          157 ---------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDL----VEALKPEYVAPLV  222 (319)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHH----HHHSCGGGTHHHH
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhh----hccCCHHHHHHHH
Confidence                     34567899999999999999999999999999999999998 877554322211    1246899999999


Q ss_pred             HHHhccCCCCCCCccee-eCCCCCCcc-c--------ccccccCCHHHHHHHHHHHHhhhcC
Q 019551          287 LWLALQPKEKLVSGSFY-FDRAEAPKH-L--------KFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~-~d~~~~~~~-~--------~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      +||++++ . ..+|.++ +|||..... .        .......+++...+||+.++++.+.
T Consensus       223 ~~l~s~~-~-~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  282 (319)
T 1gz6_A          223 LWLCHES-C-EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA  282 (319)
T ss_dssp             HHHTSTT-C-CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred             HHHhCch-h-hcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhccccc
Confidence            9999853 3 3455554 587742211 0        0124467999999999999998764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.5e-40  Score=297.39  Aligned_cols=233  Identities=15%  Similarity=0.180  Sum_probs=193.3

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+  ...++.+|++|+++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHH
Confidence            3789999999999  9999999999999999999999987 45555566655433  23788999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----CC--C-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          136 LKNKPVHVLVNNAGVLEN----NR--L-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~~--~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      +.++++|+||||||+...    ..  . .+.++|++.+++|+.+++.++++++|.|.+   +++||++||.++..     
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----  154 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER-----  154 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS-----
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhcc-----
Confidence            999999999999998653    22  3 678899999999999999999999999863   48999999988763     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEE  281 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e  281 (339)
                             +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  +....     .+.+++.+|+|
T Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  227 (265)
T 1qsg_A          155 -------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIED  227 (265)
T ss_dssp             -------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHH
Confidence                   35667899999999999999999999999999999999999999865421  11111     13466889999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+.++||++++....++..+.+|||.
T Consensus       228 va~~v~~l~s~~~~~~tG~~~~vdgG~  254 (265)
T 1qsg_A          228 VGNSAAFLCSDLSAGISGEVVHVDGGF  254 (265)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCccCCEEEECCCc
Confidence            999999999865544444456679884

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=3.9e-40  Score=293.80  Aligned_cols=238  Identities=21%  Similarity=0.277  Sum_probs=199.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 777777777777544  3478899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..          
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----------  150 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----------  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----------
Confidence            88899999999999876543  357889999999999999999999999998763368999999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                        +.++...|++||+|++.++++++.|++++||+||+|+||+++|++.....  +.....     +.+++.+|+|+|+.+
T Consensus       151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (261)
T 1gee_A          151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              45678899999999999999999999999999999999999999865331  221111     235678999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++|++++.....+..+.+|||.
T Consensus       229 ~~l~~~~~~~~~G~~~~v~gg~  250 (261)
T 1gee_A          229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCccccCCCCcEEEEcCCc
Confidence            9999854444444455679885

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=9.5e-41  Score=298.14  Aligned_cols=233  Identities=16%  Similarity=0.167  Sum_probs=193.8

Q ss_pred             ccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+  .+.++.+|++|+++++++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999975 4445556655433  37889999999999999999999


Q ss_pred             cCCCCccEEEEccccccC----CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          136 LKNKPVHVLVNNAGVLEN----NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~----~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +.++++|+||||||+...    ..  ..+.++|++.+++|+.+++.++++++|.|++   +++||++||.++..      
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~------  152 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEK------  152 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTS------
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccC------
Confidence            999999999999998653    22  3688999999999999999999999999863   48999999988763      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~e~  282 (339)
                            +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....  +....     .+.+++.+|+|+
T Consensus       153 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  226 (261)
T 2wyu_A          153 ------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEV  226 (261)
T ss_dssp             ------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHH
Confidence                  35677899999999999999999999999999999999999999865321  11111     134678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||++++....++..+.+|||.
T Consensus       227 a~~v~~l~s~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          227 GNLGLFLLSPLASGITGEVVYVDAGY  252 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcChhhcCCCCCEEEECCCc
Confidence            99999999865544445556679884

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=4e-40  Score=297.81  Aligned_cols=237  Identities=24%  Similarity=0.280  Sum_probs=198.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+++++++..+++...  +.++.++.+|++|.++++++++++.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887777654  34688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.|++.+++.++|.|.++ +.++||++||..+..           
T Consensus       118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-----------  185 (285)
T 2c07_A          118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLT-----------  185 (285)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH-----------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcc-----------
Confidence            9999999999999876543  35788999999999999999999999999877 568999999998763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                       +.++...|++||++++.|+++++.|+++.||+||+|+||+++|++.....+.....     +.+++.+|+|+|+.+++|
T Consensus       186 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  264 (285)
T 2c07_A          186 -GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFL  264 (285)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHH
Confidence             34667899999999999999999999999999999999999999876543322222     235678999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++....++..+.+|||.
T Consensus       265 ~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          265 SSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCCCcCCCCCCEEEeCCCc
Confidence            9865544445555678874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-40  Score=302.75  Aligned_cols=222  Identities=23%  Similarity=0.288  Sum_probs=192.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999999999988888765  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|.+++.+++||++||.++..            
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------  173 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV------------  173 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS------------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence            999999999999886544  368899999999999999999999999999875579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH------HH---------HHhccCCCHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF------NE---------RFAGNLRTSE  280 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~~---------~~~~~~~~~~  280 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........      ..         .....+.+|+
T Consensus       174 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  253 (301)
T 3tjr_A          174 PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD  253 (301)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHH
Confidence            46788999999999999999999999999999999999999999865321100      00         0112467999


Q ss_pred             HHHHHHHHHhccC
Q 019551          281 EGADTVLWLALQP  293 (339)
Q Consensus       281 e~A~~v~~l~s~~  293 (339)
                      |+|+.++.++..+
T Consensus       254 dvA~~i~~~l~~~  266 (301)
T 3tjr_A          254 DVARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999998754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=8.5e-41  Score=295.51  Aligned_cols=224  Identities=17%  Similarity=0.131  Sum_probs=185.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-e--cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMV-C--RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ||++|||||++|||+++|++|+++|++|+++ +  |+++++++..+++    .+       +|+.|.++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988877766655    11       2333778888899999999


Q ss_pred             CCCccEEEEccccccC---CC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          138 NKPVHVLVNNAGVLEN---NR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       138 ~~~id~lInnAG~~~~---~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      ++++|+||||||+...   ..  ..+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..+..         
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~---------  139 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGKK---------  139 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS---------
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhCC---------
Confidence            9999999999998765   33  36789999999999999999999999999876 579999999998873         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc---cCcc-hh----HH--HHHhccCCCHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV---AKSM-PS----FN--ERFAGNLRTSEEG  282 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~---~~~~-~~----~~--~~~~~~~~~~~e~  282 (339)
                         +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.   .... ++    ..  ..+.+++.+|+|+
T Consensus       140 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~v  216 (244)
T 1zmo_A          140 ---PLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEM  216 (244)
T ss_dssp             ---CCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHH
Confidence               4567789999999999999999999999999999999999999986   3321 11    11  1234678899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||+++.....++..+.+|||.
T Consensus       217 A~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          217 GALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHcCccccCccCCEEEeCCCC
Confidence            99999999865544444445579985

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.4e-40  Score=296.09  Aligned_cols=225  Identities=22%  Similarity=0.310  Sum_probs=190.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|++++             +.++.++.+|++|.++++++++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998764             236788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.++||++||.++..            
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  138 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSVQASI------------  138 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCchhcc------------
Confidence            999999999999876443  36889999999999999999999999999876 579999999998773            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------h----hHHH-----HHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------P----SFNE-----RFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------~----~~~~-----~~~~~~~~~  279 (339)
                      +.++...|++||+++++|+++++.|+++. |+||+|+||+++|++.....       +    +...     .+.+++.+|
T Consensus       139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p  217 (264)
T 2dtx_A          139 ITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKP  217 (264)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCH
Confidence            45678899999999999999999999988 99999999999999754321       1    1111     134578899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +|+|+.++||++++....++..+.+|||..
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          218 QEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            999999999998655444555556799853

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.5e-40  Score=290.64  Aligned_cols=226  Identities=25%  Similarity=0.287  Sum_probs=187.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||+++|++|+++|++|++++|++++   ..+++    +   +.++.+|++| ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~---~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G---AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T---CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C---cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999876   22232    1   6778999999 9999999999888899


Q ss_pred             ccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++.+          ...+
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----------~~~~  139 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTA----------GGPV  139 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC----------CTTS
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhccC----------CCCC
Confidence            999999999876443  36889999999999999999999999999877 5799999999987742          1126


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHHHHhc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      +...|++||+++++|+++++.|++++||+||+|+||+++|++.....  ++..+.     +.+++.+|+|+|+.++||++
T Consensus       140 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s  219 (239)
T 2ekp_A          140 PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCG  219 (239)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            77899999999999999999999999999999999999999864321  221111     24567899999999999998


Q ss_pred             cCCCCCCCcceeeCCCC
Q 019551          292 QPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~  308 (339)
                      ++....++..+.+|||.
T Consensus       220 ~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          220 DEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             GGGTTCCSCEEEESTTT
T ss_pred             chhcCCCCCEEEECCCc
Confidence            65444444455679884

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-40  Score=292.12  Aligned_cols=245  Identities=20%  Similarity=0.302  Sum_probs=202.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+..+ .++.++.+|++|.++++++++++.+.
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC-CeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999987777766666655443 46889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.+++++.+++|+.+++.++++++|.|.+++..++||++||..+..+....     ..
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----~~  164 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-----LN  164 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----TT
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-----cc
Confidence            9999999999998765432  5789999999999999999999999999877446999999998776321000     01


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +..+...|++||++++.++++++.|++++||+|++|+||+++|++.....+.....     +.+++.+|+|+|+.++||+
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL  244 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhc
Confidence            12236789999999999999999999999999999999999999876543332222     2356789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....+..+.+|||.
T Consensus       245 ~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          245 SDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             SGGGTTCCSCEEEECTTG
T ss_pred             cCchhcCcCcEEEecCCE
Confidence            865555556667789884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7.1e-40  Score=290.34  Aligned_cols=236  Identities=22%  Similarity=0.283  Sum_probs=197.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...   .++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            377999999999999999999999999999999999988877776665432   46889999999999999999999998


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.+++.++|.|++++.+++||++||..++.            
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------  147 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------  147 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc------------
Confidence            999999999999876443  367889999999999999999999999998763338999999988773            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHH------HhccCCCHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNER------FAGNLRTSEEGADTVL  287 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~------~~~~~~~~~e~A~~v~  287 (339)
                      +.++...|++||++++.++++++.|++  +.||+|++|+||+++|++...........      +.+++.+|+|+|+.++
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  227 (251)
T 1zk4_A          148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICV  227 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHH
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHH
Confidence            356778999999999999999999998  88999999999999999765432111111      2356779999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|++++....++..+.+|||.
T Consensus       228 ~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          228 YLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHcCcccccccCcEEEECCCc
Confidence            999865444445556679884

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=294.50  Aligned_cols=227  Identities=22%  Similarity=0.313  Sum_probs=185.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++.. ++      .++.++.+|++|+++++++.+    .
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~~~~~~~~~----~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKKKQIDQFAN----E   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCHHHHHHHHH----H
Confidence            367999999999999999999999999999999999987654432 21      268889999999999885444    4


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|+|+++ +.++||++||.++..+           
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-----------  139 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVK-----------  139 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB-----------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechHhCcC-----------
Confidence            579999999999876543  35789999999999999999999999999877 5799999999887632           


Q ss_pred             CCc-chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------hhHHHH-----HhccCCCHHHHH
Q 019551          216 SFD-GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNER-----FAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~-~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~~~~~~-----~~~~~~~~~e~A  283 (339)
                       .+ +...|++||+++++|+++++.|++++||+||+|+||+++|++.....      +.....     +.+++.+|+|+|
T Consensus       140 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  218 (246)
T 2ag5_A          140 -GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIA  218 (246)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHH
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHH
Confidence             34 67899999999999999999999999999999999999999754311      111111     245678999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||++++....++..+.+|||.
T Consensus       219 ~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          219 MLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999865555555555679884

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1e-39  Score=288.70  Aligned_cols=238  Identities=25%  Similarity=0.311  Sum_probs=200.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+..+ .++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888877777755332 4688999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||......  ..+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..+..           
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~-----------  149 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFT-----------  149 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHHHH-----------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhcC-----------
Confidence            9999999999999876543  25788999999999999999999999999877 568999999987663           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWL  289 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l  289 (339)
                       +.++...|++||++++.++++++.|++++||+|++|+||+++|++.....+.....     +.+++.+|+|+|+.++++
T Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          150 -GNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence             34567899999999999999999999999999999999999999865433222221     235678999999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++.....+..|.+|||.
T Consensus       229 ~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          229 CSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCchhhcCCCcEEEeCCCc
Confidence            9865444445556678873

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.2e-40  Score=294.64  Aligned_cols=221  Identities=19%  Similarity=0.197  Sum_probs=185.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++.            ....+.++.+|++|.++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            3578999999999999999999999 78999999998651            12357899999999999999996554  


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.++|++++++|+.|++.++++++|.|+++   ++||++||..+..            
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~~~~~------------  132 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSDQCFI------------  132 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCGGGTC------------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCHHHcc------------
Confidence            679999999999876543  36889999999999999999999999998653   8999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------HHHH-----HhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------FNER-----FAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~~~-----~~~~~~~~  279 (339)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......           ....     +.+++.+|
T Consensus       133 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  212 (244)
T 4e4y_A          133 AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQP  212 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCH
Confidence            4677889999999999999999999999999999999999999986543221           1111     23568899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+.++||++++....++..+.+|||.
T Consensus       213 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          213 QEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            99999999999866555555566679984

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.9e-39  Score=287.47  Aligned_cols=234  Identities=24%  Similarity=0.308  Sum_probs=196.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999988887777662222 246889999999999999999999999999


Q ss_pred             ccEEEEccccccCCC-----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          141 VHVLVNNAGVLENNR-----LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       141 id~lInnAG~~~~~~-----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|+||||||+.....     ..+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||..+..            
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------------  147 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVASLV------------  147 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcc------------
Confidence            999999999876443     25778999999999999999999999999877 568999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                      +.++...|++||++++.|+++++.|++++||+|++|+||+++|++.....  +.....     +.+++.+|+|+|+.+++
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (250)
T 2cfc_A          148 AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMF  227 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            35677899999999999999999999999999999999999999865411  122221     23567799999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++....++..+.+|||.
T Consensus       228 l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          228 LAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHSTTCTTCCSCEEEESTTG
T ss_pred             HcCchhhcccCCEEEECCce
Confidence            99865444444455679884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=8.9e-40  Score=297.67  Aligned_cols=266  Identities=19%  Similarity=0.185  Sum_probs=209.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ .++.++.+|++|.++++++++++.+.
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888888766533 46899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.+++++.+++|+.+++.++++++|.|.++.+.++||++||..+..            
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~------------  169 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET------------  169 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc------------
Confidence            999999999999865443  367889999999999999999999999998554678999999988763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC-CccCcchh-HH-HH-----HhccCCCHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP-GVAKSMPS-FN-ER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~-~~~~~~~~-~~-~~-----~~~~~~~~~e~A~~v~  287 (339)
                      +.++...|++||++++.++++++.|++++||+|++|+||+++|+ +.....+. .. ..     +.+++.+|+|+|+.++
T Consensus       170 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~  249 (302)
T 1w6u_A          170 GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA  249 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            34677899999999999999999999999999999999999998 43322121 11 11     2356789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCCCcccccccccCCHHHHHHHHHHHHhhhcC
Q 019551          288 WLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRSMANL  338 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (339)
                      +|++++.....+..+.+|||........  .....+...++|+..+++++.
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVLISGE--FNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHHHHST--TGGGGGCCHHHHHHHTTC---
T ss_pred             HHcCCcccccCCCEEEECCCeeeccCCc--cccchhhccccccChhhhccC
Confidence            9998544434444566798853221111  111222345689988887764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.8e-40  Score=289.51  Aligned_cols=221  Identities=19%  Similarity=0.153  Sum_probs=180.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|.++++++++++.+.+   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~---   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIP---   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCC---
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcC---
Confidence            68999999999999999999999999999999998887776655     3467889999999999999998776543   


Q ss_pred             cEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||+......  .+.++|++.+++|+.|++.++++++|.|.++  +++||++||..+..            +.++
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~------------~~~~  139 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMSTAAQQ------------PKAQ  139 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--CCEEEEECCGGGTS------------CCTT
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEeecccCC------------CCCC
Confidence            999999998765543  6889999999999999999999999999875  34999999998873            4677


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVS  299 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~  299 (339)
                      ...|++||+|+++|+++++.|++++||+||+|+||+|+|++......   ..+.+++.+|+|+|+.++|+++++...+++
T Consensus       140 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~dvA~~i~~l~~~~~~~~it  216 (230)
T 3guy_A          140 ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---SLDTSSFMSAEDAALMIHGALANIGNGYVS  216 (230)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------CCCHHHHHHHHHHHCCEETTEEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---CCCcccCCCHHHHHHHHHHHHhCcCCCCcc
Confidence            88999999999999999999999999999999999999998765432   223567899999999999999877777888


Q ss_pred             cceeeCCC
Q 019551          300 GSFYFDRA  307 (339)
Q Consensus       300 G~~~~d~~  307 (339)
                      |..+.+..
T Consensus       217 g~~~~~~~  224 (230)
T 3guy_A          217 DITVNREG  224 (230)
T ss_dssp             EEEEEC--
T ss_pred             ceeecCCC
Confidence            88777544

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.6e-40  Score=292.30  Aligned_cols=240  Identities=23%  Similarity=0.258  Sum_probs=194.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-----CCccEEEEeccCCCHHHHHHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-----GNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++....     +..++.++.+|++|.+++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999999988877766654332     1146888999999999999999


Q ss_pred             HHHhcCCCCc-cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          132 NRFSLKNKPV-HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       132 ~~~~~~~~~i-d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      +.+.+.++++ |+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|.+++..++||++||..+..     
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----  157 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-----  157 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-----
Confidence            9999888998 99999999876543  357899999999999999999999999998773368999999987763     


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHhccCCCHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~e~A  283 (339)
                             +.++...|++||++++.|+++++.|++++||+|++|+||++.|++.....+...+     .+.+++.+|+|+|
T Consensus       158 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (264)
T 2pd6_A          158 -------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVA  230 (264)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHH
T ss_pred             -------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHH
Confidence                   3567789999999999999999999999999999999999999986543221111     1235677999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++++++++....++..+.+|||.
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCc
Confidence            9999999865444445555679885

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=286.02  Aligned_cols=229  Identities=22%  Similarity=0.281  Sum_probs=197.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +|++|||||++|||+++|++|+++|+       +|++++|+.+++++..+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999998888877777543  34788999999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.+.++++|+||||||+......  .+.++|++.+++|+.+++.++++++|+|+++ +.++||++||..++.        
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~--------  150 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATK--------  150 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS--------
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEecchhcC--------
Confidence            99999999999999998765433  5789999999999999999999999999877 579999999998873        


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                          +.++...|++||+++++|+++++.|++++||+|++|+||+++|++........    ..++.+|+|+|+.++++++
T Consensus       151 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~dva~~~~~l~~  222 (244)
T 2bd0_A          151 ----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----QALMMMPEDIAAPVVQAYL  222 (244)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT----GGGSBCHHHHHHHHHHHHT
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc----cccCCCHHHHHHHHHHHHh
Confidence                45677899999999999999999999999999999999999999875432211    2367899999999999998


Q ss_pred             cCCCCCCCcceeeCCCC
Q 019551          292 QPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~  308 (339)
                      ++....+++.+..|+++
T Consensus       223 ~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          223 QPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             SCTTEEEEEEEEEETTC
T ss_pred             CCccccchheEEecccc
Confidence            66555555555557753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=5.4e-39  Score=286.11  Aligned_cols=236  Identities=17%  Similarity=0.238  Sum_probs=198.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888777777654  346899999999999999999999988


Q ss_pred             CCCccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+.. ...  ..+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..+..+          
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~----------  156 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIV----------  156 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEecchhccc----------
Confidence            899999999999875 322  35788999999999999999999999999876 5789999999887632          


Q ss_pred             CCCcch--HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc-Cc-chhHHHH-----HhccCCCHHHHHHH
Q 019551          215 GSFDGM--EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA-KS-MPSFNER-----FAGNLRTSEEGADT  285 (339)
Q Consensus       215 ~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~-~~-~~~~~~~-----~~~~~~~~~e~A~~  285 (339)
                        .++.  ..|++||++++.|+++++.|++++||+|++|+||+++|++.. .. .+.....     +.+++.+|+|+|+.
T Consensus       157 --~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (260)
T 3awd_A          157 --NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASV  234 (260)
T ss_dssp             --CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHH
T ss_pred             --CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHH
Confidence              2333  789999999999999999999999999999999999999865 21 1122111     23567899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++|++++.....+..+.+|||.
T Consensus       235 ~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          235 VQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhccCCCcEEEECCce
Confidence            99999865444444456679874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=290.18  Aligned_cols=230  Identities=20%  Similarity=0.261  Sum_probs=191.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999998888777777654434578899999999999999999999999


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+..      .++|++.+++|+.+++.+++.++|.|++++  +.++||++||..+..            +
T Consensus        85 g~id~lv~~Ag~~~------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~  146 (267)
T 2gdz_A           85 GRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM------------P  146 (267)
T ss_dssp             SCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCCCC------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC------------C
Confidence            99999999999753      467899999999999999999999997652  268999999998873            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHH--HHHHcCCCeEEEEeeCCcccCCCccCcchh--------HHH---HH--hccCCCHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKW--SEMYKEKGIGFYSMHPGWAETPGVAKSMPS--------FNE---RF--AGNLRTSEE  281 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~l--a~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--------~~~---~~--~~~~~~~~e  281 (339)
                      .++...|++||+++++|++++  +.|+++.||+||+|+||+++|++.....+.        ...   .+  ..++.+|+|
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  226 (267)
T 2gdz_A          147 VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPL  226 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHH
Confidence            567789999999999999995  689999999999999999999975432110        001   11  234679999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+.+++|++++  ..++..+.+|+++
T Consensus       227 vA~~v~~l~s~~--~~~G~~~~v~gg~  251 (267)
T 2gdz_A          227 IANGLITLIEDD--ALNGAIMKITTSK  251 (267)
T ss_dssp             HHHHHHHHHHCT--TCSSCEEEEETTT
T ss_pred             HHHHHHHHhcCc--CCCCcEEEecCCC
Confidence            999999999864  3445556677765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.2e-39  Score=286.47  Aligned_cols=235  Identities=20%  Similarity=0.271  Sum_probs=183.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|++|||||++|||+++|++|+++|++|+++ .|+++.+++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999 67877777777776554  347889999999999999999999988


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+.....  ..+.+++++.+++|+.+++.++++++|.|+++ +.++||++||..+..            
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------  147 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGII------------  147 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC-----------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhcc------------
Confidence            999999999999876443  25778899999999999999999999999877 578999999987653            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++...|++||++++.++++++.|++++||+||+|+||+++|++.....+.....     +.+++.+|+|+|+.+++++
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (247)
T 2hq1_A          148 GNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLA  227 (247)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHc
Confidence            34667899999999999999999999999999999999999998765432222221     2356789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.....+..|.+|||.
T Consensus       228 ~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          228 SDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CcccccccCcEEEeCCCc
Confidence            865444445566778874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.8e-39  Score=296.75  Aligned_cols=225  Identities=20%  Similarity=0.216  Sum_probs=188.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++.++.++.+|++|.++++++++.+.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999999888877655558999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcCccccccccCccc
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++++|+||||||+......  .+.+++++++++|+.|++.++++++|.|.++     .+.|+||++||.++..       
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~-------  157 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL-------  157 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc-------
Confidence            9999999999998765543  6789999999999999999999999999764     2578999999999873       


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH------------HHHh---
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN------------ERFA---  273 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~------------~~~~---  273 (339)
                           +.++...|++||+|+++|+++++.|++++||+|++|+||+|+|++......  ...            ....   
T Consensus       158 -----~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (319)
T 3ioy_A          158 -----AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVH  232 (319)
T ss_dssp             -----CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGG
T ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhh
Confidence                 467788999999999999999999999999999999999999998754311  100            0000   


Q ss_pred             ccCCCHHHHHHHHHHHhccCC
Q 019551          274 GNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      ....+|+++|+.++.++..+.
T Consensus       233 ~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          233 EFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             GSSBCHHHHHHHHHHHHHTTC
T ss_pred             hcCCCHHHHHHHHHHHHHcCC
Confidence            112689999999999987554

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.7e-39  Score=285.38  Aligned_cols=233  Identities=23%  Similarity=0.288  Sum_probs=196.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ||+++||||++|||+++|++|+++|++|+++ +|++++.++..+++...  +.++.++.+|++|+++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999984 89988888777777654  24788999999999999999999999999


Q ss_pred             CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+......  .+.++|++.+++|+.+++.+++.++|.|.++ +.++||++||..+..            +.
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~~  145 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLI------------GN  145 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------CC
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECChhhcC------------CC
Confidence            99999999998765433  5788999999999999999999999999877 579999999987763            34


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhcc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ++...|++||+++++++++++.|++++||+|++|+||+++|++.....+.....     +.+++.+|+|+|+.+++|+.+
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (244)
T 1edo_A          146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHC
T ss_pred             CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCC
Confidence            667899999999999999999999999999999999999999865543332222     235678999999999999954


Q ss_pred             CCCCCCCcc-eeeCCCC
Q 019551          293 PKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~-~~~d~~~  308 (339)
                      +...+.+|. +.+|||.
T Consensus       226 ~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          226 PAASYITGQAFTIDGGI  242 (244)
T ss_dssp             SGGGGCCSCEEEESTTT
T ss_pred             CccCCcCCCEEEeCCCc
Confidence            544455555 4578874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3e-39  Score=288.63  Aligned_cols=232  Identities=22%  Similarity=0.258  Sum_probs=191.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998887776665     346889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC--------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEEcCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNR--------LITSEGFELNFAVNVLGTYTITESMVPLLEKAA-----PDARVITVSSGGMYTA  204 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----~~~~Iv~vsS~~~~~~  204 (339)
                      ++++|+||||||+.....        ..+.++|++.+++|+.+++.++++++|.|+++.     +.++||++||..+.. 
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-  162 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-  162 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC-
Confidence            999999999999875443        247788999999999999999999999997652     468999999998763 


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-----HHh-ccCCC
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-----RFA-GNLRT  278 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~-~~~~~  278 (339)
                                 +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+....     .+. +++.+
T Consensus       163 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T 2o23_A          163 -----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGD  231 (265)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBC
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCC
Confidence                       3567789999999999999999999999999999999999999986543221111     122 56789


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|+.+++|++.  ...++..+.+|||.
T Consensus       232 ~~dva~~~~~l~~~--~~~~G~~i~vdgG~  259 (265)
T 2o23_A          232 PAEYAHLVQAIIEN--PFLNGEVIRLDGAI  259 (265)
T ss_dssp             HHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhhc--CccCceEEEECCCE
Confidence            99999999999863  33444556679885

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.4e-39  Score=291.03  Aligned_cols=236  Identities=22%  Similarity=0.288  Sum_probs=182.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999998888887777654  346889999999999999999999888


Q ss_pred             C-CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 N-KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~-~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      + +++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..           
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-----------  156 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVV-----------  156 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC-----------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhcc-----------
Confidence            8 89999999999876443  35789999999999999999999999999877 578999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hH-----HHHHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SF-----NERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~-----~~~~~~~~~~~~e~A~~v~~  288 (339)
                       +.++...|++||++++.|+++++.|++++||+||+|+||++.|++...... ..     ...+.+++.+|+|+|+.+++
T Consensus       157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
T 1xq1_A          157 -SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF  235 (266)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             345677999999999999999999999999999999999999998654321 11     11234567899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++....++..+.+|||.
T Consensus       236 l~~~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          236 LCMPAASYITGQTICVDGGL  255 (266)
T ss_dssp             HTSGGGTTCCSCEEECCCCE
T ss_pred             HcCccccCccCcEEEEcCCc
Confidence            99855444445556679885

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4.1e-39  Score=285.94  Aligned_cols=232  Identities=21%  Similarity=0.273  Sum_probs=193.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccE-EEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV-HLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++ .++.+|++|.++++++++++.+
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998877776665     2356 8899999999999999999988


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       ++++|+||||||+.....  ..+.+++++.+++|+.+++.++++++|.|+++ +.++||++||..+..+          
T Consensus        83 -~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~----------  150 (254)
T 2wsb_A           83 -VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIV----------  150 (254)
T ss_dssp             -HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC----------
T ss_pred             -hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecchhccC----------
Confidence             889999999999876543  35778999999999999999999999999887 5799999999887632          


Q ss_pred             CCCcch--HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHH
Q 019551          215 GSFDGM--EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADT  285 (339)
Q Consensus       215 ~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~  285 (339)
                        .++.  ..|++||++++.++++++.|++++||+|++|+||+++|++.....  +.....     +.+++.+|+|+|+.
T Consensus       151 --~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (254)
T 2wsb_A          151 --NRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAA  228 (254)
T ss_dssp             --CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence              2334  899999999999999999999999999999999999999764321  121111     23567899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++|++++....++..+.+|||.
T Consensus       229 ~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          229 ALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCcccccccCCEEEECCCE
Confidence            99999865444444455678874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2e-41  Score=312.49  Aligned_cols=235  Identities=13%  Similarity=0.139  Sum_probs=186.7

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhc-CCccEEEEeccCCCH--H
Q 019551           60 EGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSK---------EKGETALSAIRSKT-GNENVHLELCDLSSI--T  125 (339)
Q Consensus        60 ~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~---------~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~--~  125 (339)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         ++++...+.+.... ....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999985  999999999999999999777664         22222211111111 113478888999988  7


Q ss_pred             ------------------HHHHHHHHHhcCCCCccEEEEcccccc--CC--CCCChhhhhhhhhhhhhHHHHHHHHHHHH
Q 019551          126 ------------------EIKSFANRFSLKNKPVHVLVNNAGVLE--NN--RLITSEGFELNFAVNVLGTYTITESMVPL  183 (339)
Q Consensus       126 ------------------~v~~~~~~~~~~~~~id~lInnAG~~~--~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~  183 (339)
                                        +++++++++.+.++++|+||||||+..  ..  ...+.++|++++++|+.|++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999752  22  23688999999999999999999999999


Q ss_pred             HHhhCCCCEEEEEcCccccccccCccccccCCCCcchH-HHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCc
Q 019551          184 LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME-QYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       184 m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~  261 (339)
                      |+++   |+||++||..+..            +.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|++.
T Consensus       161 m~~~---g~Iv~isS~~~~~------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~  225 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQK------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             EEEE---EEEEEEECGGGTS------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred             HhhC---CeEEEEeCccccC------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence            9764   8999999998873            456664 9999999999999999999998 899999999999999987


Q ss_pred             cCcch------------------------------------------------h--HHHHHhccCCCHHHHHHHHHHHhc
Q 019551          262 AKSMP------------------------------------------------S--FNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       262 ~~~~~------------------------------------------------~--~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .....                                                .  ....+.+++.+|+|+|+.++||++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s  305 (329)
T 3lt0_A          226 TAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLS  305 (329)
T ss_dssp             HTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHS
T ss_pred             hhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhC
Confidence            54311                                                0  011235778999999999999998


Q ss_pred             cCCCCCCCcceeeCCCCC
Q 019551          292 QPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~  309 (339)
                      +.....++..+.+|||..
T Consensus       306 ~~a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          306 RESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhccccCcEEEEcCCee
Confidence            655555555556799853

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.4e-39  Score=285.23  Aligned_cols=237  Identities=22%  Similarity=0.301  Sum_probs=200.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888877777654  246888999999999999999999888


Q ss_pred             CCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          138 NKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      ++++|+||||||...... ..+.+++++.+++|+.+++.++++++|.|+++ +.++||++||..++.            +
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~  152 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAEN------------K  152 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTC------------C
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcC------------C
Confidence            899999999999876433 35788999999999999999999999999877 578999999988763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      .++...|++||++++.++++++.|++++||+||+|+||++.|++..... +.....     +.+++.+|+|+|+.+++++
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHh
Confidence            5667899999999999999999999999999999999999998765432 222222     2356789999999999999


Q ss_pred             ccCCCCCCCcceeeCCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~~  309 (339)
                      +++.....++.|.+|+|..
T Consensus       233 ~~~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CCccccCCCcEEEECCcee
Confidence            7544444455677888753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=9.4e-40  Score=322.80  Aligned_cols=252  Identities=17%  Similarity=0.222  Sum_probs=198.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++.+|..  ++++.+++.+.  +.++..+.+|++  ++.+++++++.+.
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~~  392 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVIDK  392 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHHh
Confidence            58899999999999999999999999999999998743  34555666544  236777788884  5567788888888


Q ss_pred             CCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+.....  ..+.++|++++++|+.|+++++|+++|+|+++ ++|+||++||.++..            
T Consensus       393 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~ag~~------------  459 (604)
T 2et6_A          393 YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITSTSGIY------------  459 (604)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHS------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcc------------
Confidence            999999999999876443  36889999999999999999999999999876 579999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      +.++...|++||+|+.+|+++|+.|++++||+||+|+||. +|+|.....+.    ......+|+|+|+.++||+++...
T Consensus       460 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~----~~~~~~~pe~vA~~v~~L~s~~~~  534 (604)
T 2et6_A          460 GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE----QDKNLYHADQVAPLLVYLGTDDVP  534 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------CCSSCGGGTHHHHHHTTSTTCC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch----hhccCCCHHHHHHHHHHHhCCccC
Confidence            4577889999999999999999999999999999999995 99986543221    113456899999999999987655


Q ss_pred             CCCCcceeeCCCCCCccc-------ccccccCCHHHHHHHHHHHHh
Q 019551          296 KLVSGSFYFDRAEAPKHL-------KFAATAASHARIDPIVDVLRS  334 (339)
Q Consensus       296 ~~~~G~~~~d~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~  334 (339)
                       .+++.+.+|||......       .......+++...+.|+.+.+
T Consensus       535 -itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          535 -VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             -CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             -CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence             55555567988432100       112334678888888887654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.1e-38  Score=286.90  Aligned_cols=235  Identities=22%  Similarity=0.323  Sum_probs=196.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++..   ..++.++.+|++|+++++++++++.+.
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877666665522   236889999999999999999999998


Q ss_pred             CCCccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+....    ...+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..++.+         
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~---------  159 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTA---------  159 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTCC---------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeEEEEeeccccCC---------
Confidence            99999999999986532    235778999999999999999999999999876 5789999999988732         


Q ss_pred             CCCCc-chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHHH-------HhccCCCHHHH
Q 019551          214 SGSFD-GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNER-------FAGNLRTSEEG  282 (339)
Q Consensus       214 ~~~~~-~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~~-------~~~~~~~~~e~  282 (339)
                         .+ +...|++||+++++++++++.|++++||+|++|+||++.|++......   .....       +.+++.+|+|+
T Consensus       160 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (278)
T 2bgk_A          160 ---GEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDV  236 (278)
T ss_dssp             ---CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHH
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHH
Confidence               34 677999999999999999999999999999999999999998764321   11111       12457899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.+++|++++....++..+.+|||.
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~gg~  262 (278)
T 2bgk_A          237 ADAVAYLAGDESKYVSGLNLVIDGGY  262 (278)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcCcccccCCCCEEEECCcc
Confidence            99999999865444445556679885

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.6e-39  Score=289.77  Aligned_cols=237  Identities=19%  Similarity=0.219  Sum_probs=197.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877776666543  346889999999999999999999888


Q ss_pred             CCCccEEEEccccccC-CC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLEN-NR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++++|+||||||+... ..   ..+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..+         
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~---------  178 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIV---------  178 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC---------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccC---------
Confidence            8999999999998754 22   34678899999999999999999999999877 5799999999887632         


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLW  288 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~  288 (339)
                       ...++...|++||++++.++++++.|++++| +||+|+||+++|++.....+.....     +.+++.+|+|+|+.++|
T Consensus       179 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  256 (279)
T 3ctm_A          179 -NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLY  256 (279)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHH
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHH
Confidence             1146788999999999999999999999999 9999999999999875432222221     34568899999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++....++..+.+|||.
T Consensus       257 l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          257 LASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCccccCccCCEEEECCCe
Confidence            99865544455556679884

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-39  Score=287.13  Aligned_cols=227  Identities=22%  Similarity=0.300  Sum_probs=181.7

Q ss_pred             CcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHH
Q 019551           52 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        52 ~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      +.+....++||++|||||++|||+++|++|+++|++|++++|+++.+    +++    +  .+.++ +|+  .+++++++
T Consensus        10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~----~--~~~~~-~D~--~~~~~~~~   76 (249)
T 1o5i_A           10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS----G--HRYVV-CDL--RKDLDLLF   76 (249)
T ss_dssp             ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT----C--SEEEE-CCT--TTCHHHHH
T ss_pred             hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh----C--CeEEE-eeH--HHHHHHHH
Confidence            33444568999999999999999999999999999999999987432    222    2  46667 999  56677777


Q ss_pred             HHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +++.    ++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..++.      
T Consensus        77 ~~~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------  145 (249)
T 1o5i_A           77 EKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVIS------  145 (249)
T ss_dssp             HHSC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------
T ss_pred             HHhc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcC------
Confidence            7653    7999999999865443  36789999999999999999999999999887 569999999998873      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-H-----HhccCCCHHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-R-----FAGNLRTSEEGA  283 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~-----~~~~~~~~~e~A  283 (339)
                            +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....+.... .     +.+++.+|+|+|
T Consensus       146 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  219 (249)
T 1o5i_A          146 ------PIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIA  219 (249)
T ss_dssp             ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHH
Confidence                  4567889999999999999999999999999999999999999986432222211 1     235678999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.++||++++....++..+.+|||.
T Consensus       220 ~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          220 SVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHcCccccCCCCCEEEECCCc
Confidence            9999999865544445556679885

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.2e-39  Score=289.87  Aligned_cols=226  Identities=16%  Similarity=0.182  Sum_probs=185.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+ +....  .++..+     |.++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~--~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY--PQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC--TTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC--CcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988776655 54432  233333     6777888888888888999


Q ss_pred             cEEEEccccc-cCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          142 HVLVNNAGVL-ENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       142 d~lInnAG~~-~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      |+||||||+. ....  ..+.++|++.+++|+.+++.++++++|.|+++ +.++||++||..+..            +.+
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~~  140 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFG------------PWK  140 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTS------------CCT
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCccccc------------CCC
Confidence            9999999987 4333  36889999999999999999999999999877 579999999998873            456


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc---------cCCCccCcchhHHH-----HHhccCCCHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA---------ETPGVAKSMPSFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v---------~T~~~~~~~~~~~~-----~~~~~~~~~~e~A~  284 (339)
                      +...|++||+|+++|+++++.|++++||+||+|+||+|         +|++.... ++...     .+.+++.+|+|+|+
T Consensus       141 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~-~~~~~~~~~~~p~~~~~~p~dvA~  219 (254)
T 1zmt_A          141 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN-PEHVAHVKKVTALQRLGTQKELGE  219 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC-HHHHHHHHHHSSSSSCBCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC-hHHHHHHhccCCCCCCcCHHHHHH
Confidence            78899999999999999999999999999999999999         78765432 21111     13456789999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      .++||++++....++..+.+|||..
T Consensus       220 ~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          220 LVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHhCcccCCccCCEEEECCCch
Confidence            9999998655444444556799854

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.2e-39  Score=288.15  Aligned_cols=239  Identities=23%  Similarity=0.324  Sum_probs=199.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+ ++++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 88888877777654  3478899999999999999999999


Q ss_pred             cCCCCccEEEEcccc-ccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC----CCCEEEEEcCccccccccCc
Q 019551          136 LKNKPVHVLVNNAGV-LENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAA----PDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       136 ~~~~~id~lInnAG~-~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~----~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      +.++++|+||||||+ .....  ..+.+++++.+++|+.+++.++++++|.|.++.    ..++||++||..+...    
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----  156 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----  156 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----
Confidence            999999999999997 43332  257788999999999999999999999997652    2289999999887631    


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGA  283 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A  283 (339)
                             +.++...|++||++++.++++++.|++++||+||+|+||+++|++.....+.....     +.+++.+|+|+|
T Consensus       157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (258)
T 3afn_B          157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMA  229 (258)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHH
Confidence                   34667899999999999999999999999999999999999999876543332222     235678999999


Q ss_pred             HHHHHHhccCCC-CCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKE-KLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~-~~~~G~~~~d~~~  308 (339)
                      +.++++++++.. ...+..|.+|||.
T Consensus       230 ~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          230 PAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHhCcchhccccCCEEeECCCc
Confidence            999999975444 3344456678875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-39  Score=321.48  Aligned_cols=252  Identities=19%  Similarity=0.217  Sum_probs=200.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK---------EKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.         +.++++.+++....  .++   .+|++|.++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g--~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG--GVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT--CEE---EEECCCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC--CeE---EEEcCCHHHHH
Confidence            47899999999999999999999999999999998765         66777777776542  232   25888888889


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++++++.+.+|++|+||||||+.....  ..+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||.++..   
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~IVnisS~ag~~---  155 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLY---  155 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcC---
Confidence            999999999999999999999876443  36889999999999999999999999999887 579999999998873   


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHH
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v  286 (339)
                               +.++...|++||+|+.+|+++|+.|++++||+||+|+|| ++|++.....+..    .....+|+|+|..+
T Consensus       156 ---------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~----~~~~~~pe~vA~~v  221 (604)
T 2et6_A          156 ---------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPP----MLEKLGPEKVAPLV  221 (604)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHH----HHTTCSHHHHHHHH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChh----hhccCCHHHHHHHH
Confidence                     356788999999999999999999999999999999998 6888754332211    11346899999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCCCcccc--------cccccCCHHHHHHHHHHHH
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEAPKHLK--------FAATAASHARIDPIVDVLR  333 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~  333 (339)
                      +||+++. ...+++.+.+|||.......        .......++...+-|+.+.
T Consensus       222 ~~L~s~~-~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  275 (604)
T 2et6_A          222 LYLSSAE-NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL  275 (604)
T ss_dssp             HHHTSSS-CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred             HHHhCCc-ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence            9999865 44444455569884321100        1223456677777887654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-39  Score=291.62  Aligned_cols=239  Identities=19%  Similarity=0.240  Sum_probs=197.1

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc---CCccEEEEeccCCCHHHHHHHHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT---GNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....   .+.++.++.+|++|.+++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888888876521   235789999999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.+.++++|+||||||+.....  ..+.+++++.+++|+.+++.++++++|.+.++ ..++||++||.. .         
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~-~---------  162 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPT-K---------  162 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCCC-T---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cCCeEEEEEeec-c---------
Confidence            9999999999999999765443  25788999999999999999999999965544 368999999987 4         


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----hhHH-----HHHhccCCCHHHH
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFN-----ERFAGNLRTSEEG  282 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~~~-----~~~~~~~~~~~e~  282 (339)
                         .+.++...|+++|+++.+++++++.|++++||+||+|+||++.|++.....    +...     ..+.+++.+|+|+
T Consensus       163 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  239 (303)
T 1yxm_A          163 ---AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV  239 (303)
T ss_dssp             ---TCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred             ---cCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHH
Confidence               245677899999999999999999999999999999999999999532111    1111     1133567899999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+.++||++++....++..+.+|||..
T Consensus       240 A~~i~~l~~~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          240 SSVVCFLLSPAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCcccccCCCcEEEECCCee
Confidence            999999998654444444556798853

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.8e-40  Score=305.77  Aligned_cols=219  Identities=14%  Similarity=0.002  Sum_probs=180.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHH------------HHHHHHhhcCCccEEEEeccCCCHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGET------------ALSAIRSKTGNENVHLELCDLSSITE  126 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~Dl~~~~~  126 (339)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.+.+++            ..+++.+.  +.++..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            489999999999999999999999 99999999998765332            22344333  3478889999999999


Q ss_pred             HHHHHHHHhcCC-CCccEEEEccccc-------------c--CC---------------------CCCChhhhhhhhhhh
Q 019551          127 IKSFANRFSLKN-KPVHVLVNNAGVL-------------E--NN---------------------RLITSEGFELNFAVN  169 (339)
Q Consensus       127 v~~~~~~~~~~~-~~id~lInnAG~~-------------~--~~---------------------~~~~~~~~~~~~~vN  169 (339)
                      ++++++++.+.+ |++|+||||||+.             .  +.                     ...+.++|++++++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999972             1  11                     125789999999999


Q ss_pred             hhHHH-HHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch--HHHHHhHHHHHHHHHHHHHHHcCCCe
Q 019551          170 VLGTY-TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM--EQYARNKRVQVALTEKWSEMYKEKGI  246 (339)
Q Consensus       170 ~~~~~-~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~~gI  246 (339)
                      ..+++ .+++++++.+... ++|+||++||.++..            +.+.+  .+|++||+|+.+|+|+||.|++++||
T Consensus       218 ~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi~g~~------------~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GI  284 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLA-DGARSVAFSYIGTEI------------TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGG  284 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEE-EEEEEEEEEECCCGG------------GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             chhHHHHHHHHHHHHHHhh-CCCEEEEEeCchhhc------------cCCCccchHHHHHHHHHHHHHHHHHHHhCccCE
Confidence            99997 7888877643333 368999999998763            34556  89999999999999999999999999


Q ss_pred             EEEEeeCCcccCCCccCcc--hh---HHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          247 GFYSMHPGWAETPGVAKSM--PS---FNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       247 ~v~~v~PG~v~T~~~~~~~--~~---~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      |||+|+||+|+|++.....  +.   ....++++.++|||+|+.+.||+++.
T Consensus       285 RVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          285 GANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             EEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             EEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence            9999999999999876542  11   12346789999999999999999864

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.2e-38  Score=281.32  Aligned_cols=230  Identities=20%  Similarity=0.232  Sum_probs=188.5

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +  ...++.+|++|+++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH----
Confidence            3578999999999999999999999999999999999988776655443    1  34567899999999988776    


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..           
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  141 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------  141 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------
Confidence            5678999999999875433  257789999999999999999999999998773369999999988763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHHH-----HhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~-----~~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||++++.++++++.|++++||+|++|+||++.|++.....  +.....     +.+++.+|+|+|+.++
T Consensus       142 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (244)
T 3d3w_A          142 -AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL  220 (244)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHH
Confidence             45677899999999999999999999999999999999999999764221  111111     3456789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++++....++..|.+|+|.
T Consensus       221 ~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          221 FLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHcCccccCCCCCEEEECCCc
Confidence            999854444444456678874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.3e-38  Score=287.10  Aligned_cols=227  Identities=24%  Similarity=0.269  Sum_probs=190.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999998877665543     3478999999999999999999999999


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.++|++.+++|+.|++.++++++|.|+++ +.++||++||..+..            +
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~  144 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQL------------S  144 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTC------------C
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccC------------C
Confidence            99999999999876544  36889999999999999999999999999887 579999999988873            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------chhHHH-----------HHhccCCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------MPSFNE-----------RFAGNLRT  278 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------~~~~~~-----------~~~~~~~~  278 (339)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++....       .+....           .+.+++.+
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (281)
T 3m1a_A          145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGD  224 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCC
Confidence            677889999999999999999999999999999999999999986432       111110           12345789


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      |+|+|+++++++..+.   .++.+++.+
T Consensus       225 ~~dva~a~~~~~~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          225 PAKAAAAIRLALDTEK---TPLRLALGG  249 (281)
T ss_dssp             HHHHHHHHHHHHHSSS---CCSEEEESH
T ss_pred             HHHHHHHHHHHHhCCC---CCeEEecCc
Confidence            9999999999997543   245555543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.2e-38  Score=281.28  Aligned_cols=234  Identities=22%  Similarity=0.292  Sum_probs=195.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCccEEE-EeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTGNENVHL-ELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|+++||||++|||+++|++|+++|++|+++ +|+++++++..+++...  +.++.. +.+|++|.++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999998 89988888777777654  235556 8999999999999999999888


Q ss_pred             CCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+.....  ..+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||..+..            +
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~------------~  145 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGIL------------G  145 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhcc------------C
Confidence            99999999999876443  35788999999999999999999999999877 568999999987763            3


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHhc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .++...|++||++++.++++++.|++++||+|++|+||+++|++.....+.....     +.+++.+|+|+|+.++++++
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  225 (245)
T 2ph3_A          146 NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVS  225 (245)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999999999765433222221     23567799999999999998


Q ss_pred             cCCCCCCCcceeeCCCCC
Q 019551          292 QPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~  309 (339)
                      ++.....+..+.+|||..
T Consensus       226 ~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          226 EKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GGGTTCCSCEEEESTTCS
T ss_pred             cccccccCCEEEECCCCC
Confidence            644434444556788753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.3e-39  Score=299.56  Aligned_cols=254  Identities=13%  Similarity=-0.001  Sum_probs=196.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHH------------HHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGE------------TALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++.+.  +.++..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHH
Confidence            4589999999999999999999999 9999999998765432            122233333  347888999999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEcccccc---------------CC---------------------CCCChhhhhhhhhhh
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLE---------------NN---------------------RLITSEGFELNFAVN  169 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~---------------~~---------------------~~~~~~~~~~~~~vN  169 (339)
                      +++++++++.+.+|++|+||||||+..               +.                     ...+.++|++++++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            999999999999999999999999741               11                     235889999999999


Q ss_pred             hhHHH-HHHHHHHHH-HHhhCCCCEEEEEcCccccccccCccccccCCCCcch--HHHHHhHHHHHHHHHHHHHHHcCC-
Q 019551          170 VLGTY-TITESMVPL-LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM--EQYARNKRVQVALTEKWSEMYKEK-  244 (339)
Q Consensus       170 ~~~~~-~l~~~~l~~-m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~~-  244 (339)
                      ..++| ++++++++. |.+  ++|+||++||.++..            +.+.+  .+|++||+|+++|+|+||.|++++ 
T Consensus       203 ~~~~~~~~~~~~~~~~m~~--~gG~IVniSSi~~~~------------~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~  268 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLA--EGAQTTAFTYLGEKI------------THDIYWNGSIGAAKKDLDQKVLAIRESLAAHG  268 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEE--EEEEEEEEECCCCGG------------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             chhHHHHHHHHHHHHhhhh--CCcEEEEEeCchhhC------------cCCCccchHHHHHHHHHHHHHHHHHHHhCccc
Confidence            99998 788887754 443  369999999998774            34555  899999999999999999999999 


Q ss_pred             CeEEEEeeCCcccCCCccCcc--hh---HHHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC-CCcccccccc
Q 019551          245 GIGFYSMHPGWAETPGVAKSM--PS---FNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE-APKHLKFAAT  318 (339)
Q Consensus       245 gI~v~~v~PG~v~T~~~~~~~--~~---~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~-~~~~~~~~~~  318 (339)
                      |||||+|+||++.|++.....  +.   ....+++++++||++++.+.||+++   ...++..-+|++. ++..- ..+.
T Consensus       269 GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~-~e~~  344 (405)
T 3zu3_A          269 GGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADY-KELD  344 (405)
T ss_dssp             SCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCH-HHHC
T ss_pred             CeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCch-hhcC
Confidence            999999999999999765432  21   2233578899999999999999986   2233444455542 22110 1222


Q ss_pred             cCCHHHHHHHHHHH
Q 019551          319 AASHARIDPIVDVL  332 (339)
Q Consensus       319 ~~~~~~~~~l~~~~  332 (339)
                      ..-+++.++||+.+
T Consensus       345 ~~~q~~~~~~~~~~  358 (405)
T 3zu3_A          345 PEVQNQVQQLWDQV  358 (405)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh
Confidence            34566677788754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-38  Score=283.13  Aligned_cols=239  Identities=23%  Similarity=0.249  Sum_probs=197.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.......++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999988888887776543356888999999999999999999988


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+......  .+.++|++.+++|+.+++.+++.++|.|++++. +++||++||..+...          
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~----------  178 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  178 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc----------
Confidence            8999999999998765433  578899999999999999999999999987632 489999999887621          


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcch---hHH--HHHhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMP---SFN--ERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~---~~~--~~~~~~~~~~~e~A~~v~  287 (339)
                      .+.++...|++||++++.|+++++.|++  +.||+||+|+||+|+|++......   ...  .....++.+|+|+|+.++
T Consensus       179 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~  258 (279)
T 1xg5_A          179 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI  258 (279)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHH
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHH
Confidence            2456778999999999999999999998  889999999999999997432111   111  112345789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ++++++. .+..|.+.++++
T Consensus       259 ~l~~~~~-~~~~g~i~i~~~  277 (279)
T 1xg5_A          259 YVLSTPA-HIQIGDIQMRPT  277 (279)
T ss_dssp             HHHHSCT-TEEEEEEEEEET
T ss_pred             HHhcCCc-ceEeeeEEEccC
Confidence            9998654 456677776544

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=8.4e-39  Score=306.11  Aligned_cols=235  Identities=23%  Similarity=0.276  Sum_probs=189.5

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ...++||++|||||++|||+++|++|+++|++|++++|+... ++..+ +.+..   .+.++.+|++|.++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~-~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKR-VADKV---GGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHH-HHHHH---TCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHH-HHHHc---CCeEEEEecCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999997532 22222 22221   35688999999999999999999


Q ss_pred             cCCCC-ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          136 LKNKP-VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       136 ~~~~~-id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      +.+++ +|+||||||+......  .+.++|++++++|+.|+++++++++|.|.++ +.++||++||.++..         
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iSS~a~~~---------  352 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLSSMAGIA---------  352 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEECCHHHHH---------
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEeChHhCC---------
Confidence            98876 9999999999876543  6889999999999999999999999998766 679999999998874         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh---HHH--HHhccCCCHHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS---FNE--RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~--~~~~~~~~~~e~A~~v~  287 (339)
                         +.+++..|++||+++++|+++++.|++++||+||+|+||+++|++.......   ...  .+.++..+|+|+|+.++
T Consensus       353 ---g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~  429 (454)
T 3u0b_A          353 ---GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIA  429 (454)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHH
Confidence               4578899999999999999999999999999999999999999987643221   111  12456789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+++.....++..+.+|||.
T Consensus       430 fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          430 YFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHCGGGTTCCSCEEEESSSB
T ss_pred             HHhCCccCCCCCcEEEECCcc
Confidence            999865555555555679884

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-38  Score=289.22  Aligned_cols=234  Identities=27%  Similarity=0.331  Sum_probs=190.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~  136 (339)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|. ++++++++.+.+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999999999998887664 35799999999998 999999999999


Q ss_pred             CCCCccEEEEccccccCC--------------------------------CCCChhhhhhhhhhhhhHHHHHHHHHHHHH
Q 019551          137 KNKPVHVLVNNAGVLENN--------------------------------RLITSEGFELNFAVNVLGTYTITESMVPLL  184 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~--------------------------------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m  184 (339)
                      .++++|+||||||+....                                ...+.+++++.+++|+.|++.++++++|+|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            999999999999987421                                124778899999999999999999999999


Q ss_pred             HhhCCCCEEEEEcCccccccccCcc------------------------------ccccCCC-CcchHHHHHhHHHHHHH
Q 019551          185 EKAAPDARVITVSSGGMYTAHLTDD------------------------------LEFNSGS-FDGMEQYARNKRVQVAL  233 (339)
Q Consensus       185 ~~~~~~~~Iv~vsS~~~~~~~~~~~------------------------------~~~~~~~-~~~~~~Y~~sKaa~~~l  233 (339)
                      +++ +.++||++||..+..+.....                              ......+ .++...|++||+|+++|
T Consensus       168 ~~~-~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          168 QLS-DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             TTS-SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             ccC-CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            876 578999999988765421100                              0000011 24567899999999999


Q ss_pred             HHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       234 ~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +++++.|++  +|+||+|+||+|+|++.....          ..+|+++|+.+++++..+. ...+|.|+..+
T Consensus       247 ~~~la~e~~--~i~v~~v~PG~v~T~~~~~~~----------~~~~~~~a~~~~~~~~~~~-~~~~g~~~~~s  306 (311)
T 3o26_A          247 TRVLANKIP--KFQVNCVCPGLVKTEMNYGIG----------NYTAEEGAEHVVRIALFPD-DGPSGFFYDCS  306 (311)
T ss_dssp             HHHHHHHCT--TSEEEEECCCSBCSGGGTTCC----------SBCHHHHHHHHHHHHTCCS-SCCCSCEETC-
T ss_pred             HHHHHhhcC--CceEEEecCCceecCCcCCCC----------CCCHHHHHHHHHHHHhCCC-CCCCceEeccc
Confidence            999999986  499999999999999865432          2589999999999987554 45566666543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3.4e-38  Score=276.77  Aligned_cols=222  Identities=21%  Similarity=0.209  Sum_probs=180.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.      ++.++.+|++|.++++++++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE------GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh------hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999887766655431      578889999999999999999998889


Q ss_pred             CccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+.....  ..+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..            +.
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~  144 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSLAGKN------------PF  144 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCTTTTS------------CC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCchhcC------------CC
Confidence            9999999999875443  35789999999999999999999999999876 579999999988763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKL  297 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~  297 (339)
                      ++...|++||+++++++++++.|++++||+|++|+||+++|++.... +..   .  ...+|+|+|+.++++++++. .+
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~---~--~~~~~~dvA~~~~~l~~~~~-~~  217 (234)
T 2ehd_A          145 KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-PGQ---A--WKLKPEDVAQAVLFALEMPG-HA  217 (234)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------CCHHHHHHHHHHHHHSCC-SS
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-ccc---c--CCCCHHHHHHHHHHHhCCCc-cc
Confidence            67789999999999999999999999999999999999999976532 111   1  14799999999999998654 45


Q ss_pred             CCcceeeCCC
Q 019551          298 VSGSFYFDRA  307 (339)
Q Consensus       298 ~~G~~~~d~~  307 (339)
                      .+|.+.+..+
T Consensus       218 ~~g~~~~~~~  227 (234)
T 2ehd_A          218 MVSEIELRPT  227 (234)
T ss_dssp             CCCEEECCC-
T ss_pred             ccceEEEeec
Confidence            5666665433

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.6e-38  Score=282.50  Aligned_cols=226  Identities=23%  Similarity=0.345  Sum_probs=185.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~  136 (339)
                      +++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++.++.+|++|+ ++++++++++.+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            67999999999999999999999999996 9999998743  2334454444445789999999998 999999999999


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.      +.+++++.+++|+.+++.++++++|.|.++.  ..++||++||.+++.           
T Consensus        81 ~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  143 (254)
T 1sby_A           81 QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------  143 (254)
T ss_dssp             HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------
T ss_pred             hcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-----------
Confidence            889999999999974      4578999999999999999999999997652  268999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------hhHHHHH-hccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERF-AGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~~~~~~~-~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.....      +...... ..++.+|+|+|+.++
T Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~  222 (254)
T 1sby_A          144 -AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             -CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHH
Confidence             45678899999999999999999999888999999999999999764321      1111111 124558999999999


Q ss_pred             HHhccCCCCCCCcc-eeeCCCC
Q 019551          288 WLALQPKEKLVSGS-FYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~-~~~d~~~  308 (339)
                      ++++.    ..+|. +.+|||.
T Consensus       223 ~~~~~----~~~G~~~~v~gG~  240 (254)
T 1sby_A          223 KAIEA----NKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHH----CCTTCEEEEETTE
T ss_pred             HHHHc----CCCCCEEEEeCCc
Confidence            99862    33454 5578874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.1e-38  Score=278.18  Aligned_cols=206  Identities=15%  Similarity=0.124  Sum_probs=174.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh---
Confidence            367999999999999999999999999999999999764                      8999999999999876   


Q ss_pred             CCCccEEEEccccccC-C--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLEN-N--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       +++|+||||||+... .  ...+.++|++.+++|+.+++.++++++|+|++   +|+||++||..+..           
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~-----------  122 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRK-----------  122 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTS-----------
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhcc-----------
Confidence             799999999998732 2  23688999999999999999999999999864   48999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH---------HHhccCCCHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE---------RFAGNLRTSEEGADT  285 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~~~~e~A~~  285 (339)
                       +.++...|++||+|+++|+++++.|+++  |+||+|+||+++|++.....+....         .+.+++.+|+|+|++
T Consensus       123 -~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  199 (223)
T 3uce_A          123 -VVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMA  199 (223)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence             4677889999999999999999999987  9999999999999987665432211         134678899999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++|++++  ...++..+.+|||.
T Consensus       200 ~~~l~~~--~~~tG~~i~vdgG~  220 (223)
T 3uce_A          200 YLFAIQN--SYMTGTVIDVDGGA  220 (223)
T ss_dssp             HHHHHHC--TTCCSCEEEESTTG
T ss_pred             HHHHccC--CCCCCcEEEecCCe
Confidence            9999973  33344455679884

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.7e-39  Score=286.66  Aligned_cols=221  Identities=13%  Similarity=0.054  Sum_probs=183.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++|++|||||++|||+++|++|+++|++|++++|++++.+            ....++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999976532            135678899999999999999999888


Q ss_pred             --CCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          139 --KPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       139 --~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                        +++|+||||||+.....   ..+.++|++.+++|+.+++.++++++|.|++   +++||++||.++..          
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------  139 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALD----------  139 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS----------
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHcc----------
Confidence              79999999999875433   3467889999999999999999999999864   48999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                        +.++...|++||+|+++|+++++.|++  ++||+||+|+||+++|++.....+..   ...+..+|+|+|+.++++++
T Consensus       140 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~vA~~v~~l~~  214 (241)
T 1dhr_A          140 --GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA---DFSSWTPLEFLVETFHDWIT  214 (241)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS---CGGGSEEHHHHHHHHHHHHT
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch---hhccCCCHHHHHHHHHHHhc
Confidence              456788999999999999999999999  89999999999999999754321110   11234679999999999998


Q ss_pred             cCCCCCCCcceeeCCCCC
Q 019551          292 QPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~~  309 (339)
                      +.....+++.+.+||+.-
T Consensus       215 ~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          215 GNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTTCCCTTCEEEEEEETT
T ss_pred             CCCcCccceEEEEeCCCC
Confidence            655444444445688754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7e-38  Score=276.35  Aligned_cols=230  Identities=22%  Similarity=0.272  Sum_probs=188.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +  .+.++.+|++|.++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CCCcEEecCCCHHHHHHHHH----
Confidence            3578999999999999999999999999999999999988776555432    1  35567999999999988776    


Q ss_pred             CCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|.+++..++||++||..++.           
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  141 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------  141 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-----------
Confidence            5678999999999876433  357889999999999999999999999998773368999999988773           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHH-----HhccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~-----~~~~~~~~~e~A~~v~  287 (339)
                       +.++...|++||++++.++++++.|++++||+|++|+||++.|++....  .+.....     +.+++.+|+|+|+.++
T Consensus       142 -~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (244)
T 1cyd_A          142 -TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL  220 (244)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHH
Confidence             4567789999999999999999999999999999999999999875421  1111111     2356789999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++++....+++.+.+|||.
T Consensus       221 ~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          221 FLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHSGGGTTCCSSEEEESTTG
T ss_pred             HHhCchhhcccCCEEEECCCc
Confidence            999865544455556679884

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1e-38  Score=283.39  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=183.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +..+|++|||||++|||+++|++|+++|++|++++|+.++.+              ...+.+|++|.++++++++++.+.
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999986422              134678999999999999999999


Q ss_pred             CCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++|+||||||+.....   ..+.+++++.+++|+.|++.++++++|.|++   +|+||++||..+..           
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----------  150 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALN-----------  150 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS-----------
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhcc-----------
Confidence            999999999999876543   3567899999999999999999999999864   48999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                       +.++...|++||+|+++|+++++.|++  ++||+||+|+||+|+|++.....+.   .+.+++.+|+|+|+.+++|+++
T Consensus       151 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          151 -RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD---ANFDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT---SCGGGSBCHHHHHHHHHHHHHC
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc---ccccccCCHHHHHHHHHHHhcC
Confidence             467789999999999999999999987  8999999999999999875433221   1345678999999999999997


Q ss_pred             CCCCCCCcce-eeCCCC
Q 019551          293 PKEKLVSGSF-YFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~-~~d~~~  308 (339)
                      +...+++|.. .+++++
T Consensus       227 ~~~~~~tG~~i~v~~g~  243 (251)
T 3orf_A          227 SDSRPTNGSLVKFETKS  243 (251)
T ss_dssp             GGGCCCTTCEEEEEEET
T ss_pred             ccccCCcceEEEEecCC
Confidence            4555556655 455554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.2e-38  Score=315.95  Aligned_cols=258  Identities=22%  Similarity=0.235  Sum_probs=190.4

Q ss_pred             cccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec---------CchhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           53 EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR---------SKEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        53 ~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      .....+++||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++....+  .+   .+|++|
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~---~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EA---VADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC--CE---EECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eE---EEEeCC
Confidence            33445689999999999999999999999999999999988         77778888888876533  22   379999


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM  201 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~  201 (339)
                      .++++++++++.+.++++|+||||||+.....  ..+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.++
T Consensus        86 ~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS~a~  164 (613)
T 3oml_A           86 VIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSSNSG  164 (613)
T ss_dssp             GGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCHHH
Confidence            99999999999999999999999999987654  36889999999999999999999999999877 6799999999988


Q ss_pred             cccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHH
Q 019551          202 YTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEE  281 (339)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e  281 (339)
                      ..            +.++...|++||+|+++|+++++.|++++||+||+|+||.+ |++.....+..    .....+|+|
T Consensus       165 ~~------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~----~~~~~~ped  227 (613)
T 3oml_A          165 IY------------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI----LFNELKPKL  227 (613)
T ss_dssp             HH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH----HHTTCCGGG
T ss_pred             cC------------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh----hhhcCCHHH
Confidence            74            45678899999999999999999999999999999999975 66655443321    223468999


Q ss_pred             HHHHHHHHhccCCCCCCCcce-eeCCCCCCcccc-------cc---cccCCHHHHHHHHHHHHhh
Q 019551          282 GADTVLWLALQPKEKLVSGSF-YFDRAEAPKHLK-------FA---ATAASHARIDPIVDVLRSM  335 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~-~~d~~~~~~~~~-------~~---~~~~~~~~~~~l~~~~~~~  335 (339)
                      +|+.++||+++. . +.+|.+ .+|||-......       +.   ....+.+...+.|+.+.+.
T Consensus       228 vA~~v~~L~s~~-~-~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~  290 (613)
T 3oml_A          228 IAPVVAYLCHES-C-EDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDM  290 (613)
T ss_dssp             THHHHHHTTSTT-C-CCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCC
T ss_pred             HHHHHHHhcCCC-c-CCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhcc
Confidence            999999999866 4 455555 568884321100       01   1235778888899887654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-37  Score=279.81  Aligned_cols=217  Identities=24%  Similarity=0.288  Sum_probs=190.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++|.++++++++++.+.
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777654  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||..++.            
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------  172 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHV------------  172 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CC------------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcC------------
Confidence            9999999999998765443  4678899999999999999999999999876 579999999998763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc---CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK---EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      +.++...|++||+++++|+++++.|++   +.||+|++|+||+++|++....     ..+.+++.+|+|+|+.+++++.+
T Consensus       173 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~dva~~i~~~~~~  247 (272)
T 1yb1_A          173 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----STSLGPTLEPEEVVNRLMHGILT  247 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----cccccCCCCHHHHHHHHHHHHHc
Confidence            456788999999999999999999997   6799999999999999986431     12346788999999999999975


Q ss_pred             CC
Q 019551          293 PK  294 (339)
Q Consensus       293 ~~  294 (339)
                      +.
T Consensus       248 ~~  249 (272)
T 1yb1_A          248 EQ  249 (272)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-37  Score=286.79  Aligned_cols=189  Identities=22%  Similarity=0.280  Sum_probs=161.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-----chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS-----KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++|++|||||++|||+++|++|+++|++|++++|+     .+++++..+.+...  +.++.++.+|++|.+++++++++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            678999999999999999999999999999988776     44555555554443  35789999999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +.+.+|++|+||||||+.....  ..+.++|++++++|+.|++.++++++|+|+++ +.|+||++||.++...       
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~-------  152 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGG-------  152 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-------
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccC-------
Confidence            9999999999999999876544  36889999999999999999999999999887 6799999999887632       


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                          ..++...|++||+|+++|+++++.|++++||+||+|+||+++|++.
T Consensus       153 ----~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          153 ----TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                3466789999999999999999999999999999999999997653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=279.51  Aligned_cols=236  Identities=18%  Similarity=0.200  Sum_probs=196.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|++|||||++|||++++++|+++|++|++++| +++++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777777777777654  3468899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.++++|+||||||+.....  ..+.++|++.+++|+.+++.++++++|.|+ +  +++||++||..++.          
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~~sS~~~~~----------  161 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIILTSSIAAVM----------  161 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEEECCGGGTC----------
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEEEcChHhcc----------
Confidence            88999999999999876543  367889999999999999999999999987 3  38999999988762          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------------cc-hhHHHH-----Hhcc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------------SM-PSFNER-----FAGN  275 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------------~~-~~~~~~-----~~~~  275 (339)
                       .+.++...|++||++++.++++++.|++++||++++|+||+++|++...            .. ++....     +.++
T Consensus       162 -~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (274)
T 1ja9_A          162 -TGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKR  240 (274)
T ss_dssp             -CSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSS
T ss_pred             -CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCC
Confidence             1245678999999999999999999999999999999999999987551            11 111111     2356


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+|+|+|++++++++++.....+..|.+|||.
T Consensus       241 ~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          241 IGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            789999999999999865444455566778874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-37  Score=276.65  Aligned_cols=241  Identities=21%  Similarity=0.282  Sum_probs=191.3

Q ss_pred             ccCCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           47 SKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRG---ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        47 ~~~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G---~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      +..+.+.....++++|++|||||++|||+++|++|+++|   ++|++++|+.++.+.. +++.+.  +.++.++.+|++|
T Consensus         7 ~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~   83 (267)
T 1sny_A            7 HHHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRN   83 (267)
T ss_dssp             -------------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTC
T ss_pred             chhhcccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCC
Confidence            344444444556889999999999999999999999999   9999999998766543 444443  2478999999999


Q ss_pred             HHHHHHHHHHHhcCCC--CccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh------CC---
Q 019551          124 ITEIKSFANRFSLKNK--PVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKA------AP---  189 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~--~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~---  189 (339)
                      .++++++++++.+.++  ++|+||||||+.. ...  ..+.+++++.+++|+.+++.++++++|.|.++      ..   
T Consensus        84 ~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~  163 (267)
T 1sny_A           84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGV  163 (267)
T ss_dssp             GGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSST
T ss_pred             hHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccC
Confidence            9999999999988887  8999999999876 332  25789999999999999999999999999865      21   


Q ss_pred             -CCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH
Q 019551          190 -DARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF  268 (339)
Q Consensus       190 -~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  268 (339)
                       .++||++||..+..+.         .+.++...|++||+++++|+++++.|++++||+|++|+||+|+|++...     
T Consensus       164 ~~~~iv~isS~~~~~~~---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----  229 (267)
T 1sny_A          164 GRAAIINMSSILGSIQG---------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----  229 (267)
T ss_dssp             TTCEEEEECCGGGCSTT---------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----
T ss_pred             CCceEEEEecccccccC---------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----
Confidence             5899999998876431         1123567899999999999999999999999999999999999998643     


Q ss_pred             HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceee-CCCCCC
Q 019551          269 NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYF-DRAEAP  310 (339)
Q Consensus       269 ~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~-d~~~~~  310 (339)
                           ....+|+++|+.+++++.... ...+|.++. ||+.++
T Consensus       230 -----~~~~~~~~~a~~~~~~~~~~~-~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          230 -----SAPLDVPTSTGQIVQTISKLG-EKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             -----TCSBCHHHHHHHHHHHHHHCC-GGGTTCEECTTSCBCC
T ss_pred             -----CCCCCHHHHHHHHHHHHHhcC-cCCCCcEEccCCcCcC
Confidence                 135789999999999998644 446677765 887654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=6.4e-39  Score=294.51  Aligned_cols=236  Identities=14%  Similarity=0.137  Sum_probs=155.7

Q ss_pred             ccCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCc-----------hhHH-----------HHHHHHHhhcCC-c
Q 019551           58 RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSK-----------EKGE-----------TALSAIRSKTGN-E  112 (339)
Q Consensus        58 ~l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~-----------~~~~-----------~~~~~l~~~~~~-~  112 (339)
                      +++||++|||||  ++|||+++|++|+++|++|++++|++           ++++           ++.+++.+..+. .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            478999999999  89999999999999999999998753           2222           122222221100 0


Q ss_pred             cEEEEecc------------CCC--------HHHHHHHHHHHhcCCCCccEEEEcccccc--CC--CCCChhhhhhhhhh
Q 019551          113 NVHLELCD------------LSS--------ITEIKSFANRFSLKNKPVHVLVNNAGVLE--NN--RLITSEGFELNFAV  168 (339)
Q Consensus       113 ~~~~~~~D------------l~~--------~~~v~~~~~~~~~~~~~id~lInnAG~~~--~~--~~~~~~~~~~~~~v  168 (339)
                      ...++.+|            ++|        .++++++++++.+.++++|+||||||+..  ..  ...+.++|++++++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            02333333            333        45899999999998999999999999763  22  23688999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcC-CCe
Q 019551          169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM-EQYARNKRVQVALTEKWSEMYKE-KGI  246 (339)
Q Consensus       169 N~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~-~gI  246 (339)
                      |+.|++.++++++|+|++   +|+||++||..+..            +.++. ..|++||+|+++|+++|+.|+++ +||
T Consensus       166 N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gI  230 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKE---GGSALALSYIASEK------------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAV  230 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEE---EEEEEEEEECC------------------------------THHHHHHHHHHHHHHHCC
T ss_pred             hhHHHHHHHHHHHHHHhc---CceEEEEecccccc------------ccCccchhhHHHHHHHHHHHHHHHHHhccccCe
Confidence            999999999999999964   38999999988763            34555 68999999999999999999985 899


Q ss_pred             EEEEeeCCcccCCCccCcch--------hH-----HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          247 GFYSMHPGWAETPGVAKSMP--------SF-----NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       247 ~v~~v~PG~v~T~~~~~~~~--------~~-----~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+|+||+|+|++......        ..     ...+.+++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             EEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             eEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            99999999999998653211        00     1124567889999999999999865444444455679985

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=9.4e-39  Score=290.46  Aligned_cols=237  Identities=14%  Similarity=0.151  Sum_probs=178.9

Q ss_pred             cccCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHH-------HHHHHHHhhc-CC--ccEEEEecc----
Q 019551           57 ARIEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGE-------TALSAIRSKT-GN--ENVHLELCD----  120 (339)
Q Consensus        57 ~~l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~-------~~~~~l~~~~-~~--~~~~~~~~D----  120 (339)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|++....       +..+++.+.. +.  .....+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            34789999999999  99999999999999999999997632110       0001111100 00  012333333    


Q ss_pred             ----CC----C--------HHHHHHHHHHHhcCCCCccEEEEcccccc--CC--CCCChhhhhhhhhhhhhHHHHHHHHH
Q 019551          121 ----LS----S--------ITEIKSFANRFSLKNKPVHVLVNNAGVLE--NN--RLITSEGFELNFAVNVLGTYTITESM  180 (339)
Q Consensus       121 ----l~----~--------~~~v~~~~~~~~~~~~~id~lInnAG~~~--~~--~~~~~~~~~~~~~vN~~~~~~l~~~~  180 (339)
                          ++    |        +++++++++++.+.++++|+||||||+..  ..  ...+.++|++.+++|+.|++.+++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                32    2        66899999999988999999999999753  22  23688999999999999999999999


Q ss_pred             HHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccC
Q 019551          181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM-EQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAET  258 (339)
Q Consensus       181 l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T  258 (339)
                      +|+|++   +++||++||.++..            +.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|
T Consensus       164 ~~~m~~---~g~iv~isS~~~~~------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T  228 (297)
T 1d7o_A          164 LPIMNP---GGASISLTYIASER------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             GGGEEE---EEEEEEEECGGGTS------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             HHHhcc---CceEEEEecccccc------------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccccc
Confidence            999964   38999999988763            34555 58999999999999999999985 899999999999999


Q ss_pred             CCccCcc--hhHHH-----HHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          259 PGVAKSM--PSFNE-----RFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       259 ~~~~~~~--~~~~~-----~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++.....  +...+     .+.+++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          229 RAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             chhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9876431  11111     23457889999999999999865444444455679984

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=8.4e-39  Score=293.20  Aligned_cols=236  Identities=15%  Similarity=0.133  Sum_probs=178.5

Q ss_pred             ccCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCch------hHH-HHHHHHHhhcCCc---cEEEEecc-----
Q 019551           58 RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKE------KGE-TALSAIRSKTGNE---NVHLELCD-----  120 (339)
Q Consensus        58 ~l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~------~~~-~~~~~l~~~~~~~---~~~~~~~D-----  120 (339)
                      +++||++|||||  ++|||+++|++|+++|++|++++|++.      ..+ ...+++.+...+.   .+.++.+|     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            478999999999  899999999999999999999998641      000 0111121111111   02333333     


Q ss_pred             -------CC--------CHHHHHHHHHHHhcCCCCccEEEEcccccc--CC--CCCChhhhhhhhhhhhhHHHHHHHHHH
Q 019551          121 -------LS--------SITEIKSFANRFSLKNKPVHVLVNNAGVLE--NN--RLITSEGFELNFAVNVLGTYTITESMV  181 (339)
Q Consensus       121 -------l~--------~~~~v~~~~~~~~~~~~~id~lInnAG~~~--~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l  181 (339)
                             ++        |.++++++++++.+.++++|+||||||+..  ..  ...+.++|++.+++|+.|++.++++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                   33        366899999999999999999999999763  22  236889999999999999999999999


Q ss_pred             HHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch-HHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCC
Q 019551          182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM-EQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETP  259 (339)
Q Consensus       182 ~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~  259 (339)
                      |+|++   +|+||++||.++..            +.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|+
T Consensus       166 ~~m~~---~g~Iv~isS~~~~~------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  230 (315)
T 2o2s_A          166 PIMNE---GGSAVTLSYLAAER------------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR  230 (315)
T ss_dssp             TTEEE---EEEEEEEEEGGGTS------------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred             HHHhc---CCEEEEEecccccc------------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence            99964   38999999988763            34555 58999999999999999999985 8999999999999998


Q ss_pred             CccCcc--------hhH-----HHHHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          260 GVAKSM--------PSF-----NERFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       260 ~~~~~~--------~~~-----~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.....        +..     ...+.+++.+|+|+|+.++||+++.....++..+.+|||.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          231 AASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            754221        111     1124567889999999999999855444444455679985

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-37  Score=274.16  Aligned_cols=230  Identities=22%  Similarity=0.253  Sum_probs=181.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++|+++||||++|||++++++|+++|  ++|++++|+.++++++.+    . .+.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999  999999999887654422    2 2457899999999999999999999888


Q ss_pred             CC--CccEEEEcccccc-CCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh------CC----CCEEEEEcCcccc
Q 019551          138 NK--PVHVLVNNAGVLE-NNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKA------AP----DARVITVSSGGMY  202 (339)
Q Consensus       138 ~~--~id~lInnAG~~~-~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~----~~~Iv~vsS~~~~  202 (339)
                      ++  ++|+||||||+.. ...  ..+.+++++.+++|+.+++.++++++|.|.++      +.    .++||++||..+.
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence            87  8999999999876 333  35788999999999999999999999999765      21    6899999998876


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEG  282 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~  282 (339)
                      .+....     ..+.++...|++||+++++|+++++.|++++||+|++|+||+++|++...          ..+.+|+|+
T Consensus       157 ~~~~~~-----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~  221 (250)
T 1yo6_A          157 ITDNTS-----GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------NAALTVEQS  221 (250)
T ss_dssp             STTCCS-----TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------HHH
T ss_pred             cCCccc-----ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------CCCCCHHHH
Confidence            431100     01114678899999999999999999999999999999999999998643          134789999


Q ss_pred             HHHHHHHhccCCCCCCCcceee-CCCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYF-DRAEAP  310 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~-d~~~~~  310 (339)
                      |+.++++++++. ...+|.++. ||+..+
T Consensus       222 a~~~~~~~~~~~-~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          222 TAELISSFNKLD-NSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             HHHHHHHHTTCC-GGGTTCEEETTEEECC
T ss_pred             HHHHHHHHhccc-ccCCCeEEEECCcCCC
Confidence            999999998654 456777764 877543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.1e-38  Score=280.28  Aligned_cols=214  Identities=21%  Similarity=0.232  Sum_probs=157.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||++|||||++|||+++|++|++ |++|++++|+++++++..+       ..++.++.+|+++.++ .+.+.+..+.+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            6799999999999999999999988 9999999999887665433       1358889999998877 44455556678


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+......  .+.++|++.+++|+.+++.++++++|.|+++  +++||++||..+..            +
T Consensus        74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~------------~  139 (245)
T 3e9n_A           74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNG------------P  139 (245)
T ss_dssp             SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC-------------------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCccccc------------C
Confidence            899999999998765543  5778999999999999999999999999876  38999999998873            4


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-HHhccCCCHHHHHHHHHHHhccCCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-RFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+.... ....++.+|+|+|+.++||++.+..
T Consensus       140 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          140 HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGET  219 (245)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCCc
Confidence            677889999999999999999999999999999999999999987655433222 2345678999999999999986553

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-38  Score=279.35  Aligned_cols=222  Identities=14%  Similarity=0.077  Sum_probs=182.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC-
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN-  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  138 (339)
                      ++|++|||||++|||+++|++|+++|++|++++|++++.+            ....++.+|++|.++++++++++.+.+ 
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999976532            135678899999999999999998887 


Q ss_pred             -CCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          139 -KPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       139 -~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                       +++|+||||||+.....   ..+.++|++.+++|+.+++.++++++|.|++   +++||++||..+..           
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~-----------  135 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMG-----------  135 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS-----------
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhcc-----------
Confidence             79999999999875433   2467889999999999999999999999864   48999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                       +.++...|++||+|+++|+++++.|++  ++||+||+|+||+++|++.....+.   ....+..+|+|+|+.+++++.+
T Consensus       136 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~dvA~~i~~~l~s  211 (236)
T 1ooe_A          136 -PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN---ADHSSWTPLSFISEHLLKWTTE  211 (236)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT---CCGGGCBCHHHHHHHHHHHHHC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC---ccccccCCHHHHHHHHHHHHcC
Confidence             457788999999999999999999998  8999999999999999875432111   0123457899999999955533


Q ss_pred             CCCCCCCcce-eeCCCCCCc
Q 019551          293 PKEKLVSGSF-YFDRAEAPK  311 (339)
Q Consensus       293 ~~~~~~~G~~-~~d~~~~~~  311 (339)
                      +...+.+|.+ .+||+....
T Consensus       212 ~~~~~~~G~~~~v~gg~~~~  231 (236)
T 1ooe_A          212 TSSRPSSGALLKITTENGTS  231 (236)
T ss_dssp             GGGCCCTTCEEEEEEETTEE
T ss_pred             CCcccccccEEEEecCCCcc
Confidence            4444555655 468875433

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.4e-37  Score=286.43  Aligned_cols=219  Identities=20%  Similarity=0.201  Sum_probs=175.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh----cCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK----TGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+.+...    ..+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3789999999999999999999999999999988765544433333321    123478899999999999999999873


Q ss_pred             cCCCCccEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                        ++++|+||||||+.....  ..+.++|++++++|+.|++.++++++|+|+++ +.++||++||.++..          
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~~~~~----------  147 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLM----------  147 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTS----------
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccc----------
Confidence              589999999999875443  35789999999999999999999999999877 579999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------HH----------HHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------FN----------ERF  272 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~----------~~~  272 (339)
                        +.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.......           ..          ..+
T Consensus       148 --~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
T 1jtv_A          148 --GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (327)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHh
Confidence              3567789999999999999999999999999999999999999986542110           00          011


Q ss_pred             hccC-CCHHHHHHHHHHHhccC
Q 019551          273 AGNL-RTSEEGADTVLWLALQP  293 (339)
Q Consensus       273 ~~~~-~~~~e~A~~v~~l~s~~  293 (339)
                      .+++ .+|+|+|+.++++++.+
T Consensus       226 ~~~~~~~pedvA~~i~~l~~~~  247 (327)
T 1jtv_A          226 FREAAQNPEEVAEVFLTALRAP  247 (327)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCS
T ss_pred             hhhcCCCHHHHHHHHHHHHcCC
Confidence            2333 58999999999999754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.3e-37  Score=274.96  Aligned_cols=235  Identities=23%  Similarity=0.334  Sum_probs=193.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            3589999999999999999999999 9999999999998888888887654  346889999999999999999999998


Q ss_pred             CCCccEEEEccccccCCCC-CC-hhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC--------
Q 019551          138 NKPVHVLVNNAGVLENNRL-IT-SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT--------  207 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~-~~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~--------  207 (339)
                      ++++|+||||||+...... .+ .++++..+++|+.|++.++++++|.|++   .++||++||..++.+...        
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHhh
Confidence            9999999999998754332 23 4789999999999999999999998864   479999999877632100        


Q ss_pred             -------ccc---------------cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcC----CCeEEEEeeCCcccCCCc
Q 019551          208 -------DDL---------------EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE----KGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       208 -------~~~---------------~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~----~gI~v~~v~PG~v~T~~~  261 (339)
                             .+.               .....+.+. ..|++||++++.|+++++.|+++    .||+|++|+||+|+|++.
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence                   000               000011222 78999999999999999999987    799999999999999986


Q ss_pred             cCcchhHHHHHhccCCCHHHHHHHHHHHhccCC-CCCCCcceeeCCCCC
Q 019551          262 AKSMPSFNERFAGNLRTSEEGADTVLWLALQPK-EKLVSGSFYFDRAEA  309 (339)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~-~~~~~G~~~~d~~~~  309 (339)
                      ..          .++.+|+|+|+.++||++.+. ....+|.++.++++.
T Consensus       236 ~~----------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~  274 (276)
T 1wma_A          236 GP----------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE  274 (276)
T ss_dssp             CT----------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEE
T ss_pred             Cc----------cccCChhHhhhhHhhhhcCcccccccCceEeccCcee
Confidence            53          246799999999999998654 357889998887754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.1e-36  Score=272.37  Aligned_cols=219  Identities=21%  Similarity=0.204  Sum_probs=185.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+. +..++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888887777654 234788999999999999999999998


Q ss_pred             CCCCccEEEEc-cccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNN-AGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInn-AG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .++++|+|||| ||+..... ..+.+++++.+++|+.|++.++++++|.|++.  .++||++||.++..           
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~-----------  169 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV-----------  169 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS-----------
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCccccc-----------
Confidence            88999999999 57654322 25788999999999999999999999999765  58999999998763           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHH--cCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMY--KEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                       +.++...|++||+++++++++++.|+  ...||+|++|+||+++|++.......   .......+|+++|+.++..+..
T Consensus       170 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          170 -AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG---IVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG---GGGGGCBCHHHHHHHHHHHHHT
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc---cccCCCCCHHHHHHHHHHHHhc
Confidence             45678899999999999999999999  67899999999999999875422111   1123457899999999998864


Q ss_pred             C
Q 019551          293 P  293 (339)
Q Consensus       293 ~  293 (339)
                      +
T Consensus       246 ~  246 (286)
T 1xu9_A          246 R  246 (286)
T ss_dssp             T
T ss_pred             C
Confidence            3

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=5.1e-37  Score=288.57  Aligned_cols=255  Identities=13%  Similarity=-0.002  Sum_probs=196.4

Q ss_pred             cCCCEEEEEcCCCchHHH--HHHHHHHCCCEEEEEecCchh------------HHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           59 IEGKNCVVTGANAGIGYA--TAEGLASRGATVYMVCRSKEK------------GETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a--~a~~l~~~G~~Vvl~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      ..||++|||||++|||++  +|+.|+++|++|++++|+.+.            .+...+.+. .. +.++..+.+|++|.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KK-GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HT-TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-Hc-CCcEEEEEeeCCCH
Confidence            579999999999999999  999999999999999997643            223333333 32 35788999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEcccccc---------------CC---------------------CCCChhhhhhhhhh
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLE---------------NN---------------------RLITSEGFELNFAV  168 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~---------------~~---------------------~~~~~~~~~~~~~v  168 (339)
                      ++++++++++.+.+|++|+||||||...               +.                     ...+.++|+..+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            9999999999999999999999999741               11                     12478899999999


Q ss_pred             hhhHHH-HHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch--HHHHHhHHHHHHHHHHHHHHHcC-C
Q 019551          169 NVLGTY-TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM--EQYARNKRVQVALTEKWSEMYKE-K  244 (339)
Q Consensus       169 N~~~~~-~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~-~  244 (339)
                      |..+.+ .+++++++.+... ++|+||++||.++..            +.+.+  .+|++||+|+++|+++||.|+++ +
T Consensus       216 n~~~~~~~~~~~l~~~~~~~-~gg~IV~iSSi~~~~------------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~  282 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFS-DKATTIAYSYIGSPR------------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVI  282 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-EEEEEEEEECCCCGG------------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhc-CCcEEEEEeCchhcC------------CCCccccHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            999998 7788877654333 468999999988763            34555  89999999999999999999999 9


Q ss_pred             CeEEEEeeCCcccCCCccCcc--hh---HHHHHhccCCCHHHHHHHHHHHhccCCCCCCCcce-eeCCC-CCCccccccc
Q 019551          245 GIGFYSMHPGWAETPGVAKSM--PS---FNERFAGNLRTSEEGADTVLWLALQPKEKLVSGSF-YFDRA-EAPKHLKFAA  317 (339)
Q Consensus       245 gI~v~~v~PG~v~T~~~~~~~--~~---~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~-~~d~~-~~~~~~~~~~  317 (339)
                      |||||+|+||+|+|++.....  +.   ....++++.++||++++.+.||+++   .+.+|.. .+|++ ..+..- ...
T Consensus       283 GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd---~~~~g~~~~~D~~~~~r~d~-~e~  358 (418)
T 4eue_A          283 GGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE---KIYSNEKIQFDDKGRLRMDD-LEL  358 (418)
T ss_dssp             SCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH---TTSSSSCCCCCTTSCEESCT-TTT
T ss_pred             CeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc---cccCCCccccCCCceeeCCh-hhc
Confidence            999999999999999765432  21   1233567889999999999999986   3334555 45654 333211 233


Q ss_pred             ccCCHHHHHHHHHHH
Q 019551          318 TAASHARIDPIVDVL  332 (339)
Q Consensus       318 ~~~~~~~~~~l~~~~  332 (339)
                      ...-+++.++||+.+
T Consensus       359 ~~~~q~~~~~~~~~~  373 (418)
T 4eue_A          359 RKDVQDEVDRIWSNI  373 (418)
T ss_dssp             CHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHh
Confidence            345566667777653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-36  Score=264.80  Aligned_cols=219  Identities=24%  Similarity=0.277  Sum_probs=182.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||++++++|+++|++|++++|+++ .             .++.++.+|++|+++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999875 1             13578899999999999999999 77789


Q ss_pred             ccEEEEccccccCCCC--CC----hhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEEcCccccccccCcc
Q 019551          141 VHVLVNNAGVLENNRL--IT----SEGFELNFAVNVLGTYTITESMVPLLEKAA-----PDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~----~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      +|+||||||.......  .+    .+++++.+++|+.+++.++++++|.|.+++     ..++||++||..+..      
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------  140 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------  140 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc------
Confidence            9999999998765432  22    348999999999999999999999998753     124999999998773      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----Hh-ccCCCHHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FA-GNLRTSEEGA  283 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~-~~~~~~~e~A  283 (339)
                            +.++...|++||++++.++++++.|++++||+|++|+||+++|++.....+...+.     +. +++.+|+|+|
T Consensus       141 ------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  214 (242)
T 1uay_A          141 ------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYA  214 (242)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHH
T ss_pred             ------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHH
Confidence                  34667899999999999999999999999999999999999999865543332222     12 5678999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+++++++  ....+..+.+|||.
T Consensus       215 ~~~~~l~~~--~~~~G~~~~v~gG~  237 (242)
T 1uay_A          215 ALVLHILEN--PMLNGEVVRLDGAL  237 (242)
T ss_dssp             HHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHHHHHhcC--CCCCCcEEEEcCCe
Confidence            999999985  33344456679885

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=4.2e-37  Score=273.50  Aligned_cols=223  Identities=18%  Similarity=0.210  Sum_probs=166.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||++|||+++|++|+++|++|++++|++++++.              . +.+|++|.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998764221              1 568999999998887633   3799


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc---------
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF---------  212 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~---------  212 (339)
                      |+||||||+...     .+.|++.+++|+.+++.++++++|.|+++ +.++||++||.+++......+...         
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999998652     13489999999999999999999999876 569999999998773110000000         


Q ss_pred             -------cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHH-------HHhccCC
Q 019551          213 -------NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNE-------RFAGNLR  277 (339)
Q Consensus       213 -------~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~-------~~~~~~~  277 (339)
                             ...+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.....+ ....       .+.+++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCC
Confidence                   002345788999999999999999999999999999999999999998764311 1111       1235678


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|+.++||++++....++..+.+|||.
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            9999999999999865444444455679884

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.4e-33  Score=299.52  Aligned_cols=235  Identities=19%  Similarity=0.184  Sum_probs=187.4

Q ss_pred             ccCCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAG-IGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||++|||||++| ||+++|+.|+++|++|+++ +|+.+++++..+++.+..+  +.++.++.+|++|.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            478999999999998 9999999999999999998 6888888877777755432  35789999999999999999999


Q ss_pred             HhcC-----CC-CccEEEEccccccCC-CC--CC--hhhhhhhhhhhhhHHHHHHHHH--HHHHHhhCCCCEEEEEcCcc
Q 019551          134 FSLK-----NK-PVHVLVNNAGVLENN-RL--IT--SEGFELNFAVNVLGTYTITESM--VPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       134 ~~~~-----~~-~id~lInnAG~~~~~-~~--~~--~~~~~~~~~vN~~~~~~l~~~~--l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      +.+.     +| ++|+||||||+.... ..  .+  .++|+++|++|+.+++.+++.+  +|.|.++ ++++||++||..
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-~~G~IVnISS~a  830 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSPNH  830 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-CEEEEEEECSCT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-CCCEEEEEcChH
Confidence            9988     66 999999999987655 32  46  7899999999999999999988  6777655 468999999988


Q ss_pred             ccccccCccccccCCCCcchHHHHHhHHHHHHH-HHHHHHHHcCCCeEEEEeeCCccc-CCCccCc--chhHHHHHhccC
Q 019551          201 MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL-TEKWSEMYKEKGIGFYSMHPGWAE-TPGVAKS--MPSFNERFAGNL  276 (339)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~--~~~~~~~~~~~~  276 (339)
                      +..              ++...|++||+|+++| ++.++.|++++ |+||+|+||+|+ |++....  ..........+.
T Consensus       831 g~~--------------gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~  895 (1887)
T 2uv8_A          831 GTF--------------GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT  895 (1887)
T ss_dssp             TCS--------------SCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTHHHHHTTSCCC
T ss_pred             hcc--------------CCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHHHHHHhcCCCC
Confidence            762              2567899999999999 99999999887 999999999999 7876532  111111111245


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcce-ee--CCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSF-YF--DRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~-~~--d~~~  308 (339)
                      .+|+|+|+.++||+++....+++|.. .+  |||.
T Consensus       896 ~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~  930 (1887)
T 2uv8_A          896 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGL  930 (1887)
T ss_dssp             EEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCST
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEEECCCCe
Confidence            68999999999999865234455544 44  5874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.8e-32  Score=235.56  Aligned_cols=199  Identities=19%  Similarity=0.141  Sum_probs=164.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++||||++|||++++++|+++  +|++++|+++++++..+++.    .   .++.+|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~---~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A---RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C---EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C---cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            57999999999999999999999  99999999888776665542    1   7888999999999999887    5799


Q ss_pred             cEEEEccccccCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||......  ..+.+++++.+++|+.+++.+++++    .++ +.++||++||..++.            +.++
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~sS~~~~~------------~~~~  130 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-KGARAVFFGAYPRYV------------QVPG  130 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-EEEEEEEECCCHHHH------------SSTT
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-CCcEEEEEcChhhcc------------CCCC
Confidence            99999999875443  3577899999999999999999988    222 468999999998773            3567


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      ...|++||++++.++++++.|++++||++++|+||++.|++.....     .+.+++.+|+|+|+.+++++..+..
T Consensus       131 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          131 FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLG-----GPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGT-----SCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccC-----CCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999999999999999998743211     1235678999999999999976543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-34  Score=295.07  Aligned_cols=235  Identities=19%  Similarity=0.179  Sum_probs=188.3

Q ss_pred             ccCCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAG-IGYATAEGLASRGATVYMV-CRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+  +.++.++.+|++|.+++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            478999999999998 9999999999999999998 6877777777777754432  35788999999999999999999


Q ss_pred             HhcC-----CC-CccEEEEccccccCC-C--CCC--hhhhhhhhhhhhhHHHHHHHHH--HHHHHhhCCCCEEEEEcCcc
Q 019551          134 FSLK-----NK-PVHVLVNNAGVLENN-R--LIT--SEGFELNFAVNVLGTYTITESM--VPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       134 ~~~~-----~~-~id~lInnAG~~~~~-~--~~~--~~~~~~~~~vN~~~~~~l~~~~--l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      +.+.     +| ++|+||||||+.... .  ..+  .++|++++++|+.+++.+++.+  +|.|.++ ++++||++||.+
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-ggGrIVnISSiA  631 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSPNH  631 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-CEEECCCCCSCT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-CCCEEEEEEChH
Confidence            9988     77 999999999987654 3  245  7899999999999999999998  7888765 468999999988


Q ss_pred             ccccccCccccccCCCCcchHHHHHhHHHHHHH-HHHHHHHHcCCCeEEEEeeCCccc-CCCccCc--chhHHHHHhccC
Q 019551          201 MYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL-TEKWSEMYKEKGIGFYSMHPGWAE-TPGVAKS--MPSFNERFAGNL  276 (339)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~--~~~~~~~~~~~~  276 (339)
                      +..              ++...|++||+|+++| ++.++.|+++. |+||+|+||+|+ |++....  ..........+.
T Consensus       632 G~~--------------Gg~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~  696 (1688)
T 2pff_A          632 GTF--------------GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT  696 (1688)
T ss_dssp             TTS--------------SCBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCC
T ss_pred             hcc--------------CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHHHhCCCCC
Confidence            762              2567899999999999 88888988877 999999999999 7875431  011101111145


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcce-eeC--CCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSF-YFD--RAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~-~~d--~~~  308 (339)
                      .+|+|+|+.++||+++....+++|.. .+|  ||.
T Consensus       697 ~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~  731 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGL  731 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSG
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCe
Confidence            68999999999999865344455554 444  773

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.6e-32  Score=291.00  Aligned_cols=235  Identities=19%  Similarity=0.208  Sum_probs=186.1

Q ss_pred             ccCCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAG-IGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+..+  +.++.++.||++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999995 777777776666644432  35789999999999999999999


Q ss_pred             HhcC---CC-CccEEEEccccccCC-C--CCC--hhhhhhhhhhhhhHHHHHHHH--HHHHHHhhCCCCEEEEEcCcccc
Q 019551          134 FSLK---NK-PVHVLVNNAGVLENN-R--LIT--SEGFELNFAVNVLGTYTITES--MVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       134 ~~~~---~~-~id~lInnAG~~~~~-~--~~~--~~~~~~~~~vN~~~~~~l~~~--~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      +.+.   +| ++|+||||||+.... .  ..+  .++|++++++|+.+++.+++.  ++|.|.++ +.++||++||.++.
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-PAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-CEEECCEECSCSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-CCCEEEEEcchhhc
Confidence            9988   88 999999999987654 3  356  789999999999999999987  67877655 45899999998876


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHH-HHcCCCeEEEEeeCCccc-CCCccCcc--hhHHHHHhccCCC
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE-MYKEKGIGFYSMHPGWAE-TPGVAKSM--PSFNERFAGNLRT  278 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~-e~~~~gI~v~~v~PG~v~-T~~~~~~~--~~~~~~~~~~~~~  278 (339)
                      .              ++...|++||+|+++|++.++. |+++. |+||+|+||+++ |++.....  .........+..+
T Consensus       808 ~--------------gg~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~s  872 (1878)
T 2uv9_A          808 F--------------GNDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFS  872 (1878)
T ss_dssp             S--------------SCCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBC
T ss_pred             c--------------CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchhhHHHHHhcCCCCCC
Confidence            3              2356899999999999987655 57766 999999999999 99865311  0111111114569


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcc-eee--CCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGS-FYF--DRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~-~~~--d~~~  308 (339)
                      |+|+|+.++||+++....+++|. +.+  |||.
T Consensus       873 PeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~  905 (1878)
T 2uv9_A          873 QQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGL  905 (1878)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSG
T ss_pred             HHHHHHHHHHHhCCcccccccCcEEEEEcCCCc
Confidence            99999999999986542344454 444  5774

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.1e-32  Score=244.15  Aligned_cols=223  Identities=21%  Similarity=0.189  Sum_probs=172.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||+||||++++++|+++|++|++++|++++++.               .+.+|++|.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998764210               1568999999999988865   3689


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc----------
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE----------  211 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~----------  211 (339)
                      |+||||||....     .+.++..+++|+.+++.++++++|.|++. +.++||++||..++.........          
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRG-QQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhc-CCceEEEEeccccccccccccchhhhhcccchh
Confidence            999999997652     24588999999999999999999999876 56899999999887432000000          


Q ss_pred             ----ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----hHHHH---HhccCCCH
Q 019551          212 ----FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----SFNER---FAGNLRTS  279 (339)
Q Consensus       212 ----~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~---~~~~~~~~  279 (339)
                          ......++...|++||++++.+++.++.|+++.||++++|+||++.|++.....+     .....   +.+++.++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEP  217 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCH
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCH
Confidence                0000014677999999999999999999999899999999999999987543211     11111   33457899


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|++++++++++.....+..|.+|+|.
T Consensus       218 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          218 REVAEAIAFLLGPQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHHhCCCcccceeeEEEecCCe
Confidence            99999999999865433444556678874

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.98  E-value=3.9e-32  Score=232.76  Aligned_cols=187  Identities=16%  Similarity=0.090  Sum_probs=159.0

Q ss_pred             CC-EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GK-NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k-~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +| +++||||++|||++++++|+ +|++|++++|+++                   .+.+|++|+++++++++++    +
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----G   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----C
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----C
Confidence            44 79999999999999999999 9999999999864                   3679999999999998876    7


Q ss_pred             CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||.......  .+.+++++.+++|+.+++.+++++.|.|++   +++||++||..+..            +.
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~------------~~  122 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMED------------PI  122 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTS------------CC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcC------------CC
Confidence            89999999998754432  578899999999999999999999998853   38999999987763            45


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      ++...|+++|++++.++++++.|+ ++||++++|+||++.|++....    ...+...+.+|+|+|+.+++++.
T Consensus       123 ~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~----~~~~~~~~~~~~dva~~~~~~~~  191 (202)
T 3d7l_A          123 VQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLE----PFFEGFLPVPAAKVARAFEKSVF  191 (202)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHG----GGSTTCCCBCHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhh----hhccccCCCCHHHHHHHHHHhhh
Confidence            677899999999999999999999 7899999999999999864211    00123456899999999998873

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.98  E-value=1.4e-31  Score=260.33  Aligned_cols=216  Identities=13%  Similarity=0.092  Sum_probs=176.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEE-ecCc-------------hhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMV-CRSK-------------EKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      .+|++|||||++|||+++|+.|+++|++ |+++ +|+.             +++++..+++.+.  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            5899999999999999999999999997 7788 8983             4556667777655  45899999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      ++++++++++. .++++|+||||||+......  .+.+++++++++|+.|++++.+.+.+.|++++..++||++||.++.
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            99999999998 78999999999999876543  6889999999999999999999999998766337899999999887


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hHHHHHhccCCCHHH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SFNERFAGNLRTSEE  281 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~e  281 (339)
                      .            +.++...|+++|+++++|    +.+++++||+|++|+||+++|+|...... .......-...+|++
T Consensus       407 ~------------g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee  470 (525)
T 3qp9_A          407 W------------GGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPAT  470 (525)
T ss_dssp             T------------CCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHH
T ss_pred             C------------CCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHH
Confidence            3            467889999999999887    45677889999999999999998743311 111111223578999


Q ss_pred             HHHHHHHHhccCC
Q 019551          282 GADTVLWLALQPK  294 (339)
Q Consensus       282 ~A~~v~~l~s~~~  294 (339)
                      +++.+.+++..+.
T Consensus       471 ~a~~l~~~l~~~~  483 (525)
T 3qp9_A          471 ALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999997654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=2.6e-30  Score=286.56  Aligned_cols=234  Identities=17%  Similarity=0.174  Sum_probs=176.7

Q ss_pred             cCCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEK-----GETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        59 l~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      ++||++|||||++| ||+++|+.|+++|++|++++|+.++     ++++.+++...  +.++..+.+|++|.++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHH
Confidence            78999999999999 9999999999999999999999876     44455554332  3478889999999999999999


Q ss_pred             HHhc----CCCCccEEEEcccc----ccCC---CCCChhhhhhh----hhhhhhHHHHHHHHHHHHHHhhCCCC---EEE
Q 019551          133 RFSL----KNKPVHVLVNNAGV----LENN---RLITSEGFELN----FAVNVLGTYTITESMVPLLEKAAPDA---RVI  194 (339)
Q Consensus       133 ~~~~----~~~~id~lInnAG~----~~~~---~~~~~~~~~~~----~~vN~~~~~~l~~~~l~~m~~~~~~~---~Iv  194 (339)
                      ++.+    .+|++|+||||||+    ....   ...+.++|+..    +++|+.+++.+++.+.|.|.....++   .|+
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence            9988    88999999999998    2211   11244556555    99999999999999999998763222   233


Q ss_pred             EEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHH--HcCCCeEEEEeeCCccc-CCCccCcch--hHH
Q 019551          195 TVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEM--YKEKGIGFYSMHPGWAE-TPGVAKSMP--SFN  269 (339)
Q Consensus       195 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e--~~~~gI~v~~v~PG~v~-T~~~~~~~~--~~~  269 (339)
                      ++|+..+              .+++...|++||+|+++|+|+||.|  ++ .+|+||+|+||+|+ |++......  ...
T Consensus      2292 ~~ss~~g--------------~~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~~~~~~~~~ 2356 (3089)
T 3zen_D         2292 PGSPNRG--------------MFGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQNDAIVSAV 2356 (3089)
T ss_dssp             EECSSTT--------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTTTTTTHHHH
T ss_pred             ECCcccc--------------cCCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccccchhHHHHH
Confidence            3333222              2334568999999999999999999  65 56999999999999 666543211  111


Q ss_pred             HHHhccCCCHHHHHHHHHHHhccCCCCCCCcc-eeeC--CCCC
Q 019551          270 ERFAGNLRTSEEGADTVLWLALQPKEKLVSGS-FYFD--RAEA  309 (339)
Q Consensus       270 ~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~-~~~d--~~~~  309 (339)
                      .....+..+|+|+|+.++||+|+....+++|. +++|  ||-.
T Consensus      2357 ~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2357 EEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             GGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             HhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            11222445899999999999997666666655 4444  7653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.3e-28  Score=236.96  Aligned_cols=210  Identities=18%  Similarity=0.184  Sum_probs=167.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +|++|||||++|||+++|+.|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.++++++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            59999999999999999999999999 899999974   3456666666654  45899999999999999999999877


Q ss_pred             CCCCccEEEEccccc-cCCC--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVL-ENNR--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~-~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      . +++|+||||||+. ....  ..+.+++++++++|+.|++++.+.+.+.     ..++||++||.++..          
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS~a~~~----------  380 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSSGAAVW----------  380 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHT----------
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeChHhcC----------
Confidence            7 7899999999997 4333  3688999999999999999999876543     468999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHHHHhccCCCHHHHHHHHHHHhc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                        +.+++..|+++|+++++|++.    +.+.||++++|+||++.|+.+......  ......-...+|+++++.+.+++.
T Consensus       381 --g~~g~~~YaAaKa~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~  454 (496)
T 3mje_A          381 --GSGGQPGYAAANAYLDALAEH----RRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLE  454 (496)
T ss_dssp             --TCTTCHHHHHHHHHHHHHHHH----HHHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHH
T ss_pred             --CCCCcHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHc
Confidence              467889999999999888775    445799999999999987655432111  111111124689999999999987


Q ss_pred             cCC
Q 019551          292 QPK  294 (339)
Q Consensus       292 ~~~  294 (339)
                      .+.
T Consensus       455 ~~~  457 (496)
T 3mje_A          455 NDD  457 (496)
T ss_dssp             HTC
T ss_pred             CCC
Confidence            544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=2.1e-28  Score=248.62  Aligned_cols=211  Identities=19%  Similarity=0.265  Sum_probs=173.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHH-HCCC-EEEEEecC---chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLA-SRGA-TVYMVCRS---KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~-~~G~-~Vvl~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .+|++|||||++|||+++|+.|+ ++|+ +|++++|+   .+++++..+++...  +.++.++.||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 69999999   45667777777655  458999999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+.+ +||+||||||+......  .+.++|++++++|+.|++++++++.|.|       +||++||.++..         
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~---------  669 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVL---------  669 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHH---------
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcC---------
Confidence            8776 99999999999876554  6899999999999999999999987665       799999999874         


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHHHHh---ccCCCHHHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNERFA---GNLRTSEEGADTVLW  288 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~---~~~~~~~e~A~~v~~  288 (339)
                         +.+++..|+++|+    |+++|+.+++++||++|+|+||++.|+++.....+ ....+.   ....+++|+.+.+..
T Consensus       670 ---g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~  742 (795)
T 3slk_A          670 ---GSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDA  742 (795)
T ss_dssp             ---TCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence               4688999999995    77777888888999999999999999865443222 111111   234678888888888


Q ss_pred             HhccCCCC
Q 019551          289 LALQPKEK  296 (339)
Q Consensus       289 l~s~~~~~  296 (339)
                      ++..+...
T Consensus       743 ~l~~~~~~  750 (795)
T 3slk_A          743 ACGGAHTV  750 (795)
T ss_dssp             HHTSSCSS
T ss_pred             HHhCCCcE
Confidence            77655443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=3e-27  Score=211.24  Aligned_cols=195  Identities=16%  Similarity=0.142  Sum_probs=157.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||+||||++++++|+++|++|++++|++++..           ..++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999999976432           3478999999999999998886       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+||||||+.      +.+.+++.+++|+.|++.+++++.+    . +.++||++||..++..........+..+.++
T Consensus        64 ~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~  132 (267)
T 3rft_A           64 GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARA----H-GQPRIVFASSNHTIGYYPQTERLGPDVPARP  132 (267)
T ss_dssp             TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred             CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence            689999999984      3456889999999999999999833    2 5689999999888743222222222344566


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      ...|+.||++.+.+++.++.++   |++++.|+||.+.++......       ...+..++|+++.+..++..+
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~-------~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM-------LSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH-------HHHBCCHHHHHHHHHHHHHCS
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc-------eeeEEcHHHHHHHHHHHHhCC
Confidence            6789999999999999999886   789999999999987544321       123578999999999998644

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=3.1e-27  Score=207.18  Aligned_cols=206  Identities=17%  Similarity=0.199  Sum_probs=154.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccE-EEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV-HLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+++||+++||||+|+||++++++|+++|++|++++|+++++++..+        ..+ .++.+|++         +.+.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~~~   79 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------EDFS   79 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SCCG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HHHH
Confidence            45889999999999999999999999999999999999987665432        157 88999998         2334


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +.++++|+||||||...      .++++..+++|+.++..+++++..    . +.++||++||.++..+..        .
T Consensus        80 ~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~~~~~~~--------~  140 (236)
T 3e8x_A           80 HAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEK----R-GIKRFIMVSSVGTVDPDQ--------G  140 (236)
T ss_dssp             GGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHH----H-TCCEEEEECCTTCSCGGG--------S
T ss_pred             HHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHH----c-CCCEEEEEecCCCCCCCC--------C
Confidence            44568999999999764      256889999999999999998743    3 468999999966553210        0


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-HhccCCCHHHHHHHHHHHhccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-FAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      + +....|+.+|++++.+.+       ..||+++.++||++.|+............ ....+..++|+|+.+++++..+.
T Consensus       141 ~-~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  212 (236)
T 3e8x_A          141 P-MNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH  212 (236)
T ss_dssp             C-GGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred             h-hhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence            1 467899999999998876       46999999999999998654332110000 02356789999999999997543


Q ss_pred             CCCCCcceeeCCCC
Q 019551          295 EKLVSGSFYFDRAE  308 (339)
Q Consensus       295 ~~~~~G~~~~d~~~  308 (339)
                        ..++.|.+++++
T Consensus       213 --~~g~~~~v~~~~  224 (236)
T 3e8x_A          213 --TIGKTFEVLNGD  224 (236)
T ss_dssp             --GTTEEEEEEECS
T ss_pred             --ccCCeEEEeCCC
Confidence              445667676654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=4.4e-27  Score=226.93  Aligned_cols=209  Identities=19%  Similarity=0.242  Sum_probs=164.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKE---KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++|||||+||||+++|++|+++|+ +|++++|+.+   .+++..+++...  +.++.++.||++|.++++++++.+ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            579999999999999999999999999 5999999875   455666666544  357899999999999999999988 


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ..++++|+||||||+......  .+.+++++++++|+.|++++.+.+.+    . +.++||++||.++..          
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~-~~~~~V~~SS~a~~~----------  366 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----L-DLTAFVLFSSFASAF----------  366 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----S-CCSEEEEEEEHHHHT----------
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----C-CCCEEEEEcChHhcC----------
Confidence            567899999999998875543  68899999999999999999987643    2 568999999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH---hccCCCHHHHHHHHHHHh
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF---AGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~e~A~~v~~l~  290 (339)
                        +.++...|+++|+++++|++.    +...||++++|+||++.++.+....  ....+   .....+++++++.+..++
T Consensus       367 --g~~g~~~Yaaaka~l~~la~~----~~~~gi~v~~i~pG~~~~~gm~~~~--~~~~~~~~g~~~i~~e~~a~~l~~~l  438 (486)
T 2fr1_A          367 --GAPGLGGYAPGNAYLDGLAQQ----RRSDGLPATAVAWGTWAGSGMAEGP--VADRFRRHGVIEMPPETACRALQNAL  438 (486)
T ss_dssp             --CCTTCTTTHHHHHHHHHHHHH----HHHTTCCCEEEEECCBC--------------CTTTTEECBCHHHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCeeCCCcccchh--HHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence              356778999999999888664    4456999999999999987322111  01111   113568999999999998


Q ss_pred             ccCC
Q 019551          291 LQPK  294 (339)
Q Consensus       291 s~~~  294 (339)
                      ..+.
T Consensus       439 ~~~~  442 (486)
T 2fr1_A          439 DRAE  442 (486)
T ss_dssp             HTTC
T ss_pred             hCCC
Confidence            7543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=3.4e-26  Score=221.60  Aligned_cols=208  Identities=18%  Similarity=0.193  Sum_probs=167.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKE---KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+|++|||||++|||+++|++|+++|+ +|++++|+..   .+++..+++...  +.++.++.||++|.++++++++.  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            579999999999999999999999999 6999999874   455666666553  45799999999999999999886  


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                         +++|+||||||+......  .+.++++.++++|+.|++++.+.+.+.    .+.++||++||.++..          
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~SS~a~~~----------  396 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFSSVTGTW----------  396 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEEEGGGTT----------
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeCHHhcC----------
Confidence               689999999998775543  678999999999999999999876432    1457899999988763          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc-cCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                        +.++...|+++|+++++|++.+    ...||++++|+||++ +|+|.................+|+++++.+..++..
T Consensus       397 --g~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          397 --GNAGQGAYAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence              4567889999999999988764    457999999999999 787765432111111222467899999999999875


Q ss_pred             CC
Q 019551          293 PK  294 (339)
Q Consensus       293 ~~  294 (339)
                      +.
T Consensus       471 ~~  472 (511)
T 2z5l_A          471 ND  472 (511)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=6.5e-25  Score=202.21  Aligned_cols=230  Identities=14%  Similarity=0.075  Sum_probs=167.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEE-eccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE-LCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+...+.+....+ .++.++ .+|++|.++++++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-CceEEEEecCCcChHHHHHHHc----
Confidence            46789999999999999999999999999999999998876665555543322 468888 899999987766553    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc-c-ccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD-D-LEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~-~-~~~~~  214 (339)
                         ++|+||||||.....     +++++.+++|+.++..+++++.+.   . +.++||++||.+++...... . .+...
T Consensus        83 ---~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~-~~~~iv~~SS~~~~~~~~~~~~~~~~~E  150 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---P-SVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             ---TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---T-TCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             ---CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---C-CCcEEEEeccHHHhcCCCCCCCCcccCc
Confidence               799999999976532     356788999999999999987541   2 45899999998776321100 0 01110


Q ss_pred             C-----------------CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----chhHHHHH
Q 019551          215 G-----------------SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----MPSFNERF  272 (339)
Q Consensus       215 ~-----------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----~~~~~~~~  272 (339)
                      .                 +..+...|+.||++.+.+++.++.+++. ++++++++||.+.+|.....     .+......
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~  229 (342)
T 1y1p_A          151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL  229 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred             cccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHHH
Confidence            0                 1235678999999999999999999865 89999999999999875432     11111111


Q ss_pred             -------------hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          273 -------------AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       273 -------------~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                                   ...+..++|+|+++++++..+.  ..++.++.+++
T Consensus       230 ~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~~g~  275 (342)
T 1y1p_A          230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAG  275 (342)
T ss_dssp             HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCE
T ss_pred             HcCCCccccccCCcCCEeEHHHHHHHHHHHHcCcc--cCCceEEEeCC
Confidence                         1235679999999999986432  22334555554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=4.2e-25  Score=204.52  Aligned_cols=210  Identities=13%  Similarity=0.147  Sum_probs=162.2

Q ss_pred             CCCcccccccCCCEEEEEcCCCchHHHHHHHHHHC-CC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHH
Q 019551           50 FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASR-GA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEI  127 (339)
Q Consensus        50 ~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~-G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v  127 (339)
                      .++..+...+++|++|||||+|+||++++++|+++ |+ +|++++|++++.+...+++.    ..++.++.+|++|.+++
T Consensus        10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l   85 (344)
T 2gn4_A           10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERL   85 (344)
T ss_dssp             ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHH
T ss_pred             CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHH
Confidence            34444555688999999999999999999999999 98 99999999887766655542    34789999999999998


Q ss_pred             HHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          128 KSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       128 ~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      .++++       ++|+||||||.....  ......++.+++|+.|+..+++++.+.     +.+++|++||..+..    
T Consensus        86 ~~~~~-------~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~----  147 (344)
T 2gn4_A           86 NYALE-------GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAAN----  147 (344)
T ss_dssp             HHHTT-------TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSS----
T ss_pred             HHHHh-------cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCC----
Confidence            87764       689999999976421  122345688999999999999998764     457999999976541    


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH--------------h
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF--------------A  273 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~--------------~  273 (339)
                                 +...|++||++.+.++++++.++++.|+++++++||.|.++... ..+.+....              .
T Consensus       148 -----------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i~~~~~~~~~g~~~~~i~~~~~~  215 (344)
T 2gn4_A          148 -----------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VVPFFKKLVQNKASEIPITDIRMT  215 (344)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HHHHHHHHHHHTCCCEEESCTTCE
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HHHHHHHHHHcCCCceEEeCCCeE
Confidence                       24589999999999999999988888999999999999997521 122221111              1


Q ss_pred             ccCCCHHHHHHHHHHHhccC
Q 019551          274 GNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~  293 (339)
                      ..+..++|+|+.+++++..+
T Consensus       216 r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          216 RFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             EEEECHHHHHHHHHHHHHHC
T ss_pred             EeeEEHHHHHHHHHHHHhhc
Confidence            23568999999999998753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=9.4e-25  Score=201.38  Aligned_cols=233  Identities=13%  Similarity=0.080  Sum_probs=169.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .++++|||||+|+||++++++|+++|++|++++|+.+...+..+++....+ .++.++.+|++|.++++++++.     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG-KTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS-CCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC-CCceEEEeecCCHHHHHHHHhc-----c
Confidence            468999999999999999999999999999999988776666666654433 4688999999999999999886     4


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+||||||......  ..+..++.+++|+.++..+++++    ++. +.++||++||.+.+...... ...+..+..+
T Consensus        78 ~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~~~g~~~~~-~~~e~~~~~~  149 (341)
T 3enk_A           78 PITAAIHFAALKAVGE--SVAKPIEYYRNNLDSLLSLLRVM----RER-AVKRIVFSSSATVYGVPERS-PIDETFPLSA  149 (341)
T ss_dssp             CCCEEEECCCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGGGBCSCSSS-SBCTTSCCBC
T ss_pred             CCcEEEECccccccCc--cccChHHHHHHHHHHHHHHHHHH----HhC-CCCEEEEEecceEecCCCCC-CCCCCCCCCC
Confidence            7999999999764221  23445677899999998887754    343 46799999998877432111 1111234445


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc------------CcchhHHHHHhc-------------
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA------------KSMPSFNERFAG-------------  274 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~------------~~~~~~~~~~~~-------------  274 (339)
                      ...|+.||++.+.+++.++.++.  |++++.++||.+.+|...            ...+.......+             
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP  227 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence            67899999999999999998863  699999999999887431            111111111111             


Q ss_pred             --------cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          275 --------NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       275 --------~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                              .+..++|+|+++++++..+.....++.|.+.+++
T Consensus       228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~  269 (341)
T 3enk_A          228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGR  269 (341)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSC
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCC
Confidence                    1345799999999998643223346677776654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=1.4e-24  Score=200.17  Aligned_cols=229  Identities=19%  Similarity=0.169  Sum_probs=164.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|++|||||+|+||++++++|+++|++|++++|++++.+.  +.+.......++.++.+|++|.+++.++++..     
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            57899999999999999999999999999999998765431  12222222346889999999999999998876     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+||||||....  ..+.++++..+++|+.++..+++++.+.   . ..++||++||.+.+...... ...+..+..+
T Consensus        75 ~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~~~~-~~~e~~~~~~  147 (345)
T 2z1m_A           75 QPDEVYNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV---K-PDTKFYQASTSEMFGKVQEI-PQTEKTPFYP  147 (345)
T ss_dssp             CCSEEEECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTCEEEEEEEGGGGCSCSSS-SBCTTSCCCC
T ss_pred             CCCEEEECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCceEEEEechhhcCCCCCC-CCCccCCCCC
Confidence            68999999997531  1234678889999999999999998742   1 13799999998776432111 1111233455


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHc---CCCeEEEEeeCCcccCCCccCcchhHHHH---------H------hccCCCHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYK---EKGIGFYSMHPGWAETPGVAKSMPSFNER---------F------AGNLRTSEE  281 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---------~------~~~~~~~~e  281 (339)
                      ...|+.||++.+.+++.++.+++   ..++.++.+.||...|.+.... ......         .      ...+..++|
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  226 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI-TYSLARIKYGLQDKLVLGNLNAKRDWGYAPE  226 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH-HHHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH-HHHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence            67899999999999999999876   3456778888998877642211 100000         0      112667999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|+++++++..+.    ++.|.+.++
T Consensus       227 va~a~~~~~~~~~----~~~~~i~~~  248 (345)
T 2z1m_A          227 YVEAMWLMMQQPE----PDDYVIATG  248 (345)
T ss_dssp             HHHHHHHHHTSSS----CCCEEECCS
T ss_pred             HHHHHHHHHhCCC----CceEEEeCC
Confidence            9999999997543    366766544

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=2.3e-26  Score=202.06  Aligned_cols=200  Identities=16%  Similarity=0.124  Sum_probs=150.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++|+++||||+||||++++++|+++|+  +|++++|+++++++..        ...+.++.+|++|.++++++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc----
Confidence            5689999999999999999999999999  9999999976533211        1257788999999988876654    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         ++|+||||||....     .+.++..+++|+.++..+++++.    +. +.++||++||.+++.             
T Consensus        84 ---~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~----~~-~~~~iv~~SS~~~~~-------------  137 (242)
T 2bka_A           84 ---GHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAK----AG-GCKHFNLLSSKGADK-------------  137 (242)
T ss_dssp             ---SCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHH----HT-TCCEEEEECCTTCCT-------------
T ss_pred             ---CCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHH----HC-CCCEEEEEccCcCCC-------------
Confidence               69999999997532     23567889999999988888653    33 467999999988763             


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCe-EEEEeeCCcccCCCccCcch-hHHHHH---------hccCCCHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGI-GFYSMHPGWAETPGVAKSMP-SFNERF---------AGNLRTSEEGADT  285 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~~~~~~-~~~~~~---------~~~~~~~~e~A~~  285 (339)
                       +....|+++|++++.+++.+       ++ ++++|+||++.|++...... ......         .+++..++|+|+.
T Consensus       138 -~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  209 (242)
T 2bka_A          138 -SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRA  209 (242)
T ss_dssp             -TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHH
T ss_pred             -CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHH
Confidence             12357999999999988754       56 79999999999996532211 111111         2345689999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ++++++++..   .|.+++++.
T Consensus       210 ~~~~~~~~~~---~~~~~~~~~  228 (242)
T 2bka_A          210 MLNNVVRPRD---KQMELLENK  228 (242)
T ss_dssp             HHHHHTSCCC---SSEEEEEHH
T ss_pred             HHHHHhCccc---cCeeEeeHH
Confidence            9999976543   345555543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=1.2e-24  Score=188.62  Aligned_cols=190  Identities=13%  Similarity=0.107  Sum_probs=144.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLA-SRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~-~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|+++||||+||||++++++|+ +.|++|++++|+++ ++++..    ..  ..++.++.+|++|.++++++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc------
Confidence            3789999999999999999999 89999999999987 554332    11  3478899999999999988875      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       .+|+||||||..                 |+.     ++.+++.|++. +.++||++||.+++..            .+
T Consensus        73 -~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~-~~~~iv~iSs~~~~~~------------~~  116 (221)
T 3r6d_A           73 -NAEVVFVGAMES-----------------GSD-----MASIVKALSRX-NIRRVIGVSMAGLSGE------------FP  116 (221)
T ss_dssp             -TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHT-TCCEEEEEEETTTTSC------------SC
T ss_pred             -CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhc-CCCeEEEEeeceecCC------------CC
Confidence             689999999853                 322     78888888776 5689999999887642            22


Q ss_pred             chH----------HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-hH-HHHHhccCCCHHHHHHHH
Q 019551          219 GME----------QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-SF-NERFAGNLRTSEEGADTV  286 (339)
Q Consensus       219 ~~~----------~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~-~~~~~~~~~~~~e~A~~v  286 (339)
                      ...          .|+.+|.+++.+.+.       .||+++.|+||++.++....... .. .....+.+.+++|+|+.+
T Consensus       117 ~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  189 (221)
T 3r6d_A          117 VALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAI  189 (221)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHH
T ss_pred             cccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHHHHHHHH
Confidence            222          799999999987753       68999999999999873222111 10 011123357899999999


Q ss_pred             HHHh--ccCCCCCCCcceeeCC
Q 019551          287 LWLA--LQPKEKLVSGSFYFDR  306 (339)
Q Consensus       287 ~~l~--s~~~~~~~~G~~~~d~  306 (339)
                      ++++  +++. .+.++.+.+.+
T Consensus       190 ~~l~~~~~~~-~~~~~~~~i~~  210 (221)
T 3r6d_A          190 FDILHAADET-PFHRTSIGVGE  210 (221)
T ss_dssp             HHHHTCSCCG-GGTTEEEEEEC
T ss_pred             HHHHHhcChh-hhhcceeeecC
Confidence            9999  7544 46677776653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.3e-24  Score=199.09  Aligned_cols=234  Identities=16%  Similarity=0.150  Sum_probs=169.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++++|||||+|+||++++++|+++|++|++++|+.++.....+.+.   ...++.++.+|++|.+++.++++..    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            568999999999999999999999999999999998765544433332   1246888999999999999998865    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       ++|+||||||...  ...+.++++..+++|+.++..+++++.+.    +..+++|++||.+.+..........+..+..
T Consensus        80 -~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             -CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence             6999999999632  11245667889999999999999998653    1357999999988764321100111112344


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHc------CCCeEEEEeeCCcccCCCccC---cchhHHHHHh-------------ccC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYK------EKGIGFYSMHPGWAETPGVAK---SMPSFNERFA-------------GNL  276 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~------~~gI~v~~v~PG~v~T~~~~~---~~~~~~~~~~-------------~~~  276 (339)
                      +...|+.||++.+.+++.++.++.      +.|++++.++||.+.+|....   ..+.......             ..+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            567899999999999999999885      458999999999999986421   1222222111             124


Q ss_pred             CCHHHHHHHHHHHhccC--CCCCCCcceeeCC
Q 019551          277 RTSEEGADTVLWLALQP--KEKLVSGSFYFDR  306 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~--~~~~~~G~~~~d~  306 (339)
                      ...+|+|++++.++...  .....++.|.+.+
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~  264 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP  264 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECC
Confidence            56899999999988531  1112355666643

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=4.2e-24  Score=195.41  Aligned_cols=220  Identities=15%  Similarity=0.183  Sum_probs=164.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +.+++|||||+|+||++++++|+++|++|++++|+.+. +.    +       ++.++.+|++|.+++.++++.     +
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----~   73 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----I   73 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----H
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----c
Confidence            46899999999999999999999999999999998754 11    1       578889999999999988875     3


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc-CccccccCCCCc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL-TDDLEFNSGSFD  218 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~-~~~~~~~~~~~~  218 (339)
                      ++|+||||||.....  .+.++++..+++|+.++..+++++ +.+.   +.++||++||.+.+.... ......+..+.+
T Consensus        74 ~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~  147 (321)
T 2pk3_A           74 KPDYIFHLAAKSSVK--DSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRILTIGSSEEYGMILPEESPVSEENQLR  147 (321)
T ss_dssp             CCSEEEECCSCCCHH--HHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred             CCCEEEEcCcccchh--hhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence            699999999975421  234567889999999999999998 5542   468999999987764320 000111112345


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHH-------------------hccCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERF-------------------AGNLR  277 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~-------------------~~~~~  277 (339)
                      +...|+.||++.+.+++.++.++   |++++.++||.+.+|.....  .+......                   ...+.
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v  224 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT  224 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeE
Confidence            56789999999999999998875   89999999999999876432  11111111                   01245


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++|+|+++++++..+   ..++.|.+++++
T Consensus       225 ~v~Dva~a~~~~~~~~---~~g~~~~i~~~~  252 (321)
T 2pk3_A          225 DVRDIVQAYWLLSQYG---KTGDVYNVCSGI  252 (321)
T ss_dssp             EHHHHHHHHHHHHHHC---CTTCEEEESCSC
T ss_pred             EHHHHHHHHHHHHhCC---CCCCeEEeCCCC
Confidence            7999999999999754   245667776654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=5.9e-25  Score=202.20  Aligned_cols=219  Identities=14%  Similarity=0.151  Sum_probs=152.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++++++|||||+|+||++++++|+++|++|++++|+.+...+..+++      .++.++.+|++|.++++++++++  
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~~~~~~--   87 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLERAFDSF--   87 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHHHHhhc--
Confidence            3478999999999999999999999999999999999764322111111      36888999999999999988865  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         ++|+||||||.....   +.++++  +++|+.++..+++++..    . +.++||++||.+.+......+.+.....
T Consensus        88 ---~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~----~-~~~~iV~~SS~~~~~~~~~~~~~~~E~~  154 (330)
T 2pzm_A           88 ---KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASK----A-GVKRLLNFQTALCYGRPATVPIPIDSPT  154 (330)
T ss_dssp             ---CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHH----H-TCSEEEEEEEGGGGCSCSSSSBCTTCCC
T ss_pred             ---CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHH----c-CCCEEEEecCHHHhCCCccCCCCcCCCC
Confidence               799999999986543   445555  99999999999998863    2 4679999999987643210000000010


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeE-EEEeeCCcccCCCccCcchhHHHHH-----------hccCCCHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIG-FYSMHPGWAETPGVAKSMPSFNERF-----------AGNLRTSEEGAD  284 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~-v~~v~PG~v~T~~~~~~~~~~~~~~-----------~~~~~~~~e~A~  284 (339)
                       .+...|+.+|++.+.+++.+  ++....|| ++.+.||. .|++.    +......           ...+..++|+|+
T Consensus       155 -~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  226 (330)
T 2pzm_A          155 -APFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPI----PTFYKRLKAGQKCFCSDTVRDFLDMSDFLA  226 (330)
T ss_dssp             -CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHH----HHHHHHHHTTCCCCEESCEECEEEHHHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHH----HHHHHHHHcCCEEeCCCCEecceeHHHHHH
Confidence             24568999999999999876  33333444 44455553 22221    1111110           134568999999


Q ss_pred             -HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 -TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 -~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       ++++++..+.    ++.|.+++++
T Consensus       227 ~a~~~~~~~~~----g~~~~v~~~~  247 (330)
T 2pzm_A          227 IADLSLQEGRP----TGVFNVSTGE  247 (330)
T ss_dssp             HHHHHTSTTCC----CEEEEESCSC
T ss_pred             HHHHHHhhcCC----CCEEEeCCCC
Confidence             9999987532    6677777664

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=2.4e-23  Score=192.14  Aligned_cols=229  Identities=13%  Similarity=0.118  Sum_probs=164.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+..   ..++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999853 233333344432   235788999999999999988763     6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc-----------
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD-----------  209 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~-----------  209 (339)
                      +|+||||||....  ..+.++++..+++|+.++..+++++.+.+.    .++||++||.+.+......+           
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999999997532  123457788999999999999999877642    36999999988764321110           


Q ss_pred             ----ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----chhHHH-----H----
Q 019551          210 ----LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----MPSFNE-----R----  271 (339)
Q Consensus       210 ----~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----~~~~~~-----~----  271 (339)
                          ...+..+..+...|+.||++.+.+++.++.++   |++++.++||++.+|.....     .+....     .    
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                00111234466799999999999999999886   79999999999999875321     111111     1    


Q ss_pred             -Hhc---------cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          272 -FAG---------NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       272 -~~~---------~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       +..         .+..++|+|+++++++..+ ....++.|.++++.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhcc-ccCCCCEEEeCCCC
Confidence             111         1447999999999998631 12234466677654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=3e-23  Score=190.92  Aligned_cols=224  Identities=17%  Similarity=0.145  Sum_probs=162.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++   ....++.++.+|++|.+++++++.    
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYELVKELVR----   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHHHHHHHhh----
Confidence            5689999999999999999999997  89999998742  11111 111   113468899999999999988873    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         ++|+||||||....  ..+.++++..+++|+.++..+++++.+.   . ..++||++||.+.+...... ...+..+
T Consensus        75 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~~~~-~~~E~~~  144 (336)
T 2hun_A           75 ---KVDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVSTDEVYGDILKG-SFTENDR  144 (336)
T ss_dssp             ---TCSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCCCSSS-CBCTTBC
T ss_pred             ---CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEeccHHHHCCCCCC-CcCCCCC
Confidence               79999999997541  1234567889999999999999998776   1 24799999998766432111 1111123


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHHh--------------ccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFA--------------GNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~--------------~~~~~~~  280 (339)
                      .++...|+.||++.+.+++.++.++   |++++.++||.+.+|.....  .+.......              ..+..++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            4456789999999999999998875   79999999999999875321  122211111              2345689


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+++++++..+   ..++.|.++++.
T Consensus       222 Dva~~~~~~~~~~---~~g~~~~v~~~~  246 (336)
T 2hun_A          222 DHVRAIELVLLKG---ESREIYNISAGE  246 (336)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCC
Confidence            9999999998643   235567776654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.91  E-value=4.9e-23  Score=190.93  Aligned_cols=230  Identities=13%  Similarity=0.071  Sum_probs=165.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++++++|||||+|+||++++++|+++|++|++++|+..    .++...+++.... ..++.++.+|++|.+++.++++  
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ-WSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH-HTTEEEEECCTTSHHHHHHHHT--
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc-CCceEEEECCCCCHHHHHHHhc--
Confidence            56889999999999999999999999999999999764    2332222221110 1368899999999999888775  


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                           ++|+||||||.....  .+.++++..+++|+.++..+++++.+.     +.+++|++||.+.+......+ ..+.
T Consensus       102 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~-~~E~  168 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDHPGLP-KVED  168 (352)
T ss_dssp             -----TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSS-BCTT
T ss_pred             -----CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhcCCCCCCC-CCCC
Confidence                 799999999975321  234667889999999999999988542     457999999988775421111 1111


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHHh--------------c
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERFA--------------G  274 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~~--------------~  274 (339)
                      .+..+...|+.+|++.+.+++.++.++   |++++.++||.+.+|.....      .+.......              .
T Consensus       169 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (352)
T 1sb8_A          169 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  245 (352)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceE
Confidence            223345789999999999999998876   79999999999999875422      122211111              1


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+..++|+|+++++++..+ ....++.|.+.+++
T Consensus       246 ~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~  278 (352)
T 1sb8_A          246 DFCYIENTVQANLLAATAG-LDARNQVYNIAVGG  278 (352)
T ss_dssp             CCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSC
T ss_pred             eeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCC
Confidence            2456999999999998642 22345667776554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=1.8e-23  Score=191.61  Aligned_cols=247  Identities=14%  Similarity=0.018  Sum_probs=176.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHH-HCCCEEEEEecCchh------------HHHHHHHHHhhcCCccEEEEeccCCCHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLA-SRGATVYMVCRSKEK------------GETALSAIRSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~-~~G~~Vvl~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      ..+|+|||||||+|||+|++..|+ +.|++|+++++..+.            .....+++.+.  +.+...+.||+++.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCHH
Confidence            568999999999999999999999 689999999886542            22334445444  347889999999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEccccccCCC------------------------------------CCChhhhhh---hh
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGVLENNR------------------------------------LITSEGFEL---NF  166 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~~~~~~------------------------------------~~~~~~~~~---~~  166 (339)
                      +++++++++.+.+|+||+||||+|......                                    ..+.++++.   .|
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            999999999999999999999999753110                                    012333343   34


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch--HHHHHhHHHHHHHHHHHHHHHcCC
Q 019551          167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM--EQYARNKRVQVALTEKWSEMYKEK  244 (339)
Q Consensus       167 ~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~l~~~la~e~~~~  244 (339)
                      .......+...+...++|.   ++++++..|+.+...            ..|.+  ..++++|++|++.++.|+.|++  
T Consensus       206 g~s~~s~w~~al~~a~lla---~G~siva~SYiGse~------------t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--  268 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLE---EGCITLAYSYIGPEA------------TQALYRKGTIGKAKEHLEATAHRLNKENP--  268 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEE---EEEEEEEEECCCCGG------------GHHHHTTSHHHHHHHHHHHHHHHHHHHCT--
T ss_pred             hhhHHHHHHHHHHhhhccc---CCceEEEEeccCcce------------eecCCCccHHHHHHHHHHHHHHHHHHhcC--
Confidence            4455556666666666664   469999999987652            22333  4789999999999999999997  


Q ss_pred             CeEEEEeeCCcccCCCccCc--chhHH---HHHhccCCCHHHHHHHHHHHhccCCC------CC-CCcceeeCCCCCCcc
Q 019551          245 GIGFYSMHPGWAETPGVAKS--MPSFN---ERFAGNLRTSEEGADTVLWLALQPKE------KL-VSGSFYFDRAEAPKH  312 (339)
Q Consensus       245 gI~v~~v~PG~v~T~~~~~~--~~~~~---~~~~~~~~~~~e~A~~v~~l~s~~~~------~~-~~G~~~~d~~~~~~~  312 (339)
                      ++++|+++||.+.|......  +|...   ...++..++-|.+.+.+..|..+.-.      .. -.|.+.+|..|... 
T Consensus       269 ~~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk~~g~heg~ieq~~rl~~~~ly~~~~~~~~D~~~r~r~d~~el~~-  347 (401)
T 4ggo_A          269 SIRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMKEKGNHEGCIEQITRLYAERLYRKDGTIPVDEENRIRIDDWELEE-  347 (401)
T ss_dssp             TEEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCCCCCCTTSCEESCTTTTCH-
T ss_pred             CCcEEEEEcCccccchhhcCCCchHHHHHHHHHHHhcCCCCchHHHHHHHHHHhhccCCCCCCcCCCCCccCchhhcCH-
Confidence            48999999999999765432  23222   22345557788888888888864221      11 13556666666544 


Q ss_pred             cccccccCCHHHHHHHHHHH
Q 019551          313 LKFAATAASHARIDPIVDVL  332 (339)
Q Consensus       313 ~~~~~~~~~~~~~~~l~~~~  332 (339)
                             .-++...+||+.+
T Consensus       348 -------~vq~~v~~~~~~~  360 (401)
T 4ggo_A          348 -------DVQKAVSALMEKV  360 (401)
T ss_dssp             -------HHHHHHHHHHHHC
T ss_pred             -------HHHHHHHHHHHHh
Confidence                   3356667777654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=1.2e-23  Score=185.47  Aligned_cols=211  Identities=13%  Similarity=0.086  Sum_probs=151.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++|+++||||+|+||++++++|+++  |++|++++|++++.++.         ..++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            35789999999999999999999999  89999999997654322         2356788999999999988875    


Q ss_pred             CCCCccEEEEccccccCC-----------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc
Q 019551          137 KNKPVHVLVNNAGVLENN-----------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH  205 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~  205 (339)
                         .+|+||||||.....           .....+.+++.+++|+.++..+++++.+    . +.++||++||.++....
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~~~~~~  140 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----A-GVKHIVVVGSMGGTNPD  140 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----H-TCSEEEEEEETTTTCTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----c-CCCEEEEEcCccCCCCC
Confidence               589999999976421           1122345567889999999988887643    2 45799999998765221


Q ss_pred             cCccccccCCCCc--chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHH---hccCCC
Q 019551          206 LTDDLEFNSGSFD--GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERF---AGNLRT  278 (339)
Q Consensus       206 ~~~~~~~~~~~~~--~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~---~~~~~~  278 (339)
                               .+..  +...|+.+|++.+.+++.       .||+++.++||++.++.....  ........   ...+..
T Consensus       141 ---------~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
T 1xq6_A          141 ---------HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVP  204 (253)
T ss_dssp             ---------CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEE
T ss_pred             ---------CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEc
Confidence                     0111  123588899999887752       689999999999999853211  11000011   123568


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++|+|+.+++++..+.  ..++.|.+++++
T Consensus       205 ~~Dva~~~~~~~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          205 RADVAEVCIQALLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred             HHHHHHHHHHHHcCcc--ccCCEEEecCCC
Confidence            9999999999987543  234567776543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=4.1e-23  Score=191.84  Aligned_cols=229  Identities=16%  Similarity=0.172  Sum_probs=165.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASR-GATVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|||||+|+||++++++|++. |++|++++|+..  ..+.. +++.   ...++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5899999999999999999998 799999998752  22111 1111   1346889999999999999988763     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh----CCCCEEEEEcCccccccccCcc------
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA----APDARVITVSSGGMYTAHLTDD------  209 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~----~~~~~Iv~vsS~~~~~~~~~~~------  209 (339)
                      ++|+||||||....  ..+.++++..+++|+.++..+++++.+.|..-    +.+++||++||.+.+......+      
T Consensus        73 ~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            79999999997541  12446678899999999999999999987531    0135999999987654321000      


Q ss_pred             ---ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHH-h----------
Q 019551          210 ---LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERF-A----------  273 (339)
Q Consensus       210 ---~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~-~----------  273 (339)
                         ...+..+.++...|+.||++.+.+++.++.++   |++++.++||.+.+|.....  .+...... .          
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence               11111234556789999999999999999886   79999999999999875321  12211111 1          


Q ss_pred             ---ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 ---GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 ---~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                         ..+..++|+|+++++++..+   ..++.|.++++.
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~  262 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHN  262 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCC
T ss_pred             ceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCC
Confidence               12456999999999998643   235567776654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1e-22  Score=187.63  Aligned_cols=216  Identities=12%  Similarity=0.106  Sum_probs=153.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      .++|||||+|+||++++++|+++|++|++++|++++.+.    +.    ..++.++.+|++|.+++.++++       .+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            479999999999999999999999999999998765432    11    1257889999999998887765       69


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc--
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG--  219 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~--  219 (339)
                      |+||||||...    .+.++++..+++|+.++..+++++.+.     +.+++|++||.+.+........+.+..+..+  
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            99999999754    234567888999999999999988764     4579999999887754221001111122223  


Q ss_pred             --hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc-cCcchhHHHHHh-c----------cCCCHHHHHHH
Q 019551          220 --MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV-AKSMPSFNERFA-G----------NLRTSEEGADT  285 (339)
Q Consensus       220 --~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~-~~~~~~~~~~~~-~----------~~~~~~e~A~~  285 (339)
                        ...|+.+|++.+.+++.++.   . |++++.++||.+.++.. ....+....... +          .+..++|+|++
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  225 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRG  225 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHH
Confidence              66899999999999999875   3 89999999999999865 211222222211 1          14579999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++++..+..   ++.|.+.+++
T Consensus       226 ~~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          226 LLMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHHhCCCC---CceEEEcCCc
Confidence            9999975432   5677777665

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.90  E-value=1.1e-23  Score=184.70  Aligned_cols=203  Identities=16%  Similarity=0.209  Sum_probs=138.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +..|++|||||+||||++++++|+++| ++|++++|+++++++.        ....+.++.+|++|.++++++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-----
Confidence            445899999999999999999999999 8999999998764321        12468899999999999998876     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc-cCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF-NSGS  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~-~~~~  216 (339)
                        .+|+||||||...                    ....++.+++.|++. +.++||++||.+++.......... ....
T Consensus        88 --~~D~vv~~a~~~~--------------------~~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           88 --GQDIVYANLTGED--------------------LDIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             --TCSEEEEECCSTT--------------------HHHHHHHHHHHHHHT-TCCEEEEECCCCC----------------
T ss_pred             --CCCEEEEcCCCCc--------------------hhHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccccchhhcc
Confidence              6899999998511                    113466888888776 568999999988764321100000 0011


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      ......|..+|.+           +.+.||++++|+||++.|+........ ....+.+++.+++|+|++++++++++. 
T Consensus       145 ~~~~~~~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~-  212 (236)
T 3qvo_A          145 GEPLKPFRRAADA-----------IEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPE-  212 (236)
T ss_dssp             CGGGHHHHHHHHH-----------HHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTT-
T ss_pred             cchHHHHHHHHHH-----------HHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcc-
Confidence            1234456555433           236799999999999998754322110 011122456789999999999998654 


Q ss_pred             CCCCcceeeCCCCC
Q 019551          296 KLVSGSFYFDRAEA  309 (339)
Q Consensus       296 ~~~~G~~~~d~~~~  309 (339)
                      .+.++.|.++++..
T Consensus       213 ~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          213 KHIGENIGINQPGT  226 (236)
T ss_dssp             TTTTEEEEEECSSC
T ss_pred             cccCeeEEecCCCC
Confidence            35677787876653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=1e-22  Score=187.55  Aligned_cols=226  Identities=17%  Similarity=0.161  Sum_probs=154.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..++.. .+.+... ..++.++.+|++|.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            35789999999999999999999999999999999877543322 1111100 1258889999999998887765     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC-
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS-  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~-  216 (339)
                        .+|+|||+|+...   ....+..+..+++|+.|+..+++++.+..    ..++||++||.+++.............. 
T Consensus        77 --~~d~Vih~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           77 --GCTGVFHVATPMD---FESKDPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             --TCSEEEECCCCCC---SSCSSHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             --CCCEEEEeccccC---CCCCChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcccCCCCCcccCcccC
Confidence              5899999998652   11223345689999999999999886542    2579999999875432111100111110 


Q ss_pred             ---------CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-HH--------------H
Q 019551          217 ---------FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-ER--------------F  272 (339)
Q Consensus       217 ---------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~--------------~  272 (339)
                               .+....|+.||++.+.+++.++.+   .||++++++||.|.+|......+... ..              .
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  224 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIR  224 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHT
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccC
Confidence                     012347999999999988777654   48999999999999987543222111 00              0


Q ss_pred             hccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          273 AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      ..++..++|+|+++++++..+.   .+|.|+..
T Consensus       225 ~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~  254 (337)
T 2c29_D          225 QGQFVHLDDLCNAHIYLFENPK---AEGRYICS  254 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHCTT---CCEEEEEC
T ss_pred             CCCEEEHHHHHHHHHHHhcCcc---cCceEEEe
Confidence            1236789999999999986432   34556543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.90  E-value=6.4e-24  Score=183.86  Aligned_cols=199  Identities=16%  Similarity=0.175  Sum_probs=149.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~i  141 (339)
                      +++||||+|+||++++++|+++|++|++++|++++.+..          .++.++.+|++| .+++.++++       .+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            689999999999999999999999999999998653321          368999999999 888776654       69


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||...          ...+++|+.++..+++++.    +. +.+++|++||..+..+....+     .+..+..
T Consensus        65 d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~----~~-~~~~iv~~SS~~~~~~~~~~e-----~~~~~~~  124 (219)
T 3dqp_A           65 DAIINVSGSGG----------KSLLKVDLYGAVKLMQAAE----KA-EVKRFILLSTIFSLQPEKWIG-----AGFDALK  124 (219)
T ss_dssp             SEEEECCCCTT----------SSCCCCCCHHHHHHHHHHH----HT-TCCEEEEECCTTTTCGGGCCS-----HHHHHTH
T ss_pred             CEEEECCcCCC----------CCcEeEeHHHHHHHHHHHH----Hh-CCCEEEEECcccccCCCcccc-----ccccccc
Confidence            99999999865          2278899999999888763    33 457999999987764311000     0112367


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCCcc
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVSGS  301 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~  301 (339)
                      .|+.+|++.+.+.+      ...|++++.++||++.++.........  .....+..++|+|+.+++++..+.  ..++.
T Consensus       125 ~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~--~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~  194 (219)
T 3dqp_A          125 DYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDIN--DEVSASNTIGDVADTIKELVMTDH--SIGKV  194 (219)
T ss_dssp             HHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEES--SSCCCCEEHHHHHHHHHHHHTCGG--GTTEE
T ss_pred             HHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccC--CCcCCcccHHHHHHHHHHHHhCcc--ccCcE
Confidence            89999999998876      367999999999999987544332110  122346789999999999997543  33556


Q ss_pred             eeeCCCC
Q 019551          302 FYFDRAE  308 (339)
Q Consensus       302 ~~~d~~~  308 (339)
                      |.+++++
T Consensus       195 ~~i~~g~  201 (219)
T 3dqp_A          195 ISMHNGK  201 (219)
T ss_dssp             EEEEECS
T ss_pred             EEeCCCC
Confidence            7675554

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=7.1e-23  Score=189.24  Aligned_cols=231  Identities=14%  Similarity=0.123  Sum_probs=160.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+++++||||||+|+||.+++++|+++|  ++|++.+|......  .+.+.......++.++.+|++|.+++.++++.. 
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            3678899999999999999999999999  67888887642111  112222222357899999999999999998864 


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          ++|+||||||......  +.+.++..+++|+.++..+++++...     +.+++|++||.+.+..........+..
T Consensus        98 ----~~d~Vih~A~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vy~~~~~~~~~~E~~  166 (346)
T 4egb_A           98 ----DVQVIVNFAAESHVDR--SIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVSTDEVYGSLGKTGRFTEET  166 (346)
T ss_dssp             ----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEEGGGGCCCCSSCCBCTTS
T ss_pred             ----CCCEEEECCcccchhh--hhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCchHHhCCCCcCCCcCCCC
Confidence                6999999999865332  44667788999999999999887442     457899999988775432111122223


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHHh--------------ccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFA--------------GNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~--------------~~~~~~  279 (339)
                      +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....  .+.......              ..+..+
T Consensus       167 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  243 (346)
T 4egb_A          167 PLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHV  243 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEH
Confidence            44456789999999999999998875   79999999999999865321  222222211              112348


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+++++++..+.   .++.|.+.+++
T Consensus       244 ~Dva~a~~~~~~~~~---~g~~~~i~~~~  269 (346)
T 4egb_A          244 TDHCSAIDVVLHKGR---VGEVYNIGGNN  269 (346)
T ss_dssp             HHHHHHHHHHHHHCC---TTCEEEECCSC
T ss_pred             HHHHHHHHHHHhcCC---CCCEEEECCCC
Confidence            999999999987543   45567676654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=1e-22  Score=188.21  Aligned_cols=218  Identities=16%  Similarity=0.143  Sum_probs=156.8

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..+.++|+||||||+|+||.+++++|+++|++|++++|+.+.              .++.++.+|++|.+++.++++   
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh---
Confidence            345788999999999999999999999999999999998764              356788999999999988776   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc-cccC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL-EFNS  214 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~-~~~~  214 (339)
                          .+|+|||+||....    +.+.++..+++|+.++..+++++..    . +.++||++||.+.+........ ..+.
T Consensus        77 ----~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~V~~SS~~vyg~~~~~~~~~~E~  143 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASA----A-GVRRFVFASSGEVYPENRPEFLPVTED  143 (347)
T ss_dssp             ----TCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEGGGTTTTSCSSSSBCTT
T ss_pred             ----CCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEECCHHHhCCCCCCCCCcCCC
Confidence                79999999997643    3455688999999999999998743    2 4679999999877754211111 1122


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc-------------CCCccC-------------cchhH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE-------------TPGVAK-------------SMPSF  268 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~-------------T~~~~~-------------~~~~~  268 (339)
                      .+..+...|+.+|.+.+.+++.++.+   .|++++.++|+.+.             .|....             ..+..
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~  220 (347)
T 4id9_A          144 HPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAEL  220 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHH
Confidence            34455678999999999999998887   48999999999998             332110             01111


Q ss_pred             HHHHh--------------ccC----CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          269 NERFA--------------GNL----RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       269 ~~~~~--------------~~~----~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .....              ..+    ..++|+|+++++++..+.  ..++.|.+.+++
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~  276 (347)
T 4id9_A          221 LQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADE  276 (347)
T ss_dssp             HHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSS
T ss_pred             HHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCC
Confidence            11110              123    668999999999997543  235667676554

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=4.9e-23  Score=175.92  Aligned_cols=202  Identities=13%  Similarity=0.122  Sum_probs=145.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++++||||+|+||++++++|+++|++|++++|++++.+..        ...++.++.+|++|.+++.++++       .
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------C
Confidence            47899999999999999999999999999999998653211        02468889999999999888765       5


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|++|||||.....      ++   .++|+.++..+++++..    . +.+++|++||.+.+....        ....+.
T Consensus        68 ~d~vi~~a~~~~~~------~~---~~~n~~~~~~~~~~~~~----~-~~~~~v~~Ss~~~~~~~~--------~~~~~~  125 (206)
T 1hdo_A           68 QDAVIVLLGTRNDL------SP---TTVMSEGARNIVAAMKA----H-GVDKVVACTSAFLLWDPT--------KVPPRL  125 (206)
T ss_dssp             CSEEEECCCCTTCC------SC---CCHHHHHHHHHHHHHHH----H-TCCEEEEECCGGGTSCTT--------CSCGGG
T ss_pred             CCEEEECccCCCCC------Cc---cchHHHHHHHHHHHHHH----h-CCCeEEEEeeeeeccCcc--------cccccc
Confidence            89999999976431      11   24788888877776643    3 457999999987663210        001157


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc-cCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCCCCCC
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEKLVS  299 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~~~~~  299 (339)
                      ..|+.+|++++.+.+       ..|++++.++||++ .++............+.+.+.+++|+|+.+++++.++.  ..+
T Consensus       126 ~~y~~~K~~~e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  196 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDG  196 (206)
T ss_dssp             HHHHHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST--TTT
T ss_pred             hhHHHHHHHHHHHHH-------hCCCCEEEEeCCcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhcCcc--ccc
Confidence            789999999998874       26899999999999 34432221111100011356789999999999997543  445


Q ss_pred             cceeeCCCC
Q 019551          300 GSFYFDRAE  308 (339)
Q Consensus       300 G~~~~d~~~  308 (339)
                      +.|.++++.
T Consensus       197 ~~~~i~~g~  205 (206)
T 1hdo_A          197 HSTYPSHQY  205 (206)
T ss_dssp             CEEEEECCC
T ss_pred             cceeeeccc
Confidence            567777653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=2.2e-22  Score=185.97  Aligned_cols=184  Identities=15%  Similarity=0.123  Sum_probs=136.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh------HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK------GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+++.... +.++.++.+|++|.++++++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5799999999999999999999999999999986432      222333333221 246788999999999999888753


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                           ++|+||||||.....  .+.++++..+++|+.++..+++++.    +. +.++||++||.+.+............
T Consensus        81 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~iv~~SS~~~~g~~~~~~~~E~~  148 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMK----AH-GVKNLVFSSSATVYGNPQYLPLDEAH  148 (348)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             -----CCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHH----Hh-CCCEEEEECcHHHhCCCCCCCcCCCC
Confidence                 799999999975421  1345678899999999999988653    33 45799999998776432111110011


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      ...+....|+.||++.+.+++.++.+  ..++++..++|+.+..|
T Consensus       149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence            11233678999999999999999887  35699999999998876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=3.7e-22  Score=187.80  Aligned_cols=186  Identities=16%  Similarity=0.152  Sum_probs=139.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HCCCEEEEEecCchh---------HHHHHHHHHhhcC---Ccc---EEEEeccCCCH
Q 019551           61 GKNCVVTGANAGIGYATAEGLA-SRGATVYMVCRSKEK---------GETALSAIRSKTG---NEN---VHLELCDLSSI  124 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~-~~G~~Vvl~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~Dl~~~  124 (339)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+...+.+.+..+   ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999997654         3333322332221   124   88999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA  204 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~  204 (339)
                      +++.+++++    ++++|+||||||.....  .+.++++..+++|+.++..+++++.    +. +.++||++||.+.+..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~----~~-~~~~iv~~SS~~v~g~  150 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAML----LH-KCDKIIFSSSAAIFGN  150 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEEEEGGGTBS
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHH----Hh-CCCEEEEECCHHHhCC
Confidence            999888764    35699999999976422  1345678899999999999999753    22 4579999999876643


Q ss_pred             ccC------ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          205 HLT------DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       205 ~~~------~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      ...      .....+..+..+...|+.||++.+.+++.++.++   |++++.++||.+.+|.
T Consensus       151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            220      0111111223346789999999999999999887   8999999999998774

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=1.8e-22  Score=187.91  Aligned_cols=224  Identities=14%  Similarity=0.068  Sum_probs=157.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHH--CCCEEEEEecCchhHHHHH------HHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLAS--RGATVYMVCRSKEKGETAL------SAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~--~G~~Vvl~~r~~~~~~~~~------~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      .++++|+||||||+|+||++++++|++  .|++|++++|+.+......      ..... ..+.++.++.+|++|.++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN-LIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG-GTTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh-ccccCceEEECCCCCHHHHH
Confidence            357899999999999999999999999  9999999999765211100      00111 12345789999999999988


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      ++      ...++|+||||||....    +.+.++..+++|+.++..+++++..    .  +++||++||.+.+..... 
T Consensus        85 ~~------~~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~vyg~~~~-  147 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGVYGNTKA-  147 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGGCSCCS-
T ss_pred             Hh------hccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHHhCCCCC-
Confidence            76      23589999999996542    4567889999999999999998732    2  356999999777654221 


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHHh---------
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERFA---------  273 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~~---------  273 (339)
                       ...+..+..+...|+.||++.+.+++.++.+     +++..++|+.+..|.....      .+.......         
T Consensus       148 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (362)
T 3sxp_A          148 -PNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE  221 (362)
T ss_dssp             -SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred             -CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence             1111223345678999999999999887655     7788888888887754321      122222111         


Q ss_pred             -----ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 -----GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 -----~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                           ..+..++|+|+++++++..+.    .|.|.+.+++
T Consensus       222 ~g~~~~~~i~v~Dva~ai~~~~~~~~----~g~~~i~~~~  257 (362)
T 3sxp_A          222 FGEQLRDFVYIEDVIQANVKAMKAQK----SGVYNVGYSQ  257 (362)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHTTCSS----CEEEEESCSC
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhcCC----CCEEEeCCCC
Confidence                 124459999999999987542    4567676554

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=6.5e-23  Score=182.90  Aligned_cols=192  Identities=15%  Similarity=0.165  Sum_probs=147.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||+|+||++++++|+++|++|++++|++++..           ..++.++.+|++|.+++.++++       .+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999875310           1257889999999999888775       58


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||..      +.+.++..+++|+.++..+++++.+    . +.++||++||...+..........+..+..+..
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARN----L-GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHH----T-TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999976      2355788999999999999998754    2 457999999988764321111111112333457


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc-cCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA-ETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      .|+.+|++.+.+++.++.   +.||+++.++||++ .++..    .    .....+..++|+|+.++.++..+
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~----~----~~~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKD----A----RMMATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCS----H----HHHHHBCCHHHHHHHHHHHHHSS
T ss_pred             hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCC----C----CeeeccccHHHHHHHHHHHHhCC
Confidence            899999999999998864   46899999999998 44421    1    11234689999999999998754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=4.3e-22  Score=184.30  Aligned_cols=231  Identities=13%  Similarity=0.094  Sum_probs=167.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC---ccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN---ENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +++|++|||||+|+||++++++|+++|++|++++|+........+.+....+.   .++.++.+|++|.+++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            57899999999999999999999999999999999876544444444432211   468999999999999887765   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          .+|+|||+||....  ..+.++.+..+++|+.++..+++++...     +.+++|++||.+.+......+ ..+..
T Consensus       100 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~~~~~-~~E~~  167 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSSTYGDHPALP-KVEEN  167 (351)
T ss_dssp             ----TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSS-BCTTC
T ss_pred             ----CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHHhcCCCCCCC-CccCC
Confidence                79999999996432  1234567788999999999999887432     457999999988775422111 11122


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHHh--------------cc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERFA--------------GN  275 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~~--------------~~  275 (339)
                      +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....      .+.......              ..
T Consensus       168 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  244 (351)
T 3ruf_A          168 IGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRD  244 (351)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence            33445789999999999999998875   79999999999998865322      122222111              12


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +...+|+|++++.++..+ ....++.|.+.+++
T Consensus       245 ~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~  276 (351)
T 3ruf_A          245 FCYIDNVIQMNILSALAK-DSAKDNIYNVAVGD  276 (351)
T ss_dssp             CEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSC
T ss_pred             eEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCC
Confidence            445899999999998642 22345667675543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=2.2e-22  Score=185.24  Aligned_cols=220  Identities=14%  Similarity=0.139  Sum_probs=151.2

Q ss_pred             ccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           56 QARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        56 ~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ...++++++|||||+|+||++++++|+++|++|++++|+.+...+.   +..   -.++.++.+|++|.++++++++.. 
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-   88 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADHALVNQLIGDL-   88 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCHHHHHHHHhcc-
Confidence            3457789999999999999999999999999999999986432111   110   036888999999999999888752 


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc-CccccccC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL-TDDLEFNS  214 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~-~~~~~~~~  214 (339)
                          ++|+||||||.....   +.++++  +++|+.++..+++++.+.     +.++||++||.+.+.... ....+...
T Consensus        89 ----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           89 ----QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN-----NVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             ----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             ----CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCCcccCCCCcCC
Confidence                699999999986543   334444  999999999999988652     457999999987764100 00001111


Q ss_pred             CCCcchHHHHHhHHHHHHHHHH-HHHHHcCCCeEEEEeeCCcccCCCccC-cchhHHHHH-----------hccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEK-WSEMYKEKGIGFYSMHPGWAETPGVAK-SMPSFNERF-----------AGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~-la~e~~~~gI~v~~v~PG~v~T~~~~~-~~~~~~~~~-----------~~~~~~~~e  281 (339)
                      ...+....|+.+|++.+.+++. ++        ++..++|+.+..|.... ..+......           ...+..++|
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  226 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKD  226 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHH
Confidence            1122227899999999999887 54        56778888887765211 112221111           123567999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+++++++..+.    ++.|.+++++
T Consensus       227 va~ai~~~~~~~~----g~~~~v~~~~  249 (333)
T 2q1w_A          227 LARATVRAVDGVG----HGAYHFSSGT  249 (333)
T ss_dssp             HHHHHHHHHTTCC----CEEEECSCSC
T ss_pred             HHHHHHHHHhcCC----CCEEEeCCCC
Confidence            9999999997543    5667776654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=9.4e-23  Score=186.38  Aligned_cols=223  Identities=19%  Similarity=0.178  Sum_probs=144.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ||++|||||+|+||++++++|+++|++|++++| +++..++. ..+.+... ..++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            589999999999999999999999999999998 65321110 11111100 1257888999999999888775      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC--
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS--  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~--  216 (339)
                       .+|+|||||+...   ....+.+++.+++|+.|++.+++++.+.    .+.++||++||.+++..............  
T Consensus        74 -~~d~vih~A~~~~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~  145 (322)
T 2p4h_X           74 -GCVGIFHTASPID---FAVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGSAVSFNGKDKDVLDESDWS  145 (322)
T ss_dssp             -TCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGGGTSCSSSCCSEECTTCCC
T ss_pred             -CCCEEEEcCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHHHcccCCCCCeecCCcccc
Confidence             5799999997431   1111224568999999999999987543    13579999999875432111111111110  


Q ss_pred             --------CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH----Hh--------c--
Q 019551          217 --------FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER----FA--------G--  274 (339)
Q Consensus       217 --------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~----~~--------~--  274 (339)
                              .+....|+.||++.+.+++.++.+   .||+++.++||.+.+|+.....+.....    ..        .  
T Consensus       146 ~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  222 (322)
T 2p4h_X          146 DVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRF  222 (322)
T ss_dssp             CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEE
T ss_pred             chhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCc
Confidence                    011126999999777766555433   5899999999999999754322211110    11        1  


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceee
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      .+..++|+|+++++++..+.   .+|.|..
T Consensus       223 ~~i~v~Dva~a~~~~~~~~~---~~g~~~~  249 (322)
T 2p4h_X          223 HMVHVDDVARAHIYLLENSV---PGGRYNC  249 (322)
T ss_dssp             EEEEHHHHHHHHHHHHHSCC---CCEEEEC
T ss_pred             CEEEHHHHHHHHHHHhhCcC---CCCCEEE
Confidence            26789999999999986432   3566553

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=4.7e-22  Score=183.75  Aligned_cols=223  Identities=15%  Similarity=0.158  Sum_probs=160.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      |++|||||+|+||++++++|+++  |++|++++|+.....  .+.+... ...++.++.+|++|.+++.++++       
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAI-LGDRVELVVGDIADAELVDKLAA-------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGG-CSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhh-ccCCeEEEECCCCCHHHHHHHhh-------
Confidence            68999999999999999999998  899999999753110  0011111 12478899999999999888776       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc-----------
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD-----------  208 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~-----------  208 (339)
                      .+|+||||||....  ..+.++++..+++|+.++..+++++.+.     + +++|++||.+.+......           
T Consensus        75 ~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           75 KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEecccceeCCCcccccccccccccC
Confidence            46999999997542  1234567889999999999999998765     2 499999998766432110           


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh-------------
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA-------------  273 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~-------------  273 (339)
                      ....+..+..+...|+.||++.+.+++.++.++   |++++.++||.+.+|....  ..+.......             
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  223 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCc
Confidence            011111234456789999999999999998876   7999999999999987532  1122111111             


Q ss_pred             -ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 -GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 -~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       ..+..++|+|+++++++..+   ..++.|.++++.
T Consensus       224 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~  256 (348)
T 1oc2_A          224 VRDWIHTNDHSTGVWAILTKG---RMGETYLIGADG  256 (348)
T ss_dssp             EEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred             eEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCC
Confidence             13556999999999998643   235567776653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.89  E-value=2.4e-22  Score=183.01  Aligned_cols=218  Identities=18%  Similarity=0.211  Sum_probs=155.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|+||++++++|+++|++|++++|..+...   +.+     ...+.++.+|++|.+++++++++.     .+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENV-----PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGS-----CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhc-----ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            6899999999999999999999999999998543211   001     124678899999999999888753     689


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc-cccccccCccccccCCCCcchH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG-GMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~-~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      ++|||||....  ..+.++++..+++|+.+++.+++++..    . +.++||++||. +.+..........+..+..+..
T Consensus        69 ~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           69 HVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQ----Y-GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             EEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99999986532  124466788999999999999998742    2 45799999998 4443200000111112233456


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----chhHHHHH-h------------------ccCC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----MPSFNERF-A------------------GNLR  277 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----~~~~~~~~-~------------------~~~~  277 (339)
                      .|+.||++.+.+++.++.++   |++++.++||.+.+|.....     .+...... .                  ..+.
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence            89999999999999998875   79999999999999865322     11111111 0                  1233


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++|+|+++++++..+     ++.|.+.+++
T Consensus       219 ~v~Dva~a~~~~~~~~-----~~~~~i~~~~  244 (311)
T 2p5y_A          219 YVGDVAEAHALALFSL-----EGIYNVGTGE  244 (311)
T ss_dssp             EHHHHHHHHHHHHHHC-----CEEEEESCSC
T ss_pred             EHHHHHHHHHHHHhCC-----CCEEEeCCCC
Confidence            5899999999998643     5667676554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=2.3e-21  Score=182.75  Aligned_cols=190  Identities=16%  Similarity=0.139  Sum_probs=138.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH----------------HHHHHHHhhcCCccEEEEeccCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE----------------TALSAIRSKTGNENVHLELCDLS  122 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~Dl~  122 (339)
                      ..+.+||||||+|.||++++++|+++|++|++++|+.....                +...++.... ..++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            45789999999999999999999999999999998754321                1112221111 246888999999


Q ss_pred             CHHHHHHHHHHHhcCCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc
Q 019551          123 SITEIKSFANRFSLKNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM  201 (339)
Q Consensus       123 ~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~  201 (339)
                      |.+++.++++..     ++|+||||||...... ..+.+.++..+++|+.|+..+++++.+.    +.+.+||++||.+.
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~v  158 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGE  158 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGG
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHH
Confidence            999999988865     6999999999754221 1245556778999999999999988543    12259999999877


Q ss_pred             cccccCcccc--c----------cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          202 YTAHLTDDLE--F----------NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       202 ~~~~~~~~~~--~----------~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                      +.........  +          ...+..+...|+.||++.+.+++.++.++   |+++++++||.|.+|..
T Consensus       159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            6432110000  0          00133445689999999999999998876   89999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.89  E-value=2.1e-22  Score=183.28  Aligned_cols=219  Identities=15%  Similarity=0.136  Sum_probs=158.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +++|||||+|+||++++++|+++|++|++++|+.+...+..        ...+.++.+|++|.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999876432111        246788999999987 554332       3 


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||....  ..+.++++..+++|+.++..+++++..    . +.+++|++||.+.+...... ...+..+..+..
T Consensus        64 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~vyg~~~~~-~~~e~~~~~p~~  135 (312)
T 3ko8_A           64 DVVFHFAANPEV--RLSTTEPIVHFNENVVATFNVLEWARQ----T-GVRTVVFASSSTVYGDADVI-PTPEEEPYKPIS  135 (312)
T ss_dssp             SEEEECCSSCSS--SGGGSCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEEGGGGCSCSSS-SBCTTSCCCCCS
T ss_pred             CEEEECCCCCCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeCcHHHhCCCCCC-CCCCCCCCCCCC
Confidence            999999995432  245667888999999999999998743    2 45799999998877542111 111223445567


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHHHHh---------------ccCCCHHHHHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNERFA---------------GNLRTSEEGADT  285 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~---------------~~~~~~~e~A~~  285 (339)
                      .|+.||++.+.+++.++.++   |++++.++||.+.+|...... ........               ..+..++|+|++
T Consensus       136 ~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  212 (312)
T 3ko8_A          136 VYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEA  212 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHH
Confidence            89999999999999999887   899999999999998754321 11111111               123459999999


Q ss_pred             HHHHhccCC-CCCCCcceeeCCCC
Q 019551          286 VLWLALQPK-EKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~-~~~~~G~~~~d~~~  308 (339)
                      +++++..+. ....++.|.+.+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~ni~~~~  236 (312)
T 3ko8_A          213 TLAAWKKFEEMDAPFLALNVGNVD  236 (312)
T ss_dssp             HHHHHHHHHHSCCSEEEEEESCSS
T ss_pred             HHHHHHhccccCCCCcEEEEcCCC
Confidence            999987522 12345566665543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=1.5e-21  Score=182.86  Aligned_cols=229  Identities=15%  Similarity=0.139  Sum_probs=159.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCc-cEEEEeccCCCHHHHHHHHHHHh
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-----GETALSAIRSKTGNE-NVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      |++|||||+|+||.+++++|+++|++|++++|+.++     ++....++...  +. ++.++.+|++|.+++.++++.. 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22211111110  12 6888999999999999988865 


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          ++|+||||||.....  .+.++++..+++|+.++..+++++.+...++++.+++|++||.+.+.....  ...+..
T Consensus       106 ----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~--~~~E~~  177 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP--PQSETT  177 (381)
T ss_dssp             ----CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS--SBCTTS
T ss_pred             ----CCCEEEECCcccCcc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC--CCCCCC
Confidence                689999999975421  234668889999999999999999998765434579999999887653211  111112


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-----chhHHHHH---------------hcc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-----MPSFNERF---------------AGN  275 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-----~~~~~~~~---------------~~~  275 (339)
                      +..+...|+.+|++.+.+++.++.++   |+.+..+.|..+..|.....     ........               ...
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  254 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  254 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceee
Confidence            34456789999999999999998876   45544444444433322111     01111100               113


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +..++|+|+++++++..+.    ++.|.+.+++
T Consensus       255 ~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~  283 (381)
T 1n7h_A          255 WGFAGDYVEAMWLMLQQEK----PDDYVVATEE  283 (381)
T ss_dssp             CEEHHHHHHHHHHHHTSSS----CCEEEECCSC
T ss_pred             eEEHHHHHHHHHHHHhCCC----CCeEEeeCCC
Confidence            5569999999999987543    3677776553

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=3.8e-22  Score=184.05  Aligned_cols=228  Identities=15%  Similarity=0.142  Sum_probs=157.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRG-------ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G-------~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      ++++++|||||+|+||++++++|+++|       ++|++++|+.++...       . ...++.++.+|++|.+++++++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~-~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G-FSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T-CCSEEEEEECCTTSTTHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c-cCCceeEEEcCCCCHHHHHHHH
Confidence            678999999999999999999999999       899999998653221       1 1346888999999999998877


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE  211 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~  211 (339)
                      +      +++|+||||||....   .+.++++..+++|+.++..+++++.+...+.+..++||++||.+.+...... ..
T Consensus        84 ~------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~-~~  153 (342)
T 2hrz_A           84 E------ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY-PI  153 (342)
T ss_dssp             H------TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS-SB
T ss_pred             h------cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC-Cc
Confidence            5      379999999997642   2346788899999999999999987754332125799999999876532111 11


Q ss_pred             ccCCCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEee--CCcccCCCccCcchhHHHHH-h-------------
Q 019551          212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMH--PGWAETPGVAKSMPSFNERF-A-------------  273 (339)
Q Consensus       212 ~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~--PG~v~T~~~~~~~~~~~~~~-~-------------  273 (339)
                      .+..+..+...|+.||++.+.+++.++.+..  ...+|++.|.  ||.+.++.. .......... .             
T Consensus       154 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          154 PDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS-GFFSNILREPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG-GHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH-HHHHHHHHHHhcCCCeeccCCCccc
Confidence            1112233567899999999999998877531  2236666666  777655421 1111111111 0             


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCC-CCCcceeeC
Q 019551          274 GNLRTSEEGADTVLWLALQPKEK-LVSGSFYFD  305 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~-~~~G~~~~d  305 (339)
                      ..+..++|+|+.++.++..+... ..++.|.+.
T Consensus       233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             eeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            11357999999999998643211 123455553

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=6.4e-22  Score=188.29  Aligned_cols=223  Identities=14%  Similarity=0.115  Sum_probs=155.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch---hHHHHHHHHHhhcC-------CccEEEEeccCCCHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE---KGETALSAIRSKTG-------NENVHLELCDLSSITEIK  128 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~---~~~~~~~~l~~~~~-------~~~~~~~~~Dl~~~~~v~  128 (339)
                      ..+|+||||||+|+||++++++|++.|++|++++|+++   ..+...+.+...++       ..++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45789999999999999999999999999999999987   33333343332211       247899999999988776


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC-
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT-  207 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~-  207 (339)
                              ..+++|+||||||...     ..+.++..+++|+.++..+++++.+      ...++|++||... +.... 
T Consensus       147 --------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~SS~~~-G~~~~~  206 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV-GTYFDI  206 (427)
T ss_dssp             --------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH------TTCEEEEEEEGGG-GSEECS
T ss_pred             --------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEECchHh-CCCccC
Confidence                    4568999999999764     2356788899999999999998865      3579999999877 22110 


Q ss_pred             --ccccccC-C---CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---------chhHHHHH
Q 019551          208 --DDLEFNS-G---SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---------MPSFNERF  272 (339)
Q Consensus       208 --~~~~~~~-~---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---------~~~~~~~~  272 (339)
                        .+.++.. .   +......|+.||++.+.+++.++.    .|++++.++||.|.++.....         ........
T Consensus       207 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~  282 (427)
T 4f6c_A          207 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  282 (427)
T ss_dssp             SCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHH
T ss_pred             CCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHH
Confidence              0111111 1   123567899999999999988653    689999999999998865432         11222211


Q ss_pred             h-------------ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          273 A-------------GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       273 ~-------------~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .             ..+...+|+|+++++++..+.   .++.|.+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~  328 (427)
T 4f6c_A          283 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPN  328 (427)
T ss_dssp             HHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSC
T ss_pred             HhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCC
Confidence            1             125668999999999987543   56677776654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.88  E-value=9.5e-22  Score=184.24  Aligned_cols=221  Identities=16%  Similarity=0.112  Sum_probs=159.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++++|||||+|+||++++++|+++|++|++++|+.++....      .  ..++.++.+|++|.+++.++++       
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~-------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE-------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC-------
Confidence            568999999999999999999999999999999987542210      0  1257888999999999888774       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc--c-ccc-cCC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD--D-LEF-NSG  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~--~-~~~-~~~  215 (339)
                      .+|+||||||...... .+.++++..+++|+.++..+++++..    . +.+++|++||.+.+......  + ... +..
T Consensus        93 ~~d~Vih~A~~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~  166 (379)
T 2c5a_A           93 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARI----N-GIKRFFYASSACIYPEFKQLETTNVSLKESD  166 (379)
T ss_dssp             TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             CCCEEEECceecCccc-ccccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEeehheeCCCCCCCccCCCcCccc
Confidence            6999999999754211 11456788899999999999998743    2 45799999998776432110  0 000 000


Q ss_pred             --CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHH-h-------------
Q 019551          216 --SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERF-A-------------  273 (339)
Q Consensus       216 --~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~-~-------------  273 (339)
                        +..+...|+.+|++.+.+++.++.++   |++++.++||.+.+|.....      .+...... .             
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (379)
T 2c5a_A          167 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  243 (379)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe
Confidence              23345689999999999999998775   79999999999999864321      12222111 1             


Q ss_pred             -ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 -GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 -~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       ..+..++|+|+++++++..+    .++.|.+.+++
T Consensus       244 ~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~  275 (379)
T 2c5a_A          244 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE  275 (379)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCC
T ss_pred             eEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCC
Confidence             12345999999999998753    35677776553

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=2.2e-22  Score=174.89  Aligned_cols=212  Identities=19%  Similarity=0.145  Sum_probs=152.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..         ...+.++.+|++|.+++.++++       .+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999998753211         1478999999999999988876       58


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||.....        ...+++|+.++..+++++..    . +.+++|++||.+.+......  .....+..+..
T Consensus        69 d~vi~~a~~~~~~--------~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~~~~~~~~~--~~~~~~~~p~~  133 (227)
T 3dhn_A           69 DAVISAFNPGWNN--------PDIYDETIKVYLTIIDGVKK----A-GVNRFLMVGGAGSLFIAPGL--RLMDSGEVPEN  133 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHH----T-TCSEEEEECCSTTSEEETTE--EGGGTTCSCGG
T ss_pred             CEEEEeCcCCCCC--------hhHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCChhhccCCCCC--ccccCCcchHH
Confidence            9999999865211        12688999999888887643    3 45699999998766432111  11122334567


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH------HHhccCCCHHHHHHHHHHHhccCCC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE------RFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      .|+.+|++.+.+.+.++.   ..|++++.++||++.+|......-....      .....+..++|+|+++++++..+. 
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-  209 (227)
T 3dhn_A          134 ILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK-  209 (227)
T ss_dssp             GHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc-
Confidence            899999999998888765   4689999999999988754321100000      001235679999999999997553 


Q ss_pred             CCCCcceeeCCCCC
Q 019551          296 KLVSGSFYFDRAEA  309 (339)
Q Consensus       296 ~~~~G~~~~d~~~~  309 (339)
                       ..+..|.+.+.+.
T Consensus       210 -~~g~~~~~~~~~~  222 (227)
T 3dhn_A          210 -HHQERFTIGYLEH  222 (227)
T ss_dssp             -CCSEEEEEECCSC
T ss_pred             -ccCcEEEEEeehh
Confidence             4566776654443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.88  E-value=1.4e-21  Score=179.91  Aligned_cols=223  Identities=15%  Similarity=0.127  Sum_probs=158.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC---C---CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASR---G---ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~---G---~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++|||||+|+||++++++|+++   |   ++|++++|+.....  .+.+.......++.++.+|++|.+++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcccCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6899999999999999999997   8   99999998642100  001111111346889999999999888776     


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                        .++|+||||||....  ..+.++++..+++|+.++..+++++.+.     +.++||++||.+.+..... ....+..+
T Consensus        75 --~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~~~-~~~~E~~~  144 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSIDS-GSWTESSP  144 (337)
T ss_dssp             --TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCSS-SCBCTTSC
T ss_pred             --cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCCCC-CCCCCCCC
Confidence              379999999997542  1234567788999999999999988654     3479999999877643211 11111123


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh--------------ccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA--------------GNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~--------------~~~~~~~  280 (339)
                      ..+...|+.||++.+.+++.++.++   |++++.++||.+.+|....  ..+.......              ..+..++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (337)
T 1r6d_A          145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (337)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHH
Confidence            4456789999999999999998875   7999999999999987532  1122211111              1244689


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+++++++..+.   .++.|.+.+++
T Consensus       222 Dva~a~~~~~~~~~---~g~~~~v~~~~  246 (337)
T 1r6d_A          222 DHCRGIALVLAGGR---AGEIYHIGGGL  246 (337)
T ss_dssp             HHHHHHHHHHHHCC---TTCEEEECCCC
T ss_pred             HHHHHHHHHHhCCC---CCCEEEeCCCC
Confidence            99999999986432   35567776654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.88  E-value=2.2e-21  Score=176.80  Aligned_cols=216  Identities=19%  Similarity=0.162  Sum_probs=154.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||+|+||++++++|+++|..|++..|+....+.         -...+.++.+|+++ +++.++++       .+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF---------VNEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG---------SCTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh---------cCCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            579999999999999999999999555555554432211         12468899999999 88877765       79


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |++||+||...  ...+.++++..+++|+.++..+++++..    . +.+++|++||.+.+...... ...+..+..+..
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~iv~~SS~~vyg~~~~~-~~~E~~~~~~~~  136 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRK----A-GVSRIVFTSTSTVYGEAKVI-PTPEDYPTHPIS  136 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEECCGGGGCSCSSS-SBCTTSCCCCCS
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCchHHhCcCCCC-CCCCCCCCCCCC
Confidence            99999999543  2245677889999999999999987543    3 46799999998877532111 111123445567


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHHHh---------------ccCCCHHHHHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNERFA---------------GNLRTSEEGADT  285 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~---------------~~~~~~~e~A~~  285 (339)
                      .|+.+|++.+.+++.++.++   |++++.++|+.+.+|..... .+.......               ..+..++|+|++
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  213 (313)
T 3ehe_A          137 LYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDA  213 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHH
Confidence            89999999999999999875   89999999999999864422 111111110               124568999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++++..   ...++.|.+.+++
T Consensus       214 ~~~~~~~---~~~~~~~ni~~~~  233 (313)
T 3ehe_A          214 MLFGLRG---DERVNIFNIGSED  233 (313)
T ss_dssp             HHHHTTC---CSSEEEEECCCSC
T ss_pred             HHHHhcc---CCCCceEEECCCC
Confidence            9999862   2235666665543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.88  E-value=1.3e-21  Score=182.64  Aligned_cols=223  Identities=12%  Similarity=0.144  Sum_probs=160.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC-CHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS-SITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~  135 (339)
                      .+++++||||||+|+||.+++++|+++ |++|++++|+.++.....       ...++.++.+|++ |.+.+.++++   
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-------KHERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-------GSTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-------cCCCeEEEeCccCCCHHHHHHHhc---
Confidence            367899999999999999999999998 999999999986543221       1247899999999 9999988887   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          .+|+|||+||......  ..++.+..+++|+.++..+++++..    . + .++|++||.+.+.............
T Consensus        91 ----~~d~Vih~A~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~----~-~-~~~v~~SS~~vyg~~~~~~~~e~~~  158 (372)
T 3slg_A           91 ----KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVK----Y-G-KHLVFPSTSEVYGMCADEQFDPDAS  158 (372)
T ss_dssp             ----HCSEEEECBCCCCHHH--HHHCHHHHHHHHTTTTHHHHHHHHH----H-T-CEEEEECCGGGGBSCCCSSBCTTTC
T ss_pred             ----cCCEEEEcCccccHHH--HhhCHHHHHHHHHHHHHHHHHHHHH----h-C-CcEEEeCcHHHhCCCCCCCCCcccc
Confidence                5899999999764321  2345667889999999988887643    3 3 7999999987765421111100000


Q ss_pred             -----C-CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhHHHHHh------
Q 019551          216 -----S-FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSFNERFA------  273 (339)
Q Consensus       216 -----~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~~------  273 (339)
                           + ..+...|+.+|.+.+.+++.++.+    |++++.++|+.+.+|....          ..+.......      
T Consensus       159 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (372)
T 3slg_A          159 ALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENIS  234 (372)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEE
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcE
Confidence                 1 134568999999999999888754    8999999999999886432          1111111110      


Q ss_pred             --------ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          274 --------GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       274 --------~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                              ..+...+|+|+++++++..+.....++.|.+.+
T Consensus       235 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          235 LVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             EGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             EeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence                    134578999999999997654334566777755

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=2e-21  Score=177.22  Aligned_cols=210  Identities=13%  Similarity=0.093  Sum_probs=121.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.            +  +  ++.+|++|.+++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh-----C
Confidence            6899999999999999999999999999999987543            1  1  5678999999999888765     6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+||||||.....  .+.++++..+++|+.++..+++++.+.     + +++|++||.+.+...  .....+..+..+.
T Consensus        61 ~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~v~~~~--~~~~~E~~~~~~~  130 (315)
T 2ydy_A           61 PHVIVHCAAERRPD--VVENQPDAASQLNVDASGNLAKEAAAV-----G-AFLIYISSDYVFDGT--NPPYREEDIPAPL  130 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH-----T-CEEEEEEEGGGSCSS--SCSBCTTSCCCCC
T ss_pred             CCEEEECCcccChh--hhhcCHHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEEchHHHcCCC--CCCCCCCCCCCCc
Confidence            99999999976532  245678889999999999999988653     2 599999998876541  1111111223446


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc---CcchhHHHHH-------------hccCCCHHHHHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA---KSMPSFNERF-------------AGNLRTSEEGAD  284 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~---~~~~~~~~~~-------------~~~~~~~~e~A~  284 (339)
                      ..|+.+|++.+.+++.++.+       +..++|+.+..+...   ...+......             ...+..++|+|+
T Consensus       131 ~~Y~~sK~~~e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  203 (315)
T 2ydy_A          131 NLYGKTKLDGEKAVLENNLG-------AAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVAT  203 (315)
T ss_dssp             SHHHHHHHHHHHHHHHHCTT-------CEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCC-------eEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHH
Confidence            78999999999999887432       244555555443221   1111111111             123557999999


Q ss_pred             HHHHHhccCC-CCCCCcceeeCCCC
Q 019551          285 TVLWLALQPK-EKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~-~~~~~G~~~~d~~~  308 (339)
                      ++++++..+. ....++.|.+.+++
T Consensus       204 a~~~~~~~~~~~~~~~~~~~i~~~~  228 (315)
T 2ydy_A          204 VCRQLAEKRMLDPSIKGTFHWSGNE  228 (315)
T ss_dssp             HHHHHHHHHHTCTTCCEEEECCCSC
T ss_pred             HHHHHHHhhccccCCCCeEEEcCCC
Confidence            9999986431 12346677776654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.88  E-value=1.1e-21  Score=183.57  Aligned_cols=224  Identities=14%  Similarity=0.134  Sum_probs=155.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.+...+   .+.   ...++.++.+|++|.+++.++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHHHHHHhh----
Confidence            3678999999999999999999999999 999999998653211   111   13468899999999988776554    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc--cC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF--NS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~--~~  214 (339)
                         .+|+||||||.....  .+.++++..+++|+.++..+++++.    +..+.+++|++||.+.+......+ ..  +.
T Consensus        99 ---~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~-~~~~E~  168 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ--SSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDD-AKATEE  168 (377)
T ss_dssp             ---CCSEEEECCCCSCHH--HHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC---------------CC
T ss_pred             ---CCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCC-cCcccc
Confidence               799999999975321  2345678889999999999998762    211346999999987664321100 00  11


Q ss_pred             C---CC-cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc---------c------CcchhHHHHHh-c
Q 019551          215 G---SF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV---------A------KSMPSFNERFA-G  274 (339)
Q Consensus       215 ~---~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~---------~------~~~~~~~~~~~-~  274 (339)
                      .   +. .+...|+.+|++.+.+++.++.++   |++++.++||.+.++..         .      ...+....... +
T Consensus       169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g  245 (377)
T 2q1s_A          169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKG  245 (377)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTT
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcC
Confidence            1   22 345689999999999999998875   89999999999999865         2      11222222111 1


Q ss_pred             -------------cCCCHHHHHHH-HHHHhccCCCCCCCcceeeCCCC
Q 019551          275 -------------NLRTSEEGADT-VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       275 -------------~~~~~~e~A~~-v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                                   .+..++|+|++ +++++..+.    .|.|.+.+++
T Consensus       246 ~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~----~g~~~i~~~~  289 (377)
T 2q1s_A          246 MPLPLENGGVATRDFIFVEDVANGLIACAADGTP----GGVYNIASGK  289 (377)
T ss_dssp             CCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT----TEEEECCCCC
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC----CCeEEecCCC
Confidence                         23348999999 999987532    4566666543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=9.8e-21  Score=176.48  Aligned_cols=230  Identities=17%  Similarity=0.152  Sum_probs=154.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE-TALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... +..+++....  .+.++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999865421 1122221110  1246888999999999999998865   


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+  +.++||++||.+.+...... ...+..+.
T Consensus        78 --~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~v~g~~~~~-~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELYGLVQEI-PQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGGTTCCSS-SBCTTSCC
T ss_pred             --CCCEEEECCcccCcc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChhhhCCCCCC-CCCccCCC
Confidence              689999999975432  345667888999999999999998765322  23799999998776532110 11111233


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHHHH-h--------------ccCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNERF-A--------------GNLR  277 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~-~--------------~~~~  277 (339)
                      .+...|+.||++.+.+++.++.++   |+.+..+.|..+..|......     ....... .              ..+.
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  227 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeee
Confidence            446789999999999999999876   567767777666555432211     1111110 0              1245


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ..+|+|++++.++..+.    ++.|.+.++
T Consensus       228 ~v~Dva~a~~~~~~~~~----~~~~ni~~~  253 (372)
T 1db3_A          228 HAKDYVKMQWMMLQQEQ----PEDFVIATG  253 (372)
T ss_dssp             EHHHHHHHHHHTTSSSS----CCCEEECCC
T ss_pred             EHHHHHHHHHHHHhcCC----CceEEEcCC
Confidence            68999999999886432    366666443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.88  E-value=4.1e-21  Score=176.12  Aligned_cols=175  Identities=15%  Similarity=0.126  Sum_probs=134.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +++|||||+|+||++++++|+++|++|++++|+.....   +.    .. .++.++.+|++|.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~----~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA----IT-EGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG----SC-TTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh----cC-CCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            57999999999999999999999999999999764321   11    11 2578899999999999888875     379


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||.....  .+.++++..+++|+.++..+++++..    . +.+++|++||.+.+...... ...+..+..+..
T Consensus        69 d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~~~~~~~~~-~~~E~~~~~~~~  140 (330)
T 2c20_A           69 EAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDE----F-KVDKFIFSSTAATYGEVDVD-LITEETMTNPTN  140 (330)
T ss_dssp             EEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGGCSCSSS-SBCTTSCCCCSS
T ss_pred             CEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHH----c-CCCEEEEeCCceeeCCCCCC-CCCcCCCCCCCC
Confidence            9999999975421  13456788999999999999987632    2 45799999998776432111 111112334567


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      .|+.+|++.+.+++.++.++   |++++.++||.+.++.
T Consensus       141 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          141 TYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            89999999999999988764   8999999999998874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=9.5e-21  Score=174.05  Aligned_cols=225  Identities=14%  Similarity=0.101  Sum_probs=159.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE-TALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++++|||||+|+||++++++|+++|++|++++|+.++.. ...+.+.   ...++.++.+|++|.+++.++++..    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            4789999999999999999999999999999999875421 1111111   1246889999999999999988865    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCccccccccCccccccCCCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                       ++|+||||||.....  .+.++++..+++|+.++..+++++.+.     + .+++|++||.+.+......+ ..+..+.
T Consensus        86 -~~d~Vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~SS~~v~g~~~~~~-~~E~~~~  156 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQF-----SPETRFYQASTSEMFGLIQAER-QDENTPF  156 (335)
T ss_dssp             -CCSEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTSEEEEEEEGGGGCSCSSSS-BCTTSCC
T ss_pred             -CCCEEEECccccchh--hhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEEeCHHHhCCCCCCC-CCcccCC
Confidence             689999999965321  123567788999999999999987543     3 37999999987765421111 1111223


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHHHH-h--------------ccCC
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNERF-A--------------GNLR  277 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~-~--------------~~~~  277 (339)
                      .+...|+.+|++.+.+++.++.++   |+++..+.|+.+..|......     ....... .              ..+.
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence            345689999999999999998775   688888999988877543221     1111111 1              1234


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ..+|+|++++.++..+.    ++.|.+.++
T Consensus       234 ~v~Dva~a~~~~~~~~~----~~~~ni~~~  259 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQDK----ADDYVVATG  259 (335)
T ss_dssp             EHHHHHHHHHHHHHSSS----CCCEEECCS
T ss_pred             EHHHHHHHHHHHHhcCC----CCEEEEeCC
Confidence            57999999999987543    366766544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=1.6e-21  Score=181.12  Aligned_cols=222  Identities=13%  Similarity=0.082  Sum_probs=155.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++++++|||||+|+||++++++|+++| ++|++++|+.+...  .+.+    .  .+. +.+|++|.+.++++++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~--~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----V--DLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----T--TSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----c--Cce-EeeecCcHHHHHHHHhh--c
Confidence            3567899999999999999999999999 89999999865421  0111    1  122 67899999888877653  2


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      .++++|+||||||....    +.++++..+++|+.++..+++++.+.     +. ++|++||.+.+....... ..+..+
T Consensus       112 ~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~v~g~~~~~~-~~E~~~  180 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRTSDF-IESREY  180 (357)
T ss_dssp             CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGCSCSSCC-CSSGGG
T ss_pred             ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchHHhCCCCCCC-cCCcCC
Confidence            35689999999997653    34567889999999999999988652     34 999999988764321100 001112


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------cchhHHHHH---------------hcc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SMPSFNERF---------------AGN  275 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------~~~~~~~~~---------------~~~  275 (339)
                      ..+...|+.+|++.+.+++.++.+   .|++++.++||.+.+|....      ..+......               ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence            223568999999999999998765   48999999999999886431      111111111               113


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +..++|+|+++++++..+.    ++.|.+.+++
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~  286 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGR  286 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCC
Confidence            4578999999999987543    6677776553

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.87  E-value=6.2e-21  Score=175.84  Aligned_cols=221  Identities=13%  Similarity=0.103  Sum_probs=155.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH-HHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI-TEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~  139 (339)
                      +++|||||+|+||++++++|+++ |++|++++|+.++.+..       ....++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh-------hcCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 89999999987654321       1124688999999984 56776665       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC-----
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS-----  214 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~-----  214 (339)
                      .+|+||||||...+.  ...++++..+++|+.++..+++++..    . + +++|++||.+.+............     
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHH----h-C-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            589999999975421  12345677899999999998887643    3 3 799999998776432111100000     


Q ss_pred             CC-CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhHHHHH-h---------
Q 019551          215 GS-FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSFNERF-A---------  273 (339)
Q Consensus       215 ~~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~-~---------  273 (339)
                      .+ ..+...|+.+|++.+.+++.++.+.   |++++.++||.+.+|....          ..+...... .         
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence            01 1244589999999999999998775   7999999999999886431          111111111 0         


Q ss_pred             ----ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          274 ----GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       274 ----~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                          ..+..++|+|+++++++..+.....++.|.+.++
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCC
Confidence                1255799999999999875432234556666655

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.87  E-value=9.1e-21  Score=174.49  Aligned_cols=181  Identities=15%  Similarity=0.105  Sum_probs=130.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|+||++++++|+++|++|++++|......+..+++.+.. +.++.++.+|++|.+++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            68999999999999999999999999999875322111222232221 235778899999999998888752     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC-cchH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF-DGME  221 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~-~~~~  221 (339)
                      +||||||......  ..+..+..+++|+.++..+++++.    +. +.++||++||.+.+....... ..+..+. ++..
T Consensus        76 ~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~iv~~SS~~~~g~~~~~~-~~e~~~~~~~~~  147 (338)
T 1udb_A           76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMR----AA-NVKNFIFSSSATVYGDNPKIP-YVESFPTGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHH----HH-TCCEEEEEEEGGGGCSCCSSS-BCTTSCCCCCSS
T ss_pred             EEEECCccCcccc--chhcHHHHHHHHHHHHHHHHHHHH----hc-CCCeEEEEccHHHhCCCCCCC-cCcccCCCCCCC
Confidence            9999999753211  234566789999999999988643    33 457999999987764321110 0011111 3367


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      .|+.||++.+.+++.++.+.  .|+++..++|+.+..+
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            89999999999999998874  4799999998777654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=5.3e-22  Score=221.09  Aligned_cols=176  Identities=22%  Similarity=0.172  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhH---HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKG---ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+.++.   .+..+++...  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999996 88999986544   3344444433  4578899999999999999999987


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      + ++++|+||||||+......  .+.++|++++++|+.|++++.+.+.+.|.+   .++||++||.++..          
T Consensus      1961 ~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~---------- 2026 (2512)
T 2vz8_A         1961 Q-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGR---------- 2026 (2512)
T ss_dssp             H-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHT----------
T ss_pred             h-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcC----------
Confidence            4 7899999999998765433  688999999999999999999999998754   38999999998873          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCccc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAE  257 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~  257 (339)
                        +.++...|+++|+++.+|++..+.+    |+...++..|.+.
T Consensus      2027 --g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2027 --GNAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             --TCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence              4678899999999999999987654    7777788777664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=2.5e-20  Score=169.66  Aligned_cols=211  Identities=16%  Similarity=0.160  Sum_probs=154.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++++|||||+|+||++++++|+++|++|++++|+++..+  .+         ++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN---------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC---------ceEEEEcccc-HHHHHHhhc-------C
Confidence            478999999999999999999999999999999954322  11         5788999999 888877765       7


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+|||+||.....      ..+..+++|+.++..+++++..    . +..++|++||.+.+......+ ..+..+..+.
T Consensus        63 ~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~----~-~~~r~v~~SS~~vyg~~~~~~-~~E~~~~~p~  130 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYE----N-NISNIVYASTISAYSDETSLP-WNEKELPLPD  130 (311)
T ss_dssp             CSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGCCCGGGCS-BCTTSCCCCS
T ss_pred             CCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEccHHHhCCCCCCC-CCCCCCCCCC
Confidence            99999999986543      5667889999999998887743    2 457899999987764321111 1111233446


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh--------------ccCCCHHHHHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA--------------GNLRTSEEGAD  284 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~--------------~~~~~~~e~A~  284 (339)
                      ..|+.+|.+.+.+++.++.+   .|++++.++||.+.+|....  ..+.......              ..+...+|+|+
T Consensus       131 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~  207 (311)
T 3m2p_A          131 LMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK  207 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHH
Confidence            78999999999999998875   58999999999999986542  2222222211              12446889999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.++..+.   .++.|.+.+++
T Consensus       208 a~~~~~~~~~---~~~~~~i~~~~  228 (311)
T 3m2p_A          208 SVIYALKQEK---VSGTFNIGSGD  228 (311)
T ss_dssp             HHHHHTTCTT---CCEEEEECCSC
T ss_pred             HHHHHHhcCC---CCCeEEeCCCC
Confidence            9999987543   46677675543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=1.7e-20  Score=175.22  Aligned_cols=228  Identities=14%  Similarity=0.101  Sum_probs=158.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-----GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+++... ...++.++.+|++|.+++.++++..  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999998653     11111111000 1236888999999999999988865  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+  +.++||++||.+.+...... ...+..+
T Consensus       102 ---~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS~~~~~~~~~~-~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEI-PQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSS-SBCTTSC
T ss_pred             ---CCCEEEECCCccccc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecchhhhCCCCCC-CCCccCC
Confidence               689999999975321  234667889999999999999998765321  23799999998877532111 1111123


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHHHH-h--------------ccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNERF-A--------------GNL  276 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~-~--------------~~~  276 (339)
                      ..+...|+.+|++.+.+++.++.++   |+.+..+.|+.+..|......     ....... .              ..+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence            3345789999999999999998875   688888888877766432211     1111110 0              124


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ..++|+|++++.++..+.    ++.|.+.++
T Consensus       251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~  277 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE----PEDFVIATG  277 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCS
T ss_pred             EEHHHHHHHHHHHHhcCC----CceEEEeCC
Confidence            469999999999986432    366766444

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=2.7e-20  Score=171.77  Aligned_cols=224  Identities=15%  Similarity=0.096  Sum_probs=152.0

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +...++++++|||||+|+||++++++|+++|++|++++|+........+.+   ....++.++.+|+.+..         
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~---------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL---------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC---------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh---------
Confidence            334577899999999999999999999999999999999754321111111   12346889999998752         


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccc---
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE---  211 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~---  211 (339)
                         +..+|+||||||......  ..++++..+++|+.++..+++++...     + .++|++||.+.+......+..   
T Consensus        89 ---~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~v~g~~~~~~~~E~~  157 (343)
T 2b69_A           89 ---YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV-----G-ARLLLASTSEVYGDPEVHPQSEDY  157 (343)
T ss_dssp             ---CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH-----T-CEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             ---hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEECcHHHhCCCCCCCCcccc
Confidence               357999999999754211  12346678999999999999987542     2 489999998776432110000   


Q ss_pred             -ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----cchhHHHHH-h------------
Q 019551          212 -FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----SMPSFNERF-A------------  273 (339)
Q Consensus       212 -~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----~~~~~~~~~-~------------  273 (339)
                       ....+..+...|+.+|++.+.+++.++.+.   |++++.++||.+.+|....    ..+...... .            
T Consensus       158 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (343)
T 2b69_A          158 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ  234 (343)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCC
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCe
Confidence             000234456789999999999999988765   8999999999999986432    111111111 1            


Q ss_pred             -ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 -GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 -~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       ..+..++|+|+++++++..+    .++.|.+.+++
T Consensus       235 ~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~  266 (343)
T 2b69_A          235 TRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPE  266 (343)
T ss_dssp             EEECEEHHHHHHHHHHHHTSS----CCSCEEESCCC
T ss_pred             EEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCC
Confidence             12447899999999998643    25667775543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.86  E-value=6.8e-21  Score=165.02  Aligned_cols=204  Identities=15%  Similarity=0.084  Sum_probs=137.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||||+||++++++|+++|++|++++|+++++.+..        ...+.++.+|++|.++  +.+       ..+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~~-------~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--ADL-------DSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HHH-------TTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hhc-------ccCC
Confidence            5999999999999999999999999999999987654321        2368899999999887  222       3789


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc-ccccCCCC-cch
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD-LEFNSGSF-DGM  220 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~-~~~~~~~~-~~~  220 (339)
                      +||||||.....         ....+|+.++..+++    .+++. + +++|++||.++........ ........ ...
T Consensus        65 ~vi~~ag~~~~~---------~~~~~n~~~~~~l~~----a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           65 AVVDALSVPWGS---------GRGYLHLDFATHLVS----LLRNS-D-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEEECCCCCTTS---------SCTHHHHHHHHHHHH----TCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEEECCccCCCc---------chhhHHHHHHHHHHH----HHHHc-C-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999986211         124567777655554    44444 4 8999999987654321111 01111111 125


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-----HHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-----ERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      ..|+.+|++.+.+    .......|++++.|+||++.++..........     ......+..++|+|+++++++..+. 
T Consensus       130 ~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-  204 (224)
T 3h2s_A          130 PWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT-  204 (224)
T ss_dssp             TTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-
T ss_pred             hhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCcc-
Confidence            6799999988854    22234679999999999999873322110000     0011346789999999999997643 


Q ss_pred             CCCCcceee
Q 019551          296 KLVSGSFYF  304 (339)
Q Consensus       296 ~~~~G~~~~  304 (339)
                       ..+..|.+
T Consensus       205 -~~g~~~~~  212 (224)
T 3h2s_A          205 -AIRDRIVV  212 (224)
T ss_dssp             -CTTSEEEE
T ss_pred             -ccCCEEEE
Confidence             34555655

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=7.5e-21  Score=172.91  Aligned_cols=219  Identities=12%  Similarity=0.146  Sum_probs=156.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++|||||+|+||++++++|+++  |++|++++|+.++.+     +.     .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            478999999999999999999999  899999999876521     11     13567889999999999888754    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       ++|+||||||.....   ..++++..+++|+.++..+++++.+    . +.+++|++||.+.+..........+..+..
T Consensus        68 -~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 -KITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKA----K-KIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             -TCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHT----T-SCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             -CCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence             699999999975421   2356778899999999999988743    2 457999999988775421111111112233


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------chhHHHHHh-------------ccCCC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------MPSFNERFA-------------GNLRT  278 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------~~~~~~~~~-------------~~~~~  278 (339)
                      +...|+.+|++.+.+++.++.++   |++++.++||.+.++.....       .+.......             ..+..
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            46689999999999999988775   79999999999988642111       111111111             11345


Q ss_pred             HHHHHHHHHHHhccCCCCCC-CcceeeC
Q 019551          279 SEEGADTVLWLALQPKEKLV-SGSFYFD  305 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~-~G~~~~d  305 (339)
                      .+|+|++++.++..+..... ++.|.+.
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~  243 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLA  243 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECC
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeC
Confidence            79999999999875433222 2556554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=1.8e-21  Score=179.17  Aligned_cols=222  Identities=15%  Similarity=0.166  Sum_probs=147.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH--HHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA--LSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|++|||||+|+||++++++|+++|++|+++.|+.++..+.  ..++. .  ..++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999999986543211  12222 1  2368889999999988887765      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccc-c------Ccccc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAH-L------TDDLE  211 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~-~------~~~~~  211 (339)
                       .+|+|||+||....   ...+..++.+++|+.|+..+++++.+..    +.++||++||.++.... .      ..+..
T Consensus        80 -~~D~Vih~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF---ASEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             -TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             -CCCEEEEeCCccCC---CCCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence             58999999986521   1112234589999999999999876531    25799999998743211 0      00000


Q ss_pred             ccCC----CC-cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-----------HHHh--
Q 019551          212 FNSG----SF-DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-----------ERFA--  273 (339)
Q Consensus       212 ~~~~----~~-~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-----------~~~~--  273 (339)
                      ....    +. +....|+.||++.+.+++.++.+   .|+++++++||.|.+|......+...           ....  
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  228 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGM  228 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccc
Confidence            0000    00 01125999999988888777654   38999999999999987543221110           0000  


Q ss_pred             -------c--cCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          274 -------G--NLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       274 -------~--~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                             +  .+..++|+|+++++++..+.   .+|.|++.
T Consensus       229 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~  266 (338)
T 2rh8_A          229 KGMQMLSGSVSIAHVEDVCRAHIFVAEKES---ASGRYICC  266 (338)
T ss_dssp             HHHHHHHSSEEEEEHHHHHHHHHHHHHCTT---CCEEEEEC
T ss_pred             cccccccCcccEEEHHHHHHHHHHHHcCCC---cCCcEEEe
Confidence                   0  36789999999999986432   24566553

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=1.7e-22  Score=173.94  Aligned_cols=193  Identities=13%  Similarity=0.067  Sum_probs=144.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++          .  ..++.++.+|++|.+++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            468999999999999999999999998  99999998764          0  236788889998876654432      


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                         +|+||||||....    +.+.++..+++|+.++..+++++.+    . +.+++|++||.+.+.              
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~~~~--------------  119 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALGADA--------------  119 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCT--------------
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHH----c-CCCEEEEECCcccCC--------------
Confidence               8999999997542    2456788899999999999988643    2 457899999987762              


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeE-EEEeeCCcccCCCccCcc-hhHH----HHH--hccCCCHHHHHHHHHHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIG-FYSMHPGWAETPGVAKSM-PSFN----ERF--AGNLRTSEEGADTVLWL  289 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~-v~~v~PG~v~T~~~~~~~-~~~~----~~~--~~~~~~~~e~A~~v~~l  289 (339)
                      ++...|+.+|++.+.+++.       .|++ ++.++||++.++...... +...    ...  ...+..++|+|+.++++
T Consensus       120 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  192 (215)
T 2a35_A          120 KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRL  192 (215)
T ss_dssp             TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHH
Confidence            1235799999999988764       3898 999999999988543111 1100    000  11245689999999999


Q ss_pred             hccCCCCCCCcceeeCCC
Q 019551          290 ALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~  307 (339)
                      +..+.    +|.|.+.++
T Consensus       193 ~~~~~----~~~~~i~~~  206 (215)
T 2a35_A          193 ALEEG----KGVRFVESD  206 (215)
T ss_dssp             HTCCC----SEEEEEEHH
T ss_pred             HhcCC----CCceEEcHH
Confidence            97543    566666544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.85  E-value=2.3e-20  Score=168.26  Aligned_cols=200  Identities=15%  Similarity=0.211  Sum_probs=146.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ..+++|||||+|+||++++++|+++|++|++++|+                       .+|++|.+++.++++..     
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----
Confidence            35789999999999999999999999999999996                       27999999999888765     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+||||||....  ..+.++++..+++|+.++..+++++.+.     + .++|++||.+.+......+ ..+..+..+
T Consensus        63 ~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~-~~iv~~SS~~v~~~~~~~~-~~E~~~~~~  133 (292)
T 1vl0_A           63 KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV-----G-AEIVQISTDYVFDGEAKEP-ITEFDEVNP  133 (292)
T ss_dssp             CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGSCSCCSSC-BCTTSCCCC
T ss_pred             CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEechHHeECCCCCCC-CCCCCCCCC
Confidence            69999999997532  1234678889999999999999988653     3 3999999987765321111 111122334


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh------------ccCCCHHHHHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------GNLRTSEEGADTVL  287 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------------~~~~~~~e~A~~v~  287 (339)
                      ...|+.+|++.+.+++.++.       .+..++|+.+.++ .....+.......            ..+..++|+|++++
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  205 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL  205 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHH
Confidence            56899999999999987643       4778889888876 2222222211111            23456999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++..+    .++.|.+.+++
T Consensus       206 ~~~~~~----~~~~~~i~~~~  222 (292)
T 1vl0_A          206 KVIDEK----NYGTFHCTCKG  222 (292)
T ss_dssp             HHHHHT----CCEEEECCCBS
T ss_pred             HHHhcC----CCcEEEecCCC
Confidence            999754    46677776654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.85  E-value=9.8e-20  Score=175.69  Aligned_cols=180  Identities=15%  Similarity=0.144  Sum_probs=133.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHC---CCEEEEEecCchhHHHHHHHHHhhcCC--------------ccEEEEecc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASR---GATVYMVCRSKEKGETALSAIRSKTGN--------------ENVHLELCD  120 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~---G~~Vvl~~r~~~~~~~~~~~l~~~~~~--------------~~~~~~~~D  120 (339)
                      ..++|+||||||+|+||.+++++|++.   |++|++++|+.+... ..+++.+....              .++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            357899999999999999999999999   999999999877543 23333332222              479999999


Q ss_pred             CC------CHHHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEE
Q 019551          121 LS------SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVI  194 (339)
Q Consensus       121 l~------~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv  194 (339)
                      ++      |.++++++++       ++|+||||||....      +.++..+++|+.++..+++++..    . +..++|
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~~V  210 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALT----T-KLKPFT  210 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTS----S-SCCCEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHh----C-CCCeEE
Confidence            98      5567777665       58999999998653      45677899999999999887642    2 446899


Q ss_pred             EEcCccccccccCccccccCCCCc-----------chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          195 TVSSGGMYTAHLTDDLEFNSGSFD-----------GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       195 ~vsS~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      ++||.+.+...... ...+.....           ....|+.||.+.+.+++.++.+.   |++++.++||.|.++.
T Consensus       211 ~iSS~~v~~~~~~~-~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          211 YVSTADVGAAIEPS-AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             EEEEGGGGTTSCTT-TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             EEeehhhcCccCCC-CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            99998765431111 000001111           11349999999999999988764   7999999999998763

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=2.9e-20  Score=160.45  Aligned_cols=205  Identities=15%  Similarity=0.176  Sum_probs=130.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|+||++++++|+++|++|++++|++++++...         ..+.++.+|++|.++  +.+       ..+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~~-------~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SDL-------SDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HHH-------TTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hhh-------cCCC
Confidence            5899999999999999999999999999999987654321         357889999999887  222       3789


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +||||||....           ...+|+.++    +.+++.+++. +.+++|++||.+++.............+..+...
T Consensus        64 ~vi~~ag~~~~-----------~~~~~~~~~----~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           64 VVVDAYGISPD-----------EAEKHVTSL----DHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             EEEECCCSSTT-----------TTTSHHHHH----HHHHHHHCSC-CSSEEEEECCCC-------------------CCC
T ss_pred             EEEECCcCCcc-----------ccchHHHHH----HHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            99999998432           133455554    5555556554 5789999999877643211101111111223346


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHH-----HhccCCCHHHHHHHHHHHhccCCCC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNER-----FAGNLRTSEEGADTVLWLALQPKEK  296 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~-----~~~~~~~~~e~A~~v~~l~s~~~~~  296 (339)
                      |+.+|++.+.+. .+..  ...|++++.|+||++.++..... .......     ....+.+++|+|++++.++..+.  
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--  202 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN--  202 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCS--
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc--
Confidence            999999988862 2221  15799999999999998722111 1000000     11246789999999999997653  


Q ss_pred             CCCcceeeCC
Q 019551          297 LVSGSFYFDR  306 (339)
Q Consensus       297 ~~~G~~~~d~  306 (339)
                      ..+..|.+-+
T Consensus       203 ~~g~~~~~~~  212 (221)
T 3ew7_A          203 HLNEHFTVAG  212 (221)
T ss_dssp             CTTSEEECCC
T ss_pred             ccCCEEEECC
Confidence            3345555543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.84  E-value=4.6e-20  Score=184.77  Aligned_cols=224  Identities=13%  Similarity=0.101  Sum_probs=158.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHH-HHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITE-IKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~  136 (339)
                      +++++++||||+|+||++++++|+++ |++|++++|+.++.+..       ....++.++.+|++|.++ ++++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc----
Confidence            56889999999999999999999998 89999999987653221       113468899999999765 665654    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC-
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG-  215 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~-  215 (339)
                         ++|+||||||.....  ...++++..+++|+.++..+++++.+    . + +++|++||.+.+........ .+.. 
T Consensus       382 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~-~r~V~~SS~~vyg~~~~~~~-~E~~~  449 (660)
T 1z7e_A          382 ---KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSEVYGMCSDKYF-DEDHS  449 (660)
T ss_dssp             ---HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGGGGBTCCSSSB-CTTTC
T ss_pred             ---CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHH----h-C-CEEEEEecHHHcCCCCCccc-CCCcc
Confidence               589999999975421  12345678899999999998887743    2 3 89999999877643211110 0000 


Q ss_pred             -----C-CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC----------cchhHHHHHh------
Q 019551          216 -----S-FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK----------SMPSFNERFA------  273 (339)
Q Consensus       216 -----~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~~------  273 (339)
                           + ..+...|+.||++.+.+++.++.+.   |++++.++||.+.++....          ..+.......      
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  526 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEE
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcE
Confidence                 0 1334589999999999999998775   8999999999999886431          1122211110      


Q ss_pred             --------ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 --------GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 --------~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                              ..+..++|+|+++++++..+.....++.|.+++++
T Consensus       527 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             EEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             EeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence                    12456999999999998754322344556666653

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.84  E-value=1.5e-19  Score=165.00  Aligned_cols=198  Identities=14%  Similarity=0.141  Sum_probs=144.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++++|||||+|+||++++++|+++|++|++++|+.                      .+|++|.+++.++++..     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            357899999999999999999999999999988863                      26999999999888765     


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC----C
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS----G  215 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~----~  215 (339)
                      ++|+|||+||..... ....++.+..+++|+.++..+++++..    . +..++|++||.+.+......+.....    .
T Consensus        55 ~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQ----N-DVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            699999999975311 112345678899999999999988754    2 45699999998876432111100000    1


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------cchhHHHHHh----------------
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SMPSFNERFA----------------  273 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------~~~~~~~~~~----------------  273 (339)
                      ..+....|+.+|.+.+.+++.++.+.   |++++.++||.+.+|....      ..+.......                
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence            22334689999999999999998765   7999999999999886531      1222211110                


Q ss_pred             ---ccCCCHHHHHHHHHHHhccC
Q 019551          274 ---GNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       274 ---~~~~~~~e~A~~v~~l~s~~  293 (339)
                         ..+...+|+|++++.++..+
T Consensus       206 ~~~~~~i~v~Dva~~~~~~~~~~  228 (321)
T 1e6u_A          206 TPMREFLHVDDMAAASIHVMELA  228 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHSC
T ss_pred             CEEEEeEEHHHHHHHHHHHHhCc
Confidence               01336899999999998654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.84  E-value=4.7e-20  Score=165.84  Aligned_cols=198  Identities=12%  Similarity=0.212  Sum_probs=147.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|+||++++++|+++|++|++++|.                       .+|++|.+++.++++..     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999992                       27999999999998876     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +||||||.....  ...++++..+++|+.++..+++++.+.      +.++|++||...+......+ ..+..+..+...
T Consensus        59 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~~~-~~E~~~~~p~~~  129 (287)
T 3sc6_A           59 IIIHCAAYTKVD--QAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRPEG-YDEFHNPAPINI  129 (287)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCSSC-BCTTSCCCCCSH
T ss_pred             EEEECCcccChH--HHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCCCC-CCCCCCCCCCCH
Confidence            999999976521  223567889999999999999987543      34899999988764421111 111223345678


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh------------ccCCCHHHHHHHHHHHh
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------GNLRTSEEGADTVLWLA  290 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------------~~~~~~~e~A~~v~~l~  290 (339)
                      |+.+|.+.+.+++.++.       +++.++|+.+.+|......+.......            ..+..++|+|+++++++
T Consensus       130 Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  202 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLI  202 (287)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHH
Confidence            99999999999887643       468899999998764433333222221            12345999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ..+.    +|.|.+.+++
T Consensus       203 ~~~~----~~~~~i~~~~  216 (287)
T 3sc6_A          203 HTSL----YGTYHVSNTG  216 (287)
T ss_dssp             TSCC----CEEEECCCBS
T ss_pred             hCCC----CCeEEEcCCC
Confidence            7543    6777776554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=8.1e-20  Score=166.55  Aligned_cols=215  Identities=17%  Similarity=0.173  Sum_probs=150.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..+             .+.++.+|++|.+++.++++..     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999998  899999998765321             3567889999999999888752     6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+||||||....   ...++++..+++|+.++..+++++.+    . +.+++|++||.+.+..........+..+..+.
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQ----H-RVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHH----c-CCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999999997542   12356778899999999999998753    2 45799999998877542111111111233346


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC------cc-hhHHHHHh-------------ccCCCHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK------SM-PSFNERFA-------------GNLRTSE  280 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~------~~-~~~~~~~~-------------~~~~~~~  280 (339)
                      ..|+.||++.+.+++.++.++   |++++.++|+.+..+....      .. +.......             ..+...+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            789999999999999887764   7999999876665532110      00 11111111             0123589


Q ss_pred             HHHHHHHHHhccCCCCCC-CcceeeCC
Q 019551          281 EGADTVLWLALQPKEKLV-SGSFYFDR  306 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~-~G~~~~d~  306 (339)
                      |+|++++.++..+..... ++.|.+.+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~  238 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTA  238 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCS
T ss_pred             HHHHHHHHHHhCCccccccCceEecCC
Confidence            999999998865443332 35666654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=2.5e-20  Score=166.22  Aligned_cols=197  Identities=14%  Similarity=0.105  Sum_probs=139.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|+||++++++|+ +|++|++++|+++. +          .  .   +.+|++|.++++++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~--~---~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------G--G---YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------T--C---EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------C--C---ceeccCCHHHHHHHHHhc-----CCC
Confidence            58999999999999999999 49999999998742 0          1  1   779999999999988865     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +||||||.....  .+.++++..+++|+.++..+++++.+    .  ++++|++||.+++.+...  ...+..+..+...
T Consensus        60 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~--~~~e~~~~~~~~~  129 (273)
T 2ggs_A           60 VIINAAAMTDVD--KCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKG--NYKEEDIPNPINY  129 (273)
T ss_dssp             EEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSC--SBCTTSCCCCSSH
T ss_pred             EEEECCcccChh--hhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCC--CcCCCCCCCCCCH
Confidence            999999975421  23467889999999999999998853    2  359999999887743211  1111122234568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-----------hccCCCHHHHHHHHHHHhc
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----------AGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-----------~~~~~~~~e~A~~v~~l~s  291 (339)
                      |+.+|++.+.+++.    +     ....++|+.+..+  ...........           ...+..++|+|+++++++.
T Consensus       130 Y~~sK~~~e~~~~~----~-----~~~~iR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~  198 (273)
T 2ggs_A          130 YGLSKLLGETFALQ----D-----DSLIIRTSGIFRN--KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLE  198 (273)
T ss_dssp             HHHHHHHHHHHHCC----T-----TCEEEEECCCBSS--SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC----C-----CeEEEeccccccc--cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHh
Confidence            99999999999877    2     2334445544421  11111111111           2346789999999999997


Q ss_pred             cCCCCCCCcceeeCC
Q 019551          292 QPKEKLVSGSFYFDR  306 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~  306 (339)
                      .+.    +|.|.+++
T Consensus       199 ~~~----~g~~~i~~  209 (273)
T 2ggs_A          199 LRK----TGIIHVAG  209 (273)
T ss_dssp             HTC----CEEEECCC
T ss_pred             cCc----CCeEEECC
Confidence            542    56676665

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=1.2e-19  Score=182.98  Aligned_cols=189  Identities=14%  Similarity=0.119  Sum_probs=136.2

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.+...+..+++.... ..++.++.+|++|.++++++++..  
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~--   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY--   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC--
Confidence            44678999999999999999999999999999999997654333333332221 235778899999999999888753  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC--c-ccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT--D-DLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~--~-~~~~~  213 (339)
                         ++|+||||||......  ..+..++.+++|+.++..+++++.    +. +.++||++||.+.+.....  . ....+
T Consensus        84 ---~~D~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~----~~-~~~~iV~~SS~~vyg~~~~~~~~~~~~E  153 (699)
T 1z45_A           84 ---KIDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQ----QY-NVSKFVFSSSATVYGDATRFPNMIPIPE  153 (699)
T ss_dssp             ---CCCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHH----HH-TCCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             ---CCCEEEECCcccCcCc--cccCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEECcHHHhCCCccccccCCccc
Confidence               7999999999754211  123345678999999999887653    33 4579999999877643210  0 00111


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      ..+..+...|+.||++.+.+++.++.+. ..|+++..++|+.+..+
T Consensus       154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          154 ECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence            1223345689999999999999998775 46899999999888765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=1.1e-19  Score=164.93  Aligned_cols=217  Identities=13%  Similarity=0.071  Sum_probs=151.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++|||||+|+||++++++|+++| ++|++++|+.+...  ...+.    +  +. +.+|++|.+.++++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999999865421  11111    1  12 668999888887766521  12369


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||....    +.++++..+++|+.++..+++++.+.     +. ++|++||.+.+....... ..+..+..+..
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~~~~~-~~E~~~~~p~~  138 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRTSDF-IESREYEKPLN  138 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGTTCCSCB-CSSGGGCCCSS
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhCCCCCCC-CCCCCCCCCCC
Confidence            999999997653    34567888999999999999987543     34 999999987764321100 00111223356


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc------CcchhHHHH---------H------hccCCCHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA------KSMPSFNER---------F------AGNLRTSE  280 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~------~~~~~~~~~---------~------~~~~~~~~  280 (339)
                      .|+.+|.+.+.+++.++.+   .|++++.++||.+.+|...      ...+.....         +      ...+...+
T Consensus       139 ~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~  215 (310)
T 1eq2_A          139 VYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  215 (310)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHH
Confidence            8999999999999988765   4899999999999998643      111111110         0      11234589


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++.++..+.    ++.|.+.+++
T Consensus       216 Dva~~~~~~~~~~~----~~~~~i~~~~  239 (310)
T 1eq2_A          216 DVADVNLWFLENGV----SGIFNLGTGR  239 (310)
T ss_dssp             HHHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             HHHHHHHHHHhcCC----CCeEEEeCCC
Confidence            99999999987543    6677775543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.81  E-value=5e-19  Score=160.65  Aligned_cols=213  Identities=15%  Similarity=0.142  Sum_probs=146.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++++|||||+|+||++++++|+++|+      +...             ....+..+.+|++|.+++.++++..    
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhhc----
Confidence            5689999999999999999999999998      1110             0112334578999999999988753    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC----ccccccC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT----DDLEFNS  214 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~----~~~~~~~  214 (339)
                       ++|+|||+||.... ...+.+..+..+++|+.++..+++++..    . +..++|++||.+.+.....    .+.....
T Consensus        61 -~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  133 (319)
T 4b8w_A           61 -QPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFE----V-GARKVVSCLSTCIFPDKTTYPIDETMIHNG  133 (319)
T ss_dssp             -CCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEECCGGGSCSSCCSSBCGGGGGBS
T ss_pred             -CCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEEcchhhcCCCCCCCccccccccC
Confidence             69999999998431 1123355677899999999999887643    2 4568999999877643211    1111111


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHH----H-h----------
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNER----F-A----------  273 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~----~-~----------  273 (339)
                      ...+....|+.+|.+.+.+++.++.+.   |++++.++|+.+.+|.....      .+.....    . .          
T Consensus       134 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (319)
T 4b8w_A          134 PPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTG  210 (319)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCC
Confidence            223334579999999999999988775   79999999999998865321      1222221    1 1          


Q ss_pred             ---ccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          274 ---GNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       274 ---~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                         ..+...+|+|++++.++..+.. ..++.|.+.
T Consensus       211 ~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~  244 (319)
T 4b8w_A          211 NPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVG  244 (319)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCC
T ss_pred             CeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEec
Confidence               1235689999999999875332 223344443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.81  E-value=4.5e-20  Score=168.25  Aligned_cols=218  Identities=15%  Similarity=0.068  Sum_probs=144.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++++++|||||+|+||++++++|+++|++|++++|+.+......+.+........+.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            35678999999999999999999999999999999986520000011111111123344445544               


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                        ++|+|||+||......  ..+.....++ |+.++..+++++...     +..++|++||.+.+......+ ..+..+.
T Consensus        69 --~~d~vi~~a~~~~~~~--~~~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~v~~~~~~~~-~~E~~~~  137 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPR--SFKQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCEVYGQADTLP-TPEDSPL  137 (321)
T ss_dssp             --TEEEEEECCCCCCHHH--HTTSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCSSSS-BCTTSCC
T ss_pred             --cCCEEEECCccCChHH--HHhCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHHHhCCCCCCC-CCCCCCC
Confidence              7999999999765211  1233445567 999999988887443     357999999988775431111 1112233


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCe-EEEEeeCCcccCCCccCc--chhHHHHHh--------------ccCCCHH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGI-GFYSMHPGWAETPGVAKS--MPSFNERFA--------------GNLRTSE  280 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~~~~--~~~~~~~~~--------------~~~~~~~  280 (339)
                      .+...|+.+|.+.+.+++.++.+   .|+ +++.++|+.+.+|.....  .+.......              ..+..++
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence            45678999999999999988765   588 999999999998865431  222211110              1234799


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+++++++..+..    |.|.+.+++
T Consensus       215 Dva~~~~~~~~~~~~----g~~~i~~~~  238 (321)
T 3vps_A          215 DVVDKLVALANRPLP----SVVNFGSGQ  238 (321)
T ss_dssp             HHHHHHHHGGGSCCC----SEEEESCSC
T ss_pred             HHHHHHHHHHhcCCC----CeEEecCCC
Confidence            999999999975433    466666554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.81  E-value=4e-20  Score=166.33  Aligned_cols=208  Identities=16%  Similarity=0.106  Sum_probs=146.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++++|||| +|+||++++++|+++|++|++++|+.+++            ..++.++.+|++|.+++.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------C
Confidence            357899999 59999999999999999999999987641            2467889999999998877654      3


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ++|+|||+||...       .+.+..+++|+.++..+++++.    +. +.+++|++||.+.+...... ...+..+..+
T Consensus        63 ~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~ll~a~~----~~-~~~~~v~~SS~~vyg~~~~~-~~~E~~~~~p  129 (286)
T 3gpi_A           63 RPEILVYCVAASE-------YSDEHYRLSYVEGLRNTLSALE----GA-PLQHVFFVSSTGVYGQEVEE-WLDEDTPPIA  129 (286)
T ss_dssp             CCSEEEECHHHHH-------HC-----CCSHHHHHHHHHHTT----TS-CCCEEEEEEEGGGCCCCCSS-EECTTSCCCC
T ss_pred             CCCEEEEeCCCCC-------CCHHHHHHHHHHHHHHHHHHHh----hC-CCCEEEEEcccEEEcCCCCC-CCCCCCCCCC
Confidence            6999999999742       4456778999999999888764    22 45799999998876543111 1111223345


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH-------hccCCCHHHHHHHHHHHhcc
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-------AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-------~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ...|+.+|.+.+.+ +..        ++++.++||.+.++.............       ...+..++|+|+++++++..
T Consensus       130 ~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  200 (286)
T 3gpi_A          130 KDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQ  200 (286)
T ss_dssp             CSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhh
Confidence            67899999998887 432        889999999999876442211111100       11245689999999999976


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                      +.....++.|.+.+++
T Consensus       201 ~~~~~~~~~~~~~~~~  216 (286)
T 3gpi_A          201 RSHAVPERLYIVTDNQ  216 (286)
T ss_dssp             HTTSCCCSEEEECCSC
T ss_pred             hccCCCCceEEEeCCC
Confidence            4323446667665543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.81  E-value=7.4e-19  Score=157.88  Aligned_cols=191  Identities=13%  Similarity=0.043  Sum_probs=139.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      |+++||||+|+||++++++|+++  |++|++++|++++.+...    .    ..+.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  999999999987654322    1    257788999999998887765       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      .+|++|||||...     . +      ++|+.++..+++++.    +. +.+++|++||.+.+..           +   
T Consensus        66 ~~d~vi~~a~~~~-----~-~------~~n~~~~~~l~~a~~----~~-~~~~~v~~Ss~~~~~~-----------~---  114 (287)
T 2jl1_A           66 GVSKLLFISGPHY-----D-N------TLLIVQHANVVKAAR----DA-GVKHIAYTGYAFAEES-----------I---  114 (287)
T ss_dssp             TCSEEEECCCCCS-----C-H------HHHHHHHHHHHHHHH----HT-TCSEEEEEEETTGGGC-----------C---
T ss_pred             cCCEEEEcCCCCc-----C-c------hHHHHHHHHHHHHHH----Hc-CCCEEEEECCCCCCCC-----------C---
Confidence            5899999998521     1 1      578888888887763    23 4579999999876411           1   


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH---------HhccCCCHHHHHHHHHHHh
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER---------FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---------~~~~~~~~~e~A~~v~~l~  290 (339)
                       ..|+.+|.+.+.+.+.       .|++++.++||++.++............         ....+..++|+|++++.++
T Consensus       115 -~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  186 (287)
T 2jl1_A          115 -IPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVL  186 (287)
T ss_dssp             -STHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHH
T ss_pred             -CchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHh
Confidence             2699999999988753       5899999999998876522222111111         0124568999999999998


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ..+.  ..++.|.+.+++
T Consensus       187 ~~~~--~~g~~~~i~~~~  202 (287)
T 2jl1_A          187 TEEG--HENKTYNLVSNQ  202 (287)
T ss_dssp             TSSS--CTTEEEEECCSS
T ss_pred             cCCC--CCCcEEEecCCC
Confidence            7543  234566676653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.80  E-value=3e-19  Score=161.38  Aligned_cols=205  Identities=14%  Similarity=0.087  Sum_probs=146.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++||||+|+||++++++|+ +|++|++++|+.+                   .+.+|++|.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999999862                   2468999999999888754     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +|||+||.....  .+.++++..+++|+.++..+++++..    .  +.++|++||.+.+...... ...+..+..+...
T Consensus        57 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~vy~~~~~~-~~~E~~~~~p~~~  127 (299)
T 1n2s_A           57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVFPGTGDI-PWQETDATSPLNV  127 (299)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGSCCCTTC-CBCTTSCCCCSSH
T ss_pred             EEEECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEecccEEeCCCCC-CCCCCCCCCCccH
Confidence            999999965421  12356778899999999999987732    2  3489999998876542111 1111122334568


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh------------ccCCCHHHHHHHHHHHh
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------GNLRTSEEGADTVLWLA  290 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------------~~~~~~~e~A~~v~~l~  290 (339)
                      |+.+|++.+.+++.++.       +++.++||.+.++......+.......            ..+..++|+|+++++++
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  200 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAI  200 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHH
Confidence            99999999998877632       789999999999865432222222211            12334899999999998


Q ss_pred             ccCCCCC-CCcceeeCCCC
Q 019551          291 LQPKEKL-VSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~-~~G~~~~d~~~  308 (339)
                      ..+.... .++.|.+.+++
T Consensus       201 ~~~~~~~~~~~~~~i~~~~  219 (299)
T 1n2s_A          201 RVALNKPEVAGLYHLVAGG  219 (299)
T ss_dssp             HHHHHCGGGCEEEECCCBS
T ss_pred             HHhccccccCceEEEeCCC
Confidence            7532111 35666665543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=3.7e-18  Score=165.90  Aligned_cols=221  Identities=14%  Similarity=0.127  Sum_probs=152.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH---HHHHHHHHhh-------cCCccEEEEeccCCCHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG---ETALSAIRSK-------TGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~---~~~~~~l~~~-------~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      .++||||||||+||.+++++|.+.|++|++++|+.++.   +...+.+...       ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999999999999999998732   2333333221       11347999999999988776  


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC---
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT---  207 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~---  207 (339)
                            ....+|+||||||....     ...++..+++|+.++..+++++.+      ...++|++||.+. +....   
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS~~v-G~~~~~~~  289 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV-GTYFDIDT  289 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEESCT-TSEECTTC
T ss_pred             ------CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCChhh-ccCCccCC
Confidence                  34689999999997642     245677889999999999998754      3578999999877 21110   


Q ss_pred             ccccccC-C---CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---------chhHHHHHh-
Q 019551          208 DDLEFNS-G---SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---------MPSFNERFA-  273 (339)
Q Consensus       208 ~~~~~~~-~---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---------~~~~~~~~~-  273 (339)
                      .+.++.. .   +......|+.+|.+.+.+++.++.    .|++++.++||.|.++.....         ......... 
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~  365 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ  365 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH
Confidence            1111111 1   122457899999999998887643    699999999999998754432         112222211 


Q ss_pred             ------------ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 ------------GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 ------------~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                                  ..+...+|+|+++++++..+.   .++.|.+.++.
T Consensus       366 ~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~  409 (508)
T 4f6l_B          366 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPN  409 (508)
T ss_dssp             CSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSC
T ss_pred             cCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCC
Confidence                        124558999999999987544   56677676554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.78  E-value=3.6e-18  Score=153.19  Aligned_cols=187  Identities=14%  Similarity=0.092  Sum_probs=130.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++||||+|+||++++++|+++  |++|++++|++++.+....        ..+.++.+|++|.+++.++++       .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--------QGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH--------TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc--------CCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3799999999999999999998  9999999999876543221        247788999999998887764       5


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+||||||...              ..|+.++..+++++    ++. +.+++|++||.+.+.           .    .
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~----~~~-~~~~~v~~Ss~~~~~-----------~----~  111 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAA----KAA-GVKFIAYTSLLHADT-----------S----P  111 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHH----HHH-TCCEEEEEEETTTTT-----------C----C
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHH----HHc-CCCEEEEECCCCCCC-----------C----c
Confidence            899999998531              13555655555544    444 457999999987651           1    1


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH---------HhccCCCHHHHHHHHHHHhc
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER---------FAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---------~~~~~~~~~e~A~~v~~l~s  291 (339)
                      ..|+.+|.+.+.+.+.       .|++++.++||++.++... ........         ....+..++|+|+++++++.
T Consensus       112 ~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  183 (286)
T 2zcu_A          112 LGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLA-SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVIS  183 (286)
T ss_dssp             STTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHT-THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHH-HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhc
Confidence            3699999999988763       4899999999998876432 11111110         01235689999999999997


Q ss_pred             cCCCCCCCcceeeCCCC
Q 019551          292 QPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~  308 (339)
                      .+.  ..++.|.+.+++
T Consensus       184 ~~~--~~g~~~~i~~~~  198 (286)
T 2zcu_A          184 EAG--HEGKVYELAGDS  198 (286)
T ss_dssp             SSS--CTTCEEEECCSS
T ss_pred             CCC--CCCceEEEeCCC
Confidence            543  245566676653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.76  E-value=6.4e-18  Score=152.86  Aligned_cols=200  Identities=15%  Similarity=0.039  Sum_probs=135.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +|+++||||||+||++++++|+++| ++|++++|++++...  +.+..    ..+.++.+|++|.+++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5799999999999999999999999 999999999876431  22221    247788999999999988775       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      .+|+||||+|.....          ..+.|+.+    ++.+++.+++. +.++||++|+.+.+...          ....
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~~----~~~~~~aa~~~-gv~~iv~~S~~~~~~~~----------~~~~  126 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVKQ----GKLLADLARRL-GLHYVVYSGLENIKKLT----------AGRL  126 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHHH----HHHHHHHHHHH-TCSEEEECCCCCHHHHT----------TTSC
T ss_pred             cCCEEEEeCCCCccc----------cchHHHHH----HHHHHHHHHHc-CCCEEEEEcCccccccC----------CCcc
Confidence            589999999854211          12344444    44555555555 56799997665543210          0012


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh---HH---------HHHhccCCCHHHHHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS---FN---------ERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~---------~~~~~~~~~~~e~A~~v~  287 (339)
                      ...|+.+|++.+.+.+.       .|++++.++||++.+++.....+.   ..         ......+..++|+|+.++
T Consensus       127 ~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~  199 (299)
T 2wm3_A          127 AAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVL  199 (299)
T ss_dssp             CCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHH
T ss_pred             cCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHH
Confidence            35799999999988764       389999999999998754321110   00         000123557999999999


Q ss_pred             HHhccCCCCCCCcceeeCC
Q 019551          288 WLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~  306 (339)
                      .++..+. ...++.|.+.+
T Consensus       200 ~~l~~~~-~~~g~~~~~~g  217 (299)
T 2wm3_A          200 SLLKMPE-KYVGQNIGLST  217 (299)
T ss_dssp             HHHHSHH-HHTTCEEECCS
T ss_pred             HHHcChh-hhCCeEEEeee
Confidence            9987532 12344455554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.73  E-value=1.2e-16  Score=143.50  Aligned_cols=197  Identities=11%  Similarity=-0.009  Sum_probs=135.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++|||| |+||++++++|+++|++|++++|++++......        ..+.++.+|++|.+            ...+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cCCC
Confidence            78999998 999999999999999999999999887554322        25889999999833            3579


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-CCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA-APDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      |+|||+||.....     +.              .++.++..+++. .+..++|++||.+.+...... ...+..+..+.
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~-~~~E~~~~~p~  124 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGA-WVDETTPLTPT  124 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTC-EECTTSCCCCC
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCC-CcCCCCCCCCC
Confidence            9999999975432     11              123444445442 145799999998776543211 11112233445


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hH-----HHHHhccCCCHHHHHHHHHHHhcc
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SF-----NERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~-----~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      ..|+.+|.+.+.+.+.+      .|++++.++||.+.++.......   ..     .......+...+|+|+++++++..
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            68999999999888766      68999999999998875322100   00     000112345689999999999975


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                      +.   .++.|.+.+++
T Consensus       199 ~~---~g~~~~i~~~~  211 (286)
T 3ius_A          199 PD---PGAVYNVCDDE  211 (286)
T ss_dssp             CC---TTCEEEECCSC
T ss_pred             CC---CCCEEEEeCCC
Confidence            44   35567665543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.73  E-value=1.9e-16  Score=146.21  Aligned_cols=198  Identities=13%  Similarity=0.146  Sum_probs=134.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc----hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK----EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++.++++||||||+||++++++|++.|++|++++|+.    ++.+ ..+++.    ..++.++.+|++|.+++.+++++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALE----DKGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHH----HTTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHH----hCCcEEEEeecCCHHHHHHHHhhC
Confidence            3467899999999999999999999999999999987    2222 122222    236889999999999999888763


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                           .+|+|||+||..                 |+.++..+++++.    +.+.-.++|+ |+.+...        ...
T Consensus        83 -----~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~--------~e~  127 (346)
T 3i6i_A           83 -----EIDIVVSTVGGE-----------------SILDQIALVKAMK----AVGTIKRFLP-SEFGHDV--------NRA  127 (346)
T ss_dssp             -----TCCEEEECCCGG-----------------GGGGHHHHHHHHH----HHCCCSEEEC-SCCSSCT--------TTC
T ss_pred             -----CCCEEEECCchh-----------------hHHHHHHHHHHHH----HcCCceEEee-cccCCCC--------Ccc
Confidence                 699999999872                 7777777777654    3312456665 4322110        011


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHH-----H--------HHhccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFN-----E--------RFAGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-----~--------~~~~~~~~~~e  281 (339)
                      .+.++...|+.+|.+.+.+.+.       .|++++.++||++.............     .        .....+..++|
T Consensus       128 ~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~D  200 (346)
T 3i6i_A          128 DPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTD  200 (346)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHH
T ss_pred             CcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHH
Confidence            2345567899999998877654       58999999999988754322211000     0        00123567999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      +|+.+++++.++.  ..++.+++-
T Consensus       201 va~~~~~~l~~~~--~~~~~~~i~  222 (346)
T 3i6i_A          201 IGKFTMKTVDDVR--TLNKSVHFR  222 (346)
T ss_dssp             HHHHHHHHTTCGG--GTTEEEECC
T ss_pred             HHHHHHHHHhCcc--ccCeEEEEe
Confidence            9999999987542  335555554

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.73  E-value=4.9e-17  Score=150.74  Aligned_cols=197  Identities=12%  Similarity=-0.011  Sum_probs=133.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEecc-CCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD-LSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~  138 (339)
                      .+++++||||||+||++++++|+++|++|++++|++++..  .+++..   ...+.++.+| ++|.+++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh------
Confidence            4678999999999999999999999999999999987642  122321   1357888999 999999988765      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEcCccc-cccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVSSGGM-YTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vsS~~~-~~~~~~~~~~~~~~~  216 (339)
                       .+|++|||++...             .+.|..+     +.+++.+++. + .+++|++||... ...            
T Consensus        73 -~~d~Vi~~a~~~~-------------~~~~~~~-----~~l~~aa~~~-g~v~~~V~~SS~~~~~~~------------  120 (352)
T 1xgk_A           73 -GAHLAFINTTSQA-------------GDEIAIG-----KDLADAAKRA-GTIQHYIYSSMPDHSLYG------------  120 (352)
T ss_dssp             -TCSEEEECCCSTT-------------SCHHHHH-----HHHHHHHHHH-SCCSEEEEEECCCGGGTS------------
T ss_pred             -cCCEEEEcCCCCC-------------cHHHHHH-----HHHHHHHHHc-CCccEEEEeCCccccccC------------
Confidence             5899999987532             0224433     4445555555 4 579999999762 211            


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc---ch-h--HHHH-----H-----hccCCCH-
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS---MP-S--FNER-----F-----AGNLRTS-  279 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~---~~-~--~~~~-----~-----~~~~~~~-  279 (339)
                      .+....|+.+|++.+.+++.       .|++++.|+||++.+......   .. .  ....     +     ...+..+ 
T Consensus       121 ~~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~  193 (352)
T 1xgk_A          121 PWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAE  193 (352)
T ss_dssp             SCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHH
T ss_pred             CCCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecH
Confidence            12235688999999998865       289999999998765432210   00 0  0000     0     1124567 


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +|+|++++.++.++.....++.|.+.+
T Consensus       194 ~Dva~ai~~~l~~~~~~~~g~~~~l~~  220 (352)
T 1xgk_A          194 HDVGPALLQIFKDGPQKWNGHRIALTF  220 (352)
T ss_dssp             HHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred             HHHHHHHHHHHhCCchhhCCeEEEEec
Confidence            899999999987543223455666653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.72  E-value=1.5e-16  Score=144.07  Aligned_cols=195  Identities=13%  Similarity=0.110  Sum_probs=128.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-------hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-------EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++++||||||+||++++++|+++|++|++++|+.       ++.+.. +++..    ..+.++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            46899999999999999999999999999999987       443322 23321    257889999999999888775 


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                            .+|+||||||...                 +.+...+++    .+++.+...++|.  |..+...  ..    .
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~~l~~----aa~~~g~v~~~v~--S~~g~~~--~~----~  120 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQVKIIK----AIKEAGNVKKFFP--SEFGLDV--DR----H  120 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHHHHHH----HHHHHCCCSEEEC--SCCSSCT--TS----C
T ss_pred             ------CCCEEEECCcccc-----------------cccHHHHHH----HHHhcCCceEEee--cccccCc--cc----c
Confidence                  5999999998642                 223333444    4444422567763  3322110  00    0


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHHH-------HHhccCCCHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFNE-------RFAGNLRTSE  280 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~-------~~~~~~~~~~  280 (339)
                      ....+....| .+|++++.+.+.       .|++++.++||++.+++......      ....       .....+..++
T Consensus       121 ~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (307)
T 2gas_A          121 DAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEA  192 (307)
T ss_dssp             CCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHH
T ss_pred             cCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHH
Confidence            1223456789 999998887753       37999999999998865322110      0000       0112356899


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      |+|+.++.++.++.  ..++.+++.+
T Consensus       193 Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          193 DVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHHcCcc--ccCceEEEeC
Confidence            99999999997543  2344555543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.71  E-value=9e-17  Score=144.51  Aligned_cols=187  Identities=14%  Similarity=0.114  Sum_probs=125.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++|||||||+||++++++|.+. |++|++++|++++....    .    ...+.++.+|++|++++.++++       .+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998 99999999998764321    1    2368899999999999887765       68


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+||||||.....            ..|+.++    +.+++.+++. +.++||++||.+....          .+++   
T Consensus        67 d~vi~~a~~~~~~------------~~~~~~~----~~l~~aa~~~-gv~~iv~~Ss~~~~~~----------~~~~---  116 (289)
T 3e48_A           67 DTVVFIPSIIHPS------------FKRIPEV----ENLVYAAKQS-GVAHIIFIGYYADQHN----------NPFH---  116 (289)
T ss_dssp             SEEEECCCCCCSH------------HHHHHHH----HHHHHHHHHT-TCCEEEEEEESCCSTT----------CCST---
T ss_pred             CEEEEeCCCCccc------------hhhHHHH----HHHHHHHHHc-CCCEEEEEcccCCCCC----------CCCc---
Confidence            9999999865321            2244444    4455555554 4679999999653211          1111   


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH---------hccCCCHHHHHHHHHHHhcc
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF---------AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~~~~e~A~~v~~l~s~  292 (339)
                         .++...     .+...++..|++++.++||++.+++.. ..+......         ...+..++|+|+.+++++..
T Consensus       117 ---~~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  187 (289)
T 3e48_A          117 ---MSPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKP-YLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKN  187 (289)
T ss_dssp             ---THHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHH-HHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHC
T ss_pred             ---cchhHH-----HHHHHHHHcCCCEEEEeccccccccHH-HHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcC
Confidence               111110     112223346899999999999987532 111111110         01256899999999999986


Q ss_pred             CCCCCCCcceeeC
Q 019551          293 PKEKLVSGSFYFD  305 (339)
Q Consensus       293 ~~~~~~~G~~~~d  305 (339)
                      +...  ++.|.+.
T Consensus       188 ~~~~--g~~~~~~  198 (289)
T 3e48_A          188 PDTW--GKRYLLS  198 (289)
T ss_dssp             GGGT--TCEEEEC
T ss_pred             CCcC--CceEEeC
Confidence            5432  5566667

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.69  E-value=3.1e-16  Score=152.61  Aligned_cols=208  Identities=19%  Similarity=0.116  Sum_probs=140.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++||||||+|+||.+++++|+++|++|++++|+.++.+                .+.+|+.+..         .+.+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccchh---------HHhcCC
Confidence            578999999999999999999999999999999876421                1456775421         233457


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+|||+||..... ..+.+..+..+++|+.++..+++++.    +..+.+++|++||.+.+.... ....+......+.
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a----~~~~~~r~V~~SS~~vyg~~~-~~~~~~E~~~~~~  275 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVA----ESTQCTTMISASAVGFYGHDR-GDEILTEESESGD  275 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHH----HCSSCCEEEEEEEGGGGCSEE-EEEEECTTSCCCS
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHH----hcCCCCEEEEeCcceEecCCC-CCCccCCCCCCCc
Confidence            99999999976433 34556778899999999999999643    222457999999988775211 1111111122245


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh-------------ccCCCHHHHHHHHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------------GNLRTSEEGADTVL  287 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~~~e~A~~v~  287 (339)
                      ..|+.+|...+.+.+    +....|++++.++||.+.++.. ...+.......             ..+...+|+|++++
T Consensus       276 ~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~-~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~  350 (516)
T 3oh8_A          276 DFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRG-GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYY  350 (516)
T ss_dssp             SHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTB-SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCC-ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHH
Confidence            678888887766543    3345799999999999999752 11111111110             12456899999999


Q ss_pred             HHhccCCCCCCCcceeeCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +++..+.   .+|.|.+-++
T Consensus       351 ~~l~~~~---~~g~~ni~~~  367 (516)
T 3oh8_A          351 RAIVDAQ---ISGPINAVAP  367 (516)
T ss_dssp             HHHHCTT---CCEEEEESCS
T ss_pred             HHHhCcc---cCCcEEEECC
Confidence            9997543   3566766433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.68  E-value=4.4e-16  Score=145.05  Aligned_cols=181  Identities=18%  Similarity=0.108  Sum_probs=135.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++|||||+|+||++++++|+++|+ +|+.++|+                           .|.++++++++       .+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 88777764                           67788887776       48


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      |+|||+||....      +..+..+++|+.++..+++++    ++.+...++|++||...+.                ..
T Consensus        48 d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----------------~~  101 (369)
T 3st7_A           48 DFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----------------DN  101 (369)
T ss_dssp             SEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----------------CS
T ss_pred             CEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----------------CC
Confidence            999999997653      345667889999998888875    2332234899999987762                45


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc----chhHHHHHh-------------ccCCCHHHHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS----MPSFNERFA-------------GNLRTSEEGAD  284 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~----~~~~~~~~~-------------~~~~~~~e~A~  284 (339)
                      .|+.+|++.+.+.+.++.+.   |+++..++|+.+.++.....    .+.......             ..+..++|+|+
T Consensus       102 ~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  178 (369)
T 3st7_A          102 PYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVA  178 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHH
Confidence            89999999999999998875   78999999999998754332    122221111             12345899999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +++.++..+... .++.|.+.++
T Consensus       179 ~~~~~l~~~~~~-~~~~~~i~~~  200 (369)
T 3st7_A          179 EIKRAIEGTPTI-ENGVPTVPNV  200 (369)
T ss_dssp             HHHHHHHTCCCE-ETTEECCSCC
T ss_pred             HHHHHHhCCccc-CCceEEeCCC
Confidence            999999754321 2455555544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=1.2e-15  Score=139.08  Aligned_cols=196  Identities=12%  Similarity=0.053  Sum_probs=125.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-h----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-E----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++||||+|+||++++++|+++|++|++++|+. +    ...+..+++..    ..+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCHHHHHHHHc---
Confidence            46799999999999999999999999999999986 2    11222222221    257889999999999888776   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          .+|+||||||...                 +.+    ++.+++.+++.+..+++|.  |..+...    +.  ...
T Consensus        77 ----~~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~g~v~~~v~--S~~g~~~----~~--~~~  123 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-----------------ISS----QIHIINAIKAAGNIKRFLP--SDFGCEE----DR--IKP  123 (321)
T ss_dssp             ----TCSEEEECCCGGG-----------------SGG----GHHHHHHHHHHCCCCEEEC--SCCSSCG----GG--CCC
T ss_pred             ----CCCEEEECCCccc-----------------hhh----HHHHHHHHHHhCCccEEec--cccccCc----cc--ccc
Confidence                5899999998642                 122    2444445555521467772  3322110    00  011


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-------chh-----HH-HHHhccCCCHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-------MPS-----FN-ERFAGNLRTSEEG  282 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-------~~~-----~~-~~~~~~~~~~~e~  282 (339)
                      ..+....| .+|++++.+.+.       .|++++.++||++.++.....       ...     .. ......+..++|+
T Consensus       124 ~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (321)
T 3c1o_A          124 LPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDI  195 (321)
T ss_dssp             CHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHH
T ss_pred             CCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHH
Confidence            22335689 999999887763       378889999998865422100       000     00 0011235689999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      |+.++.++.++.  ..++.+++.+
T Consensus       196 a~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          196 AKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHHHhCcc--ccCeEEEEeC
Confidence            999999997543  2244456654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.66  E-value=3.5e-15  Score=138.25  Aligned_cols=215  Identities=15%  Similarity=0.130  Sum_probs=138.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG-----ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G-----~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|||||+|+||++++++|+++|     ++|++++|+.+...         ....++.++.+|++|.+++.++++.. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            4689999999999999999999999     99999999876422         01246888999999999888776532 


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEE-------EEcCccccccccCc
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVI-------TVSSGGMYTAHLTD  208 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv-------~vsS~~~~~~~~~~  208 (339)
                         +++|+|||+||...       ++.+..+++|+.++..+++++.+...   +..++|       ++||.+.+......
T Consensus        71 ---~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             ---TTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             ---CCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEeccCceEEEechhhccccccC
Confidence               24999999999753       34677899999999999998754311   235666       68887665432100


Q ss_pred             ccccc-CC-CCcchHHHHHhHHHHHHHHHHHHHHHcCCC-eEEEEeeCCcccCCCccCcch----h-HHHHH---hc---
Q 019551          209 DLEFN-SG-SFDGMEQYARNKRVQVALTEKWSEMYKEKG-IGFYSMHPGWAETPGVAKSMP----S-FNERF---AG---  274 (339)
Q Consensus       209 ~~~~~-~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g-I~v~~v~PG~v~T~~~~~~~~----~-~~~~~---~~---  274 (339)
                      ..+.. .. ..+....|.    +.+.+++.++.   ..| ++++.++|+.+..|.......    . .....   .+   
T Consensus       138 ~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL  210 (364)
T ss_dssp             CSSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB
T ss_pred             CCCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce
Confidence            11111 11 112233552    23333333322   245 999999999999875432111    0 11111   11   


Q ss_pred             -------------cCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          275 -------------NLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       275 -------------~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                                   .+...+|+|++++.++..+..  .++.|.+.++
T Consensus       211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~--~g~~~ni~~~  254 (364)
T 2v6g_A          211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA--KNEAFNVSNG  254 (364)
T ss_dssp             CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG--TTEEEEECCS
T ss_pred             ecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC--CCceEEecCC
Confidence                         122348899999999864321  2345666444

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.66  E-value=1.5e-15  Score=137.96  Aligned_cols=200  Identities=14%  Similarity=0.125  Sum_probs=128.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++||||||+||++++++|+++|++|++++|+..     +.+. .+++.    ...+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            467999999999999999999999999999999853     2221 22222    2357889999999999888775   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          .+|+|||++|.....             .|+.+...++++    +++.+..+++|+ |+.+.....      ....
T Consensus        76 ----~~d~vi~~a~~~~~~-------------~~~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~------~~~~  127 (313)
T 1qyd_A           76 ----QVDVVISALAGGVLS-------------HHILEQLKLVEA----IKEAGNIKRFLP-SEFGMDPDI------MEHA  127 (313)
T ss_dssp             ----TCSEEEECCCCSSSS-------------TTTTTHHHHHHH----HHHSCCCSEEEC-SCCSSCTTS------CCCC
T ss_pred             ----CCCEEEECCccccch-------------hhHHHHHHHHHH----HHhcCCCceEEe-cCCcCCccc------cccC
Confidence                599999999975421             255555555554    444421567874 332211100      0011


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-------h--HHH-----HHhccCCCHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-------S--FNE-----RFAGNLRTSEE  281 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-------~--~~~-----~~~~~~~~~~e  281 (339)
                      ..+....| .+|.+.+.+.+       ..|++++.++||++.+++......       .  ...     .....+..++|
T Consensus       128 ~~p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D  199 (313)
T 1qyd_A          128 LQPGSITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDD  199 (313)
T ss_dssp             CSSTTHHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHH
T ss_pred             CCCCcchH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHH
Confidence            12445678 99999888765       258999999999886532211100       0  000     00123567999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +|+.++.++.++.  ..++.+++.+
T Consensus       200 va~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          200 VGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHHHhCcc--cCCceEEEeC
Confidence            9999999987543  2344555544

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.65  E-value=7e-16  Score=140.64  Aligned_cols=196  Identities=12%  Similarity=0.123  Sum_probs=125.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .|+++||||||+||++++++|+++|++|++++|+.+...+..+++..    ..+.++.+|++|.+++.++++       .
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------K   79 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------C
Confidence            36799999999999999999999999999999987522222223322    257889999999999888775       5


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      +|+||||+|...                 +.+    ++.+++.+++.+..+++|+ |+ .+...  ..    .....+..
T Consensus        80 ~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~g~v~~~v~-S~-~g~~~--~~----~~~~~p~~  130 (318)
T 2r6j_A           80 VDVVISALAFPQ-----------------ILD----QFKILEAIKVAGNIKRFLP-SD-FGVEE--DR----INALPPFE  130 (318)
T ss_dssp             CSEEEECCCGGG-----------------STT----HHHHHHHHHHHCCCCEEEC-SC-CSSCT--TT----CCCCHHHH
T ss_pred             CCEEEECCchhh-----------------hHH----HHHHHHHHHhcCCCCEEEe-ec-cccCc--cc----ccCCCCcc
Confidence            899999998642                 122    2444445555522567774 33 22110  00    00112335


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----h-h----HH-HHHhccCCCHHHHHHHHHHHh
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----P-S----FN-ERFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~-~----~~-~~~~~~~~~~~e~A~~v~~l~  290 (339)
                      ..| .+|.+++.+.+.       .|++++.++||++.........    . .    .. ......+..++|+|+.++.++
T Consensus       131 ~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (318)
T 2r6j_A          131 ALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA  202 (318)
T ss_dssp             HHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred             hhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence            678 999998887653       4789999999987653211000    0 0    00 000123567999999999998


Q ss_pred             ccCCCCCCCcceeeCC
Q 019551          291 LQPKEKLVSGSFYFDR  306 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~  306 (339)
                      ..+.  ..++.+++.+
T Consensus       203 ~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          203 TDPR--ALNRVVIYRP  216 (318)
T ss_dssp             TCGG--GTTEEEECCC
T ss_pred             cCcc--ccCeEEEecC
Confidence            7543  2345555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.64  E-value=1.1e-15  Score=138.46  Aligned_cols=199  Identities=11%  Similarity=0.121  Sum_probs=125.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKG--ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++++||||||+||++++++|+++|++|++++|+....  .+..+.+.... ...+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999985321  11111121111 2358889999999999988876      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       .+|+|||+||...                 +.+.    +.+++.+++.+...++|+ |+.+....   .    .....+
T Consensus        77 -~~d~vi~~a~~~~-----------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~~~---~----~~~~~p  126 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ-----------------IESQ----VNIIKAIKEVGTVKRFFP-SEFGNDVD---N----VHAVEP  126 (308)
T ss_dssp             -TCSEEEECCCGGG-----------------SGGG----HHHHHHHHHHCCCSEEEC-SCCSSCTT---S----CCCCTT
T ss_pred             -CCCEEEECCcchh-----------------hhhH----HHHHHHHHhcCCCceEee-cccccCcc---c----cccCCc
Confidence             5899999998642                 1222    334444555422567773 43221110   0    011234


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hH-------HHHHhccCCCHHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SF-------NERFAGNLRTSEEGADT  285 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~-------~~~~~~~~~~~~e~A~~  285 (339)
                      ....| .+|++++.+.+.       .|++++.++||++.+++......      ..       .......+..++|+|+.
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (308)
T 1qyc_A          127 AKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTF  198 (308)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             chhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHH
Confidence            45688 999998887753       37889999999886543211100      00       00001235678999999


Q ss_pred             HHHHhccCCCCCCCcceeeCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      ++.++.++.  ..++.+++.+
T Consensus       199 ~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          199 TIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHhCcc--ccCeEEEEeC
Confidence            999987542  2344555543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.48  E-value=1.6e-12  Score=117.18  Aligned_cols=204  Identities=16%  Similarity=0.073  Sum_probs=127.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +||||||||.||++++++|.++|++|+++.|+++.              ..+   ..|     .+      ..+....+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TWD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EHH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ecc-----hh------hHhhccCCC
Confidence            58999999999999999999999999999998642              111   111     11      112345799


Q ss_pred             EEEEccccccCC--CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          143 VLVNNAGVLENN--RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       143 ~lInnAG~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      .+||.||.....  ...+....+..+++|+.++-.+.+.+...   ..+..++|+.||.+.+....... ..+..+....
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~~~~~-~~E~~p~~~~  129 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPSLTAE-YDEDSPGGDF  129 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCCSSCC-BCTTCCCSCS
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCCCCCc-ccccCCcccc
Confidence            999999854322  22455666778889998887776654321   11345577788877765432211 1122333344


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh-------------ccCCCHHHHHHHHH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------------GNLRTSEEGADTVL  287 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-------------~~~~~~~e~A~~v~  287 (339)
                      ..|+..|...+..     ......++++..+.||.|..|... ..........             ..+...+|+|++++
T Consensus       130 ~~~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~  203 (298)
T 4b4o_A          130 DFFSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGG-AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILT  203 (298)
T ss_dssp             SHHHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSH-HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHH
T ss_pred             chhHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCC-chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHH
Confidence            4566555544431     224467899999999999987421 1111111110             11345899999999


Q ss_pred             HHhccCCCCCCCcceeeCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +++..+.   .+|.|.+-++
T Consensus       204 ~~~~~~~---~~g~yn~~~~  220 (298)
T 4b4o_A          204 HALEANH---VHGVLNGVAP  220 (298)
T ss_dssp             HHHHCTT---CCEEEEESCS
T ss_pred             HHHhCCC---CCCeEEEECC
Confidence            9987543   3677766433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.42  E-value=1.1e-13  Score=124.46  Aligned_cols=107  Identities=17%  Similarity=0.222  Sum_probs=86.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||+++||||+||||+++++.|++.|++|++++|+.+++++..+++....   .+.++.+|+++.++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH-----
Confidence            3679999999999999999999999999999999999988888877775432   35667899999998877665     


Q ss_pred             CCCccEEEEccccccCC-C--CCCh-hhhhhhhhhhhhHHH
Q 019551          138 NKPVHVLVNNAGVLENN-R--LITS-EGFELNFAVNVLGTY  174 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-~--~~~~-~~~~~~~~vN~~~~~  174 (339)
                        .+|+||||||+.... .  ..+. +.++..+++|+.+++
T Consensus       188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence              479999999864322 1  1333 667788999999887

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.23  E-value=6.6e-12  Score=107.72  Aligned_cols=188  Identities=13%  Similarity=0.058  Sum_probs=104.9

Q ss_pred             ccCCCEEEEEcC----------------CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC
Q 019551           58 RIEGKNCVVTGA----------------NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL  121 (339)
Q Consensus        58 ~l~~k~vlITGa----------------s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  121 (339)
                      +++||+||||||                |||||+++|++|+++|++|++++++.. ++         .+ ..+  ..+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~-~g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TP-PFV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CC-TTE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cC-CCC--eEEcc
Confidence            378999999999                689999999999999999999988652 11         01 122  24688


Q ss_pred             CCHHHHHHHHHHHhcCCCCccEEEEccccccCCCC-CChhhhhhh--hhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELN--FAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       122 ~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~-~~~~~~~~~--~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ++.++   +++.+.+.++++|++|||||+....+. ...+.+.+.  -+.|+.-.+..+.-+++.+.+...++.+ .|+-
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VGF  147 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VVGF  147 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EEEE
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EEEc
Confidence            77655   445555667889999999998643222 222333330  0123333333445566666543122322 2221


Q ss_pred             ccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCc-ccCCCccCc-----chhHHHHH
Q 019551          199 GGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGW-AETPGVAKS-----MPSFNERF  272 (339)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~-v~T~~~~~~-----~~~~~~~~  272 (339)
                       ...                  .         +.+.+....++.++|+.+.+..|.. ..+.+..+.     ..... ..
T Consensus       148 -aaE------------------t---------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~-~~  198 (226)
T 1u7z_A          148 -AAE------------------T---------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG-DK  198 (226)
T ss_dssp             -EEE------------------S---------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTE-EE
T ss_pred             -chh------------------h---------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCC-cE
Confidence             111                  0         1244555566666787776666544 223332211     00000 00


Q ss_pred             hccCCCHHHHHHHHHHHhc
Q 019551          273 AGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s  291 (339)
                      .-...+.+++|+.++..+.
T Consensus       199 ~~~~~sK~~vA~~I~~~i~  217 (226)
T 1u7z_A          199 VLPLERKELLGQLLLDEIV  217 (226)
T ss_dssp             EEEEEEHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHHHHHHHHHHH
Confidence            1123578889888876653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.15  E-value=2.8e-11  Score=110.79  Aligned_cols=169  Identities=12%  Similarity=0.069  Sum_probs=108.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      .+++||||+|.||.+++..|+++|+       +|+++++++  ++.+....++...    .+.++ .|+.+.+++.+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHhC
Confidence            4699999999999999999999996       899999875  2333333334321    11112 36655444444332


Q ss_pred             HHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          133 RFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                             ..|++||.||.....    .+...+.+++|+.++..+++++...  . +..++++++|+......+.    ..
T Consensus        80 -------~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~--~-~~~~~vvv~snp~~~~~~~----~~  141 (327)
T 1y7t_A           80 -------DADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEV--A-KKDVKVLVVGNPANTNALI----AY  141 (327)
T ss_dssp             -------TCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHH--S-CTTCEEEECSSSHHHHHHH----HH
T ss_pred             -------CCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhh--c-CCCeEEEEeCCchhhhHHH----HH
Confidence                   689999999986532    1334567899999998888876543  0 1346888888754211100    00


Q ss_pred             cCC-CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcc
Q 019551          213 NSG-SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWA  256 (339)
Q Consensus       213 ~~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v  256 (339)
                      ... ++++...|+.+|...+.+...++..+   |+.+..++|.+|
T Consensus       142 ~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V  183 (327)
T 1y7t_A          142 KNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTV  183 (327)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEE
T ss_pred             HHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEE
Confidence            111 34555679999999999988888765   344444444443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=4e-10  Score=96.86  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           60 EGKNCVVTGA----------------NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        60 ~~k~vlITGa----------------s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      +||+||||||                ||++|.++|++|+++|++|++++|+.+. .       ...+ ..+..  .|+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~-------~~~~-~~~~~--~~v~s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-K-------PEPH-PNLSI--REITN   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-C-------CCCC-TTEEE--EECCS
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-c-------ccCC-CCeEE--EEHhH
Confidence            4899999999                7889999999999999999999997531 0       0001 12332  34444


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEccccccC
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnAG~~~~  153 (339)
                         +.++.+.+.+.++.+|++|||||+...
T Consensus        71 ---~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           71 ---TKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             ---HHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             ---HHHHHHHHHHhcCCCCEEEEcCccccc
Confidence               444555555566889999999997643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.89  E-value=6.6e-09  Score=79.65  Aligned_cols=73  Identities=16%  Similarity=0.074  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++++|+|+ |++|+++++.|.+.| ++|++++|++++++...        ...+..+.+|+++.+++.++++       
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~-------   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG-------   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc-------
Confidence            578999999 999999999999999 89999999987766543        1246678899999988777653       


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+++|
T Consensus        69 ~~d~vi~~~~   78 (118)
T 3ic5_A           69 GFDAVISAAP   78 (118)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6899999996

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.84  E-value=1.3e-11  Score=116.82  Aligned_cols=45  Identities=29%  Similarity=0.268  Sum_probs=39.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS  103 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~  103 (339)
                      ++.||+++|||++ +||+++|+.|+..|++|+++++++.+.++...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            3789999999997 99999999999999999999999877665543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.76  E-value=4.3e-08  Score=92.12  Aligned_cols=83  Identities=20%  Similarity=0.306  Sum_probs=71.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRG---ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G---~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++++|+|| ||||+++++.|++.|   .+|++++|+.+++++..+++.... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            47899999 899999999999998   499999999999998888776543 235788899999999999998875    


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                       ++|+||||+|..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             689999999854

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.76  E-value=6.3e-09  Score=84.69  Aligned_cols=78  Identities=10%  Similarity=0.041  Sum_probs=62.4

Q ss_pred             CchHHHHHHHHHHCCCEEEEEecCchhHHH---HHHHHHhhcCCccEEEEeccCCCH--HHHHHHHHHHhcCCCCccEEE
Q 019551           71 AGIGYATAEGLASRGATVYMVCRSKEKGET---ALSAIRSKTGNENVHLELCDLSSI--TEIKSFANRFSLKNKPVHVLV  145 (339)
Q Consensus        71 ~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~---~~~~l~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~id~lI  145 (339)
                      +-++.++++.|++.|++|++..|+.+....   ..+.+.+.  +.++..+++|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            347799999999999999999887654321   23333333  35688889999999  9999999999998999 9999


Q ss_pred             Eccccc
Q 019551          146 NNAGVL  151 (339)
Q Consensus       146 nnAG~~  151 (339)
                      ||||+.
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999974

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.71  E-value=5.8e-09  Score=101.24  Aligned_cols=96  Identities=24%  Similarity=0.255  Sum_probs=64.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc-C
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL-K  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~  137 (339)
                      +++|+++|||| ||+|+++|+.|++.|++|++++|+.+++++..+++.     ..+.    ++.+.          .+ .
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-----~~~~----~~~dl----------~~~~  421 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-----GKAL----SLTDL----------DNYH  421 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-----C-CE----ETTTT----------TTC-
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----Ccee----eHHHh----------hhcc
Confidence            67899999999 599999999999999999999999988877766541     1221    22221          11 1


Q ss_pred             CCCccEEEEccccccC-----CC--CCChhhhhhhhhhhhhHHH
Q 019551          138 NKPVHVLVNNAGVLEN-----NR--LITSEGFELNFAVNVLGTY  174 (339)
Q Consensus       138 ~~~id~lInnAG~~~~-----~~--~~~~~~~~~~~~vN~~~~~  174 (339)
                      ...+|+||||+|+...     ..  ..+.+.+..++++|+.+..
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            1358999999997432     11  1345678889999998763

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.66  E-value=5e-08  Score=82.19  Aligned_cols=103  Identities=21%  Similarity=0.272  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++||||++|||+++++.+...|++|++++|++++.+...    + .+ ...   .+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~-~g-~~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-LG-VEY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-TC-CSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-cC-CCE---EeeCCcHHHHHHHHHHhC--CC
Confidence            4799999999999999999999999999999999987654332    1 22 121   247776654444443322  23


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      .+|++|+|+|..         .               .+.+++.|+   ++|++|.+++..
T Consensus       107 ~~D~vi~~~g~~---------~---------------~~~~~~~l~---~~G~~v~~g~~~  140 (198)
T 1pqw_A          107 GVDVVLNSLAGE---------A---------------IQRGVQILA---PGGRFIELGKKD  140 (198)
T ss_dssp             CEEEEEECCCTH---------H---------------HHHHHHTEE---EEEEEEECSCGG
T ss_pred             CCeEEEECCchH---------H---------------HHHHHHHhc---cCCEEEEEcCCC
Confidence            699999999721         0               233444443   358999998754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=1.8e-08  Score=90.26  Aligned_cols=81  Identities=26%  Similarity=0.333  Sum_probs=61.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++|||++ |+|+++|+.|++.| +|++++|+.+++++..+++....... . .+.+|+++.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HHh
Confidence            3678999999997 99999999999999 99999999988888877765432100 0 112344441          345


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                      .+.+|+||||+|...
T Consensus       191 ~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 LDGVDIIINATPIGM  205 (287)
T ss_dssp             CTTCCEEEECSCTTC
T ss_pred             hCCCCEEEECCCCCC
Confidence            678999999999765

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.65  E-value=6.4e-08  Score=88.46  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++||||++|||.++++.+...|++|++++|++++++.+ +++    + ..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~----g-~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI----G-FD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----T-CS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc----C-Cc---EEEecCCHHHHHHHHHHHhC--C
Confidence            489999999999999999999999999999999998776655 333    2 12   22477764455555555443  5


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            7999999998

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.60  E-value=7.7e-08  Score=91.50  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++|+++||| +||+|+++++.|++.|++|++++|+.+++++..+    ..+  .+..+.+|++|.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~~--~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GVQ--HSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TCT--TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hcC--CceEEEeecCCHHHHHHHHc-------
Confidence            468999998 7999999999999999999999999876554332    222  36678899999988877664       


Q ss_pred             CccEEEEccccc
Q 019551          140 PVHVLVNNAGVL  151 (339)
Q Consensus       140 ~id~lInnAG~~  151 (339)
                      .+|+||||++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999864

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.59  E-value=7.4e-08  Score=89.39  Aligned_cols=107  Identities=16%  Similarity=0.194  Sum_probs=74.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+.+++++|+|+ |+||+++++.+...|++|++++|++++++...+.+    + ..   +.+|.++.+++.+.+.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g-~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----G-GR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----T-TS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----C-ce---EEEecCCHHHHHHHHh-----
Confidence            478899999999 99999999999999999999999988766554322    2 22   3457778887777664     


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                        ..|++|+|+|......                 +..+.+..++.|+   ++++||++++..
T Consensus       229 --~~DvVi~~~g~~~~~~-----------------~~li~~~~l~~mk---~gg~iV~v~~~~  269 (369)
T 2eez_A          229 --HADLLIGAVLVPGAKA-----------------PKLVTRDMLSLMK---EGAVIVDVAVDQ  269 (369)
T ss_dssp             --HCSEEEECCC------------------------CCSCHHHHTTSC---TTCEEEECC---
T ss_pred             --CCCEEEECCCCCcccc-----------------chhHHHHHHHhhc---CCCEEEEEecCC
Confidence              5899999998653110                 1123345555564   468999998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.57  E-value=3.7e-07  Score=82.38  Aligned_cols=83  Identities=24%  Similarity=0.320  Sum_probs=65.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS---KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++....+   +.+...++.+.+++.+.+. 
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~---~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD---CKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHHH-
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC---CceEEeccchHHHHHhhhc-
Confidence            368999999998 7999999999999999 89999999   8888888888776543   2333456677666655444 


Q ss_pred             HhcCCCCccEEEEccccc
Q 019551          134 FSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~  151 (339)
                            ..|+|||+....
T Consensus       226 ------~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ------ESVIFTNATGVG  237 (315)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------CCCEEEECccCC
Confidence                  689999987543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.46  E-value=2.4e-07  Score=82.21  Aligned_cols=78  Identities=15%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++... +  .+.  ..|+   +++       .+ 
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~--~~~--~~~~---~~~-------~~-  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G--SIQ--ALSM---DEL-------EG-  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S--SEE--ECCS---GGG-------TT-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C--Cee--EecH---HHh-------cc-
Confidence            367899999998 79999999999999999999999999888777666432 1  221  2333   221       11 


Q ss_pred             CCCccEEEEccccccC
Q 019551          138 NKPVHVLVNNAGVLEN  153 (339)
Q Consensus       138 ~~~id~lInnAG~~~~  153 (339)
                       +..|+||||+|....
T Consensus       179 -~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          179 -HEFDLIINATSSGIS  193 (271)
T ss_dssp             -CCCSEEEECCSCGGG
T ss_pred             -CCCCEEEECCCCCCC
Confidence             589999999997653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=5.3e-07  Score=82.80  Aligned_cols=80  Identities=19%  Similarity=0.209  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+++||+||+||||+++++.+...|++|++++|++++++.+. ++    +. .   ..+|+++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~----g~-~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI----GG-E---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT----TC-C---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc----CC-c---eEEecCccHhHHHHHHHHhCC--
Confidence            4899999999999999999999999999999999988764332 22    22 2   224777656666666665443  


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.46  E-value=3.7e-07  Score=87.02  Aligned_cols=82  Identities=15%  Similarity=0.230  Sum_probs=63.0

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +..++++++++|+|| ||+|+++++.|++. |++|++++|+.+++++..++    .   .+..+.+|+.|.+++.++++ 
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~---~~~~~~~D~~d~~~l~~~l~-   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S---GSKAISLDVTDDSALDKVLA-   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G---TCEEEECCTTCHHHHHHHHH-
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c---CCcEEEEecCCHHHHHHHHc-
Confidence            334577899999998 99999999999998 78999999998876655432    1   24567789999988877665 


Q ss_pred             HhcCCCCccEEEEccccc
Q 019551          134 FSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~  151 (339)
                            .+|+||||++..
T Consensus        88 ------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ------DNDVVISLIPYT   99 (467)
T ss_dssp             ------TSSEEEECSCGG
T ss_pred             ------CCCEEEECCchh
Confidence                  689999999865

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.41  E-value=4.3e-07  Score=83.26  Aligned_cols=80  Identities=19%  Similarity=0.228  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+.+++    +. ..   .+|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g~-~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----GF-DD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----CC-SE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC-ce---EEecCCHHHHHHHHHHHhC--C
Confidence            4899999999999999999999999999999999987766543222    22 21   2366654444444554432  5


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.40  E-value=1e-06  Score=80.42  Aligned_cols=80  Identities=24%  Similarity=0.254  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+.+ +    +. ..   .+|.++.+..+.+.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~----g~-~~---~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L----GC-HH---TINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H----TC-SE---EEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CC-CE---EEECCCHHHHHHHHHHhC--CC
Confidence            47899999999999999999999999999999999877665432 2    22 21   246666554444443322  23


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.39  E-value=8.1e-07  Score=80.84  Aligned_cols=79  Identities=16%  Similarity=0.255  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+.+ +    +. ..   .+|.++.+..+.+.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~----g~-~~---~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GA-WQ---VINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TC-SE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CC-CE---EEECCCccHHHHHHHHhC--CC
Confidence            48999999999999999999999999999999999877665432 2    21 21   246666555554444322  23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.34  E-value=1.6e-06  Score=77.27  Aligned_cols=80  Identities=21%  Similarity=0.284  Sum_probs=61.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.+++++..+++...++...+.  ..++.+   +.+.+.    
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh----
Confidence            467999999998 8999999999999999 79999999999999888887665433333  334333   333333    


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                         ..|+|||+...
T Consensus       194 ---~~DiVInaTp~  204 (283)
T 3jyo_A          194 ---AADGVVNATPM  204 (283)
T ss_dssp             ---HSSEEEECSST
T ss_pred             ---cCCEEEECCCC
Confidence               47999999754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.33  E-value=1.6e-06  Score=79.92  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+ +++    +. .   ..+|..+.+..+++.+...  .+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----g~-~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL----GA-A---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TC-S---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CC-c---EEEecCChHHHHHHHHHhc--CC
Confidence            489999999999999999999999999999999998876655 332    21 2   1246666544444333221  23


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.33  E-value=1.9e-06  Score=68.25  Aligned_cols=75  Identities=20%  Similarity=0.216  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++++|+|+ |.+|+++|+.|.++|++|+++++++++.+...+    .    .+.++.+|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC------Ccc
Confidence            3578999998 779999999999999999999999887655432    1    356778999999877653      224


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      ..|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899998775

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.33  E-value=1.4e-06  Score=79.61  Aligned_cols=80  Identities=19%  Similarity=0.266  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+.+++    +. ..   ..|..+.+..+.+.+ ..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~----g~-~~---~~~~~~~~~~~~~~~-~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL----GF-DG---AIDYKNEDLAAGLKR-EC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----CC-SE---EEETTTSCHHHHHHH-HC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC-CE---EEECCCHHHHHHHHH-hc--CC
Confidence            4899999999999999999999999999999999988766553332    22 21   236665443333333 22  35


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.32  E-value=1.1e-06  Score=80.92  Aligned_cols=77  Identities=22%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++++||||+||||.++++.+...|+ +|+++++++++++.+.+++    +. .   ..+|..+.+..+. +.+...  +.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g~-~---~~~d~~~~~~~~~-~~~~~~--~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----GF-D---AAINYKKDNVAEQ-LRESCP--AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----CC-S---EEEETTTSCHHHH-HHHHCT--TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CC-c---eEEecCchHHHHH-HHHhcC--CC
Confidence            8999999999999999999999999 9999999987765544322    22 2   2246666433333 333222  27


Q ss_pred             ccEEEEccc
Q 019551          141 VHVLVNNAG  149 (339)
Q Consensus       141 id~lInnAG  149 (339)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.29  E-value=2.3e-06  Score=78.71  Aligned_cols=80  Identities=16%  Similarity=0.294  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+ +++    +. .   ..+|..+.+..+++.+..  ...
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga-~---~~~d~~~~~~~~~~~~~~--~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN----GA-H---EVFNHREVNYIDKIKKYV--GEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC-S---EEEETTSTTHHHHHHHHH--CTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc----CC-C---EEEeCCCchHHHHHHHHc--CCC
Confidence            488999999999999999999999999999999998876633 222    22 2   124666655444433322  123


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       239 ~~D~vi~~~G~  249 (351)
T 1yb5_A          239 GIDIIIEMLAN  249 (351)
T ss_dssp             CEEEEEESCHH
T ss_pred             CcEEEEECCCh
Confidence            79999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.27  E-value=8.2e-07  Score=70.21  Aligned_cols=77  Identities=21%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++++++|+|+ |++|+.+++.|.+.|++|++++|++++.+..    .+.    ....+.+|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~----~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY----ATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT----CSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh----CCEEEEeCCCCHHHHHhc------CC
Confidence            45778999998 9999999999999999999999987654322    111    234567899887655432      12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ...|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            468999999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.27  E-value=4.4e-06  Score=75.25  Aligned_cols=83  Identities=22%  Similarity=0.269  Sum_probs=61.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS---KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ++.+|+++|+|+ ||.|++++..|++.|+ +|++++|+   .++++++.+++....+   ..+...++.+.+...+.+. 
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~---~~v~~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD---CVVTVTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHHH-
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC---cceEEechHhhhhhHhhcc-
Confidence            367999999998 8999999999999999 89999999   7778888777766543   2233345555433333333 


Q ss_pred             HhcCCCCccEEEEccccc
Q 019551          134 FSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~  151 (339)
                            ..|+|||+.+..
T Consensus       220 ------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ------SADILTNGTKVG  231 (312)
T ss_dssp             ------HCSEEEECSSTT
T ss_pred             ------CceEEEECCcCC
Confidence                  479999987554

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.21  E-value=4.2e-06  Score=76.73  Aligned_cols=80  Identities=23%  Similarity=0.259  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++||||+||||.++++.+... |++|+++++++++++.+. ++    +. ..   .+|..+.+..+++ .++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~----g~-~~---~~~~~~~~~~~~~-~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA----GA-DY---VINASMQDPLAEI-RRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH----TC-SE---EEETTTSCHHHHH-HHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CC-CE---EecCCCccHHHHH-HHHhcC-
Confidence            4789999999999999999999998 999999999988766542 22    22 22   2355554433332 222221 


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            489999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.19  E-value=1.1e-05  Score=73.43  Aligned_cols=157  Identities=11%  Similarity=0.014  Sum_probs=97.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecC----chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRS----KEKGETALSAIRSKTGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      .+++||||+|.+|..++..|+..|.       .|++++++    +++++....++....-  ...   .|+...++..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~~---~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PLL---AGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TTE---EEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--ccc---CcEEEecCcHHH
Confidence            4799999999999999999999885       79999998    5556655555654210  111   233333333333


Q ss_pred             HHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      ++       ..|++|+.||...... .+   -.+.+..|+.....+++.+.    +.. ..++++++|........    
T Consensus        81 l~-------~aD~Vi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~----~~~~p~a~ii~~SNPv~~~t~----  141 (329)
T 1b8p_A           81 FK-------DADVALLVGARPRGPG-ME---RKDLLEANAQIFTVQGKAID----AVASRNIKVLVVGNPANTNAY----  141 (329)
T ss_dssp             TT-------TCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHHH----HHSCTTCEEEECSSSHHHHHH----
T ss_pred             hC-------CCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccCchHHHHH----
Confidence            32       6899999999765321 12   23457788777766666554    432 46789999874422110    


Q ss_pred             ccccCC-CCcchHHHHHhHHHHHHHHHHHHHHHc
Q 019551          210 LEFNSG-SFDGMEQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       210 ~~~~~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                      ...... ++|..-.|+.++.--..+...++..+.
T Consensus       142 ~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          142 IAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            000001 344444577776666667777777765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.18  E-value=2.6e-06  Score=80.96  Aligned_cols=109  Identities=17%  Similarity=0.211  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEe--ccCC---------CHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL--CDLS---------SITEIK  128 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~Dl~---------~~~~v~  128 (339)
                      .|++|+|+||+||||.++++.+...|++|+++++++++++.+ ++    .+... .+..  .|+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~----lGa~~-~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RA----LGCDL-VINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----TTCCC-EEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh----cCCCE-EEecccccccccccccccccchhhh
Confidence            489999999999999999999999999999999988776644 22    22222 2221  1221         123444


Q ss_pred             HHHHHHhcC-CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccc
Q 019551          129 SFANRFSLK-NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGM  201 (339)
Q Consensus       129 ~~~~~~~~~-~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~  201 (339)
                      .+.+++.+. .+.+|++|+|+|..         .               .+..++.++   .+|++|.+++..+
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~~---------~---------------~~~~~~~l~---~~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGRV---------T---------------FGLSVIVAR---RGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCHH---------H---------------HHHHHHHSC---TTCEEEESCCTTC
T ss_pred             HHHHHHHHHhCCCceEEEECCCch---------H---------------HHHHHHHHh---cCCEEEEEecCCC
Confidence            445555443 34699999999831         0               133344443   4699999987544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.15  E-value=8.3e-06  Score=74.99  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+||||.++++.+...|++|+++++++++++.+.+ +    +. ..   ..|..+.+..+.+.+ ..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga-~~---~~~~~~~~~~~~~~~-~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L----GA-KR---GINYRSEDFAAVIKA-ET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H----TC-SE---EEETTTSCHHHHHHH-HH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CC-CE---EEeCCchHHHHHHHH-Hh--CC
Confidence            48899999999999999999999999999999999887765432 2    22 21   135555443333333 32  45


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.11  E-value=3.3e-05  Score=70.19  Aligned_cols=115  Identities=17%  Similarity=0.156  Sum_probs=73.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .+++||||+|.+|..++..|+++|  ..|++++++++  +....++........+..    +.+.++..+.++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            479999999999999999999998  78999998876  333334443211112222    223445544443       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVS  197 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vs  197 (339)
                      ..|++|++||...... .+   -...+.+|+.+...+.+.+..    ....+.|+++|
T Consensus        76 gaDvVi~~ag~~~~~g-~~---r~dl~~~N~~~~~~i~~~i~~----~~p~~~viv~S  125 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG-MT---RDDLFKINAGIVKTLCEGIAK----CCPRAIVNLIS  125 (326)
T ss_dssp             TCSEEEECCCCCCCSS-CC---CSHHHHHHHHHHHHHHHHHHH----HCTTSEEEECC
T ss_pred             CCCEEEEcCCcCCCCC-CC---HHHHHHHHHHHHHHHHHHHHh----hCCCeEEEEEC
Confidence            6899999999754322 11   234477888877777766544    32445555544

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.09  E-value=1.3e-05  Score=73.36  Aligned_cols=79  Identities=23%  Similarity=0.267  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+. ++    +. ..   .+|.++.+-.+ .+.+.. ...
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----ga-~~---~~d~~~~~~~~-~~~~~~-~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL----GA-DE---TVNYTHPDWPK-EVRRLT-GGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----TC-SE---EEETTSTTHHH-HHHHHT-TTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----CC-CE---EEcCCcccHHH-HHHHHh-CCC
Confidence            4789999999999999999999999999999999988766543 22    22 21   24666643222 233222 124


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.07  E-value=5.7e-06  Score=76.47  Aligned_cols=76  Identities=17%  Similarity=0.275  Sum_probs=53.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc---hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK---EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .++|++|+|+|| ||||..+++.+...|++|+++++++   ++++.+ +++    +   ...+  | .+ +-.+++ .+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~----g---a~~v--~-~~-~~~~~~-~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET----K---TNYY--N-SS-NGYDKL-KD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH----T---CEEE--E-CT-TCSHHH-HH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh----C---Ccee--c-hH-HHHHHH-HH-
Confidence            366999999999 9999999999999999999999998   665432 222    2   2222  4 44 212222 22 


Q ss_pred             hcCCCCccEEEEcccc
Q 019551          135 SLKNKPVHVLVNNAGV  150 (339)
Q Consensus       135 ~~~~~~id~lInnAG~  150 (339)
                      ..  +.+|++|+|+|.
T Consensus       243 ~~--~~~d~vid~~g~  256 (366)
T 2cdc_A          243 SV--GKFDVIIDATGA  256 (366)
T ss_dssp             HH--CCEEEEEECCCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            12  579999999985

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.05  E-value=1.6e-05  Score=70.29  Aligned_cols=77  Identities=14%  Similarity=0.210  Sum_probs=57.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++... +  .+..  .|+   +++       .+ 
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-~--~~~~--~~~---~~~-------~~-  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G--NIQA--VSM---DSI-------PL-  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S--CEEE--EEG---GGC-------CC-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-C--CeEE--eeH---HHh-------cc-
Confidence            367899999998 89999999999999999999999999888887776432 1  2222  232   111       01 


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                       +..|+||||++...
T Consensus       179 -~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 -QTYDLVINATSAGL  192 (272)
T ss_dssp             -SCCSEEEECCCC--
T ss_pred             -CCCCEEEECCCCCC
Confidence             47999999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.04  E-value=3.1e-05  Score=70.93  Aligned_cols=79  Identities=10%  Similarity=0.026  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++++|+||+|+||.+.++.+...|++|+++++++++++.+. ++    +. ...   .|..+.+-.+.+.+....  ..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga-~~~---~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI----GA-AHV---LNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH----TC-SEE---EETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC-CEE---EECCcHHHHHHHHHHhcC--CC
Confidence            489999999999999999999899999999999998876553 22    22 211   344443333322222111  26


Q ss_pred             ccEEEEcccc
Q 019551          141 VHVLVNNAGV  150 (339)
Q Consensus       141 id~lInnAG~  150 (339)
                      +|++|+|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.04  E-value=1.8e-05  Score=69.12  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=67.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|.++|+.|+..|. +|.+++++.                   .+.+.+.+.+.+.++..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            477899999997 7999999999999997 899999997                   7888888888888777777777


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEccc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG  149 (339)
                      ..++++ +.+.++++       ..|++|++..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            777753 44444443       6899998863

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.03  E-value=1.4e-05  Score=72.47  Aligned_cols=80  Identities=23%  Similarity=0.212  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+|+||.++++.+...|++|+++++++++++.+. ++    +. ..   ..|..+.+..+.+.+..  ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga-~~---~~~~~~~~~~~~~~~~~--~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL----GA-WE---TIDYSHEDVAKRVLELT--DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH----TC-SE---EEETTTSCHHHHHHHHT--TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC-CE---EEeCCCccHHHHHHHHh--CCC
Confidence            4899999999999999999999999999999999988766443 22    22 21   13555544333333222  123


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.02  E-value=1.2e-05  Score=73.19  Aligned_cols=80  Identities=21%  Similarity=0.272  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+||||.++++.+...|++|+++++++++++.+ +++    +. ..   ..|..+.+..+.+.+..  ...
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga-~~---~~~~~~~~~~~~~~~~~--~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY----GA-EY---LINASKEDILRQVLKFT--NGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC-SE---EEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CC-cE---EEeCCCchHHHHHHHHh--CCC
Confidence            489999999999999999999999999999999998876633 222    22 22   13555544333332221  123


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.02  E-value=1.6e-05  Score=72.63  Aligned_cols=80  Identities=15%  Similarity=0.163  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+++||.++++.+...|++|+++++++++++.+.+ +    +. ...   .|..+.+..+.+.+ .. ...
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----ga-~~~---~~~~~~~~~~~~~~-~~-~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L----GA-AYV---IDTSTAPLYETVME-LT-NGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TC-SEE---EETTTSCHHHHHHH-HT-TTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C----CC-cEE---EeCCcccHHHHHHH-Hh-CCC
Confidence            48899999999999999999988899999999999988765543 2    22 221   35555433333322 21 123


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.98  E-value=1e-05  Score=72.58  Aligned_cols=77  Identities=23%  Similarity=0.284  Sum_probs=56.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....+         ++.+.+++.+       .
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~---------~~~~~~~~~~-------~  201 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS---------AYFSLAEAET-------R  201 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC---------CEECHHHHHH-------T
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC---------ceeeHHHHHh-------h
Confidence            67899999998 7999999999999998 999999999888777665422110         1112223222       2


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                      ....|+|||+++...
T Consensus       202 ~~~aDivIn~t~~~~  216 (297)
T 2egg_A          202 LAEYDIIINTTSVGM  216 (297)
T ss_dssp             GGGCSEEEECSCTTC
T ss_pred             hccCCEEEECCCCCC
Confidence            246899999998654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.95  E-value=4.5e-05  Score=61.18  Aligned_cols=77  Identities=14%  Similarity=0.171  Sum_probs=56.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.++|.|+ |.+|+.+++.|.+.|++|+++++++ ++.+...+..    + ..+.++.+|.++++.++++      ...
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~-~~~~~i~gd~~~~~~l~~a------~i~   70 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----G-DNADVIPGDSNDSSVLKKA------GID   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----C-TTCEEEESCTTSHHHHHHH------TTT
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----c-CCCeEEEcCCCCHHHHHHc------Chh
Confidence            467888886 9999999999999999999999984 4443333221    1 2467888999998876554      113


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            6788887764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.94  E-value=3.4e-05  Score=60.41  Aligned_cols=75  Identities=16%  Similarity=0.310  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|+++..+...+    ..   .+.++..|.++.+.+.+.      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~---~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI---DALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC---SSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc---CcEEEEcCCCCHHHHHHc------Cccc
Confidence            457899987 999999999999999999999999876554432    21   244567888887665321      1246


Q ss_pred             ccEEEEccc
Q 019551          141 VHVLVNNAG  149 (339)
Q Consensus       141 id~lInnAG  149 (339)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.93  E-value=4.3e-05  Score=69.86  Aligned_cols=79  Identities=24%  Similarity=0.304  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+||||.++++.+...|++|+++++++++++.+.+ +    +. .. ++  |..  +++.+.+.+.. ...
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~----ga-~~-v~--~~~--~~~~~~v~~~~-~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V----GA-DI-VL--PLE--EGWAKAVREAT-GGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H----TC-SE-EE--ESS--TTHHHHHHHHT-TTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CC-cE-Ee--cCc--hhHHHHHHHHh-CCC
Confidence            48999999999999999999999999999999999888754432 2    22 21 22  333  22333233222 122


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.93  E-value=6.9e-05  Score=66.68  Aligned_cols=90  Identities=21%  Similarity=0.349  Sum_probs=73.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCccEEEEe
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK------------------EKGETALSAIRSKTGNENVHLEL  118 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  118 (339)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                  .|.+.+.+.+.+.++..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            367889999998 8999999999999997 899999876                  78888889999888888889898


Q ss_pred             ccCCCHHHHHHHHHHHhcC----CCCccEEEEcc
Q 019551          119 CDLSSITEIKSFANRFSLK----NKPVHVLVNNA  148 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~----~~~id~lInnA  148 (339)
                      .++++.+.++.+++.+...    ....|+||.+.
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            8998877777776554321    13689998765

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.91  E-value=2.9e-05  Score=71.74  Aligned_cols=71  Identities=20%  Similarity=0.184  Sum_probs=57.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +|+|.|| |++|+.+|+.|++ .++|.+.+|+.+++++..         ..+..+.+|+.|.+++.++++       ..|
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~-------~~D   79 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMK-------EFE   79 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHh-------CCC
Confidence            6899998 9999999999865 589999999988766542         234567899999999888775       679


Q ss_pred             EEEEccccc
Q 019551          143 VLVNNAGVL  151 (339)
Q Consensus       143 ~lInnAG~~  151 (339)
                      +|||+++..
T Consensus        80 vVi~~~p~~   88 (365)
T 3abi_A           80 LVIGALPGF   88 (365)
T ss_dssp             EEEECCCGG
T ss_pred             EEEEecCCc
Confidence            999998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.86  E-value=5e-05  Score=67.09  Aligned_cols=75  Identities=11%  Similarity=0.197  Sum_probs=56.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++..    ..+....  +.+..          .
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~~--~~~l~----------~  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRISR--YEALE----------G  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEEC--SGGGT----------T
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEee--HHHhc----------c
Confidence            367999999998 7999999999999996 999999999998888777643    1233332  22211          1


Q ss_pred             CCCCccEEEEccccc
Q 019551          137 KNKPVHVLVNNAGVL  151 (339)
Q Consensus       137 ~~~~id~lInnAG~~  151 (339)
                        ...|+|||+....
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              3689999986543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.86  E-value=5.9e-05  Score=69.52  Aligned_cols=78  Identities=19%  Similarity=0.172  Sum_probs=57.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.+++|+|+|+ ||+|+++++.+...|++|++++|++++++.+.+...     ..+..   +..+.+++.+.+.      
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~------  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA------  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHc------
Confidence            56799999999 999999999999999999999999988776654332     12211   2234444444332      


Q ss_pred             CCccEEEEcccccc
Q 019551          139 KPVHVLVNNAGVLE  152 (339)
Q Consensus       139 ~~id~lInnAG~~~  152 (339)
                       ..|++||++|...
T Consensus       230 -~~DvVI~~~~~~~  242 (361)
T 1pjc_A          230 -EADLLIGAVLVPG  242 (361)
T ss_dssp             -TCSEEEECCCCTT
T ss_pred             -CCCEEEECCCcCC
Confidence             6899999998643

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.85  E-value=4.4e-05  Score=72.66  Aligned_cols=85  Identities=22%  Similarity=0.350  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEe--cc--------CCCHHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL--CD--------LSSITEIKS  129 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D--------l~~~~~v~~  129 (339)
                      .|++|+|+||+|+||...++.+...|++|+++++++++++.+ +++    +. ...+..  .|        ..+.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l----Ga-~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM----GA-EAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH----TC-CEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh----CC-cEEEecCcCcccccccccccchHHHHH
Confidence            488999999999999999999999999999999988776644 222    22 211111  11        234566666


Q ss_pred             HHHHHhcCC--CCccEEEEcccc
Q 019551          130 FANRFSLKN--KPVHVLVNNAGV  150 (339)
Q Consensus       130 ~~~~~~~~~--~~id~lInnAG~  150 (339)
                      +.+.+.+..  ..+|++|+++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            666665532  479999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.85  E-value=8.2e-05  Score=66.00  Aligned_cols=75  Identities=15%  Similarity=0.275  Sum_probs=57.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++....   .+....  +.+   +         
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~--~~~---l---------  184 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQA--FEQ---L---------  184 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEE--GGG---C---------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEee--HHH---h---------
Confidence            367999999998 7999999999999996 99999999999888888775431   233332  211   1         


Q ss_pred             CCCCccEEEEccccc
Q 019551          137 KNKPVHVLVNNAGVL  151 (339)
Q Consensus       137 ~~~~id~lInnAG~~  151 (339)
                       ....|+|||+.+..
T Consensus       185 -~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 -KQSYDVIINSTSAS  198 (281)
T ss_dssp             -CSCEEEEEECSCCC
T ss_pred             -cCCCCEEEEcCcCC
Confidence             03689999987654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.85  E-value=1.5e-05  Score=64.14  Aligned_cols=81  Identities=16%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |+.+..+++++|.|+ |.+|..+++.|.+.|++|++++|++++++..    ...   .....+..|..+.+.+.+.    
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~~---~g~~~~~~d~~~~~~l~~~----   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NSE---FSGFTVVGDAAEFETLKEC----   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CTT---CCSEEEESCTTSHHHHHTT----
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----Hhc---CCCcEEEecCCCHHHHHHc----
Confidence            445567899999996 9999999999999999999999998765422    101   1244566788876544321    


Q ss_pred             hcCCCCccEEEEccc
Q 019551          135 SLKNKPVHVLVNNAG  149 (339)
Q Consensus       135 ~~~~~~id~lInnAG  149 (339)
                        .....|++|.+.+
T Consensus        81 --~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 --GMEKADMVFAFTN   93 (155)
T ss_dssp             --TGGGCSEEEECSS
T ss_pred             --CcccCCEEEEEeC
Confidence              1235799998876

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.81  E-value=0.0002  Score=64.54  Aligned_cols=116  Identities=16%  Similarity=0.154  Sum_probs=71.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCR--SKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r--~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++||||+|++|..++..|+..|.  .++++++  ++++++....++....+  +.++.+...|  |  ++.+.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHHH------
Confidence            589999999999999999999885  6899998  66555544444433211  1122222211  0  11111      


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                       +...|++||.||...... .   .-...+..|+.+...+++.+.    +.. .+.|+++|.
T Consensus        72 -l~gaD~Vi~~Ag~~~~~g-~---~r~dl~~~N~~i~~~i~~~i~----~~~-~~~vlv~SN  123 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKEG-M---SRMDLAKTNAKIVGKYAKKIA----EIC-DTKIFVITN  123 (313)
T ss_dssp             -GTTCSEEEECCSCCCCTT-C---CHHHHHHHHHHHHHHHHHHHH----HHC-CCEEEECSS
T ss_pred             -hCCCCEEEECCCCCCCCC-C---cHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecC
Confidence             237899999999764322 1   223457888887777776654    443 455665554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.80  E-value=2.4e-05  Score=64.77  Aligned_cols=78  Identities=14%  Similarity=0.128  Sum_probs=57.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.+++++|.|+ |.+|..+|+.|.+. |++|+++++++++.+...+    .    .+..+.+|.++.+.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhc-----c
Confidence            466778899985 99999999999999 9999999999877654332    1    244566899887654432     0


Q ss_pred             CCCCccEEEEccc
Q 019551          137 KNKPVHVLVNNAG  149 (339)
Q Consensus       137 ~~~~id~lInnAG  149 (339)
                      .....|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1346899998765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.79  E-value=0.00023  Score=63.92  Aligned_cols=114  Identities=18%  Similarity=0.135  Sum_probs=72.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCR--SKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||||+|.+|.+++..|+..|.  .++++++  ++++++....++..... ..++.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999999885  6999999  77666554455543311 12233332 2  2222           


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      +...|++|+.||...... .+   -...+..|+.....+.+.+    .+....+.|+++|.
T Consensus        68 ~~~aDvVi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SN  120 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG-QT---RIDLAGDNAPIMEDIQSSL----DEHNDDYISLTTSN  120 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHH----HTTCSCCEEEECCS
T ss_pred             hCCCCEEEEcCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCC
Confidence            136899999999754322 12   2344778877776666654    44434555665543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.78  E-value=4.9e-05  Score=70.07  Aligned_cols=78  Identities=23%  Similarity=0.256  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+|+||..+++.+...|++|+++++++++++.+.+     .+. .. +  .|..+.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----~Ga-~~-~--~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-----LGC-DR-P--INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TTC-SE-E--EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----cCC-cE-E--EecCChh-HHHHHHHhc--CC
Confidence            48899999999999999999999999999999999877654432     222 21 1  2444332 333333332  24


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.75  E-value=0.0001  Score=67.16  Aligned_cols=101  Identities=19%  Similarity=0.141  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+|| ||||..+++.+...|++|++++|++++++.+. +    .+. ..   .+|..+.+ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----lGa-~~---~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E----LGA-DL---VVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H----TTC-SE---EECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H----CCC-CE---EecCCCcc-HHHHHHHHh---C
Confidence            4789999999 88999999999999999999999988766442 2    222 21   24666543 222233322   4


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      .+|++|+++|...                       .++.+++.++   ++|+++.+++..
T Consensus       230 ~~d~vid~~g~~~-----------------------~~~~~~~~l~---~~G~~v~~g~~~  264 (339)
T 1rjw_A          230 GVHAAVVTAVSKP-----------------------AFQSAYNSIR---RGGACVLVGLPP  264 (339)
T ss_dssp             SEEEEEESSCCHH-----------------------HHHHHHHHEE---EEEEEEECCCCS
T ss_pred             CCCEEEECCCCHH-----------------------HHHHHHHHhh---cCCEEEEecccC
Confidence            7999999998421                       2244444443   358999887643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.74  E-value=0.00012  Score=67.01  Aligned_cols=78  Identities=15%  Similarity=0.156  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+|+||...++.+...|++|+++++++++++.+.+ +    +...+    .|..+  ++.+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v----i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M----GADIV----LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H----TCSEE----ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CCcEE----EECCc--cHHHHHHHh--CCC
Confidence            58999999999999999999999999999999999887665433 2    22211    23332  233333333  335


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.73  E-value=7.6e-05  Score=69.19  Aligned_cols=79  Identities=23%  Similarity=0.233  Sum_probs=59.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+.|++++|+|+ |+||+++++.+...|++|++.+|++++++.+.+.+    + ..+.   ++..+.+++.+.+.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g-~~~~---~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----C-GRIH---TRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----T-TSSE---EEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----C-CeeE---eccCCHHHHHHHHc-----
Confidence            478999999999 99999999999999999999999988766554332    2 1221   23445556655543     


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                        ..|++|++++...
T Consensus       231 --~aDvVi~~~~~p~  243 (377)
T 2vhw_A          231 --RADLVIGAVLVPG  243 (377)
T ss_dssp             --HCSEEEECCCCTT
T ss_pred             --CCCEEEECCCcCC
Confidence              5899999998654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.72  E-value=0.00011  Score=67.10  Aligned_cols=76  Identities=18%  Similarity=0.364  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+|+||.++++.+...|++|+++ +++++++.+ +++    + ...    +| .+.+ +.+.+.+.. ...
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l----G-a~~----i~-~~~~-~~~~~~~~~-~~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL----G-ATP----ID-ASRE-PEDYAAEHT-AGQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH----T-SEE----EE-TTSC-HHHHHHHHH-TTS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc----C-CCE----ec-cCCC-HHHHHHHHh-cCC
Confidence            48899999999999999999999999999999 777765533 222    2 222    34 3322 333333322 223


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+|+|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.64  E-value=0.0001  Score=66.05  Aligned_cols=74  Identities=19%  Similarity=0.271  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+|++|..+++.+...|++|+++++++++++.+. ++    +. ..   ..|..+.+++   .+.+    +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----ga-~~---~~~~~~~~~~---~~~~----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL----GA-EE---AATYAEVPER---AKAW----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT----TC-SE---EEEGGGHHHH---HHHT----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----CC-CE---EEECCcchhH---HHHh----c
Confidence            4789999999999999999999999999999999988766542 22    22 21   1344441222   2222    4


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+ +|.
T Consensus       189 ~~d~vid-~g~  198 (302)
T 1iz0_A          189 GLDLVLE-VRG  198 (302)
T ss_dssp             SEEEEEE-CSC
T ss_pred             CceEEEE-CCH
Confidence            7999999 874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.64  E-value=0.00026  Score=64.72  Aligned_cols=103  Identities=19%  Similarity=0.214  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|+|| |+||..+++.+...|+ +|+++++++++++.+. ++    +...    ..|..+.+ +.+.+.++. ..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~----Ga~~----~~~~~~~~-~~~~v~~~~-~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV----GADY----VINPFEED-VVKEVMDIT-DG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH----TCSE----EECTTTSC-HHHHHHHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CCCE----EECCCCcC-HHHHHHHHc-CC
Confidence            5789999999 9999999999999999 9999999987765443 22    2111    13554433 222222221 12


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      ..+|++|+++|..                       ..++.+++.++   ++|+++.+++..
T Consensus       235 ~g~D~vid~~g~~-----------------------~~~~~~~~~l~---~~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-----------------------KALEQGLQAVT---PAGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH-----------------------HHHHHHHHHEE---EEEEEEECCCCS
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHHHh---cCCEEEEEccCC
Confidence            3699999999841                       12344445554   358999988743

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.63  E-value=0.00021  Score=62.37  Aligned_cols=82  Identities=15%  Similarity=0.226  Sum_probs=64.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++.+++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            477899999998 7899999999999998 788887642                   6788888888888877777777


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..+++. +.+.++++       ..|+||++.
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~  126 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCT  126 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECC
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECC
Confidence            766653 44555554       479999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.62  E-value=0.00066  Score=62.07  Aligned_cols=81  Identities=25%  Similarity=0.260  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhc-C
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSL-K  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~-~  137 (339)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+. +    .+. .. +  .|..+ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~----lGa-~~-~--~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-N----CGA-DV-T--LVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H----TTC-SE-E--EECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-H----hCC-CE-E--EcCcccccHHHHHHHHhcccc
Confidence            4789999997 89999999988889999999999987765442 2    222 21 1  24443 2222222221110 1


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+.+|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2469999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.61  E-value=0.00013  Score=65.32  Aligned_cols=94  Identities=19%  Similarity=0.231  Sum_probs=61.1

Q ss_pred             cCCCE-EEEEcCCC-----------------c-hHHHHHHHHHHCCCEEEEEecCchhHH--------HHHHHHHhhc-C
Q 019551           59 IEGKN-CVVTGANA-----------------G-IGYATAEGLASRGATVYMVCRSKEKGE--------TALSAIRSKT-G  110 (339)
Q Consensus        59 l~~k~-vlITGas~-----------------g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~--------~~~~~l~~~~-~  110 (339)
                      +.||+ ||||+|..                 | .|.++|++++++||.|+++.+...-..        ...+.+.... .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            67887 99998754                 5 999999999999999999998543100        0011110000 0


Q ss_pred             CccEEEEeccCCCHHHHHHHHHHH------------------------------hcCCCCccEEEEcccccc
Q 019551          111 NENVHLELCDLSSITEIKSFANRF------------------------------SLKNKPVHVLVNNAGVLE  152 (339)
Q Consensus       111 ~~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~~~id~lInnAG~~~  152 (339)
                      ...+..+.+|+...+++.+.+...                              .+.++..|++|.+|++..
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            123445666777666666665443                              234578999999999865

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.61  E-value=0.0002  Score=56.45  Aligned_cols=73  Identities=11%  Similarity=0.122  Sum_probs=55.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++++|.|+ |.+|..+|+.|.+.|++|+++++++++.+...+    .    .+.++.+|.++++.++++      .....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc------CcccC
Confidence            46778887 889999999999999999999999987665432    1    356788999998876553      11357


Q ss_pred             cEEEEccc
Q 019551          142 HVLVNNAG  149 (339)
Q Consensus       142 d~lInnAG  149 (339)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88887654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.60  E-value=4.6e-05  Score=60.45  Aligned_cols=71  Identities=11%  Similarity=0.108  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|++++.++..+++.       ....  +..+.   .+.++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-------~~~~--~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-------YEYV--LINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-------CEEE--ECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-------CceE--eecCH---HHHhc-------C
Confidence            789999997 999999999999999999999999988776655542       1111  22333   33333       5


Q ss_pred             ccEEEEccccc
Q 019551          141 VHVLVNNAGVL  151 (339)
Q Consensus       141 id~lInnAG~~  151 (339)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            89999998754

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.59  E-value=0.0012  Score=59.44  Aligned_cols=117  Identities=20%  Similarity=0.173  Sum_probs=71.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++.|+||+|.+|..++..|+..|  ..|+++++++  .+....++.+.....++....    ..++.++.++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            58999999999999999999988  6899999987  333444554322111222221    0123333333       6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                      .|++|+.||...... .+.   ...+..|+.....+.+    .+.+..+.+.|+++|-..
T Consensus        69 aDvVvi~ag~~~~~g-~~r---~dl~~~n~~i~~~i~~----~i~~~~p~a~viv~sNPv  120 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MTR---DDLFNTNATIVATLTA----ACAQHCPDAMICIISNPV  120 (314)
T ss_dssp             CSEEEECCSCCCCTT-CCG---GGGHHHHHHHHHHHHH----HHHHHCTTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCC-CcH---HHHHHHHHHHHHHHHH----HHHhhCCCeEEEEECCCc
Confidence            899999999865322 111   2335666655544444    444444678888876543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.57  E-value=0.00025  Score=65.41  Aligned_cols=75  Identities=17%  Similarity=0.287  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+|+ |+||..+++.+...|++|+++++++++++.+.++    .+...    ..|..+.+.+.+       ..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~----v~~~~~~~~~~~-------~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN----FGADS----FLVSRDQEQMQA-------AAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT----SCCSE----EEETTCHHHHHH-------TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cCCce----EEeccCHHHHHH-------hhC
Confidence            5889999996 9999999999999999999999998876654433    23221    235666543322       224


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.56  E-value=0.00088  Score=59.37  Aligned_cols=43  Identities=21%  Similarity=0.122  Sum_probs=37.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      +++.|.|+ |.+|.++|+.|++.|++|++.+|+++.+++..+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            57778876 88999999999999999999999999888776654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.55  E-value=0.0015  Score=59.14  Aligned_cols=118  Identities=14%  Similarity=0.126  Sum_probs=78.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh--cCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSK--TGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ...+++.|+|+ |++|.++|..|+..|.  .|++.++++++++....++...  ++.........   |.++        
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~---d~~~--------   84 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK---DYSV--------   84 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS---SGGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC---CHHH--------
Confidence            34678999998 9999999999999987  8999999998888877777653  22111111222   2221        


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                         ...-|++|..||...... .+   -.+.++.|..-.    +.+.+.+.+..+.+.++++|-.
T Consensus        85 ---~~~aDiVvi~aG~~~kpG-~t---R~dL~~~N~~I~----~~i~~~i~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           85 ---TANSKLVIITAGARQQEG-ES---RLNLVQRNVNIF----KFIIPNVVKYSPQCKLLIVSNP  138 (331)
T ss_dssp             ---GTTEEEEEECCSCCCCTT-CC---GGGGHHHHHHHH----HHHHHHHHHHCTTCEEEECSSS
T ss_pred             ---hCCCCEEEEccCCCCCCC-cc---HHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecCh
Confidence               137899999999865322 22   233456665444    4444455555467888888754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.47  E-value=0.00038  Score=64.35  Aligned_cols=76  Identities=25%  Similarity=0.390  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+|+||..+++.+...|++|++++ ++++.+.+ ++    .+. ...   .|..+.+-.    +++.+. +
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~----lGa-~~v---~~~~~~~~~----~~~~~~-~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RK----LGA-DDV---IDYKSGSVE----EQLKSL-K  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HH----TTC-SEE---EETTSSCHH----HHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HH----cCC-CEE---EECCchHHH----HHHhhc-C
Confidence            489999999999999999998888999999988 45554433 22    222 211   254443322    223322 5


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+|+|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.46  E-value=0.00054  Score=62.42  Aligned_cols=118  Identities=18%  Similarity=0.119  Sum_probs=73.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh-cCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSK-TGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++++.|+|++|.+|..+|..++..|.  +|+++|.++++++....++... ++..++.+ .   +|   ..+.++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC---
Confidence            4567899999999999999999999984  7999999998887766666543 12112221 1   12   222222   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCE-EEEEcC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDAR-VITVSS  198 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~-Iv~vsS  198 (339)
                          .-|++|.+||......    +.-.+.+..|..-.    +.+.+.+.+..+.+. |+++|-
T Consensus        76 ----dADvVvitaG~p~kpG----~~R~dLl~~N~~I~----~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPRKEG----MTREDLLKGNAEIA----AQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             ----TEEEEEECCC-----------CHHHHHHHHHHHH----HHHHHHHHHHCTTCCEEEECSS
T ss_pred             ----CCCEEEEccCCCCCCC----CCHHHHHHHHHHHH----HHHHHHHHHhccCcEEEEEecC
Confidence                6899999999754321    12233455665444    455555555545674 677764

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.45  E-value=0.00048  Score=62.38  Aligned_cols=63  Identities=16%  Similarity=0.190  Sum_probs=53.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+.+.+.+.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            477899999998 8999999999999998 799988753                   5788888888888887777777


Q ss_pred             eccC
Q 019551          118 LCDL  121 (339)
Q Consensus       118 ~~Dl  121 (339)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            6554

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.43  E-value=0.0017  Score=58.62  Aligned_cols=117  Identities=17%  Similarity=0.190  Sum_probs=74.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC----CccEEEEeccCCCHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG----NENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ++.+++.|+|| |.+|.++|..|+..|. +|++.++++++++....++.....    ..++.. ..|   .+.+      
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~a~------   73 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YAAI------   73 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GGGG------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HHHH------
Confidence            34568999998 9999999999999998 999999999887766555554321    122221 122   2211      


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                           ..-|++|..+|....... +.   .+.+..|.    ...+.+.+.+.+..+.+.++++|-.
T Consensus        74 -----~~aDiVIiaag~p~k~G~-~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           74 -----EGADVVIVTAGVPRKPGM-SR---DDLLGINL----KVMEQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             -----TTCSEEEECCSCCCC---------CHHHHHHH----HHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             -----CCCCEEEEccCcCCCCCC-CH---HHHHHhhH----HHHHHHHHHHHHHCCCeEEEecCCC
Confidence                 368999999997643221 11   22344444    3445555666665567888888754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.42  E-value=0.00091  Score=61.42  Aligned_cols=83  Identities=19%  Similarity=0.087  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|||+|+ |++|...++.+...|++ |+++++++++++.+. ++     ...+..+..|-.+.+++.+.+.+... .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-----CPEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-----CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----chhcccccccccchHHHHHHHHHHhC-C
Confidence            4889999998 99999999888889997 999999988766443 22     12344444555555655544444322 2


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.39  E-value=0.00094  Score=60.37  Aligned_cols=118  Identities=13%  Similarity=0.107  Sum_probs=71.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ..++++.|+|+ |++|.++|..|+..|.  +|+++++++++++....++....+- ..+.+...   +.+.         
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~a---------   73 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYSD---------   73 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHHH---------
Confidence            34678999997 9999999999999887  8999999998888777777654320 12333322   2221         


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                        ...-|++|+.||......    +.-...++.|.--    .+.+.+.+.+..+.+.++++|-.
T Consensus        74 --~~~aDiVvi~ag~~~kpG----~tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNP  127 (326)
T 3vku_A           74 --AKDADLVVITAGAPQKPG----ETRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             --GTTCSEEEECCCCC--------------------C----HHHHHHHHHTTTCCSEEEECSSS
T ss_pred             --hcCCCEEEECCCCCCCCC----chHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCc
Confidence              236899999999754322    1122334555433    44555556555567888887753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.37  E-value=0.0017  Score=58.65  Aligned_cols=116  Identities=15%  Similarity=0.096  Sum_probs=76.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC--ccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN--ENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++.|+|+ |.+|.++|..|+..|.  +|+++++++++++....++....+-  ..+.+...|   .+.          
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~a----------   70 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YED----------   70 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HHH----------
Confidence            467999996 9999999999999987  8999999998888777677654321  123333222   111          


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                       ...-|++|.+||...... .+   -...++.|..-    .+.+.+.+.+..+.+.++++|-.
T Consensus        71 -~~~aDvVvi~ag~p~kpG-~~---R~dL~~~N~~I----v~~i~~~I~~~~p~a~vlvvtNP  124 (326)
T 3pqe_A           71 -CKDADIVCICAGANQKPG-ET---RLELVEKNLKI----FKGIVSEVMASGFDGIFLVATNP  124 (326)
T ss_dssp             -GTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHTTCCSEEEECSSS
T ss_pred             -hCCCCEEEEecccCCCCC-cc---HHHHHHHHHHH----HHHHHHHHHHhcCCeEEEEcCCh
Confidence             236899999999754322 12   22335556544    44455555555567888888754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.37  E-value=0.00036  Score=59.29  Aligned_cols=73  Identities=16%  Similarity=0.159  Sum_probs=56.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++|.|+ |.+|..+|+.|.+.|++|+++++++++.++..++.       ...++.+|.++.+.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4889997 89999999999999999999999988766543321       356788999998877643      123678


Q ss_pred             EEEEccc
Q 019551          143 VLVNNAG  149 (339)
Q Consensus       143 ~lInnAG  149 (339)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            8886654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.37  E-value=0.0005  Score=64.26  Aligned_cols=73  Identities=22%  Similarity=0.368  Sum_probs=53.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.+++++..+++    + .  ..  .+.   +++.+.+.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----g-~--~~--~~~---~~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----G-G--EA--VRF---DELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----T-C--EE--CCG---GGHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----C-C--ce--ecH---HhHHHHhc----
Confidence            368999999998 9999999999999999 9999999988765555443    2 1  11  222   23333332    


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                         ..|++|++.|.
T Consensus       227 ---~aDvVi~at~~  237 (404)
T 1gpj_A          227 ---RSDVVVSATAA  237 (404)
T ss_dssp             ---TCSEEEECCSS
T ss_pred             ---CCCEEEEccCC
Confidence               68999999764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.37  E-value=0.00046  Score=60.65  Aligned_cols=43  Identities=26%  Similarity=0.251  Sum_probs=39.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      +|+++|.|+ ||.|++++..|++.|.+|.+++|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 99999999999999999999999999888766 44

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.34  E-value=0.00077  Score=61.97  Aligned_cols=78  Identities=21%  Similarity=0.277  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+| +|++|...++.+...|++|+++++++++++.+. ++    +. ...   .| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga-~~v---i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-AL----GA-DHG---IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH----TC-SEE---EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-Hc----CC-CEE---Ec-CCcccHHHHHHHHhC-CC
Confidence            488999999 799999999999899999999999988766532 22    22 211   24 332333333333322 23


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|+++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.34  E-value=4.4e-05  Score=67.57  Aligned_cols=42  Identities=21%  Similarity=0.202  Sum_probs=37.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGET  100 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~  100 (339)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            367899999998 7999999999999999 89999999887553

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.00027  Score=63.97  Aligned_cols=75  Identities=21%  Similarity=0.235  Sum_probs=49.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++|+||+|++|...++.+...|++|+++++++++++.+. +    .+...+    +|..+.+  .+.++++  ..+.+|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~----lGa~~~----i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V----LGAKEV----LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H----TTCSEE----EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H----cCCcEE----EecCCcH--HHHHHHh--cCCccc
Confidence            7999999999999999998889999999999988766543 2    222221    2444432  1222222  124699


Q ss_pred             EEEEcccc
Q 019551          143 VLVNNAGV  150 (339)
Q Consensus       143 ~lInnAG~  150 (339)
                      ++|+|+|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.29  E-value=0.00038  Score=58.72  Aligned_cols=42  Identities=24%  Similarity=0.343  Sum_probs=36.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      +++|+||+|.+|.++++.|++.|++|++.+|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999999999999999999999999998877665543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.26  E-value=0.002  Score=58.38  Aligned_cols=117  Identities=15%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--E-----EEEEecCc--hhHHHHHHHHHhh-cCCccEEEEeccCCCHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--T-----VYMVCRSK--EKGETALSAIRSK-TGNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~-----Vvl~~r~~--~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      .+|.||||+|.||..++..|+..|.  +     |+++|+++  ++++....++... .+-  ..-+.  ..  .+..+.+
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~~~~--~~--~~~~~~~   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LKDVI--AT--DKEEIAF   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EEEEE--EE--SCHHHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cCCEE--Ec--CCcHHHh
Confidence            4699999999999999999998876  5     99999975  4566666666553 221  11111  11  1111112


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCC-EEEEEcCc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDA-RVITVSSG  199 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~-~Iv~vsS~  199 (339)
                             ...|++|+.||......    +.-.+.++.|......+.    +.+.+....+ +++++|-.
T Consensus        78 -------~daDvVvitAg~prkpG----~tR~dll~~N~~i~~~i~----~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           78 -------KDLDVAILVGSMPRRDG----MERKDLLKANVKIFKCQG----AALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             -------TTCSEEEECCSCCCCTT----CCTTTTHHHHHHHHHHHH----HHHHHHSCTTCEEEECSSS
T ss_pred             -------CCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHH----HHHHHhCCCCeEEEEcCCc
Confidence                   36899999999764322    223445677776654444    4455554555 57777753

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.20  E-value=0.00086  Score=65.03  Aligned_cols=63  Identities=17%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..|.+.+.+.+.+.++..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            467899999998 8999999999999998 79999654                   35888889999988887777777


Q ss_pred             eccC
Q 019551          118 LCDL  121 (339)
Q Consensus       118 ~~Dl  121 (339)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.19  E-value=0.0083  Score=54.16  Aligned_cols=116  Identities=16%  Similarity=0.091  Sum_probs=75.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++.|+|+ |.+|..+|..|+..|.  .|++.++++++++....++....  ....-.....|..+             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------   86 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------   86 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------------
Confidence            568999999 9999999999999997  89999999988887766665431  11111112233322             


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                       +..-|++|..||....... +.   .+.+..|..-    .+.+.+.+.+..+.+.++++|-.
T Consensus        87 -~~daDiVIitaG~p~kpG~-tR---~dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 -SAGSKLVVITAGARQQEGE-SR---LNLVQRNVNI----FKFIIPNIVKHSPDCLKELHPEL  140 (330)
T ss_dssp             -CSSCSEEEECCSCCCCSSC-CT---TGGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSS
T ss_pred             -hCCCCEEEEeCCCCCCCCC-CH---HHHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCc
Confidence             2368999999998654332 21   2234445433    44555555555567888888753

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.19  E-value=0.00061  Score=62.43  Aligned_cols=83  Identities=17%  Similarity=0.278  Sum_probs=66.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3577899999998 8999999999999997 799998753                   477788888888888888888


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +..+++...++.       + +...|+||.+.
T Consensus       193 ~~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          193 IALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             EECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             eecccCchhhhh-------H-hccCCEEEEec
Confidence            888887655322       2 45789998876

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.19  E-value=0.00089  Score=61.45  Aligned_cols=86  Identities=12%  Similarity=0.130  Sum_probs=52.5

Q ss_pred             CC-CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCH--HHHHHHHHHHhc
Q 019551           60 EG-KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI--TEIKSFANRFSL  136 (339)
Q Consensus        60 ~~-k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~  136 (339)
                      .| ++|+|+||+|++|...++.+...|++|++++++.+++++..+.+++ .+...+  +  |..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa~~v--i--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGATQV--I--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTCSEE--E--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-cCCeEE--E--ecCccchHHHHHHHHHHhh
Confidence            47 8999999999999999888878899999998877653332233322 232221  1  22210  122222222210


Q ss_pred             -CCCCccEEEEcccc
Q 019551          137 -KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 -~~~~id~lInnAG~  150 (339)
                       ..+.+|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             12479999999983

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.19  E-value=0.001  Score=64.50  Aligned_cols=63  Identities=16%  Similarity=0.190  Sum_probs=53.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.++|++.                   .+.+.+.+.+.+.+|..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467899999998 8999999999999998 799998853                   5788888999998887777777


Q ss_pred             eccC
Q 019551          118 LCDL  121 (339)
Q Consensus       118 ~~Dl  121 (339)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7655

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.18  E-value=0.0028  Score=57.99  Aligned_cols=79  Identities=24%  Similarity=0.179  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC--CHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS--SITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  136 (339)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. +    .+...  +  .|..  +.++..+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~--v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E----IGADL--V--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H----TTCSE--E--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H----hCCCE--E--EcCcccccchHHHHHHHHhC
Confidence            4889999996 8999999988888999 8999999987765432 2    22221  1  2444  22333332333222


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                        +.+|++|+++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.18  E-value=0.00049  Score=62.74  Aligned_cols=77  Identities=22%  Similarity=0.286  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|+|| |++|...++.+...|+ +|+++++++++++.+.+ +     ...    ..|..+. ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-----a~~----v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-----ADR----LVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-----CSE----EECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----HHh----ccCcCcc-CHHHHHHHhc--C
Confidence            4789999999 9999999998888999 99999999876543211 1     111    1355443 2333333333  3


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|+++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.17  E-value=0.0057  Score=54.99  Aligned_cols=117  Identities=21%  Similarity=0.185  Sum_probs=73.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC--chhHHHHHHHHHhhc----CCccEEEEeccCCCHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS--KEKGETALSAIRSKT----GNENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      ++.+++.|+|+ |.+|.++|..|+..|. +|++.+++  +++++....++....    ...++..- .|   .+.     
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~~a-----   75 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---YAD-----   75 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG-----
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---HHH-----
Confidence            45678999997 9999999999999999 99999999  555555444444321    11122211 12   221     


Q ss_pred             HHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          132 NRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       132 ~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                            +..-|++|.+||...... .+   -.+.++.|..-    .+.+.+.+.+..+.+.++++|-.
T Consensus        76 ------~~~aDvVIiaag~p~kpg-~~---R~dl~~~N~~i----~~~i~~~i~~~~p~a~vlvvsNP  129 (315)
T 3tl2_A           76 ------TADSDVVVITAGIARKPG-MS---RDDLVATNSKI----MKSITRDIAKHSPNAIIVVLTNP  129 (315)
T ss_dssp             ------GTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHHCTTCEEEECCSS
T ss_pred             ------hCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHH----HHHHHHHHHHhCCCeEEEECCCh
Confidence                  237899999999765332 12   23345555544    44455555555467888888753

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.17  E-value=0.0053  Score=55.37  Aligned_cols=118  Identities=14%  Similarity=0.159  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +.+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.....  .....+...  .+.+.          
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a----------   70 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD----------   70 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH----------
Confidence            3467888895 9999999999999988 999999999888766666654321  111222211  12221          


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                       +..-|++|+.||...... .+.   .+.+..|..    ..+.+.+.+.+..+.+.++++|-.
T Consensus        71 -~~~aDvVIi~ag~p~k~G-~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNP  124 (321)
T 3p7m_A           71 -LENSDVVIVTAGVPRKPG-MSR---DDLLGINIK----VMQTVGEGIKHNCPNAFVICITNP  124 (321)
T ss_dssp             -GTTCSEEEECCSCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             -HCCCCEEEEcCCcCCCCC-CCH---HHHHHHhHH----HHHHHHHHHHHHCCCcEEEEecCc
Confidence             136899999999764322 222   233444544    445555555555567888887643

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.0026  Score=58.79  Aligned_cols=80  Identities=18%  Similarity=0.220  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC--CHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS--SITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  136 (339)
                      .|++|||+| +|++|...++.+...| ++|+++++++++++.+. +    .+...  +  .|..  +.+++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~--v--i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E----IGADL--T--LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H----TTCSE--E--EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H----cCCcE--E--EeccccCcchHHHHHHHHhC
Confidence            378999999 8999999999888899 59999999988765443 2    22221  2  2333  23444333333321


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                       ...+|++|+++|.
T Consensus       265 -g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 -GRGADFILEATGD  277 (380)
T ss_dssp             -TSCEEEEEECSSC
T ss_pred             -CCCCcEEEECCCC
Confidence             1269999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0014  Score=60.47  Aligned_cols=79  Identities=23%  Similarity=0.317  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. +    .+...  +  .|..+ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~--v--i~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V----FGATD--F--VNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCCE--E--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----hCCce--E--EeccccchhHHHHHHHHhC-
Confidence            4789999996 9999999998888999 8999999988876543 2    22211  1  34443 1234444444333 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|+++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.13  E-value=0.0017  Score=59.93  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+|++|...++.+...|++|+.+. ++++++.+ ++    .+...+    .|..+.+ +.+.+.++  ..+
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~----lGa~~v----i~~~~~~-~~~~v~~~--t~g  230 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KS----RGAEEV----FDYRAPN-LAQTIRTY--TKN  230 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HH----TTCSEE----EETTSTT-HHHHHHHH--TTT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HH----cCCcEE----EECCCch-HHHHHHHH--ccC
Confidence            589999999999999999999989999999886 56665422 22    232211    3444433 22222222  224


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      ++|++|.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            59999999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.12  E-value=0.0018  Score=59.39  Aligned_cols=78  Identities=22%  Similarity=0.216  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|+|| |++|...++.+... |++|+++++++++++.+. +    .+...+    .|..+.  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~----lGa~~v----i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R----LGADHV----VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H----TTCSEE----EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H----hCCCEE----Eeccch--HHHHHHHHhC-C
Confidence            4889999999 89999998888788 999999999988765443 2    232221    355543  3333333322 2


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            269999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.12  E-value=0.0015  Score=60.13  Aligned_cols=81  Identities=27%  Similarity=0.331  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++    +...    ..|..+.+-.+.+.+......
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga~~----vi~~~~~~~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV----GATA----TVDPSAGDVVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH----TCSE----EECTTSSCHHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc----CCCE----EECCCCcCHHHHHHhhhhccC
Confidence            4889999998 8999999988888999 899999988775533 222    2221    135544432222211111223


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.11  E-value=0.0053  Score=54.61  Aligned_cols=115  Identities=13%  Similarity=0.135  Sum_probs=73.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|+|+ |.+|.++|..|+..|.  +|++.++++++++....++.....  .....+...  +|.+.+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~-----------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh-----------
Confidence            5789999 9999999999999998  899999999887644444433221  112222211  122222           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|..||...... .+.   .+.+..|.    -+.+.+.+.+.+..+.+.++++|-.
T Consensus        68 ~~aDiVViaag~~~kpG-~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           68 KGSEIIVVTAGLARKPG-MTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             TTCSEEEECCCCCCCSS-CCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             CCCCEEEECCCCCCCCC-CcH---HHHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCc
Confidence            26799999999764322 222   22345553    3456666666666567888888753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.10  E-value=0.0022  Score=58.28  Aligned_cols=76  Identities=18%  Similarity=0.164  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+. +    .+. ...   .|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~----lGa-~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-R----LGA-EVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H----TTC-SEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-H----cCC-CEE---EeCCCcCHHHHHHH----hCC
Confidence            4889999997 89999999988889999999999988766432 2    222 221   34444333333322    224


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|++|.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            7999999987

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.09  E-value=0.00095  Score=61.37  Aligned_cols=77  Identities=16%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc-C
Q 019551           60 EGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL-K  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~  137 (339)
                      .|++|||+||+|++|...++.+.. .|++|+++++++++++.+. +    .+...+    .|..+  ++   .+++.+ .
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~----lGad~v----i~~~~--~~---~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-S----LGAHHV----IDHSK--PL---AAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-H----TTCSEE----ECTTS--CH---HHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-H----cCCCEE----EeCCC--CH---HHHHHHhc
Confidence            478999999999999988776665 5899999999988765442 2    232221    24433  22   233333 3


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+.+|++|.|+|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence            3579999999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.002  Score=59.27  Aligned_cols=74  Identities=23%  Similarity=0.335  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.+.+ +    +...    ..|..+.+.+    +++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l----Ga~~----vi~~~~~~~~----~~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L----GADE----VVNSRNADEM----AAHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H----TCSE----EEETTCHHHH----HTTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCcE----EeccccHHHH----HHhh---c
Confidence            4789999998 899999999888899999999999888765432 2    2221    1355554332    2222   5


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.06  E-value=0.0018  Score=59.68  Aligned_cols=79  Identities=23%  Similarity=0.309  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++    +...  +  .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~--v--i~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV----GATE--C--VNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE--E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCce--E--ecccccchhHHHHHHHHhC-
Confidence            4789999995 9999999998888999 8999999988876542 22    2221  1  34433 1233333444332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|+++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.00  E-value=0.0015  Score=59.89  Aligned_cols=75  Identities=23%  Similarity=0.367  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.+.+ +    +...+    .|..+..+   +.+.+.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v----~~~~~~~~---~~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M----GADHY----IATLEEGD---WGEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSEE----EEGGGTSC---HHHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c----CCCEE----EcCcCchH---HHHHhh---c
Confidence            4889999999 999999998888899999999999888665432 2    22211    23333201   122222   5


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.00  E-value=0.0011  Score=60.55  Aligned_cols=70  Identities=21%  Similarity=0.338  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++.+.+.+     .+...+ +     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~v-~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-----MGVKHF-Y-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-----TTCSEE-E-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-----cCCCee-c-----CCHHHHhc----------
Confidence            4889999997 999999999888899999999999988764432     232222 2     33332211          


Q ss_pred             CccEEEEccccc
Q 019551          140 PVHVLVNNAGVL  151 (339)
Q Consensus       140 ~id~lInnAG~~  151 (339)
                      .+|++|+++|..
T Consensus       234 ~~D~vid~~g~~  245 (348)
T 3two_A          234 ELDFIISTIPTH  245 (348)
T ss_dssp             CEEEEEECCCSC
T ss_pred             CCCEEEECCCcH
Confidence            799999999843

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.99  E-value=0.0021  Score=59.13  Aligned_cols=79  Identities=23%  Similarity=0.253  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. ++    +...+    .|..+ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~v----i~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF----GATEC----INPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH----TCSEE----ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc----CCceE----eccccccccHHHHHHHHhC-
Confidence            4789999996 9999999988888899 8999999988876543 22    22211    24433 1233333443332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|+++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.99  E-value=0.002  Score=58.06  Aligned_cols=41  Identities=29%  Similarity=0.336  Sum_probs=36.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      |+ ++|+||+|++|...++.+...|++|+++++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            46 999999999999999999899999999999988876553

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.98  E-value=0.0025  Score=58.76  Aligned_cols=79  Identities=20%  Similarity=0.280  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|+|+|+ |+||...++.+...|+ +|+++++++++++.+. ++    +...  +  .|..+ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~--v--i~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL----GATD--C--LNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE--E--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCcE--E--EccccccchHHHHHHHHhC-
Confidence            4789999996 9999999988888999 8999999988866442 22    2211  1  24432 1223333333332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             379999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.98  E-value=0.0012  Score=60.47  Aligned_cols=75  Identities=19%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+.++    .+...+    .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~v----i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----LGADDY----VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----SCCSCE----EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----cCCcee----eccccHHHHH-------HhcC
Confidence            5889999996 9999999988888899999999998876544322    232222    2444543332       2224


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.97  E-value=0.0045  Score=56.30  Aligned_cols=77  Identities=21%  Similarity=0.333  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .|++|+|+|| |++|...++.+...  |++|+++++++++++.+. ++    +...+    .|..+.   .+..+++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~v----i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL----GADYV----SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH----TCSEE----ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh----CCCEE----eccccc---hHHHHHhhc-
Confidence            4889999999 89999999888888  999999999988765443 22    22211    233220   122333332 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      ...+|++|+++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2379999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.95  E-value=0.0039  Score=58.09  Aligned_cols=79  Identities=22%  Similarity=0.347  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. ++    +...  +  .|..+.+-.+. +.++. ..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~--v--i~~~~~~~~~~-i~~~t-~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL----GADH--V--IDPTKENFVEA-VLDYT-NG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HH----TCSE--E--ECTTTSCHHHH-HHHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hc----CCCE--E--EcCCCCCHHHH-HHHHh-CC
Confidence            4889999998 8999999988888999 8999999987765432 22    2221  1  24444332222 22221 12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.94  E-value=0.0017  Score=59.98  Aligned_cols=81  Identities=17%  Similarity=0.276  Sum_probs=53.9

Q ss_pred             CCCEEEEEc-CCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTG-ANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITG-as~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|.| |+|++|...++.+...|++|+++++++++++.+.+     .+...+    .|..+.+-.+++.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~~----~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-----QGAVHV----CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-----TTCSCE----EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----CCCcEE----EeCCChHHHHHHHHHhcC--
Confidence            478899997 89999999998888889999999999887664432     232222    244443322222221111  


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ..+|++|.|+|..
T Consensus       239 ~g~d~v~d~~g~~  251 (379)
T 3iup_A          239 TGATIAFDATGGG  251 (379)
T ss_dssp             HCCCEEEESCEEE
T ss_pred             CCceEEEECCCch
Confidence            2699999999853

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.94  E-value=0.0025  Score=59.38  Aligned_cols=43  Identities=26%  Similarity=0.239  Sum_probs=38.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .+.+++|+|+|+ |.+|+.+++.+...|++|++++|++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367999999997 8999999999999999999999999877654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.91  E-value=0.001  Score=57.11  Aligned_cols=72  Identities=6%  Similarity=0.108  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .++++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...         ..+.++.+|.++++.++++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc------Ccch
Confidence            467899998 8999999999999999 999999988655432         1367788999998876543      1236


Q ss_pred             ccEEEEccc
Q 019551          141 VHVLVNNAG  149 (339)
Q Consensus       141 id~lInnAG  149 (339)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            788887653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.89  E-value=0.00082  Score=59.50  Aligned_cols=43  Identities=33%  Similarity=0.460  Sum_probs=38.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETAL  102 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~  102 (339)
                      +.+|+++|.|+ ||.|++++..|.+.|+ +|.+++|+.++++++.
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            67899999998 7999999999999998 8999999998766554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.88  E-value=0.0017  Score=59.39  Aligned_cols=76  Identities=13%  Similarity=0.194  Sum_probs=51.3

Q ss_pred             cCCCEEEEEcCCCchHHHH-HHHH-HHCCCE-EEEEecCch---hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYAT-AEGL-ASRGAT-VYMVCRSKE---KGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~-a~~l-~~~G~~-Vvl~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      +++++|+|+|| |++|... ++.+ ...|++ |+.++++++   +++.+. +    .+   ...+  |..+.+ +.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~----lG---a~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E----LD---ATYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H----TT---CEEE--ETTTSC-GGG-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H----cC---Cccc--CCCccC-HHH-HH
Confidence            34589999999 9999998 7666 567997 999999987   665442 2    22   1222  544322 333 33


Q ss_pred             HHhcCCCCccEEEEcccc
Q 019551          133 RFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~  150 (339)
                      ++   .+.+|++|.++|.
T Consensus       238 ~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HH---SCCEEEEEECSCC
T ss_pred             Hh---CCCCCEEEECCCC
Confidence            33   2379999999983

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.84  E-value=0.0019  Score=59.69  Aligned_cols=79  Identities=24%  Similarity=0.257  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+.     ..+...  +  .|..+ .+++.+.+.++.. 
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-----~lGa~~--v--i~~~~~~~~~~~~i~~~~~-  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-----KFGVNE--F--VNPKDHDKPIQEVIVDLTD-  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-----TTTCCE--E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----HcCCcE--E--EccccCchhHHHHHHHhcC-
Confidence            4789999998 9999999988888899 8999999998866332     222221  1  24432 2333333443322 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       262 -gg~D~vid~~g~  273 (378)
T 3uko_A          262 -GGVDYSFECIGN  273 (378)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999984

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.84  E-value=0.006  Score=54.20  Aligned_cols=115  Identities=13%  Similarity=0.126  Sum_probs=74.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|.|+|| |+||..+|..|+.+|.  ++++.|.++++.+....++....+  +........  .|.+++           
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~~-----------   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHHh-----------
Confidence            4678896 9999999999998875  799999998887777777765321  112222221  122221           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|..||...... .+.   ++.++.|..    +.+.+.+.+.+..+.+.++.+|-.
T Consensus        68 ~~aDvVvitAG~prkpG-mtR---~dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKPG-MTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             TTCSEEEECCCCCCCSS-SCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             CCCCEEEEecCCCCCCC-Cch---HHHHHHHHH----HHHHHHHHHHhcCCceEEEEecCc
Confidence            26799999999876433 233   334566654    455666666666567888777753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.81  E-value=0.00059  Score=59.52  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=35.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETA  101 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~  101 (339)
                      +.| +++|.|+ ||.|++++..|++.|+ +|++.+|+.++++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            467 8999997 8999999999999998 899999998775543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.004  Score=57.25  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. ++    +. .. +  .|..+.+-.++ +.++.  .
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga-~~-v--i~~~~~~~~~~-~~~~~--~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL----GA-TH-V--INSKTQDPVAA-IKEIT--D  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH----TC-SE-E--EETTTSCHHHH-HHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc----CC-CE-E--ecCCccCHHHH-HHHhc--C
Confidence            4789999995 8999999888878899 6999999988765442 22    22 21 1  24433222222 22221  2


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|+++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.77  E-value=0.019  Score=51.50  Aligned_cols=115  Identities=18%  Similarity=0.175  Sum_probs=71.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-C--CEEEEEecCchhHHHHHHHHHhhcCCccEEEEec-cCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASR-G--ATVYMVCRSKEKGETALSAIRSKTGNENVHLELC-DLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G--~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|.|+||+|.+|.+++..|+.. +  .+++++++++ +.+....++....  ..+.+... .-.+.+.+           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~--~~~~v~~~~~~~~~~~~-----------   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP--TAVKIKGFSGEDATPAL-----------   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC--SSEEEEEECSSCCHHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC--CCceEEEecCCCcHHHh-----------
Confidence            5789999999999999999875 5  4799999987 4555555555431  22222211 11123322           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ...|++|..||...... .+   -.+.++.|..-.    +.+.+.+.+..+.+.++++|-.
T Consensus        68 ~~aDivii~ag~~rkpG-~~---R~dll~~N~~I~----~~i~~~i~~~~p~a~vlvvtNP  120 (312)
T 3hhp_A           68 EGADVVLISAGVARKPG-MD---RSDLFNVNAGIV----KNLVQQVAKTCPKACIGIITNP  120 (312)
T ss_dssp             TTCSEEEECCSCSCCTT-CC---HHHHHHHHHHHH----HHHHHHHHHHCTTSEEEECSSC
T ss_pred             CCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHH----HHHHHHHHHHCCCcEEEEecCc
Confidence            26899999999764322 22   234456665444    4444445554467888888753

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.76  E-value=0.019  Score=52.17  Aligned_cols=120  Identities=13%  Similarity=0.070  Sum_probs=71.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSKE--KGETALSAIRSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      ++.-+|.|+||+|+||..++..|+....       .+++.|.++.  .++....++..............  ++..   +
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---V   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---H
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---H
Confidence            4456899999999999999999987643       6999998763  34445555554321111222221  1221   1


Q ss_pred             HHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcC
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSS  198 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS  198 (339)
                      .       +..-|++|..||...... .+.   ++.++.|..=    .+.+.+.+.+.. +...|+.+|-
T Consensus        97 a-------~~~advVvi~aG~prkpG-mtR---~DLl~~Na~I----~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           97 A-------FDGVAIAIMCGAFPRKAG-MER---KDLLEMNARI----FKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             H-------TTTCSEEEECCCCCCCTT-CCH---HHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSS
T ss_pred             H-------hCCCCEEEECCCCCCCCC-CCH---HHHHHHhHHH----HHHHHHHHHhhccCceEEEEeCC
Confidence            1       237899999999876433 233   3346666543    355555555542 3456666664

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.0044  Score=57.55  Aligned_cols=80  Identities=25%  Similarity=0.234  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|.|+ |++|...++.+...|+ +|+++++++++++.+. +    .+ .  ..  .|.++.+.+.+.+.++. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~----lG-a--~~--i~~~~~~~~~~~v~~~t-~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A----QG-F--EI--ADLSLDTPLHEQIAALL-GE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H----TT-C--EE--EETTSSSCHHHHHHHHH-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-H----cC-C--cE--EccCCcchHHHHHHHHh-CC
Confidence            4889999995 9999999888888999 7999999988766442 2    22 2  22  35444332222222222 12


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ..+|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999854

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.74  E-value=0.0038  Score=57.47  Aligned_cols=79  Identities=24%  Similarity=0.301  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|++|+|+|+ |+||...++.+...|+ +|+++++++++++.+. +    .+...  +  .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~--v--i~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E----LGATE--C--LNPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H----TTCSE--E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H----cCCcE--E--EecccccchHHHHHHHHhC-
Confidence            4789999996 9999999888878899 8999999988866443 2    22221  1  24332 1223333333322 


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                       +.+|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.73  E-value=0.0021  Score=57.86  Aligned_cols=74  Identities=18%  Similarity=0.283  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++++|+||+|++|...++.+...|++|+.++++ ++. +..++    .+...    ..|..+.+.+.+       ...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~----lGa~~----~i~~~~~~~~~~-------~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKA----LGAEQ----CINYHEEDFLLA-------IST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHH----HTCSE----EEETTTSCHHHH-------CCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHH----cCCCE----EEeCCCcchhhh-------hcc
Confidence            48899999999999999999999999999988854 332 22222    23222    134444332221       124


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|+++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.71  E-value=0.027  Score=50.39  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc----CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT----GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++.|+|| |.+|..++..|+..|. +|+++++++++++....++.+..    ...++... .|   .+.+         
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~a~---------   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---YADT---------   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---GGGG---------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---HHHH---------
Confidence            47899999 9999999999999997 99999999988876655554421    11222221 22   2221         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ...|++|.++|....... +..   ..+..|.    -+.+.+.+.+.+..+.+.|+++|-
T Consensus        69 --~~aD~Vi~a~g~p~~~g~-~r~---dl~~~n~----~i~~~i~~~i~~~~p~a~vi~~tN  120 (309)
T 1ur5_A           69 --ANSDVIVVTSGAPRKPGM-SRE---DLIKVNA----DITRACISQAAPLSPNAVIIMVNN  120 (309)
T ss_dssp             --TTCSEEEECCCC---------C---HHHHHHH----HHHHHHHHHHGGGCTTCEEEECCS
T ss_pred             --CCCCEEEEcCCCCCCCCC-CHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEcCC
Confidence              268999999987653221 111   1223332    344555666666545566666543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.66  E-value=0.0083  Score=54.33  Aligned_cols=118  Identities=18%  Similarity=0.095  Sum_probs=69.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh---cC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSK---TG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .++.|.|| |.+|.++|..|+..|+ +|++.++++++++.....+...   .+ ..++...    +|.+   +.++    
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~~----   77 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AALT----   77 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHHT----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHhC----
Confidence            47899998 9999999999999998 9999999998887754444332   11 1122211    2332   1222    


Q ss_pred             CCCCccEEEEccccccCCCC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                         .-|++|..+|....... .+--.-...+..|..    +.+.+.+.+.+..+.+.++++|-
T Consensus        78 ---~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~----i~~~i~~~i~~~~p~a~vi~~tN  133 (331)
T 1pzg_A           78 ---GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYCPKTFIIVVTN  133 (331)
T ss_dssp             ---TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHH----HHHHHHHHHHHHCCCcEEEEEcC
Confidence               67999999987643221 000011122333433    44455555555445666666554

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.66  E-value=0.013  Score=52.62  Aligned_cols=115  Identities=18%  Similarity=0.217  Sum_probs=71.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|+|+ |.+|.++|..|+..|.  .|++.++++++++....++.....  .....+...|  +.+.           +
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a-----------~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP-----------T   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH-----------h
Confidence            4788997 9999999999999887  899999999887766666654211  1122222222  2221           2


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|.+||...... .+   -.+.++.|..    +.+.+.+.+.+..+.+.++++|-.
T Consensus        68 ~~aDvVii~ag~~~kpG-~~---R~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNP  120 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-MS---RDDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVANP  120 (314)
T ss_dssp             TTCSEEEECCCC-----------CHHHHHHHHH----HHHHHHHHHHTTCTTCEEEECCSS
T ss_pred             CCCCEEEECCCCCCCCC-CC---HHHHHHhhHH----HHHHHHHHHHHhCCCcEEEecCCc
Confidence            36899999999764322 11   2233455543    455566666666567888888753

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.65  E-value=0.047  Score=49.10  Aligned_cols=117  Identities=17%  Similarity=0.112  Sum_probs=70.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh---cC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSK---TG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++.|.|| |.+|..+|..|+..|. +|++.++++++++.....+...   .. ..++... .|   .+.          
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~a----------   69 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---YDD----------   69 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---GGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HHH----------
Confidence            47889998 9999999999999998 9999999998887665555432   11 1222221 22   221          


Q ss_pred             CCCCccEEEEccccccCCCCCChhh-hhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEG-FELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                       +..-|++|.++|..........|. -...+..|.    -+.+.+.+.+.+..+.+.++++|-
T Consensus        70 -l~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~----~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           70 -LAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             -GTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -hCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence             136899999999754322111110 111233332    344555555555445677777654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.01  Score=54.92  Aligned_cols=44  Identities=18%  Similarity=0.125  Sum_probs=38.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|++.++++++++.+.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            356889999999 89999999999999999999999998766553

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.61  E-value=0.03  Score=50.24  Aligned_cols=114  Identities=15%  Similarity=0.108  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC--ccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN--ENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++....+.  ..+.+.. |  +.+.           
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~a-----------   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYDD-----------   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHHH-----------
Confidence            57999999 9999999999998875  8999999988666555555543221  1233332 1  2221           


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      +..-|++|.++|....... +.   ...+..|    .-+.+.+.+.+.+..+.+.++++|-
T Consensus        72 l~~aDvViia~~~~~~~g~-~r---~dl~~~n----~~i~~~i~~~i~~~~p~a~~iv~tN  124 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE-TR---LDLVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT-CS---GGGHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCCCC-CH---HHHHHcC----hHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            2368999999998654332 21   2223444    3345556666666545677776654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.61  E-value=0.0032  Score=57.60  Aligned_cols=38  Identities=24%  Similarity=0.380  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      .|++|||+||+|++|...++.+...|++|+++.++.++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            48899999999999999888877789998888766543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.59  E-value=0.0088  Score=54.97  Aligned_cols=43  Identities=16%  Similarity=0.094  Sum_probs=38.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      +.+++|+|.|+ |.+|..+++.+...|++|++.+|++++++.+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            57889999999 89999999999999999999999998876654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.58  E-value=0.027  Score=50.43  Aligned_cols=114  Identities=23%  Similarity=0.233  Sum_probs=73.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|+|| |.+|.+++..|+..+  ..|++.|+++++++....++....+ ..++.+.. |  +.+.+           .
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a~-----------~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGDL-----------E   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHHh-----------C
Confidence            5889998 999999999999987  5899999999888876777655321 01223322 2  23321           3


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      .-|++|..+|...... .+..   ..+..|..    ..+.+.+.+.+..+.+.|+++|-.
T Consensus        67 ~aD~Vii~ag~~~~~g-~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNP  118 (310)
T 2xxj_A           67 GARAVVLAAGVAQRPG-ETRL---QLLDRNAQ----VFAQVVPRVLEAAPEAVLLVATNP  118 (310)
T ss_dssp             TEEEEEECCCCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             CCCEEEECCCCCCCCC-cCHH---HHHHhhHH----HHHHHHHHHHHHCCCcEEEEecCc
Confidence            7899999999765322 1222   22344433    445555566665567888887653

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.57  E-value=0.015  Score=51.89  Aligned_cols=113  Identities=20%  Similarity=0.233  Sum_probs=63.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|+|| |.+|..+|..|+..|.  +|++.++++++++....++....+ .....+..   .+.+.           ..
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            5789998 9999999999999998  999999998877655555443221 01122211   12221           13


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      .-|++|.++|....... +   -.+.+..|..-.    +.+.+.+.+..+.+.|+++|-
T Consensus        67 ~aDvVIi~~~~~~~~g~-~---r~dl~~~n~~i~----~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           67 DAQVVILTAGANQKPGE-S---RLDLLEKNADIF----RELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             TCSEEEECC----------------CHHHHHHHH----HHHHHHHHHHCSSSEEEECSS
T ss_pred             CCCEEEEcCCCCCCCCC-c---HHHHHHhHHHHH----HHHHHHHHHhCCCeEEEEecC
Confidence            68999999987542211 1   122344454443    444444444335666666554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.56  E-value=0.0069  Score=56.06  Aligned_cols=43  Identities=16%  Similarity=0.128  Sum_probs=38.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .+.+++|+|+|+ |++|+.+++.+...|++|++.+|++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            468999999997 8999999999999999999999998876654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.56  E-value=0.0053  Score=56.00  Aligned_cols=79  Identities=20%  Similarity=0.282  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|+|+ |+||...++.+...|+ +|+++++++++++.+. ++    +. .. +  .|..+.+-.+++ .++. ..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga-~~-v--i~~~~~~~~~~v-~~~t-~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EY----GA-TD-I--INYKNGDIVEQI-LKAT-DG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HH----TC-CE-E--ECGGGSCHHHHH-HHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh----CC-ce-E--EcCCCcCHHHHH-HHHc-CC
Confidence            4789999996 8999999888888899 7999999887655332 22    22 11 1  244333322222 2221 12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            369999999875

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.55  E-value=0.0049  Score=57.90  Aligned_cols=81  Identities=21%  Similarity=0.346  Sum_probs=60.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..++..+
T Consensus        37 ~L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~  115 (434)
T 1tt5_B           37 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH  115 (434)
T ss_dssp             HHHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred             HhcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEE
Confidence            357889999998 8999999999999998 78898653                   14777788888888887777777


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..++.+..  .+++       ...|++|++.
T Consensus       116 ~~~i~~~~--~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          116 FNKIQDFN--DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             ESCGGGBC--HHHH-------TTCSEEEECC
T ss_pred             ecccchhh--HHHh-------cCCCEEEECC
Confidence            77665432  1222       2578888774

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.55  E-value=0.047  Score=49.24  Aligned_cols=113  Identities=23%  Similarity=0.254  Sum_probs=68.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc---C-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT---G-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~---~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++.|.|| |.+|.++|..|+..|. +|++.++++++++.....+....   . ..++... .|   .+.+         
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~al---------   80 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YEYL---------   80 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGGG---------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HHHH---------
Confidence            57889998 9999999999999998 99999999988876443433221   1 1223221 22   2211         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ..-|++|..+|....... +..   ..+..|.    -+.+.+.+.+.+..+.+.++++|-
T Consensus        81 --~~aD~VI~avg~p~k~g~-tr~---dl~~~n~----~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           81 --QNSDVVIITAGVPRKPNM-TRS---DLLTVNA----KIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             --TTCSEEEECCSCCCCTTC-CSG---GGHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             --CCCCEEEEcCCCCCCCCC-chh---hHHhhhH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence              368999999987543222 111   1223333    344555555555445566666654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.55  E-value=0.0067  Score=56.36  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|.|+ |++|...++.+...|+ +|+++++++++++.+.     ..+ .  ..  .|..+.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----~lG-a--~~--i~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-----DAG-F--ET--IDLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-----TTT-C--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----HcC-C--cE--EcCCCcchHHHHHHHHhC-C
Confidence            4889999997 9999999888877899 8999999988765432     222 2  22  344443221222222221 1


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ..+|++|.++|..
T Consensus       253 ~g~Dvvid~~g~~  265 (398)
T 2dph_A          253 PEVDCGVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECSCTT
T ss_pred             CCCCEEEECCCCc
Confidence            2699999999853

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.53  E-value=0.0037  Score=57.06  Aligned_cols=81  Identities=17%  Similarity=0.312  Sum_probs=60.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++.+.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..++..+
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            367889999997 8999999999999998 78888642                   35788888888888887777777


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..++.+  ...+++       ...|+||++.
T Consensus       112 ~~~~~~--~~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          112 TEDIEK--KPESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             CSCGGG--CCHHHH-------TTCSEEEEES
T ss_pred             ecccCc--chHHHh-------cCCCEEEEcC
Confidence            766543  112222       2567887653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.52  E-value=0.028  Score=50.49  Aligned_cols=115  Identities=15%  Similarity=0.153  Sum_probs=72.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++.|+|| |.+|.+++..|+..+.  .|++.|+++++++....++....+ ...+.+.. |  +.+.           +
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a-----------~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD-----------C   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------h
Confidence            57999999 9999999999998876  899999999888877777655421 02233332 2  2222           2


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..-|++|..+|...... .+   -.+.+..|..    ..+.+.+.+.+..+.+.|+++|-.
T Consensus        71 ~~aDvVii~ag~~~~~g-~~---R~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNP  123 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-ES---RLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANP  123 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             CCCCEEEECCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCc
Confidence            37899999999764322 11   1123344433    445555666666577888887653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.51  E-value=0.036  Score=49.77  Aligned_cols=116  Identities=16%  Similarity=0.182  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +..++.|+|| |.+|..++..|+..|.  .|++.++++++++....++....+  +..+.+.. |  +.+.         
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a---------   71 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD---------   71 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH---------
Confidence            3467899999 9999999999998884  899999998877765555443221  12233332 2  2222         


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        +..-|++|..+|...... .+   -...+..|.-    ..+.+.+.+.+..+.+.|+++|-
T Consensus        72 --~~~aDvVvi~ag~~~~~g-~~---r~dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           72 --CHDADLVVICAGAAQKPG-ET---RLDLVSKNLK----IFKSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             --GTTCSEEEECCCCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --hCCCCEEEECCCCCCCCC-Cc---HHHHHHHHHH----HHHHHHHHHHHhCCCcEEEEecC
Confidence              136899999999764322 11   1223344433    44555555655556788887654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.51  E-value=0.016  Score=50.46  Aligned_cols=89  Identities=16%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHH--------hhcCCccEEEEeccCCCHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIR--------SKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      +.+.++.|.|+ |.+|..+++.|.+.|++ |.+.+|++++.++..+++.        +...+.++.++.   .....+.+
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~   83 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAE   83 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHH
Confidence            33456888887 99999999999999998 8899999988776655421        111112233222   23445677


Q ss_pred             HHHHHhcCCCCccEEEEccccc
Q 019551          130 FANRFSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~  151 (339)
                      +++++.....+=.++|++.+..
T Consensus        84 v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHhhcCCCcEEEECCCCC
Confidence            7777765443334677776543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.50  E-value=0.0082  Score=54.52  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|+|+ |++|...++.+... |++|+++++++++++.+. +    .+...+  +  |..+ +..++ +.++.. .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~----lGa~~~--i--~~~~-~~~~~-v~~~t~-g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-E----VGADAA--V--KSGA-GAADA-IRELTG-G  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-H----TTCSEE--E--ECST-THHHH-HHHHHG-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----cCCCEE--E--cCCC-cHHHH-HHHHhC-C
Confidence            4889999998 99999988777666 789999999988766442 2    232222  2  2222 22222 222211 1


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            279999999984

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.48  E-value=0.0044  Score=55.55  Aligned_cols=68  Identities=13%  Similarity=0.196  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+|| |++|...++.+...|++|+.++ ++++.+.+. ++    + .. .++  |  |.+       ++   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l----G-a~-~v~--~--d~~-------~v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR----G-VR-HLY--R--EPS-------QV---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH----T-EE-EEE--S--SGG-------GC---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc----C-CC-EEE--c--CHH-------Hh---CC
Confidence            4889999999 9999999888888899999999 777766543 22    2 11 122  3  211       11   45


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            79999999885

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.44  E-value=0.0047  Score=57.75  Aligned_cols=59  Identities=17%  Similarity=0.199  Sum_probs=44.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      ..++|.|+ |-+|+.+++.|.+.|+.|++++++++..+...+.        .+.++.+|.++++.+++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHh
Confidence            46889997 8899999999999999999999999876655421        23345566666555443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.43  E-value=0.0053  Score=56.26  Aligned_cols=46  Identities=22%  Similarity=0.296  Sum_probs=40.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      ++.||+++|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            478999999997 8899999999999999999999998877665554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.42  E-value=0.034  Score=50.11  Aligned_cols=116  Identities=14%  Similarity=0.138  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ..++.|+|| |.+|.+++..|+..+.  .|++.|+++++++....++....+ ..++.+.. |  +.+.+          
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a~----------   74 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSDA----------   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHHh----------
Confidence            467999999 9999999999998876  899999999888877776654321 02233332 2  22221          


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                       ..-|++|..+|...... .+.   ...+..|..    ..+.+.+.+.+..+.+.|+++|-.
T Consensus        75 -~~aDvVii~ag~~~k~g-~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNP  127 (326)
T 2zqz_A           75 -KDADLVVITAGAPQKPG-ETR---LDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             -GGCSEEEECCCCC------CH---HHHHHHHHH----HHHHHHHHHHHHTCCSEEEECSSS
T ss_pred             -CCCCEEEEcCCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCc
Confidence             26899999999754322 121   223444443    445555556555577888887653

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.42  E-value=0.016  Score=52.11  Aligned_cols=114  Identities=19%  Similarity=0.117  Sum_probs=66.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++.|+|+ |.+|..++..|+..|.  +|++.|.++++++....++....+- ..+.+..   .+.+.           +
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~~a-----------~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYSD-----------V   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CCHHH-----------h
Confidence            46888898 9999999999999987  8999999988777655665443210 1222221   12221           2


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..+|...... .+   -.+.+..|+.-.    +.+.+.+.+..+.+.|+++|-
T Consensus        73 ~~aDvVii~~g~p~k~g-~~---r~dl~~~n~~i~----~~i~~~i~~~~p~a~viv~tN  124 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKPG-ET---RLDLAKKNVMIA----KEVTQNIMKYYNHGVILVVSN  124 (318)
T ss_dssp             TTCSEEEECCCC-------C---HHHHHHHHHHHH----HHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCCEEEEcCCCCCCCC-cC---HHHHHHhhHHHH----HHHHHHHHHhCCCcEEEEecC
Confidence            37899999999754221 11   223345555444    444444444446677777654

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.41  E-value=0.047  Score=48.95  Aligned_cols=116  Identities=16%  Similarity=0.109  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh---c-CCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSK---T-GNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~---~-~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+++.|.|+ |.+|.++|..|++.|. +|++.++++++++....++...   . ...++... .   |.+.+        
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d~~a~--------   70 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---DYADI--------   70 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---CGGGG--------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---CHHHh--------
Confidence            357889998 9999999999999998 9999999998777643333221   0 01122211 1   22111        


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG  200 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~  200 (339)
                         ...|++|.++|....... +..+   .+.-|.    ...+.+.+.+.+..+.+.++++|...
T Consensus        71 ---~~aDiVi~avg~p~~~g~-~r~d---~~~~~~----~i~~~i~~~i~~~~~~~iii~~sNp~  124 (317)
T 2ewd_A           71 ---SGSDVVIITASIPGRPKD-DRSE---LLFGNA----RILDSVAEGVKKYCPNAFVICITNPL  124 (317)
T ss_dssp             ---TTCSEEEECCCCSSCCSS-CGGG---GHHHHH----HHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred             ---CCCCEEEEeCCCCCCCCC-cHHH---HHHhhH----HHHHHHHHHHHHHCCCcEEEEeCChH
Confidence               268999999987653322 2221   122222    23444455554443556676666543

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.40  E-value=0.0055  Score=60.08  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=61.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK-------------------EKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++.+.+|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.++..++..+
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~   92 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY   92 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence            467789999998 9999999999999998 799988642                   4666777778777777778888


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ..+++.......++       ...|+||++.
T Consensus        93 ~~~i~~~~~~~~~~-------~~~DlVvda~  116 (640)
T 1y8q_B           93 HDSIMNPDYNVEFF-------RQFILVMNAL  116 (640)
T ss_dssp             ESCTTSTTSCHHHH-------TTCSEEEECC
T ss_pred             ecccchhhhhHhhh-------cCCCEEEECC
Confidence            77775432112222       3678888764

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.39  E-value=0.039  Score=49.00  Aligned_cols=41  Identities=24%  Similarity=0.272  Sum_probs=36.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS  103 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~  103 (339)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++++++..+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            57888888 899999999999999999999999988776533

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.37  E-value=0.02  Score=50.51  Aligned_cols=41  Identities=12%  Similarity=0.165  Sum_probs=36.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      +++.|.|++|.+|.++++.|.+.|++|++.+|++++.++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999988766554

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.31  E-value=0.053  Score=48.45  Aligned_cols=111  Identities=19%  Similarity=0.252  Sum_probs=71.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh---cC-CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSK---TG-NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.|+|| |.+|..++..++..|. .|++.++++++++....++...   .+ ..++... .|   .+.           +
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~a-----------~   65 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YED-----------M   65 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG-----------G
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HHH-----------h
Confidence            678898 9999999999998887 6999999998887766666543   11 1222221 22   221           1


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..+|....... +..   ..+..|    .-+.+.+.+.+.+..+.+.++++|-
T Consensus        66 ~~aD~Vi~~ag~~~k~G~-~r~---dl~~~n----~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           66 RGSDIVLVTAGIGRKPGM-TRE---QLLEAN----ANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             TTCSEEEECCSCCCCSSC-CTH---HHHHHH----HHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCCEEEEeCCCCCCCCC-cHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            368999999997653322 221   223333    3355666666665556778888764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.25  E-value=0.017  Score=51.88  Aligned_cols=42  Identities=14%  Similarity=0.256  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      ..+++.|.|+ |.+|..+|+.|++.|++|++.+|++++.++..
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4567888876 89999999999999999999999998776654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.23  E-value=0.0034  Score=56.68  Aligned_cols=39  Identities=28%  Similarity=0.398  Sum_probs=35.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      +++|+||+|++|...++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999998888999999999998876654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.19  E-value=0.017  Score=51.31  Aligned_cols=81  Identities=16%  Similarity=0.112  Sum_probs=53.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .+++.|.||.|.||.++|+.|.+.|++|++.+|+++.-   ..+.   ..+.++.++.+-..   .+.++++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~---~~~~---~~~aDvVilavp~~---~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV---AESI---LANADVVIVSVPIN---LTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG---HHHH---HTTCSEEEECSCGG---GHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC---HHHH---hcCCCEEEEeCCHH---HHHHHHHHHHhhcCC
Confidence            35788999899999999999999999999999987531   1111   12345666655433   366667776544332


Q ss_pred             ccEEEEcccc
Q 019551          141 VHVLVNNAGV  150 (339)
Q Consensus       141 id~lInnAG~  150 (339)
                      =.+|++.+++
T Consensus        92 ~~iv~~~~sv  101 (298)
T 2pv7_A           92 NMLLADLTSV  101 (298)
T ss_dssp             TSEEEECCSC
T ss_pred             CcEEEECCCC
Confidence            2356665543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.16  E-value=0.0029  Score=57.42  Aligned_cols=71  Identities=7%  Similarity=0.148  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .++++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+        ..+.++.+|.+|++.++++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            468999997 8999999999999999 999999998765 321        2467889999999887654      1236


Q ss_pred             ccEEEEcc
Q 019551          141 VHVLVNNA  148 (339)
Q Consensus       141 id~lInnA  148 (339)
                      .|.+|...
T Consensus       178 a~~vi~~~  185 (336)
T 1lnq_A          178 ARAVIVDL  185 (336)
T ss_dssp             EEEEEECC
T ss_pred             ccEEEEcC
Confidence            78888655

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.13  E-value=0.018  Score=50.78  Aligned_cols=85  Identities=16%  Similarity=0.145  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHH--------HhhcCCccEEEEeccCCCHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA---TVYMVCRSKEKGETALSAI--------RSKTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~---~Vvl~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      .+++.|.|+ |-+|.++++.|++.|+   +|++.+|+++++++..++.        .+...+.++.++.+   .++.+++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356778887 8999999999999998   8999999999887766532        11112334555554   3456667


Q ss_pred             HHHHHhcC-CCCccEEEEccc
Q 019551          130 FANRFSLK-NKPVHVLVNNAG  149 (339)
Q Consensus       130 ~~~~~~~~-~~~id~lInnAG  149 (339)
                      +++++... ..+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77766543 222226777654

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=96.13  E-value=0.0069  Score=57.56  Aligned_cols=128  Identities=14%  Similarity=0.140  Sum_probs=72.4

Q ss_pred             CCEEEEEcCCC-chHHHHHHHHHHC----CCEEEEEecCchhHHHHHHHHHhh--cCCccEEEEeccCCCHHHHHHHHHH
Q 019551           61 GKNCVVTGANA-GIGYATAEGLASR----GATVYMVCRSKEKGETALSAIRSK--TGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        61 ~k~vlITGas~-gIG~a~a~~l~~~----G~~Vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ..++.|.||++ |.|.++|..|++.    |.+|++.++++++++.........  .......+...  +|.+   +.++ 
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t--tD~~---eal~-   76 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DVII-   76 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HHHT-
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE--CCHH---HHhC-
Confidence            35788999988 8899999999864    889999999998877644433221  11112222211  2332   2222 


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChh------h----hhhhhhh--------hhhHHHHHHHHHHHHHHhhCCCCEEEE
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSE------G----FELNFAV--------NVLGTYTITESMVPLLEKAAPDARVIT  195 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~------~----~~~~~~v--------N~~~~~~l~~~~l~~m~~~~~~~~Iv~  195 (339)
                            .-|+||..+|..........+      +    +.+....        -..-+.-+.+.+.+.+.+..+.+.+++
T Consensus        77 ------dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~  150 (480)
T 1obb_A           77 ------DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQ  150 (480)
T ss_dssp             ------TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             ------CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEE
Confidence                  689999999863211000000      0    0111000        123344566677777777767788877


Q ss_pred             EcCcc
Q 019551          196 VSSGG  200 (339)
Q Consensus       196 vsS~~  200 (339)
                      +|-..
T Consensus       151 ~TNPv  155 (480)
T 1obb_A          151 AANPI  155 (480)
T ss_dssp             CSSCH
T ss_pred             eCCcH
Confidence            77543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.07  E-value=0.05  Score=48.84  Aligned_cols=114  Identities=20%  Similarity=0.237  Sum_probs=67.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|.|+ |.+|.++|..|++.|.  +|++.++++++++.....+....+ .....+..   ++.+.+           .
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~~-----------~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYADL-----------K   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHHh-----------C
Confidence            5788998 9999999999999998  999999998877765544432211 00111111   232221           2


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSG  199 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~  199 (339)
                      ..|++|.+++....... +  . ...+..|..    +.+.+.+.+.+..+.+.|++++-.
T Consensus        67 ~aDvViiav~~~~~~g~-~--r-~dl~~~n~~----i~~~i~~~i~~~~~~~~ii~~tNp  118 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKPGE-T--R-LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTNP  118 (319)
T ss_dssp             TCSEEEECCCCCCCSSC-C--H-HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             CCCEEEEccCCCCCCCC-C--H-HHHHHHHHH----HHHHHHHHHHhhCCCeEEEEeCCc
Confidence            68999999986542211 1  1 122333433    334444455443355677776543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.00  E-value=0.021  Score=54.46  Aligned_cols=43  Identities=30%  Similarity=0.322  Sum_probs=36.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      +++.|.|+ |-+|.++|..|++.|++|++.+|+++.+++..+.+
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i   48 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGI   48 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            45666666 89999999999999999999999999888776543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.98  E-value=0.02  Score=51.94  Aligned_cols=79  Identities=22%  Similarity=0.210  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++++|.|| |++|...+..+... |++|+.+++++++++.+.     ..+. ...   .|..+.+..+++.+..  ..
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-----~~Ga-~~~---i~~~~~~~~~~v~~~t--~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-----KIGA-DVT---INSGDVNPVDEIKKIT--GG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-----HTTC-SEE---EEC-CCCHHHHHHHHT--TS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-----hcCC-eEE---EeCCCCCHHHHhhhhc--CC
Confidence            4889999987 78887777777765 789999999988755332     2222 222   3444444333332221  12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|.++.++|.
T Consensus       231 ~g~d~~~~~~~~  242 (348)
T 4eez_A          231 LGVQSAIVCAVA  242 (348)
T ss_dssp             SCEEEEEECCSC
T ss_pred             CCceEEEEeccC
Confidence            357888887763

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.95  E-value=0.0096  Score=52.31  Aligned_cols=38  Identities=34%  Similarity=0.441  Sum_probs=34.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      ++.||+++|.|+++-+|+.+|..|.+.|++|.++.|+.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            47899999999999899999999999999999988753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.90  E-value=0.014  Score=52.08  Aligned_cols=42  Identities=29%  Similarity=0.336  Sum_probs=37.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET  100 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~  100 (339)
                      .+.|++++|.|+ |+||+++|+.+...|++|++.+|+.++.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            378999999997 999999999999999999999999876543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.89  E-value=0.011  Score=56.13  Aligned_cols=73  Identities=14%  Similarity=0.184  Sum_probs=57.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++|.|+ |-+|+.+|+.|.++|++|++++++++.++.+.+++       .+..+.+|.++++-++++--      ..-|
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi------~~ad   70 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGA------QDAD   70 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTT------TTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCC------CcCC
Confidence            5888888 79999999999999999999999998877655443       46678899999988776521      3577


Q ss_pred             EEEEccc
Q 019551          143 VLVNNAG  149 (339)
Q Consensus       143 ~lInnAG  149 (339)
                      ++|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            8876544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.87  E-value=0.067  Score=48.85  Aligned_cols=88  Identities=9%  Similarity=0.074  Sum_probs=56.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH----------HHhhcCCccEEEEeccCCCHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA----------IRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~----------l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      ++++++.|.| .|-+|..+|+.|++.|++|++.+|++++.++..+.          +.+.....++.++.+  .+. .++
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~v--p~~-~v~   95 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMV--PAA-VVD   95 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECS--CGG-GHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeC--CHH-HHH
Confidence            4567888888 58999999999999999999999998877654321          111111113444333  333 566


Q ss_pred             HHHHHHhcCCCCccEEEEcccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~  150 (339)
                      ++++.+.....+=+++|++...
T Consensus        96 ~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           96 SMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHhhCCCCCEEEeCCCC
Confidence            6777766554444567766543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.86  E-value=0.0047  Score=54.44  Aligned_cols=43  Identities=33%  Similarity=0.435  Sum_probs=37.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      +.+++++|.|+ |++|+++++.|.+.|++|++.+|+.++.++..
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            56899999997 79999999999999999999999987765443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.85  E-value=0.032  Score=46.85  Aligned_cols=75  Identities=13%  Similarity=0.239  Sum_probs=50.8

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +..+++.|.| .|.+|.++|+.|++.|++|++.+|+++           ...+.++.++.+-   ...++++++++....
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQYATQL   81 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHTHHHH
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHHHHhc
Confidence            5567899999 599999999999999999999999876           1123455555543   566777777665432


Q ss_pred             CCccEEEEccc
Q 019551          139 KPVHVLVNNAG  149 (339)
Q Consensus       139 ~~id~lInnAG  149 (339)
                      . =.++|+++.
T Consensus        82 ~-~~~vi~~~~   91 (209)
T 2raf_A           82 K-GKIVVDITN   91 (209)
T ss_dssp             T-TSEEEECCC
T ss_pred             C-CCEEEEECC
Confidence            2 235666543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.85  E-value=0.14  Score=45.58  Aligned_cols=112  Identities=16%  Similarity=0.129  Sum_probs=67.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhh---c-CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSK---T-GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~---~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.|.|+ |.+|..+|..|++.  |.+|++.++++++++....++...   . ...++...    +|.+++         
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~~l---------   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS----NDYADT---------   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE----SCGGGG---------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC----CCHHHH---------
Confidence            5788998 99999999999985  789999999998877654444321   1 11122211    222211         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ...|++|.++|......    ..-...+..|..-...+.+.    +.+..+.+.|++++-
T Consensus        68 --~~aDvViiav~~p~~~g----~~r~dl~~~n~~i~~~i~~~----i~~~~~~~~viv~tN  119 (310)
T 1guz_A           68 --ANSDIVIITAGLPRKPG----MTREDLLMKNAGIVKEVTDN----IMKHSKNPIIIVVSN  119 (310)
T ss_dssp             --TTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHH----HHHHCSSCEEEECCS
T ss_pred             --CCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHH----HHHhCCCcEEEEEcC
Confidence              36899999998543211    11223445555444444444    443335677777754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.81  E-value=0.0043  Score=55.64  Aligned_cols=83  Identities=25%  Similarity=0.246  Sum_probs=54.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.||+++|.|++.=+|+.+|+.|+..|++|.+++|+..++.+..+++.    ........+..++++++.+.+.     
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la----~~~~~~t~~~~t~~~~L~e~l~-----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSL-----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS----CCCCEEEEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh----hhcccccccccccHhHHHHHhc-----
Confidence            4889999999998888999999999999999999998432211111111    0000111111134566776666     


Q ss_pred             CCCccEEEEccccc
Q 019551          138 NKPVHVLVNNAGVL  151 (339)
Q Consensus       138 ~~~id~lInnAG~~  151 (339)
                        .-|+||...|..
T Consensus       245 --~ADIVIsAtg~p  256 (320)
T 1edz_A          245 --DSDVVITGVPSE  256 (320)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --cCCEEEECCCCC
Confidence              479999998864

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.81  E-value=0.17  Score=41.94  Aligned_cols=76  Identities=8%  Similarity=-0.009  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .++++|-.|++.|.   ++..+++.|.+|+.++.+++.++.+.+.+....-..++.++..|+.+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            46789999987662   4455555689999999999888877776654432236899999986521          1224


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      ..|+++.+.
T Consensus       122 ~~D~v~~~~  130 (204)
T 3njr_A          122 LPEAVFIGG  130 (204)
T ss_dssp             CCSEEEECS
T ss_pred             CCCEEEECC
Confidence            689998765

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.78  E-value=0.024  Score=48.92  Aligned_cols=78  Identities=14%  Similarity=0.134  Sum_probs=56.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++.|.|++|.+|+.+++.+.+. |+.|+.+....+.+++...    .  +  .. +.+|+++++.+.+.+....+.  .+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~--~--~D-vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G--N--TE-VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T--T--CC-EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c--C--Cc-EEEEccChHHHHHHHHHHHHc--CC
Confidence            5889999999999999999876 8998755544444443321    1  1  22 447999999888888776665  57


Q ss_pred             cEEEEccccc
Q 019551          142 HVLVNNAGVL  151 (339)
Q Consensus       142 d~lInnAG~~  151 (339)
                      ++||...|..
T Consensus        71 ~~VigTTG~~   80 (245)
T 1p9l_A           71 HAVVGTTGFT   80 (245)
T ss_dssp             EEEECCCCCC
T ss_pred             CEEEcCCCCC
Confidence            8888877744

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.78  E-value=0.034  Score=50.29  Aligned_cols=79  Identities=24%  Similarity=0.267  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|+|+|+ ||+|...++.+...|++ ++++++++++++.+. +    .+. ...   .|..+.+ ..+..+.+.+ .
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~----lGa-~~~---i~~~~~~-~~~~~~~~~~-~  227 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-S----FGA-MQT---FNSSEMS-APQMQSVLRE-L  227 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H----TTC-SEE---EETTTSC-HHHHHHHHGG-G
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-H----cCC-eEE---EeCCCCC-HHHHHHhhcc-c
Confidence            5889999987 89999999888889986 567788887655332 2    232 222   2333322 2233333332 3


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ...|+++.++|.
T Consensus       228 ~g~d~v~d~~G~  239 (346)
T 4a2c_A          228 RFNQLILETAGV  239 (346)
T ss_dssp             CSSEEEEECSCS
T ss_pred             CCcccccccccc
Confidence            468999998873

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.75  E-value=0.15  Score=46.78  Aligned_cols=117  Identities=14%  Similarity=0.003  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC--E---EEEEecC----chhHHHHHHHHHhhc-CC-ccEEEEeccCCCHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA--T---VYMVCRS----KEKGETALSAIRSKT-GN-ENVHLELCDLSSITEIKS  129 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~--~---Vvl~~r~----~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~  129 (339)
                      ..+|.|+||+|.||.+++..|+..+.  .   |++.+.+    .++++....++.... +- ..+.+ . + .+.+.   
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i-~-~-~~y~~---  105 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-G-I-DPYEV---  105 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-E-S-CHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE-e-c-CCHHH---
Confidence            45799999999999999999998865  2   7775543    344566666665432 11 11221 1 1 11111   


Q ss_pred             HHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-CCCCEEEEEcCc
Q 019551          130 FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA-APDARVITVSSG  199 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~~~~Iv~vsS~  199 (339)
                              +..-|++|..||...... .+   -.+.++.|..    +.+...+.+.+. .+.+.|+.+|..
T Consensus       106 --------~~daDvVVitag~prkpG-~t---R~DLl~~N~~----I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          106 --------FEDVDWALLIGAKPRGPG-ME---RAALLDINGQ----IFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             --------TTTCSEEEECCCCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             --------hCCCCEEEEcCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCc
Confidence                    137899999999754322 22   2334556653    445555556553 356888887753

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.75  E-value=0.027  Score=50.31  Aligned_cols=41  Identities=20%  Similarity=0.134  Sum_probs=35.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      .+++.|.|. |-+|..+|+.|++.|++|++.+|++++.++..
T Consensus        21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            357888875 89999999999999999999999998877654

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=95.75  E-value=0.025  Score=57.54  Aligned_cols=80  Identities=21%  Similarity=0.349  Sum_probs=61.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEEe
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLEL  118 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  118 (339)
                      +.+.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..++..+.
T Consensus       409 l~~~~vlvvG~-GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~  487 (805)
T 2nvu_B          409 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  487 (805)
T ss_dssp             HHTCCEEEECC-SSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            37889999987 8999999999999998 79999874                   246777778888888877787777


Q ss_pred             ccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          119 CDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      .++.+..  .++++       ..|+||.+.
T Consensus       488 ~~~~~~~--~~~~~-------~~d~vv~~~  508 (805)
T 2nvu_B          488 NKIQDFN--DTFYR-------QFHIIVCGL  508 (805)
T ss_dssp             SCGGGSC--HHHHH-------TCSEEEECC
T ss_pred             ccccccH--HHHHh-------cCCEEEECC
Confidence            7776432  23333       578888774

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.73  E-value=0.018  Score=51.08  Aligned_cols=41  Identities=29%  Similarity=0.386  Sum_probs=36.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      ++.||+++|.|+ |+||+++|+.+...|++|++.+|+.++.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            378999999996 89999999999999999999999987644

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.71  E-value=0.015  Score=50.79  Aligned_cols=45  Identities=27%  Similarity=0.414  Sum_probs=38.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      ++| +++|.|+ |++|+++++.|.+.|++|++.+|+.++.++..+++
T Consensus       115 l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          115 LKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            678 8999997 88999999999999999999999988766655443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-37
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-36
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-32
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-31
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-31
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-31
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-30
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-30
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-30
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-30
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-29
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-29
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-29
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-29
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-29
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-29
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-29
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-28
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-28
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-28
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-28
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-27
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-27
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-27
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-27
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-27
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	7e-26
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	9e-26
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-25
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-25
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-24
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	6e-24
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-23
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-23
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-22
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-22
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	7e-22
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-21
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-21
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-21
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-21
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-20
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-20
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-20
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-19
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-18
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-18
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-18
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-17
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-17
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-17
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-15
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-14
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-10
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-09
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	6e-09
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-06
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-06
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.001
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.003
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-37
 Identities = 58/283 (20%), Positives = 95/283 (33%), Gaps = 52/283 (18%)

Query: 65  VVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS 123
           +VTG N GIG A    L       V +  R   +G+ A+  ++++  +        D+  
Sbjct: 7   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS--PRFHQLDIDD 64

Query: 124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMV 181
           +  I++  +    +   + VLVNNAG+              E+    N  GT  +   ++
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 182 PLLEKAAPDARVITVSS-----------------------------GGMYTAHLTDDLEF 212
           PL++      RV+ VSS                             G M           
Sbjct: 125 PLIKPQG---RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 213 NSGSFDGMEQYARNKRVQVALTE----KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF 268
           +         Y   K     L+     K SE  K   I   +  PGW  T          
Sbjct: 182 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT-- 239

Query: 269 NERFAGNLRTSEEGADTVLWLALQPKE-KLVSGSFYFDRAEAP 310
                   ++ EEGA+T ++LAL P + +   G F  ++    
Sbjct: 240 --------KSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 274

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (324), Expect = 5e-36
 Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 20/246 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R   +  +VTGA+ GIG A A  L  +G  V    R+    E   +  +S      +   
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 66

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYT 175
            CDLS+  +I S  +    ++  V + +NNAG+   + L+  ++ G++  F VNVL    
Sbjct: 67  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126

Query: 176 ITESMVP-LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            T      + E+   D  +I ++S   +                    Y+  K    ALT
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVL----------PLSVTHFYSATKYAVTALT 176

Query: 235 EKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVL 287
           E   +  +E    I    + PG  ET    K      E+ A           E+ A+ V+
Sbjct: 177 EGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI 236

Query: 288 WLALQP 293
           ++   P
Sbjct: 237 YVLSTP 242

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  120 bits (302), Expect = 1e-32
 Identities = 53/265 (20%), Positives = 95/265 (35%), Gaps = 34/265 (12%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVHL 116
           R   K  ++TG++ GIG ATA   A  GA V +  R  E+ E     I +   +E NV+ 
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGV------LENNRLITSEGFELNFAVNV 170
            + D+++        +    K   + +LVNNAG        +     + E ++    +N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
                +T+  VP L     +   I+  + G+              +      Y+  K   
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGL-------------HATPDFPYYSIAKAAI 168

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETP---------GVAKSMPSFNERFA-----GNL 276
              T   +    + GI   S+ PG   T            +K   S           G +
Sbjct: 169 DQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVM 228

Query: 277 RTSEEGADTVLWLALQPKEKLVSGS 301
              ++ A+ + +LA +     + G 
Sbjct: 229 GQPQDIAEVIAFLADRKTSSYIIGH 253

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 1e-31
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 35/249 (14%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + GK  +VTGA  GIG A AE L  +GA V +V  + E G    +A+  +   +      
Sbjct: 1   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITE 178
           CD++   +++    +       + +LVNNAGV         + +E    +N++   + T 
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV------NNEKNWEKTLQINLVSVISGTY 114

Query: 179 SMVPLLEK--AAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
             +  + K        +I +SS                        Y  +K   V  T  
Sbjct: 115 LGLDYMSKQNGGEGGIIINMSSLAGLMP------------VAQQPVYCASKHGIVGFTRS 162

Query: 237 W--SEMYKEKGIGFYSMHPGWAETPGVAK--------SMPSFNERFA-----GNLRTSEE 281
              +      G+   ++ PG+  T  +              + +          +     
Sbjct: 163 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPL 222

Query: 282 GADTVLWLA 290
            A+ ++ L 
Sbjct: 223 IANGLITLI 231

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  116 bits (291), Expect = 2e-31
 Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 28/256 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGAT--VYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              + VVTGAN GIG    + L        +    R  EK     S       +  VH+ 
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-----DSRVHVL 56

Query: 118 LCDLSSITEIKSFANRFS--LKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLG 172
              ++    + +F ++    + +  + +L+NNAGVL +                 VN   
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG-----MEQYARNK 227
              +T+ ++PLL+ AA       +S        ++  L   + +  G     +  Y  +K
Sbjct: 117 VVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSK 176

Query: 228 RVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVL 287
                     +   K+  +   +  PGW +T    K+             T E+    ++
Sbjct: 177 AAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAA----------LTVEQSTAELI 226

Query: 288 WLALQPKEKLVSGSFY 303
               +      +G F+
Sbjct: 227 SSFNKLDNS-HNGRFF 241

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  116 bits (291), Expect = 3e-31
 Identities = 54/246 (21%), Positives = 78/246 (31%), Gaps = 34/246 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              GK  +VTG   GIG A A+  A  GA V +     E  E A        G       
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----EAIGGAFFQ-- 54

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             DL    E   F    +     V VLVNNA +        +    +     VN+     
Sbjct: 55  -VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMH 113

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           ++      + K    A V   S  G++             +      Y  +K   V LT 
Sbjct: 114 LSALAAREMRKVGGGAIVNVASVQGLF-------------AEQENAAYNASKGGLVNLTR 160

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----------GNLRTSEEGAD 284
             +       I   ++ PG   T  V +++    +                L   EE A+
Sbjct: 161 SLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAE 220

Query: 285 TVLWLA 290
            VL+LA
Sbjct: 221 AVLFLA 226

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  115 bits (289), Expect = 5e-31
 Identities = 49/242 (20%), Positives = 86/242 (35%), Gaps = 26/242 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ K  V+TG   GIG A AE  A  GA + +          A +AIR+      V   
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNL--GRRVLTV 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
            CD+S   ++++F  +         +LVNNAG+        +T E ++  F +NV   + 
Sbjct: 58  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 117

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + ++ VP +++      +   S+                   +    Y   K   +  T 
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTYWL-------------KIEAYTHYISTKAANIGFTR 164

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEEGADTVLW 288
             +    + GI   ++ P    T     S  S               L+   +      +
Sbjct: 165 ALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF 224

Query: 289 LA 290
           LA
Sbjct: 225 LA 226

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  115 bits (288), Expect = 1e-30
 Identities = 54/265 (20%), Positives = 93/265 (35%), Gaps = 34/265 (12%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE-NVHL 116
           R   K  ++TG++ GIG  TA   A  GA V +  RS E+ E     I     +E  V+ 
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS------EGFELNFAVNV 170
            + D+++        N    +   + VLVNNAG    +   T+      + +     +N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
                +T+ + P L  +  +   ++    G               +      YA  K   
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGP-------------QAQPDFLYYAIAKAAL 168

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETP---------GVAKSMPSFNERFA-----GNL 276
              T   +    + GI   S+ PG  ET            ++   +F          G  
Sbjct: 169 DQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAA 228

Query: 277 RTSEEGADTVLWLALQPKEKLVSGS 301
              E  A+ +L+LA +     + G 
Sbjct: 229 GKPEHIANIILFLADRNLSFYILGQ 253

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  113 bits (285), Expect = 2e-30
 Identities = 48/242 (19%), Positives = 85/242 (35%), Gaps = 31/242 (12%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
              G   +VTGA  GIG  T + L + GA V  V R+     +             +   
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPV 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             DL      +           PV +LVNNA ++       +T E F+ +F+VN+   + 
Sbjct: 56  CVDLGDWDATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 111

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++ +   +        ++ VSS   +              F  +  Y+  K     LT+
Sbjct: 112 VSQMVARDMINRGVPGSIVNVSSMVAHVT------------FPNLITYSSTKGAMTMLTK 159

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA-----GNLRTSEEGADTVLW 288
             +       I   S++P    T    K  + P F  +             E+  +++L+
Sbjct: 160 AMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF 219

Query: 289 LA 290
           L 
Sbjct: 220 LL 221

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 4e-30
 Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 34/247 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R  GK  VVTG   GIG        + GA V +  + +  G      +            
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFI 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
           LCD++   ++K+  +    +   +  +VNNAG     +     +++GF     +N+LGTY
Sbjct: 57  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
           T+T+  +P L K+     VI +SS                        Y   K    A+T
Sbjct: 117 TLTKLALPYLRKSQ--GNVINISSLVGAIG------------QAQAVPYVATKGAVTAMT 162

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETP---GVAKSMPSFNERFA--------GNLRTSEEGA 283
           +  +      G+    + PG   TP    +A  MP               G +    E  
Sbjct: 163 KALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVG 222

Query: 284 DTVLWLA 290
              ++LA
Sbjct: 223 AAAVFLA 229

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  113 bits (283), Expect = 4e-30
 Identities = 48/244 (19%), Positives = 81/244 (33%), Gaps = 13/244 (5%)

Query: 54  DMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNEN 113
                   K  +VTG N GIG A    +A+ GA V ++ RS          +  + G   
Sbjct: 2   GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-K 60

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
                CD+S+   +     +      P+  L+ NAGV        +T E F   + VNV 
Sbjct: 61  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVF 120

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G +    ++  L  +      ++  SS      +     + +         Y  +K    
Sbjct: 121 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-----QSSLNGSLTQVFYNSSKAACS 175

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTV 286
            L +  +  +   GI   ++ PG+  T   A       +  A           EE     
Sbjct: 176 NLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQA 235

Query: 287 LWLA 290
           + L 
Sbjct: 236 ILLL 239

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 1e-29
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 25/249 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            + G+  ++TGA  GIG  TA   A   + + +   +K   E   +  +       VH  
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTF 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA--GVLENNRLITSEGFELNFAVNVLGTYT 175
           + D S+  +I S A +   +   V +LVNNA      +         E  F VNVL  + 
Sbjct: 62  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
            T++ +P + K      V   S+ G               S   +  Y  +K   V   +
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHV-------------SVPFLLAYCSSKFAAVGFHK 168

Query: 236 KWSEM---YKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ 292
             ++     +  G+    + P +  T  +     S      G     EE  + ++   L 
Sbjct: 169 TLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL-----GPTLEPEEVVNRLMHGILT 223

Query: 293 PKEKLVSGS 301
            ++ +   S
Sbjct: 224 EQKMIFIPS 232

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  112 bits (280), Expect = 1e-29
 Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 29/247 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ K  ++TG   GIG  TA+     GA V +   + + G+   + I S    + +   
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFV 59

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGT 173
            CD++   ++++  +    K+  + ++  N GVL           +E F+    +NV G 
Sbjct: 60  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 119

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + + +    ++  A   + V T S                         Y   K   + L
Sbjct: 120 FLVAKHAARVMIPAKKGSIVFTASISSFT------------AGEGVSHVYTATKHAVLGL 167

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA----------GNLRTSEEGA 283
           T        E GI    + P    +P +       + R            G L  +E+ A
Sbjct: 168 TTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA 227

Query: 284 DTVLWLA 290
           D V +LA
Sbjct: 228 DAVAYLA 234

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  112 bits (281), Expect = 1e-29
 Identities = 50/263 (19%), Positives = 91/263 (34%), Gaps = 32/263 (12%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-ENVHL 116
           R  GK+ ++TG++ GIG + A   A  GA V +  R++++ E     I       E ++ 
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLG 172
            + D++  +      N    K   + +LVNNAG    +         E ++  F +N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
              +T+     L K   +   ++    G               +  G   YA  K     
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGP-------------QAHSGYPYYACAKAALDQ 167

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA--------------GNLRT 278
            T   +    + G+   S+ PG   T  +                          G+   
Sbjct: 168 YTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK 227

Query: 279 SEEGADTVLWLALQPKEKLVSGS 301
            EE A+ +++LA +     + G 
Sbjct: 228 PEEIANIIVFLADRNLSSYIIGQ 250

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  111 bits (279), Expect = 2e-29
 Identities = 52/247 (21%), Positives = 93/247 (37%), Gaps = 33/247 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  +VTG  +G+G    + L   GA V     ++  G+   + +      E     
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFV 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D+SS  +          +   ++VLVNNAG+L    +     E F     +N    + 
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFI 117

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
             +  +  +++      +I ++S   +               +    Y+ +K    ALT 
Sbjct: 118 GCQQGIAAMKE--TGGSIINMASVSSWLPI------------EQYAGYSASKAAVSALTR 163

Query: 236 KWSEMYKEKG--IGFYSMHPGWAETPGVAKSMPSFNERF----------AGNLRTSEEGA 283
             +   +++G  I   S+HP    TP +  S+P    +           AG     E  A
Sbjct: 164 AAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA 223

Query: 284 DTVLWLA 290
             VL+LA
Sbjct: 224 QLVLFLA 230

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  111 bits (278), Expect = 2e-29
 Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 27/244 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG   GIG A A      GA V +  R  + GE A  ++ +    + +   
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFF 59

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D S         +       PV  LVNNAG+  N  +   T+  +    AVN+ G + 
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
            T   +  ++     A +I +SS   +                 +  Y  +K     +++
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVG------------DPSLGAYNASKGAVRIMSK 167

Query: 236 KWS--EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEEGADTV 286
             +     K+  +   ++HPG+ +TP V   +P   E  +       G++    + A   
Sbjct: 168 SAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYIC 226

Query: 287 LWLA 290
           ++LA
Sbjct: 227 VYLA 230

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  111 bits (278), Expect = 2e-29
 Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 28/244 (11%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EG   +VTG + GIGY   E LAS GA+VY   R++++    L+  RSK         +C
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS--VC 64

Query: 120 DLSSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
           DLSS +E +   N  +   +  +++LVNNAG++        T E + L  ++N    Y +
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           +    P L+ +     V   S  G                       A  K     LT  
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGAL------------AVPYEAVYGA-TKGAMDQLTRC 171

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFA--------GNLRTSEEGADTV 286
            +  + +  I    + PG   T  V  ++  P   E             +   +E A  V
Sbjct: 172 LAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMV 231

Query: 287 LWLA 290
            +L 
Sbjct: 232 AFLC 235

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  111 bits (278), Expect = 2e-29
 Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 24/248 (9%)

Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           F  +++  R++GK  ++TGA AGIG   A   A+ GA+V +   + +     +  I+   
Sbjct: 2   FNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-ITSEGFELNFAV 168
           G        CD++S  E+ + A+    K   V +LVNNAG        +    F   + +
Sbjct: 60  G--QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYEL 117

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
           NV   + +++ + P +EK      +   S                      M  YA +K 
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI-------------NMTSYASSKA 164

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNERFA-----GNLRTSEEG 282
               L    +    EK I    + PG   T  +   + P   ++         L   ++ 
Sbjct: 165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDI 224

Query: 283 ADTVLWLA 290
           A+  L+L 
Sbjct: 225 ANAALFLC 232

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  109 bits (274), Expect = 1e-28
 Identities = 49/240 (20%), Positives = 83/240 (34%), Gaps = 24/240 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           + K  +VTG   GIG+A  E  A  GA ++   R++ +    LS  + K     V   +C
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVC 64

Query: 120 DLSSITEIKSFANRFSLK-NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
           D S   E +      S      + +L+NN G + +      T+E F  + + N+   Y +
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 124

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           ++   PLL+              G         +     +  G    A  K     L   
Sbjct: 125 SQLAHPLLKA------------SGCGNIIFMSSIAGVVSASVGSIYSA-TKGALNQLARN 171

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGADTVLWLA 290
            +  +   GI   ++ P    TP          ++        G     EE +  V +L 
Sbjct: 172 LACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC 231

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 22/241 (9%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           + G+  +VTG + G+G+  A+GLA  G +V +  R+ E+   A   +  K G E +    
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR- 61

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
           CD+S+  E+K        K   +  +VN AG+   +       + F     VN+ GTY +
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
                 LL ++   + +   S                  +   +  YA +K    +LT+ 
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEE------------VTMPNISAYAASKGGVASLTKA 169

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFA-----GNLRTSEEGADTVLWL 289
            ++ +   GI    + PGW  T         P   +        G     E+     ++L
Sbjct: 170 LAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFL 229

Query: 290 A 290
           A
Sbjct: 230 A 230

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 47/245 (19%), Positives = 83/245 (33%), Gaps = 31/245 (12%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M+  + G+  +VTGA  GIG  T + L + GA V  V R++   ++ +           +
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGI 54

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
                DL      +           PV +LVNNA V        +T E F+ +F VN+  
Sbjct: 55  EPVCVDLGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
              +++ +   L        ++ VSS                 +      Y   K     
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------AVTNHSVYCSTKGALDM 158

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEEGADT 285
           LT+  +       I   +++P    T     +    ++          G     E   + 
Sbjct: 159 LTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNA 218

Query: 286 VLWLA 290
           +L+L 
Sbjct: 219 ILFLL 223

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 29/243 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            +  KN +   A  GIG  T+  L  R    +++    E    AL+ +++     N+   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFH 60

Query: 118 LCDLS-SITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTI 176
             D++  + E K    +   + K V +L+N AG+      +     E   A+N  G    
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI------LDDHQIERTIAINFTGLVNT 114

Query: 177 TESMVPLLE--KAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
           T +++   +  K  P   +  + S   + A               +  Y+ +K   V+ T
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFNA------------IHQVPVYSASKAAVVSFT 162

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFAGN-----LRTSEEGADTVL 287
              +++    G+  YS++PG   TP V    S      R A        +TSE+     +
Sbjct: 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV 222

Query: 288 WLA 290
              
Sbjct: 223 KAI 225

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  106 bits (265), Expect = 2e-27
 Identities = 48/239 (20%), Positives = 83/239 (34%), Gaps = 26/239 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
            GK  ++TG   G+G   A    + GA V +     E+G      +      +    +  
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHL 58

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYTIT 177
           D++   + +        +   V  LVNNAG+     L T   E F     +N+ G +   
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           ++++P ++ A   + V   S+ G+                     Y  +K     L++  
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLA-------------LTSSYGASKWGVRGLSKLA 165

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNL------RTSEEGADTVLWLA 290
           +       I   S+HPG   TP  A++     E    N           E A  V+ L 
Sbjct: 166 AVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 2e-27
 Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 28/247 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS---KTGNENV 114
            ++G+  +VTG   GIG A  + L   G+ V +  R  E+ ++A   +++    T    V
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
               C++ +  E+ +           ++ LVNN G    +    I+S+G+      N+ G
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
           T+ + +++     K    + V  +                    F         +     
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVP--------------TKAGFPLAVHSGAARAGVYN 174

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF---------AGNLRTSEEGA 283
           LT+  +  +   GI    + PG   +    ++  S+ + F         A  +   EE +
Sbjct: 175 LTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS 234

Query: 284 DTVLWLA 290
             V +L 
Sbjct: 235 SVVCFLL 241

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  105 bits (264), Expect = 2e-27
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 29/249 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R   +  ++TG  +G+G ATA  LA+ GA + +V  S E  E + +A+     +  V   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS---EGFELNFAVNVLGTY 174
           + D+S   +++++    + +   +    NNAG+        S     F+   ++N+ G +
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
              E ++ ++ +      V T S GG+                     YA  K   V LT
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIR-------------GIGNQSGYAAAKHGVVGLT 167

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------------GNLRTSEE 281
              +  Y   GI   ++ PG   TP V  SM   +                      + E
Sbjct: 168 RNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE 227

Query: 282 GADTVLWLA 290
            A  V +L 
Sbjct: 228 IAAVVAFLL 236

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  105 bits (263), Expect = 2e-27
 Identities = 52/240 (21%), Positives = 89/240 (37%), Gaps = 28/240 (11%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++ K  ++TGA  GIG AT E  A  GA +      +     A  A+         H  
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPV 54

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           + D++    ++            +  +V+ AG+  +N    +  E +EL   VN+ G++ 
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + ++    + +  P + V+T S   +                 G   YA +    V LT 
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVYL--------------GNLGQANYAASMAGVVGLTR 160

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
             +      GI   ++ PG+ ET   AK      E+       G      E A   L+L 
Sbjct: 161 TLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL 220

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  105 bits (263), Expect = 3e-27
 Identities = 47/235 (20%), Positives = 88/235 (37%), Gaps = 20/235 (8%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +V+G   G+G +    + + GA V       E+G+   + +      +     
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYV 57

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++   + K+  +        +HVLVNNAG+L    +       ++    VN+ G + 
Sbjct: 58  HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 117

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
              ++V  +++A   + +   S  G+                     Y   K     LT+
Sbjct: 118 GIRAVVKPMKEAGRGSIINISSIEGLAGTV-------------ACHGYTATKFAVRGLTK 164

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
             +      GI   S+HPG  +TP          +   G      E ++ V++LA
Sbjct: 165 STALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLA 219

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  102 bits (256), Expect = 7e-26
 Identities = 44/239 (18%), Positives = 81/239 (33%), Gaps = 24/239 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR----SKTGNEN 113
           R +G+  +VTGA  G+G A A   A RGA V +     +       +       +     
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 114 VHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVL 171
               + +  S+   +            + V+VNNAG+L +     I+ E +++   V++ 
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 123

Query: 172 GTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
           G++ +T +    + K     R+I  +S      +             G   Y+  K   +
Sbjct: 124 GSFQVTRAAWDHM-KKQNYGRIIMTASASGIYGN------------FGQANYSAAKLGLL 170

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLA 290
            L        ++  I   ++ P             +            E  A  VLWL 
Sbjct: 171 GLANTLVIEGRKNNIHCNTIAPNAGSRM-----TETVMPEDLVEALKPEYVAPLVLWLC 224

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  100 bits (251), Expect = 9e-26
 Identities = 51/238 (21%), Positives = 86/238 (36%), Gaps = 24/238 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R+ GK  +VTGA +GIG A  +  A  GA++  V R +     A++A+ ++         
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-----AIAV 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTIT 177
           + D+S    +++       +   +H + + AGV  +              + V  T +  
Sbjct: 57  VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 116

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
            +           + V+T S  G+                 G+  YA  K   V L    
Sbjct: 117 VARKAGEVLEEGGSLVLTGSVAGLG--------------AFGLAHYAAGKLGVVGLARTL 162

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
           +     KG+    + PG  +TP  A   P   E+       G     EE A   L+L 
Sbjct: 163 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL 220

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  101 bits (253), Expect = 1e-25
 Identities = 39/266 (14%), Positives = 91/266 (34%), Gaps = 42/266 (15%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +++G+  ++TG  +G+G A  +   + GA V ++ +S E+     +        +NV   
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGI 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI-------TSEGFELNFAVNV 170
           + D+ S+ + K  A+R   +   +  L+ NAG+ + +  +           F+  F +NV
Sbjct: 57  VGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116

Query: 171 LGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQ 230
            G     ++ +P L  +  +      ++G              + +   +    R    +
Sbjct: 117 KGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGP----LYTAAKHAIVGLVRELAFE 172

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA---------------GN 275
           +A             +    +  G   +     S      +                 G 
Sbjct: 173 LA-----------PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR 221

Query: 276 LRTSEEGADTVLWLALQPKEKLVSGS 301
           +   EE     ++ A +      +G+
Sbjct: 222 MPEVEEYTGAYVFFATRGDAAPATGA 247

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 99.0 bits (246), Expect = 5e-25
 Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 28/239 (11%)

Query: 65  VVTGANAGIGYATAEGLASRGA-------TVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           ++TGA  GIG A A   A            + +  R+    E      R++         
Sbjct: 5   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LTDTI 62

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D+S + +++        +   +  LVNNAGV     L  +T E F+     N+ GT+ 
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +T+++  L+E+          S                  +F     Y  +K  Q  L E
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATK-------------AFRHSSIYCMSKFGQRGLVE 169

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
                 ++  +    + PG   TP   K     ++     +   E+ A  V+   LQP 
Sbjct: 170 TMRLYARKCNVRITDVQPGAVYTPMWGK----VDDEMQALMMMPEDIAAPVVQAYLQPS 224

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 99.0 bits (246), Expect = 2e-24
 Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 26/258 (10%)

Query: 43  FKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL 102
           F    K   P +     +GK   +TG   G+G      L+S GA   +  R  +  +   
Sbjct: 10  FSPLQKAMLPPN---SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA 66

Query: 103 SAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSE 160
             I S+TGN+ VH   CD+     +++  +         ++++NNA     +    ++  
Sbjct: 67  EQISSQTGNK-VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN 125

Query: 161 GFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM 220
            ++    + + GT  +T  +   L KA   A  +++++    T                +
Sbjct: 126 AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG------------SGFV 173

Query: 221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------- 273
              A  K    A+++  +  + + G+ F  + PG  +T G    +               
Sbjct: 174 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP 233

Query: 274 -GNLRTSEEGADTVLWLA 290
            G L T EE A+   +L 
Sbjct: 234 CGRLGTVEELANLAAFLC 251

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 6e-24
 Identities = 58/281 (20%), Positives = 101/281 (35%), Gaps = 43/281 (15%)

Query: 50  FKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT 109
           F+PE     ++GK  +VTGA+ GIG   A  LA  GA V +  RSKE  +  +S    + 
Sbjct: 7   FRPE----MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-EL 61

Query: 110 GNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFA 167
           G  + H     +  +T  + F  +       + +L+ N     +  L          +  
Sbjct: 62  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 121

Query: 168 VNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNK 227
           VN L    +T + +P+L+++     V++  +G +              ++  +  Y+ +K
Sbjct: 122 VNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV--------------AYPMVAAYSASK 167

Query: 228 RVQVALTEKWSEMYKEKGIG--FYSMHPGWAETPGVAKSMPSFNERF------------- 272
                      + Y    +         G  +T    K++                    
Sbjct: 168 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIK 227

Query: 273 AGNLRTSEEGADTVLWLALQPK-------EKLVSGSFYFDR 306
            G LR  E   D+ LW  L  +       E L S S+  DR
Sbjct: 228 GGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 268

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 95.6 bits (237), Expect = 1e-23
 Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 22/245 (8%)

Query: 55  MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
           M   +EGK  V+TG++ G+G + A   A+  A V +  RSKE    ++     K G E +
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 115 HLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLG 172
            ++  D++  +++ +       +   + V++NNAG+        ++   +      N+ G
Sbjct: 61  AVK-GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTG 119

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            +  +   +    +      VI +SS                  +     YA +K     
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKI------------PWPLFVHYAASKGGMKL 167

Query: 233 LTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEEGADT 285
           +TE  +  Y  KGI   ++ PG   TP  A+      +R         G +   EE A  
Sbjct: 168 MTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAV 227

Query: 286 VLWLA 290
             WLA
Sbjct: 228 AAWLA 232

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 94.8 bits (235), Expect = 3e-23
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 35/251 (13%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
            GK  + TGA  GIG   A  L  RGA+V +   S  K    + A   K G + V ++  
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ-A 63

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D+S  +E+ +  ++       +  +++N+G+        +T E F+  F +N  G + + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           +  +    +        ++++                        YA +K         +
Sbjct: 124 QQGLKHCRRGGRIILTSSIAAV--------------MTGIPNHALYAGSKAAVEGFCRAF 169

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------------GNLRTS 279
           +     KG+    + PG  +T    ++   +                         +   
Sbjct: 170 AVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYP 229

Query: 280 EEGADTVLWLA 290
            +    V  L 
Sbjct: 230 ADIGRAVSALC 240

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 94.4 bits (234), Expect = 4e-23
 Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 29/246 (11%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           ++G   +VTG + GIGYA  E LA  GA VY   R++++ +  L   R K  N      +
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS--V 61

Query: 119 CDLSSITEIKSFANRF-SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           CDL S TE          + +  +++LVNNAGV+ +      T + + +    N    Y 
Sbjct: 62  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++   PLL+ +     +   S  G               +   +  Y+ +K     +T+
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFS-------------ALPSVSLYSASKGAINQMTK 168

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----------GNLRTSEEGAD 284
             +  + +  I   S+ PG   TP V  ++     +             G     +E + 
Sbjct: 169 SLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSA 228

Query: 285 TVLWLA 290
            + +L 
Sbjct: 229 LIAFLC 234

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.3 bits (231), Expect = 1e-22
 Identities = 43/272 (15%), Positives = 82/272 (30%), Gaps = 39/272 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLA---SRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
            +    CV+TGA+ G G A A  LA   S G+ + +  RS+         + ++  +  V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 115 HLELCDLSSITEIKSFANRFS----LKNKPVHVLVNNAGVLENNRL-----ITSEGFELN 165
            L   DL +   ++   +        +     +L+NNA  L +                 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 166 FAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYAR 225
           +A+N+     +T   +   +  +P      V+   +                   +   +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQD-SPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK-----SMPSFNERFA-----GN 275
               +            E  +   S  PG  +             P    +       G 
Sbjct: 182 VLAAE------------EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA 229

Query: 276 LRTSEEGADTVLWLALQPKEKLVSGSF--YFD 305
           L      A  +L L    K+   SG+   ++D
Sbjct: 230 LVDCGTSAQKLLGLL--QKDTFQSGAHVDFYD 259

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 92.9 bits (230), Expect = 1e-22
 Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 32/250 (12%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           +GK  VVTG+ +GIG   A  LA++GA + +           + A  +      V  +  
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           DLS    ++   +    +   + +LVNNAG+     +    +E ++   A+N+   +  T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
            + +P ++K      +   S+ G+  +                  Y   K   V  T+  
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASA-------------NKSAYVAAKHGVVGFTKVT 169

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----------------AGNLRTSE 280
           +     +GI   ++ PGW  TP V K + +  E+                  +    T E
Sbjct: 170 ALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE 229

Query: 281 EGADTVLWLA 290
           +   T ++LA
Sbjct: 230 QLGGTAVFLA 239

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 92.4 bits (229), Expect = 2e-22
 Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 22/240 (9%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
             E K  +VTGA  GIG   A+ LA   + V  + R+++  ++ +  I+S          
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGY 64

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITS--EGFELNFAVNVLGTYT 175
             D+S   EI    N+   ++K V +LVNNAG+  +N  +    + +E     N+   + 
Sbjct: 65  AGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           IT+ +   +       R+I +SS    T               G   Y+ +K   +  T+
Sbjct: 125 ITQPISKRMINNRY-GRIINISSIVGLTG------------NVGQANYSSSKAGVIGFTK 171

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
             ++    + I   ++ PG+  +    K      +        G + T EE A+   +L+
Sbjct: 172 SLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS 231

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 91.6 bits (227), Expect = 3e-22
 Identities = 33/242 (13%), Positives = 67/242 (27%), Gaps = 37/242 (15%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           +VT      G  +A  L+  G TV     S ++ +   +   +               S 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ--------LKPMSE 55

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTITESMV 181
            E        +     V VLV+N       + I     E +        +  + +  ++ 
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
             ++K                   +        G +  +  Y   +     L    S+  
Sbjct: 116 SQMKK-------------RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKEL 162

Query: 242 KEKGIGFYSMHPGWAETPGVAKSMPSFNERF-------------AGNLRTSEEGADTVLW 288
            E  I  +++ P +  +       P+   +                 L T +E  + V +
Sbjct: 163 GEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAF 222

Query: 289 LA 290
           LA
Sbjct: 223 LA 224

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 90.9 bits (224), Expect = 7e-22
 Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 19/249 (7%)

Query: 62  KNCVVTGANAGIGYATAEGL---ASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
            + ++TG N G+G    + L         ++  CR++E+ +      ++ +    + ++L
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYT 175
            +  +  ++         K++ ++VL NNAG+   +     + S+        N +    
Sbjct: 63  RNFDAYDKLV-ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD-GMEQYARNKRVQVALT 234
           + ++ +PLL+KAA       +  G     +++  L    G+ D GM  Y  +K    A T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
           +  S     + I   S+HPGW +T     S P                   ++    +  
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP----------LDVPTSTGQIVQTISKLG 231

Query: 295 EKLVSGSFY 303
           EK  +G F 
Sbjct: 232 EK-QNGGFV 239

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 89.0 bits (220), Expect = 3e-21
 Identities = 52/248 (20%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
            +  +VTGA +GIG   A  L   G  V++  R +E   T L  +R            CD
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCD 59

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITE 178
           + S+ EI++       +  PV VLVNNAG         +  E +      N+ G + +T+
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 119

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWS 238
            ++            I   +                        Y+ +K   V  T+   
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAAPYSASKHGVVGFTKALG 168

Query: 239 EMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF----------------AGNLRTSEEG 282
                 GI   ++ PG+ ETP  A     +++ +                 G      E 
Sbjct: 169 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 228

Query: 283 ADTVLWLA 290
           A+ V +L 
Sbjct: 229 AEMVAYLI 236

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 88.7 bits (219), Expect = 4e-21
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 35/251 (13%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++TG+  GIG A AE     GA V +   + E      + I            
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAI 56

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
             D++    I         +   + +LVNNA + +   +  IT E ++  FA+NV GT  
Sbjct: 57  ALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF 116

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + +++   +       ++I ++S                     +  Y   K   ++LT+
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGE------------ALVGVYCATKAAVISLTQ 164

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA----------------GNLRTS 279
                    GI   ++ PG  +          F +                   G +  +
Sbjct: 165 SAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRA 224

Query: 280 EEGADTVLWLA 290
           E+     ++LA
Sbjct: 225 EDLTGMAIFLA 235

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 88.3 bits (218), Expect = 5e-21
 Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 25/238 (10%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EGK  +VTGA+ GIG A AE LA+RGA V     S+   +     +       N    + 
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLML 57

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNF--AVNVLGTYTIT 177
           +++    I+S   +   +   V +LVNNAG+  +N L+  +  E N     N+   + ++
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           ++++  +       R+IT+ S      +             G   YA  K   +  ++  
Sbjct: 118 KAVMRAM-MKKRHGRIITIGSVVGTMGN------------GGQANYAAAKAGLIGFSKSL 164

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
           +     +GI    + PG+ ET                    G L  ++E A+ V +LA
Sbjct: 165 AREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLA 222

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 88.3 bits (218), Expect = 6e-21
 Identities = 50/257 (19%), Positives = 86/257 (33%), Gaps = 39/257 (15%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           +  GK C+VTGA   IG ATA  LA  G  + ++  ++E  E A +++R K         
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSY 59

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA---GVLENNRLITSEGFELNFAVNVLGTY 174
           +CD++S   +    +        +  L NNA   G     +   S+ F     +NV G +
Sbjct: 60  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 119

Query: 175 TITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALT 234
            + +++   +        V T S  G+                  M  Y  +K   +ALT
Sbjct: 120 HVLKAVSRQMITQNYGRIVNTASMAGVK-------------GPPNMAAYGTSKGAIIALT 166

Query: 235 EKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA--------------------- 273
           E  +       I   ++ PG+     + +       +                       
Sbjct: 167 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM 226

Query: 274 GNLRTSEEGADTVLWLA 290
                  E    V +L 
Sbjct: 227 RRYGDINEIPGVVAFLL 243

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.8 bits (214), Expect = 1e-20
 Identities = 32/249 (12%), Positives = 69/249 (27%), Gaps = 34/249 (13%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           E +  +V G    +G    +   +R   V  +   + +  +A         +  V +   
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA---------SVIVKMTDS 51

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTI 176
                 ++ +   +  L ++ V  ++  AG             +  +L +  ++  +   
Sbjct: 52  FTEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
           +               +    +                    GM  Y   K     L + 
Sbjct: 111 SHLATK---HLKEGGLLTLAGAKAALDGT------------PGMIGYGMAKGAVHQLCQS 155

Query: 237 WSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPK 294
            +        G    ++ P   +TP   KSMP   E    +    E   +T         
Sbjct: 156 LAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP---EADFSSWTPLEFLVETFHDWI-TGN 211

Query: 295 EKLVSGSFY 303
           ++  SGS  
Sbjct: 212 KRPNSGSLI 220

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 2e-20
 Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 36/246 (14%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
           R++GK  ++T A  GIG A A   A  GA V     ++ K +              +   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTR 55

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYT 175
           + D++     K   ++F+ + + + VL N AG + +  +     + ++ +  +NV   Y 
Sbjct: 56  VLDVTK----KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + ++ +P +        +   S                         Y+  K   + LT+
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGV------------VNRCVYSTTKAAVIGLTK 159

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF-----------AGNLRTSEEGAD 284
             +  + ++GI    + PG  +TP + + + +                 G   T+EE A 
Sbjct: 160 SVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM 219

Query: 285 TVLWLA 290
             ++LA
Sbjct: 220 LCVYLA 225

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 86.1 bits (212), Expect = 5e-20
 Identities = 41/241 (17%), Positives = 69/241 (28%), Gaps = 17/241 (7%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           V+TG    IG++ A  L  +G  V +  R  E     L A  +     +  L   DLS  
Sbjct: 5   VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 64

Query: 125 TE----IKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           +      +   +          VLVNNA       L+  +          +         
Sbjct: 65  SSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124

Query: 181 VPLLEKAAPD-ARVITVSSGGMYTAHLTDDLEFNSGSFD----GMEQYARNKRVQVALTE 235
              +       A       GG + +     +       D    G   Y   K     LT 
Sbjct: 125 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTR 184

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGN------LRTSEEGADTVLWL 289
             +     + I   ++ PG +  P          E +           ++ + AD + +L
Sbjct: 185 AAALELAPRHIRVNAVAPGLSLLPPAMP--QETQEEYRRKVPLGQSEASAAQIADAIAFL 242

Query: 290 A 290
            
Sbjct: 243 V 243

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.2 bits (210), Expect = 7e-20
 Identities = 44/238 (18%), Positives = 80/238 (33%), Gaps = 33/238 (13%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
             ++ +VTG N GIG A A+ LA+ G  V +  R     +                    
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVE-------------V 52

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
           D++    +            PV VLV+NAG+  +  L  +T E FE     N+ G + + 
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           +     +++      +   S  G++                    YA +K   + +    
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLW-------------GIGNQANYAASKAGVIGMARSI 159

Query: 238 SEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLA 290
           +    +  +    + PG+ +T           +          + T  E A  V +LA
Sbjct: 160 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA 217

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 9e-20
 Identities = 44/247 (17%), Positives = 79/247 (31%), Gaps = 26/247 (10%)

Query: 58  RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLE 117
            ++G   V+TG  +G+G ATAE L  +GA+  ++      GE     + +        + 
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTY 174
                      +      +        +  A    N +     T E F+    VN++GT+
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 175 TITESMVPLLEKAAPD-----ARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRV 229
            +   +   + +  PD       +I  +S   +                G   Y+ +K  
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------------QVGQAAYSASKGG 169

Query: 230 QVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGA 283
            V +T   +      GI   ++ PG   TP +           A        L    E A
Sbjct: 170 IVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYA 229

Query: 284 DTVLWLA 290
             V  + 
Sbjct: 230 HLVQAII 236

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 2e-19
 Identities = 47/264 (17%), Positives = 87/264 (32%), Gaps = 43/264 (16%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRS------KEKGETALSAIRSKTGNENVH 115
              ++TG ++GIG   A  LAS  +  + V  +      + +   A  A+    G  ++ 
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPG--SLE 60

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYT 175
               D+     + +   R +     V V     G+L     +  +       VNV+GT  
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           + ++ +P +++      ++T S GG+                   + Y  +K     L E
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLM-------------GLPFNDVYCASKFALEGLCE 167

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER----------------------FA 273
             + +    G+    +  G   T  + K + S  E                       F 
Sbjct: 168 SLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

Query: 274 GNLRTSEEGADTVLWLALQPKEKL 297
              +  EE A+  L     PK  L
Sbjct: 228 EAAQNPEEVAEVFLTALRAPKPTL 251

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 81.6 bits (201), Expect = 1e-18
 Identities = 49/240 (20%), Positives = 85/240 (35%), Gaps = 38/240 (15%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
           I  K  +V  A+ GIG A A+ L+  GA V +  R++E  +        ++G+  V    
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK--------RSGHRYVV--- 50

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTI 176
           CDL    ++     +     K V +LV NAG  +      +T+E F+       L    I
Sbjct: 51  CDLRK--DLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104

Query: 177 TESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEK 236
             + +P +++      V   S   +                + +      +       + 
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFSVIS-------------PIENLYTSNSARMALTGFLKT 151

Query: 237 WSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGADTVLWLA 290
            S      GI    + PGW ET  V + +    ++          +   EE A  V +L 
Sbjct: 152 LSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC 211

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 80.2 bits (197), Expect = 3e-18
 Identities = 48/245 (19%), Positives = 82/245 (33%), Gaps = 42/245 (17%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           ++ +VTG  +G+G A A  L +RG  V ++   +E  +                    D+
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVE--------------GDV 47

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNN-----AGVLENNRLITSEGFELNFAVNVLGTYTI 176
           +   +++    R   +     V+          +L        E F     VN+LGT+ +
Sbjct: 48  TREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 177 TESMVPLLEKAAPDA-----RVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQV 231
                  + +  PDA      ++  +S   +                G   YA +K   V
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------------QIGQAAYAASKGGVV 155

Query: 232 ALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------GNLRTSEEGADT 285
           ALT   +      GI   ++ PG  +TP +           A        L   EE A  
Sbjct: 156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAAL 215

Query: 286 VLWLA 290
           VL + 
Sbjct: 216 VLHIL 220

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 80.5 bits (198), Expect = 4e-18
 Identities = 41/255 (16%), Positives = 77/255 (30%), Gaps = 37/255 (14%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVH 115
           A +EGK  +VTGA  GIG   A  L  RG  V +    S E  E  ++AI+      +  
Sbjct: 14  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAA 71

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGT 173
               ++  + +I             + ++ +N+GV+    +  +T E F+  F +N  G 
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQ 131

Query: 174 YTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVAL 233
           + +                +       +  +           +         +K      
Sbjct: 132 FFVAREAYK---------HLEIGGRLILMGSITGQAKAVPKHAVYSG-----SKGAIETF 177

Query: 234 TEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF------------------AGN 275
               +    +K I    + PG  +T         +                         
Sbjct: 178 ARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR 237

Query: 276 LRTSEEGADTVLWLA 290
           +    + A  V +LA
Sbjct: 238 VGLPIDIARVVCFLA 252

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 80.1 bits (197), Expect = 4e-18
 Identities = 51/244 (20%), Positives = 90/244 (36%), Gaps = 21/244 (8%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSI 124
           VVTGA+ GIG A A  L   G  V +      K    +S      G + +     D+S  
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG-GDVSKE 63

Query: 125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI--TSEGFELNFAVNVLGTYTITESMVP 182
            ++++           + V+VNNAG+  +  LI      ++    +N+ G +  T++   
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 183 LLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK 242
           ++ K     R+I ++S                    G   YA  K   +  ++  +    
Sbjct: 124 IMMKKRK-GRIINIASVVGLIG------------NIGQANYAAAKAGVIGFSKTAAREGA 170

Query: 243 EKGIGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTSEEGADTVLWLALQPKEKL 297
            + I    + PG+  +   AK      ++       G     E  A  V +LAL P    
Sbjct: 171 SRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY 230

Query: 298 VSGS 301
           ++G 
Sbjct: 231 ITGQ 234

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 78.7 bits (193), Expect = 2e-17
 Identities = 50/247 (20%), Positives = 82/247 (33%), Gaps = 32/247 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  +VTGA  GIG A A  L   G  V +   +    +   S I    G  +      D+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDV 59

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNF--AVNVLGTYTITES 179
           S   ++ +   +         V+VNNAGV  +  + +     ++    +NV G     ++
Sbjct: 60  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQA 119

Query: 180 MVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSE 239
            V   +K             G     +    +        +  Y+ +K     LT+  + 
Sbjct: 120 AVEAFKK------------EGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAAR 167

Query: 240 MYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA----------------GNLRTSEEGA 283
                GI      PG  +TP  A+     +E                   G L   E+ A
Sbjct: 168 DLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVA 227

Query: 284 DTVLWLA 290
             V +LA
Sbjct: 228 ACVSYLA 234

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 78.4 bits (192), Expect = 2e-17
 Identities = 36/249 (14%), Positives = 80/249 (32%), Gaps = 34/249 (13%)

Query: 58  RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
            + GK  +VTG      I Y  A+ +   GA +    ++ +K +  +    ++ G++ V 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVL 60

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL-------ITSEGFELNFAV 168
              CD++    I +               V++ G    ++L       +T EGF++   +
Sbjct: 61  --QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDI 118

Query: 169 NVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKR 228
           +      + ++   +L      + ++T+S  G   A                      K 
Sbjct: 119 SSYSFVAMAKACRSMLNPG---SALLTLSYLGAERA------------IPNYNVMGLAKA 163

Query: 229 VQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA-------GNLRTSEE 281
              A     +     +G+   ++  G   T   +                      T E+
Sbjct: 164 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIED 223

Query: 282 GADTVLWLA 290
             ++  +L 
Sbjct: 224 VGNSAAFLC 232

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 76.1 bits (186), Expect = 9e-17
 Identities = 35/247 (14%), Positives = 59/247 (23%), Gaps = 33/247 (13%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD 120
               +V G    +G A  E     G TV  +  S    + A S I           E   
Sbjct: 2   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--DQADSNILVDGNKNWTEQEQSI 59

Query: 121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLI---TSEGFELNFAVNVLGTYTIT 177
           L              L+   V  +   AG             +  +L    +V  +    
Sbjct: 60  LEQTASS--------LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           +          P   +    +                     M  Y   K     LT   
Sbjct: 112 KLATT---HLKPGGLLQLTGAAAAMGP------------TPSMIGYGMAKAAVHHLTSSL 156

Query: 238 SEMYKEKGIGF--YSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE 295
           +             ++ P   +TP   K MP        +       ++ +L    +   
Sbjct: 157 AAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP---NADHSSWTPLSFISEHLLKWTTETSS 213

Query: 296 KLVSGSF 302
           +  SG+ 
Sbjct: 214 RPSSGAL 220

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 73.0 bits (178), Expect = 2e-15
 Identities = 48/253 (18%), Positives = 86/253 (33%), Gaps = 48/253 (18%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
              V++G   GIG AT + L + G  +  +     +                    + DL
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADL 42

Query: 122 SSITEIKS-FANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM 180
           S+    K   A+  +  +K +  LV  AG+        ++      +VN  G   + ++ 
Sbjct: 43  STAEGRKQAIADVLAKCSKGMDGLVLCAGL-----GPQTKVLGNVVSVNYFGATELMDAF 97

Query: 181 VPLLEKAAPDARVITVSSGGMYTAHLTDDLEF--------NSGSFDGMEQ-------YAR 225
           +P L+K    A V+  S    + A   + L           + +             YA 
Sbjct: 98  LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157

Query: 226 NKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNERFA------GNLR 277
           +K        K +  + E G+   ++ PG  ETP +   +  P + E  A      G   
Sbjct: 158 SKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

Query: 278 TSEEGADTVLWLA 290
              E A  + +L 
Sbjct: 218 EPSEMASVIAFLM 230

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 70.3 bits (171), Expect = 2e-14
 Identities = 36/251 (14%), Positives = 67/251 (26%), Gaps = 33/251 (13%)

Query: 55  MQARIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE 112
           +   + GK  +V G      +G+A A  L   GA V +  +++     A     +  G  
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL------ITSEGFELNF 166
               ++       E+ +           +  LV+         +         + + L  
Sbjct: 62  LFRADVTQDE---ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLAL 118

Query: 167 AVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARN 226
            V+      +     PLL +      ++T++                          A  
Sbjct: 119 EVSAYSLVAVARRAEPLLREGGG---IVTLTYYASEKV------------VPKYNVMAIA 163

Query: 227 KRVQVALTEKWSEMYKEKG--IGFYSMHPGWAETPGVAKSMPSFNERFA-----GNLRTS 279
           K    A     +     KG  +   S  P                +R A         T 
Sbjct: 164 KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQ 223

Query: 280 EEGADTVLWLA 290
           EE  +  L+L 
Sbjct: 224 EEVGNLGLFLL 234

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 62.0 bits (149), Expect = 1e-11
 Identities = 47/265 (17%), Positives = 74/265 (27%), Gaps = 48/265 (18%)

Query: 65  VVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA-IRSKTGNE----------- 112
           +VTGA   +G + AEGL + G  V +          ALSA + ++  N            
Sbjct: 6   LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 65

Query: 113 -----NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELN 165
                +       ++  T                 VLVNNA       L     +G E  
Sbjct: 66  ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPC 125

Query: 166 --------------FAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLE 211
                         F  N +  Y + ++    +       R      G  Y+     D  
Sbjct: 126 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR------GTNYSIINMVDAM 179

Query: 212 FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER 271
            N             K     LT   +       I    + PG +    V    P+  E 
Sbjct: 180 TNQPLLGYTIYT-MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL--VDDMPPAVWEG 236

Query: 272 FA------GNLRTSEEGADTVLWLA 290
                       ++ E +D V++L 
Sbjct: 237 HRSKVPLYQRDSSAAEVSDVVIFLC 261

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 58.9 bits (141), Expect = 1e-10
 Identities = 28/242 (11%), Positives = 69/242 (28%), Gaps = 21/242 (8%)

Query: 58  RIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
            ++GK  ++ G   N  I Y  A+   ++GAT+     + E  E  +  I  +    + +
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELN--SPY 58

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYT 175
           +   D+S     KS  N        +  +V++                      +  + +
Sbjct: 59  VYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA---------LEGSLLETSKS 109

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
              + + +   +  +             + LT     ++            K    +   
Sbjct: 110 AFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVR 169

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-------SFNERFAGNLRTSEEGADTVLW 288
             +    +  I   ++  G   T   +           +          + EE  +  ++
Sbjct: 170 YLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY 229

Query: 289 LA 290
           L 
Sbjct: 230 LL 231

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 54.8 bits (130), Expect = 4e-09
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 55  MQARIEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE 112
           +   + GK   + G   + G G+A A+ LA+ GA + +            S  R K    
Sbjct: 2   LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

Query: 113 NVHLE 117
            V  +
Sbjct: 62  RVLPD 66

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 53.5 bits (127), Expect = 5e-09
 Identities = 24/225 (10%), Positives = 59/225 (26%), Gaps = 14/225 (6%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +  ++ G    +G   A  LA+ G  + +  R +EK E   +  R   G+ ++     + 
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMV 181
           ++     +               + N    +                      +  E + 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
            +LE     + + T+ +                 + D    +          ++K     
Sbjct: 121 EVLESEKVVSALHTIPAARF-------------ANLDEKFDWDVPVCGDDDESKKVVMSL 167

Query: 242 KEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTV 286
             +  G   +  G      + +S+              E G   +
Sbjct: 168 ISEIDGLRPLDAGPLSNSRLVESLTPLILNIMRFNGMGELGIKFL 212

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 54.0 bits (128), Expect = 6e-09
 Identities = 24/253 (9%), Positives = 63/253 (24%), Gaps = 30/253 (11%)

Query: 58  RIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVH 115
            ++GK  +V+G      I +  A     +GA + +    + +    ++            
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 116 LELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYT 175
               +              + +        N    + ++     +               
Sbjct: 63  DVQNE--------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYAD 114

Query: 176 ITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTE 235
           +++ +       A  A+ +        +    D     +         A++    V    
Sbjct: 115 VSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESV--NR 172

Query: 236 KWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAG------------------NLR 277
             +    + G+    +  G   T  ++  +       AG                  N++
Sbjct: 173 FVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 232

Query: 278 TSEEGADTVLWLA 290
            +   A TV  L 
Sbjct: 233 DATPVAKTVCALL 245

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 51.8 bits (123), Expect = 2e-08
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 25/194 (12%)

Query: 53  EDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE 112
           +     ++GK  VV      +G  +A  LA  GA V +  R  +K + A  ++  +    
Sbjct: 15  KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN 74

Query: 113 NVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLG 172
               E  D +S  E            K  H +     +     L+    ++   ++ ++ 
Sbjct: 75  VTAAETADDASRAEA----------VKGAHFVFTAGAI--GLELLPQAAWQNESSIEIVA 122

Query: 173 TYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVA 232
            Y     +      A    +                   F +    G+ +   ++     
Sbjct: 123 DYNAQPPLGIGGIDATDKGKEYGGKRA------------FGALGIGGL-KLKLHRACIAK 169

Query: 233 LTEKWSEMYKEKGI 246
           L E    ++  + I
Sbjct: 170 LFESSEGVFDAEEI 183

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 48.6 bits (115), Expect = 4e-07
 Identities = 41/198 (20%), Positives = 65/198 (32%), Gaps = 16/198 (8%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA-LSAIRS--KTGNENVHLEL 118
           K  ++TG     G   AE L  +G  V+ + R      T  +  I     T N   HL  
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITE 178
            DLS  + +         +   V+ L   + V  +      E  E    V+ +GT  + E
Sbjct: 62  GDLSDTSNLTRILREV--QPDEVYNLGAMSHVAVSF-----ESPEYTADVDAMGTLRLLE 114

Query: 179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN-SGSFDGMEQYARNKRVQVALTEKW 237
           ++  L        R    S+  +Y   L  ++    +  F     YA  K     +T  +
Sbjct: 115 AIRFL--GLEKKTRFYQASTSELY--GLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY 170

Query: 238 SEMYKEKGIGF-YSMHPG 254
            E Y           H  
Sbjct: 171 RESYGMYACNGILFNHES 188

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 47.4 bits (112), Expect = 1e-06
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 28/210 (13%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           +TG    IG A    +        +           L ++   + +   + E  D+    
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDSA 63

Query: 126 EIKSFANRFSLKNKPVHV--LVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESM--- 180
           EI         + +P  V  L   + V  +       G       N++GTY + E     
Sbjct: 64  EITRIFE----QYQPDAVMHLAAESHVDRSI-----TGPAAFIETNIVGTYALLEVARKY 114

Query: 181 -VPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ---------YARNKRVQ 230
              L E    + R   +S+  +Y      D   NS +     +         Y+ +K   
Sbjct: 115 WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASS 174

Query: 231 VALTEKWSEMYKEKGIGFYSMHPGWAETPG 260
             L   W   Y   G+     +      P 
Sbjct: 175 DHLVRAWRRTY---GLPTIVTNCSNNYGPY 201

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 44/277 (15%), Positives = 73/277 (26%), Gaps = 30/277 (10%)

Query: 61  GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
               +VTG   G+G   A  LA RGA  + +V RS    + A   +              
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 120 DLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTIT 177
              +  E           + P+  + + A  L++  +  +T E  E      VLG   + 
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 178 ESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
           E    L   A         + G                       YA        L ++ 
Sbjct: 129 ELTRELDLTAFVLFSSFASAFGAPGLGG-----------------YAPGNAYLDGLAQQR 171

Query: 238 SEMYKEKGIGFYSMHPG-WAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKEK 296
                   +   ++  G WA +      +     R        E     +     + +  
Sbjct: 172 RSDG----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVC 227

Query: 297 LVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLR 333
            +     +DR      L            D I D  R
Sbjct: 228 PIVIDVRWDR-----FLLAYTAQRPTRLFDEIDDARR 259

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 44.1 bits (102), Expect = 1e-05
 Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 2/56 (3%)

Query: 61  GKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENV 114
              C + G     G G+  A+ L+ R   +              +    K  N+ +
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMI 57

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 29/219 (13%), Positives = 59/219 (26%), Gaps = 28/219 (12%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           K  ++TG    +G    + L   G  V +V             +    G+EN  L   D+
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTG---RKRNVEHWIGHENFELINHDV 58

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMV 181
                         ++   ++ L + A                    N +GT  +     
Sbjct: 59  ---------VEPLYIEVDQIYHLASPASPPNYM-----YNPIKTLKTNTIGTLNMLGLA- 103

Query: 182 PLLEKAAPDARVITVSSGGMYTAH----LTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
                    AR++  S+  +Y        ++D   +         Y   KRV   +   +
Sbjct: 104 -----KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 158

Query: 238 SEMYKEKGIGF-YSMHPGWAETPGVAKSMPSFNERFAGN 275
            +    +          G        + + +F  +    
Sbjct: 159 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQG 197

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 29/194 (14%), Positives = 54/194 (27%), Gaps = 15/194 (7%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA----LSAIRSKTGNENVHLELCDL 121
           +TG     G   AE L  +G  V+ + R      T     L          N+ L   DL
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMV 181
           +  T +    N             ++  +  +    T         V+ +GT  + +++ 
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT-------ADVDGVGTLRLLDAVK 118

Query: 182 PLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMY 241
                     +    S+  +Y        +  +  F     Y   K     +   + E Y
Sbjct: 119 TC--GLINSVKFYQASTSELYGKVQEIPQKETT-PFYPRSPYGAAKLYAYWIVVNFREAY 175

Query: 242 KEKGIGF-YSMHPG 254
               +      H  
Sbjct: 176 NLFAVNGILFNHES 189

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 16/69 (23%), Positives = 21/69 (30%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           EG   +VTGAN  +     E L   G  V    RS  K         +K         + 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 120 DLSSITEIK 128
           D+       
Sbjct: 70  DMLKQGAYD 78

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.7 bits (88), Expect = 7e-04
 Identities = 14/66 (21%), Positives = 25/66 (37%)

Query: 59  IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLEL 118
            +GK   VTG     G   +  L + GATV     +     +     R   G ++   ++
Sbjct: 6   WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65

Query: 119 CDLSSI 124
            D + +
Sbjct: 66  RDQNKL 71

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 18/146 (12%)

Query: 57  ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHL 116
           A++     ++TG    +G   A    S+G  + +      KG  A   +   +   N   
Sbjct: 1   AKL-----LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG--ATDNLHWLSSLGNFEF 53

Query: 117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTI 176
              D+ +  ++     ++         L     +  +      +   ++F +NV GT  +
Sbjct: 54  VHGDIRNKNDVTRLITKY--MPDSCFHLAGQVAMTTSI-----DNPCMDFEINVGGTLNL 106

Query: 177 TESMVPLLEKAAPDARVITVSSGGMY 202
            E++            +I  S+  +Y
Sbjct: 107 LEAVRQYNSN----CNIIYSSTNKVY 128

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 13/181 (7%)

Query: 66  VTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT 125
           VTG +  IG  T   L   G  V ++        + L  I  + G ++      D+ +  
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEA 63

Query: 126 EIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLE 185
            +          +  +  +++ AG+      +        +  NV GT  +  +M     
Sbjct: 64  LMTEIL-----HDHAIDTVIHFAGLKAVGESVQKP--LEYYDNNVNGTLRLISAM----- 111

Query: 186 KAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKG 245
           +AA     I  SS  +Y          +  +      Y ++K +   +     +   +  
Sbjct: 112 RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171

Query: 246 I 246
           I
Sbjct: 172 I 172

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 36.8 bits (84), Expect = 0.003
 Identities = 26/191 (13%), Positives = 54/191 (28%), Gaps = 37/191 (19%)

Query: 62  KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL 121
           +   + G    +G A    L  RG    ++    E                   L L D 
Sbjct: 3   QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------LNLLDS 43

Query: 122 SSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMV 181
            ++ +   FA+    +   V++     G +  N    ++        N++    I  +  
Sbjct: 44  RAVHDF--FASE---RIDQVYLAAAKVGGIVANNTYPADFIY----QNMMIESNIIHAA- 93

Query: 182 PLLEKAAPDARVITVSSGGMY----TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKW 237
                     +++ + S  +Y       + +            E YA  K   + L E +
Sbjct: 94  ----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESY 149

Query: 238 SEMYKEKGIGF 248
           +  Y       
Sbjct: 150 NRQYGRDYRSV 160

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.5 bits (83), Expect = 0.004
 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 60  EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELC 119
           + K   V GA    G +     A+ G  V     S +        +++          L 
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL--IAEELQAIPNVTLFQGPLL 59

Query: 120 DLSSITE 126
           +   + +
Sbjct: 60  NNVPLMD 66

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.72
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.72
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.69
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.69
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.66
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.63
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.63
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.61
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.57
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.57
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.44
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.41
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.4
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.24
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.24
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.21
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.02
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.01
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.29
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.12
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.03
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.02
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.0
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.86
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.81
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.78
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.77
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.76
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.75
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.71
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.7
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.69
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.66
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.66
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.63
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.6
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.55
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.51
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.48
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.47
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.41
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.39
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.37
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.36
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.32
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.32
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.31
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.25
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.25
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.25
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.24
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.23
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.23
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.21
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.21
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.2
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.17
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.13
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.12
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.12
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.11
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.11
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.09
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.99
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.98
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.98
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.93
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.85
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.85
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.82
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.77
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.7
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.67
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.65
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.63
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.62
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.6
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.54
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.52
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.51
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.46
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.42
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.39
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.38
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.38
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.16
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.91
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.74
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.67
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.64
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.63
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.61
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.32
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.29
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.25
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.21
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.16
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.12
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.11
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.8
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.64
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.55
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.48
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.47
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.18
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.16
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.15
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.15
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.13
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.11
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.03
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.97
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.85
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.71
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.67
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.66
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.65
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.64
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.56
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.52
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.5
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.48
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.4
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.29
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.25
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.22
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.22
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.17
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.14
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.05
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.01
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.82
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.66
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.49
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.49
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.48
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.47
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.45
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.45
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.39
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.38
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.37
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.23
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.14
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.13
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.1
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.04
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.04
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.92
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.72
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.69
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.65
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.63
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.54
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.32
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	91.13
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.95
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.57
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.5
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.47
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	90.19
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.13
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.13
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.95
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.92
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.84
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.24
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.2
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.19
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	89.14
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.11
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.09
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.08
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.02
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	88.85
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.6
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.56
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.54
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	88.39
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.32
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	88.28
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.12
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	87.91
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.53
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.44
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.37
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.18
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.01
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	86.77
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.74
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.65
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	86.2
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	85.4
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.37
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.83
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.39
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.17
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.64
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.56
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	83.5
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.22
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.86
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.83
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	82.61
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.46
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.3
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.74
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.67
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	80.97
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	80.93
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	80.89
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	80.65

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-52  Score=368.87  Aligned_cols=238  Identities=22%  Similarity=0.306  Sum_probs=211.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..  .++.++.+|++|+++++++++++.++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g--~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999998763  47889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC-CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          138 NKPVHVLVNNAGVLENNRL-ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +|++|+||||||+...... .+.++|++++++|+.++++++|+++|+|+++ ++++||++||.++.            .+
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~isS~~~~------------~~  152 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAE------------NK  152 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------CC
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-cccccccccccchh------------cc
Confidence            9999999999998765543 6889999999999999999999999999988 67899999999887            45


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-hhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-PSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      .++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++..... ++..+.     +.+|+.+|+|+|++++||+
T Consensus       153 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            6788999999999999999999999999999999999999999876543 232222     3578899999999999999


Q ss_pred             ccCCCCCCCcceeeCCCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~~~  310 (339)
                      |+...+.++..+.+|||-+.
T Consensus       233 S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CchhcCCcCCEEEECcCccc
Confidence            86655555556678999654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.2e-52  Score=371.74  Aligned_cols=239  Identities=23%  Similarity=0.286  Sum_probs=211.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999988877778999999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +|++|+||||||+..+..   ..+.++|++++++|+.++++++|+++|+|+++ ++|+||++||.++.            
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~------------  147 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGI------------  147 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGT------------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccHhhc------------
Confidence            999999999999875433   36889999999999999999999999999887 68999999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--------hHHHH-----HhccCCCHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--------SFNER-----FAGNLRTSEE  281 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--------~~~~~-----~~~~~~~~~e  281 (339)
                      .+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......        +..+.     +++|+.+|+|
T Consensus       148 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~d  227 (258)
T d1iy8a_         148 RGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE  227 (258)
T ss_dssp             SBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHH
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHH
Confidence            3567899999999999999999999999999999999999999998654321        11111     4578899999


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +|+.++||+|+.....++..+.+|||-.
T Consensus       228 vA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         228 IAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            9999999999665555555677899853

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.4e-52  Score=366.21  Aligned_cols=237  Identities=24%  Similarity=0.290  Sum_probs=208.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999999999999999765  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ ++|+||++||.++..            
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~------------  151 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLT------------  151 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------
T ss_pred             cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHhcC------------
Confidence            9999999999998776554  6789999999999999999999999999988 679999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....++..+.     +++|+.+|+|+|++++||+
T Consensus       152 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  231 (251)
T d2c07a1         152 GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS  231 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            46788999999999999999999999999999999999999999987765554443     3578999999999999999


Q ss_pred             ccCCCCCCCcceeeCCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++...+.++..+.+|||-.
T Consensus       232 S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         232 SDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhCCCcCcEEEECCCcC
Confidence            9766555556667899853

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-52  Score=367.15  Aligned_cols=234  Identities=21%  Similarity=0.271  Sum_probs=209.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.     .++.++.+|++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999888887763     36788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||+......  .+.++|++++++|+.++++++|+++|.|+++ +.|+||++||..+.            .
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~------------~  144 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGL------------A  144 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------S
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEeccccccc------------c
Confidence            9999999999998775543  6889999999999999999999999999988 67999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQPKE  295 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~~~  295 (339)
                      +.++..+|++||+|+++|+|++|.|++++|||||+|+||+++||+.....+...+.+++|+.+|+|+|+.++||+++...
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~  224 (244)
T d1nffa_         145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESS  224 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChhhC
Confidence            56788999999999999999999999999999999999999999987655444455678899999999999999996655


Q ss_pred             CCCCcceeeCCCCC
Q 019551          296 KLVSGSFYFDRAEA  309 (339)
Q Consensus       296 ~~~~G~~~~d~~~~  309 (339)
                      ..++..+.+|||-.
T Consensus       225 ~itG~~i~vDGG~~  238 (244)
T d1nffa_         225 YSTGAEFVVDGGTV  238 (244)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCCEEEECCCee
Confidence            55555678899964

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-52  Score=366.41  Aligned_cols=233  Identities=24%  Similarity=0.314  Sum_probs=208.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.     .+...+.+|++|+++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-----ANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            4789999999999999999999999999999999999999988887763     35778899999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||.......  .+.++|++.+++|+.++++++|+++|+|+++ ++|+||++||.++..            
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~------------  142 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVGTM------------  142 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH------------
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchhhcC------------
Confidence            9999999999999876654  6889999999999999999999999999988 679999999998873            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++..+|++||+|+++|+|++|.|++++|||||+|+||+++||+.....++..+.     +.+|+.+|+|+|+.++||+
T Consensus       143 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  222 (243)
T d1q7ba_         143 GNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLA  222 (243)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            46788999999999999999999999999999999999999999887665544333     3578899999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      |+...+.+++.+.+|||-
T Consensus       223 S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         223 SDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CchhcCCcCCeEEECCCe
Confidence            966665566666789984

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.2e-51  Score=365.63  Aligned_cols=238  Identities=22%  Similarity=0.269  Sum_probs=208.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999865 567777777655  3478899999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +++|+||+||||||+..+...  .+.++|++++++|+.++++++|+++|+|++++.+++||++||.++.           
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~-----------  149 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-----------  149 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----------
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc-----------
Confidence            999999999999999876654  7899999999999999999999999999888667789999999887           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHHH-----HhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNER-----FAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~-----~~~~~~~~~e~A~~v  286 (339)
                       .+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+......  +..+.     +++|+.+|+|+|+++
T Consensus       150 -~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  228 (261)
T d1geea_         150 -IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -ccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             3568889999999999999999999999999999999999999998765422  22222     457899999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +||+|+...+.++..+.+|||.
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~  250 (261)
T d1geea_         229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhcCCcCCeEEECCCe
Confidence            9999976666666677789995

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.2e-52  Score=364.89  Aligned_cols=238  Identities=22%  Similarity=0.355  Sum_probs=209.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.++ .++.++.+|++|+++++++++++.++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999999999999887765 47889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++.+++|+.++++++|+++|+|+++ +.|+||+++|..+..           .
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S~~~~~-----------~  148 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEE-----------V  148 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTC-----------C
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-ccccccccccchhcc-----------c
Confidence            9999999999998766554  6899999999999999999999999999877 679999999976542           2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHH-----HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNE-----RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~-----~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++......  +..+     .+++|+.+|+|+|++++|
T Consensus       149 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  228 (251)
T d1vl8a_         149 TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF  228 (251)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            457788999999999999999999999999999999999999998765422  2222     246789999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+...+.++..+.+|||-
T Consensus       229 L~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         229 LASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhCCCcCcEEEeCcCe
Confidence            99976665566667789984

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.9e-51  Score=364.83  Aligned_cols=236  Identities=23%  Similarity=0.328  Sum_probs=203.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++.+..+ .++.++.+|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-SCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999974 567777778776654 57899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.++.            .
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~------------~  147 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGL------------V  147 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------S
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccccce------------e
Confidence            9999999999999876654  6889999999999999999999999999988 67999999999987            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------------HHHHHhccCCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------------FNERFAGNLRT  278 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~~~~  278 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.......                 ....|.+|+.+
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~  227 (260)
T d1x1ta1         148 ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVT  227 (260)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBC
T ss_pred             ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcC
Confidence            5688899999999999999999999999999999999999999987643211                 11224678999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+|++++||+|+...+.++..+.+|||-
T Consensus       228 pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         228 PEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            999999999999976665666667789984

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.4e-51  Score=363.21  Aligned_cols=234  Identities=21%  Similarity=0.285  Sum_probs=206.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|+++++++++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            388999999999999999999999999999999999999988888776     347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++.+++|+.|+++++|+++|.|.+++++|+||++||.++.            .
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------------~  144 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR------------R  144 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------------S
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc------------c
Confidence            9999999999998876554  6889999999999999999999999988777578999999999887            4


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----------HH-----HHHhccCCCH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----------FN-----ERFAGNLRTS  279 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~-----~~~~~~~~~~  279 (339)
                      +.++..+|++||+|+++|+|++|.|++++|||||+|+||+++||+.......           ..     ..|.+|+.+|
T Consensus       145 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p  224 (256)
T d1k2wa_         145 GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRA  224 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCH
T ss_pred             ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCH
Confidence            5788899999999999999999999999999999999999999986533211           11     1246889999


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|++++||+|+...+.++..+.+|||.
T Consensus       225 ~evA~~v~fL~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         225 EDLTGMAIFLATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             HHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhCchhCCccCceEEECcch
Confidence            99999999999976666666667889984

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=4.5e-51  Score=361.88  Aligned_cols=237  Identities=26%  Similarity=0.330  Sum_probs=208.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999998776  357889999999999999999999888


Q ss_pred             CC-CccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NK-PVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~-~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++ ++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ +.|+||++||..+.            
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~------------  149 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGA------------  149 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGT------------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-cccccccccccccc------------
Confidence            76 89999999998776554  6889999999999999999999999999887 67999999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----HHH-----HHhccCCCHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----FNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~-----~~~~~~~~~~e~A~  284 (339)
                      .+.++...|++||+|+++|+|++|.|++++|||||+|+||+|+||+.......     ..+     .+.+|+.+|+|+|+
T Consensus       150 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~  229 (259)
T d2ae2a_         150 LAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAA  229 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            35678899999999999999999999999999999999999999986543211     111     24678999999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      .++||+|+...+.++..+.+|||-.
T Consensus       230 ~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhCCCcCcEEEECCCeE
Confidence            9999999766655666667899954

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=5.2e-51  Score=359.03  Aligned_cols=235  Identities=22%  Similarity=0.303  Sum_probs=194.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++.  ..+.+++.  +.++.++.+|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999987642  22333333  357899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ ++|+||++||.++.            .
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~------------~  144 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYW------------L  144 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGG------------S
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccchhc------------c
Confidence            9999999999999876554  6889999999999999999999999999988 67999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHH-------HHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNE-------RFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++..........       .+.+++.+|||+|+.++|
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~f  224 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF  224 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHH
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHH
Confidence            5678899999999999999999999999999999999999999987654322111       134678999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      |+|+...+.++..+.+|||-.
T Consensus       225 L~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         225 LASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             HTSGGGTTCCSCEEEESSSCC
T ss_pred             HhCchhcCCcCCeEEECCCEe
Confidence            999765555556677899853

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=4.6e-51  Score=360.20  Aligned_cols=236  Identities=22%  Similarity=0.294  Sum_probs=207.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..   +.++.++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999888888743   347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.++++++|+++|+|++++.+++||++||.++.            .
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~------------~  147 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF------------V  147 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT------------S
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee------------c
Confidence            9999999999999876554  6889999999999999999999999999988566799999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHH--HcCCCeEEEEeeCCcccCCCccCcchhHH------HHHhccCCCHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEM--YKEKGIGFYSMHPGWAETPGVAKSMPSFN------ERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~~~e~A~~v~  287 (339)
                      +.++..+|++||+|+.+|+|++|.|  ++++|||||+|+||+|+||+.........      ..+.+|+.+|+|+|+.++
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~  227 (251)
T d1zk4a1         148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICV  227 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHH
T ss_pred             cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            5678899999999999999999998  56899999999999999998765532211      124678899999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+|+...+.++..+.+|||-
T Consensus       228 fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         228 YLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCcEEEECccc
Confidence            999966555555567789984

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.9e-51  Score=360.59  Aligned_cols=234  Identities=23%  Similarity=0.228  Sum_probs=206.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..  .++.++.+|++|+++++++++++.+++|++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            789999999999999999999999999999999999999999997653  478999999999999999999999999999


Q ss_pred             cEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          142 HVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       142 d~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      |+||||||+......  .+.++|++++++|+.|+++++|+++|+|.+++++++||++||.++.            .+.++
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~~~~~  147 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH------------VGNPE  147 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------------SCCTT
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc------------ccCcc
Confidence            999999998776553  6899999999999999999999999999888678999999999887            35788


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-----------HH-----HHhccCCCHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-----------NE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----------~~-----~~~~~~~~~~e~A  283 (339)
                      ..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+........           .+     .+.+|+.+|+|+|
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA  227 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVA  227 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999999999999865432211           11     1457899999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +.++||+|+...+.++..+.+|||-+
T Consensus       228 ~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         228 ACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHhCchhCCccCcEEEecCCEE
Confidence            99999999665555555667899953

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-51  Score=356.32  Aligned_cols=230  Identities=22%  Similarity=0.252  Sum_probs=201.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++       +..++.||++|+++++++++++.++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            488999999999999999999999999999999999998887776544       3567899999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+..+...  .+.++|++.+++|+.++++++|+++|+|+++ ++++|+++||.+..             
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss~~~~-------------  140 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRVYL-------------  140 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGGGG-------------
T ss_pred             cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeecccccc-------------
Confidence            9999999999999876654  7889999999999999999999999999877 67788888775433             


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....+...+.     +.+|+.+|+|+|++++||+
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~  220 (242)
T d1ulsa_         141 GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL  220 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            46778899999999999999999999999999999999999999987665443333     4578899999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      |+...+.++..+.+|||-
T Consensus       221 S~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         221 SDESSFITGQVLFVDGGR  238 (242)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             chhhCCCCCcEEEECCCc
Confidence            976665666666789985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=3.9e-51  Score=362.63  Aligned_cols=235  Identities=21%  Similarity=0.253  Sum_probs=207.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999998765  347899999999999999999999999


Q ss_pred             CCCccEEEEccccccCC-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENN-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +|++|+||||||+.... .  ..+.++|++++++|+.++++++|+++|+|.++ +.|+||++||..+.            
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~------------  146 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGV------------  146 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHH------------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechhhc------------
Confidence            99999999999987543 2  36899999999999999999999999999887 68999999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---------------hh-HHH-----HHh
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---------------PS-FNE-----RFA  273 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---------------~~-~~~-----~~~  273 (339)
                      .+.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....               ++ ..+     .|+
T Consensus       147 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  226 (260)
T d1zema1         147 KGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM  226 (260)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT
T ss_pred             cCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC
Confidence            356788999999999999999999999999999999999999999753221               11 111     246


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          274 GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|+.+|+|+|++++||+|+...+.++..+.+|||
T Consensus       227 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         227 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            7899999999999999997666566666778997

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.2e-51  Score=362.19  Aligned_cols=233  Identities=20%  Similarity=0.247  Sum_probs=204.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|+++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999888777665     246889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.++.            .
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~------------~  143 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGL------------M  143 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------S
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhc------------c
Confidence            9999999999999876553  6889999999999999999999999999988 68999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----HHHHHhccCC-CHHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----FNERFAGNLR-TSEEGADTVLWL  289 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~-~~~e~A~~v~~l  289 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.....++     ....+++|+. +|+|+|++++||
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL  223 (254)
T d1hdca_         144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHH
Confidence            5678899999999999999999999999999999999999999976543221     1223456776 699999999999


Q ss_pred             hccCCCCCCCcceeeCCCC
Q 019551          290 ALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       290 ~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+...+.++..+.+|||-
T Consensus       224 ~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         224 LSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hchhhCCCCCceEEeCCCc
Confidence            9966666666666789995

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.7e-51  Score=362.29  Aligned_cols=236  Identities=22%  Similarity=0.275  Sum_probs=187.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..  .++.++.+|++++++++++++++.++
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999987763  47999999999999999999999988


Q ss_pred             C-CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 N-KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~-~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      + |++|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ +.|+||++||..+..           
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~-----------  150 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVV-----------  150 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC-----------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-ccccccccccccccc-----------
Confidence            7 789999999998876554  6889999999999999999999999999988 679999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH------HHHHhccCCCHHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF------NERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~e~A~~v~~  288 (339)
                       +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.....++.      ...+++|+.+|||+|++++|
T Consensus       151 -~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  229 (259)
T d1xq1a_         151 -SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF  229 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHH
T ss_pred             -cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence             46778899999999999999999999999999999999999999876543321      22456889999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+...+.++..+.+|||-
T Consensus       230 L~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         230 LCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HTSGGGTTCCSCEEECCCCE
T ss_pred             HhCchhcCCcCcEEEeCCCE
Confidence            99866555555566779994

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6.2e-51  Score=360.97  Aligned_cols=233  Identities=23%  Similarity=0.315  Sum_probs=205.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999999999999999999765  347899999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHH--HHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPL--LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~--m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      ||+||||||+......  ++.++|++++++|+.++++++|+++|+  |.++ +.++||+++|..+.            .+
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~~~~------------~~  146 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGK------------QG  146 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCGGGT------------SC
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCcccccccccccc------------cc
Confidence            9999999999876654  689999999999999999999999997  4455 56899999999887            45


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhHHH-----HHhccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSFNE-----RFAGNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~~~-----~~~~~~~~~~  280 (339)
                      .++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.....           ++..+     .|++|+.+|+
T Consensus       147 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pe  226 (257)
T d2rhca1         147 VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS  226 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHH
Confidence            7889999999999999999999999999999999999999999865321           11111     1357899999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|+.++||+|+...+.++..+.+|||-
T Consensus       227 dia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         227 EVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            9999999999976666666667789984

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.3e-50  Score=353.08  Aligned_cols=232  Identities=22%  Similarity=0.253  Sum_probs=203.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVC-RSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++|||||++|||+++|++|+++|++|++.+ |+++.++++.+++.+.  +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999875 5677788888888765  347889999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +|+||||||+......  .+.++|++++++|+.++++++|+++|+|+++ ++|+||++||.++..            +.+
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~------------~~~  146 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLI------------GNI  146 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHH------------CCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhhcC------------CCC
Confidence            9999999999876654  6899999999999999999999999999987 689999999998873            467


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh-cc
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA-LQ  292 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~-s~  292 (339)
                      +..+|++||+|+.+|+|+||.|++++|||||+|+||+++||+.....++..+.     +.+|+.+|+|+|++++||+ ++
T Consensus       147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred             CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCc
Confidence            88999999999999999999999999999999999999999887765554443     3578899999999999997 54


Q ss_pred             CCCCCCCcceeeCCCC
Q 019551          293 PKEKLVSGSFYFDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~~d~~~  308 (339)
                      ...+.++..+.+|||-
T Consensus       227 ~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         227 AASYITGQAFTIDGGI  242 (244)
T ss_dssp             GGGGCCSCEEEESTTT
T ss_pred             hhcCCcCCeEEeCCCe
Confidence            4444455556779984

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-50  Score=355.16  Aligned_cols=230  Identities=23%  Similarity=0.231  Sum_probs=197.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++       ...++++|++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999999987543 33332       2456889999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|+||+||||||+..+...  .+.++|++++++|+.|+++++|+++|+|+++ ++|+||++||..+.            .
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~~~------------~  140 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGL------------F  140 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGT------------S
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-cccccccccccccc------------c
Confidence            9999999999998876544  6889999999999999999999999999887 67999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----h-hHHH-----HHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----P-SFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~-~~~~-----~~~~~~~~~~e~A~  284 (339)
                      +.++..+|++||+|+++|+|++|.|++++|||||+|+||+|+||+.....     + +..+     .+++|+.+|+|+|+
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~  220 (248)
T d2d1ya1         141 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAE  220 (248)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            56788999999999999999999999999999999999999999764321     1 1111     24578999999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .++||+++...+.++..+.+|||-
T Consensus       221 ~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         221 AVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCCCCcEEEcCcCc
Confidence            999999965555555567789985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-50  Score=352.99  Aligned_cols=225  Identities=21%  Similarity=0.261  Sum_probs=193.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+             .++..+.+|++|+++++++++++.++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999997642             35677899999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++++++|+.+++.++|+++|+|+++ +.|+||++||.++.            .
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~------------~  137 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGL------------W  137 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC--------------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhc------------c
Confidence            9999999999998776553  6889999999999999999999999999888 67899999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....+...+.     +.+|+.+|||+|++++||+
T Consensus       138 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  217 (237)
T d1uzma1         138 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA  217 (237)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            46788999999999999999999999999999999999999999876554333332     3578999999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      ++...+.++..+.+|||-
T Consensus       218 S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         218 SEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CchhcCCcCCeEEECCCC
Confidence            966555555566789983

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=359.23  Aligned_cols=263  Identities=18%  Similarity=0.240  Sum_probs=220.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC---CccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG---NENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+   +.++..+.+|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999876532   457999999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+.+|++|+||||||+......  .+.++|++++++|+.++++++|+++|.|.++ ++++||++||....          
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~ss~~~~----------  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPTKA----------  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCCCTT----------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-cccccccccccccc----------
Confidence            9999999999999998776554  6889999999999999999999999999887 67889988765432          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----H-----HHHHhccCCCHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----F-----NERFAGNLRTSEEGA  283 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~-----~~~~~~~~~~~~e~A  283 (339)
                         +.++...|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.......    .     ...+.+|+.+|+|+|
T Consensus       158 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA  234 (297)
T d1yxma1         158 ---GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS  234 (297)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred             ---cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence               4677899999999999999999999999999999999999999987543221    1     122467899999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCCC-ccc-------ccccccCCHHHHHHHHHHHHh
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEAP-KHL-------KFAATAASHARIDPIVDVLRS  334 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~~-~~~-------~~~~~~~~~~~~~~l~~~~~~  334 (339)
                      ++++||+|+...+.++..+.+|||..- .|.       .......+.+...++|+..++
T Consensus       235 ~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (297)
T d1yxma1         235 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKE  293 (297)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCchhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHH
Confidence            999999997666666667778999532 221       123334566777777776554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=9.3e-50  Score=355.50  Aligned_cols=239  Identities=21%  Similarity=0.319  Sum_probs=205.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...   ..+.++.||++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998888542   35788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNR----LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +|++|+||||||+.....    ..+.++|++++++|+.|+++++|+++|+|.++ +.|+||++||..+..+         
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~~~~~~---------  149 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTA---------  149 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTCC---------
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCcccccccccccc---------
Confidence            999999999999876442    36789999999999999999999999999887 6799999999887632         


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHHH-------HhccCCCHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNER-------FAGNLRTSEEGA  283 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~~-------~~~~~~~~~e~A  283 (339)
                        ..+....|++||+|+++|+|++|.|++++|||||+|+||+|+||+......   ...+.       +.+++.+|||+|
T Consensus       150 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA  227 (268)
T d2bgka1         150 --GEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA  227 (268)
T ss_dssp             --CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHH
T ss_pred             --ccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHH
Confidence              223345899999999999999999999999999999999999998765432   11111       346889999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCCCc
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEAPK  311 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~~~  311 (339)
                      ++++||+|+...+.++..+.+|||-...
T Consensus       228 ~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         228 DAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhChhhCCccCceEEECcCcccC
Confidence            9999999976665666667789996443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=7.1e-50  Score=354.71  Aligned_cols=248  Identities=20%  Similarity=0.300  Sum_probs=213.3

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ .++.++.+|++|+++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999988877664 57889999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+++|++|+||||||+......  .+.++|++.+++|+.|+++++|+++|+|.++..+++|++++|.........     
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-----  156 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----  156 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-----
Confidence            9999999999999998776544  688999999999999999999999999987767888888888765532100     


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVL  287 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~  287 (339)
                      ...+.++..+|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.....++..+.     +.+|+.+|+|+|+.++
T Consensus       157 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~  236 (260)
T d1h5qa_         157 SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAI  236 (260)
T ss_dssp             ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             ccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            00233567899999999999999999999999999999999999999987665544333     4578999999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ||+|+...+.++..+.+|||.
T Consensus       237 fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhcchhCCCcCceEEECCCe
Confidence            999966665556667789984

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.9e-50  Score=358.61  Aligned_cols=238  Identities=22%  Similarity=0.185  Sum_probs=201.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. .+.++.++.+|++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998763 335799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          137 KNKPVHVLVNNAGVLENNRL------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++|++|+||||||+..+...      .+.++|++++++|+.++++++|+++|+|+++ +++.|+++||.++.        
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~--------  152 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGP--------  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSS--------
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccc--------
Confidence            99999999999999765432      3556799999999999999999999999876 44444444444555        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--H----HH--------HHhccC
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--F----NE--------RFAGNL  276 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~----~~--------~~~~~~  276 (339)
                          .+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.......  .    .+        .|++|+
T Consensus       153 ----~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~  228 (272)
T d1xkqa_         153 ----QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAA  228 (272)
T ss_dssp             ----SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             ----cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCC
Confidence                35788899999999999999999999999999999999999999987543211  0    11        135789


Q ss_pred             CCHHHHHHHHHHHhccCCCCC-CCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKL-VSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~-~~G~~~~d~~~  308 (339)
                      .+|+|+|++++||+|++...+ ++..+.+|||-
T Consensus       229 g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~  261 (272)
T d1xkqa_         229 GKPEHIANIILFLADRNLSFYILGQSIVADGGT  261 (272)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence            999999999999998655444 45556779994

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.1e-50  Score=356.41  Aligned_cols=237  Identities=22%  Similarity=0.249  Sum_probs=195.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.... +..++.++.+|++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4889999999999999999999999999999999999999999999998764 335799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCC------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcc-ccccccCcc
Q 019551          137 KNKPVHVLVNNAGVLENNR------LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGG-MYTAHLTDD  209 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~-~~~~~~~~~  209 (339)
                      ++|++|+||||||+..+..      ..+.++|++.+++|+.++++++|+++|+|+++  .+++|+++|.. +.       
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S~~~~~-------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGL-------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSS-------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeeeecccc-------
Confidence            9999999999999865432      24778999999999999999999999999876  35566666654 44       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---------hH-----HHHHhcc
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---------SF-----NERFAGN  275 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---------~~-----~~~~~~~  275 (339)
                           .+.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++......         ..     ...|.+|
T Consensus       153 -----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  227 (264)
T d1spxa_         153 -----HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV  227 (264)
T ss_dssp             -----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS
T ss_pred             -----ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence                 3567889999999999999999999999999999999999999998754311         00     1124678


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCc-ceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSG-SFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G-~~~~d~~~  308 (339)
                      +.+|+|+|++++||+|++...+++| .+.+|||-
T Consensus       228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence            9999999999999998664555555 56779984

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-50  Score=353.74  Aligned_cols=230  Identities=23%  Similarity=0.305  Sum_probs=199.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++      .++.++.+|++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999999998887776654      25788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      +|++|+||||||+.....   ..+.++|++++++|+.++++++|+++|+|+++  +|+||++||..+..           
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~-----------  143 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI-----------  143 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH-----------
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccc-----------
Confidence            999999999999765432   36889999999999999999999999999875  58999999998873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc---h---hHH-----HHHhccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM---P---SFN-----ERFAGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~---~---~~~-----~~~~~~~~~~~e~A  283 (339)
                       +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.....   +   ...     ..+++|+.+|+|+|
T Consensus       144 -~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva  222 (250)
T d1ydea1         144 -GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVG  222 (250)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             -cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHH
Confidence             46788999999999999999999999999999999999999999865321   1   111     12467899999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++||+++ ..+.++..+.+|||.
T Consensus       223 ~~v~fL~Sd-a~~itG~~i~vDGG~  246 (250)
T d1ydea1         223 AAAVFLASE-ANFCTGIELLVTGGA  246 (250)
T ss_dssp             HHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred             HHHHHHhCc-cCCCcCCeEEECCCc
Confidence            999999985 554455556789985

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-49  Score=347.52  Aligned_cols=232  Identities=20%  Similarity=0.226  Sum_probs=199.1

Q ss_pred             cccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           55 MQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      |+..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..+.+|++|++++++++   
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~d~~~v~~~~---   71 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP------GIEPVCVDLGDWEATERAL---   71 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHH---
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCHHHHHHHH---
Confidence            3456899999999999999999999999999999999999998887776642      4677889999999987766   


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                       ++++++|+||||||+......  .+.++|++.+++|+.++++++|+++|.|.+++..|+||++||.++.          
T Consensus        72 -~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------  140 (244)
T d1pr9a_          72 -GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ----------  140 (244)
T ss_dssp             -TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT----------
T ss_pred             -HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc----------
Confidence             457899999999999876554  6889999999999999999999999987666578999999999887          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHH-----HHhccCCCHHHHHHH
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNE-----RFAGNLRTSEEGADT  285 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~-----~~~~~~~~~~e~A~~  285 (339)
                        .+.++..+|++||+|+++|+|++|.|++++|||||+|+||+|+|++......+  ..+     .+.+|+.+|+|+|+.
T Consensus       141 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~  218 (244)
T d1pr9a_         141 --RAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNA  218 (244)
T ss_dssp             --SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             --ccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence              35678899999999999999999999999999999999999999987654322  111     245789999999999


Q ss_pred             HHHHhccCCCCCCCcceeeCCCC
Q 019551          286 VLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++||+|+...+.++..+.+|||-
T Consensus       219 v~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         219 ILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCcCCcEEEECccH
Confidence            99999976655566667789984

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-49  Score=355.31  Aligned_cols=238  Identities=22%  Similarity=0.217  Sum_probs=204.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+... ..++.++.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999987643 35789999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC----CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRL----ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~----~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      ++|++|+||||||.......    .+.++|++.+++|+.+++.++|+++|+|+++ ++++|+++||.++.          
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss~~~~----------  149 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGP----------  149 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSS----------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhhhhcc----------
Confidence            99999999999997654322    4678999999999999999999999999877 67888888887765          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----h-HHH--------HHhccCCC
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----S-FNE--------RFAGNLRT  278 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~-~~~--------~~~~~~~~  278 (339)
                        .+.++..+|++||+|+.+|+|++|.|++++|||||+|+||+|+||+......     + ..+        .|.+|+.+
T Consensus       150 --~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~  227 (274)
T d1xhla_         150 --QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK  227 (274)
T ss_dssp             --SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             --ccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcC
Confidence              3567889999999999999999999999999999999999999997654321     1 111        14678999


Q ss_pred             HHHHHHHHHHHhccCCCC-CCCcceeeCCCC
Q 019551          279 SEEGADTVLWLALQPKEK-LVSGSFYFDRAE  308 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~-~~~G~~~~d~~~  308 (339)
                      |+|+|+.++||+|++... .++..+.+|||.
T Consensus       228 pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         228 PEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence            999999999999854444 455556779995

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.1e-50  Score=353.75  Aligned_cols=233  Identities=23%  Similarity=0.283  Sum_probs=201.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988887776     346788999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+..+...  .+.++|++++++|+.++++++|+++|+|+++  +|+||++||..+.            .
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~------------~  143 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSW------------L  143 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGT------------S
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhh------------c
Confidence            9999999999998876543  6889999999999999999999999999754  6999999999887            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCC--CeEEEEeeCCcccCCCccCcchh--HHHH--------HhccCCCHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEK--GIGFYSMHPGWAETPGVAKSMPS--FNER--------FAGNLRTSEEGA  283 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~--gI~v~~v~PG~v~T~~~~~~~~~--~~~~--------~~~~~~~~~e~A  283 (339)
                      +.++..+|++||+|+.+|+|++|.|++++  |||||+|+||+|+|++.....++  ..+.        +.+++.+|||+|
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA  223 (253)
T d1hxha_         144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHH
Confidence            56788999999999999999999999874  59999999999999986543221  1111        235778999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++++||+|+...+.++..+.+|||-.
T Consensus       224 ~~v~fL~S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         224 QLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             HHHHHHhChhhCCCcCcEEEECccHh
Confidence            99999999766655566677899943

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-49  Score=345.98  Aligned_cols=229  Identities=22%  Similarity=0.271  Sum_probs=197.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..+.+|++|++++++++    ++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~~~~~v~~~~----~~   71 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP------GIEPVCVDLGDWDATEKAL----GG   71 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHH----TT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCHHHHHHHH----HH
Confidence            4899999999999999999999999999999999999988877766542      4678899999999987665    45


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||+......  .+.++|++.+++|+.++++++|+++|.|.+++.+|+||+++|.++.            .
T Consensus        72 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~------------~  139 (242)
T d1cyda_          72 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH------------V  139 (242)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------S
T ss_pred             cCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc------------c
Confidence            7999999999998776543  6899999999999999999999999988776578999999999877            3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHH-----HHHhccCCCHHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFN-----ERFAGNLRTSEEGADTVLW  288 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~-----~~~~~~~~~~~e~A~~v~~  288 (339)
                      +.++..+|++||+|+.+|+|+||.|++++|||||+|+||+++||+.....  ++..     ..+.+|+.+|||+|++++|
T Consensus       140 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~f  219 (242)
T d1cyda_         140 TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF  219 (242)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             cCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999865432  2222     2246889999999999999


Q ss_pred             HhccCCCCCCCcceeeCCCC
Q 019551          289 LALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       289 l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+++...+.++..+.+|||-
T Consensus       220 L~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         220 LLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHSGGGTTCCSSEEEESTTG
T ss_pred             HhCchhcCcCCceEEeCcch
Confidence            99876555555567789984

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.3e-49  Score=344.57  Aligned_cols=228  Identities=22%  Similarity=0.286  Sum_probs=203.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCE-------EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGAT-------VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~-------Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++||||||++|||+++|++|+++|++       |++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999997       999999999999999998765  357889999999999999999999


Q ss_pred             hcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccc
Q 019551          135 SLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEF  212 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~  212 (339)
                      .+++|++|+||||||+......  .+.++|++++++|+.|+++++|+++|+|+++ ++|+||++||.++.          
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~----------  148 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAAT----------  148 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT----------
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhc----------
Confidence            9999999999999999876654  6899999999999999999999999999987 67999999999887          


Q ss_pred             cCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          213 NSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       213 ~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                        .+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+.....++    ...++.+|||+|+.++||+++
T Consensus       149 --~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~----~~~~~~~PedvA~~v~~l~s~  222 (240)
T d2bd0a1         149 --KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE----MQALMMMPEDIAAPVVQAYLQ  222 (240)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST----TGGGSBCHHHHHHHHHHHHTS
T ss_pred             --CCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh----hHhcCCCHHHHHHHHHHHHcC
Confidence              45788999999999999999999999999999999999999999998765332    235678999999999999998


Q ss_pred             CCCCCCCccee-eCCCC
Q 019551          293 PKEKLVSGSFY-FDRAE  308 (339)
Q Consensus       293 ~~~~~~~G~~~-~d~~~  308 (339)
                      +...++++..+ .++|+
T Consensus       223 ~~~~~~~~~~i~p~~G~  239 (240)
T d2bd0a1         223 PSRTVVEEIILRPTSGD  239 (240)
T ss_dssp             CTTEEEEEEEEEETTCC
T ss_pred             CccCccCCEEEEecCCC
Confidence            77766666444 36654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.1e-48  Score=346.28  Aligned_cols=236  Identities=25%  Similarity=0.368  Sum_probs=204.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..  ..++++.+|++++++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999998887663  47888999999999999999999988


Q ss_pred             C-CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 N-KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~-~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      + +.+|+||||||.......  ++.++|++++++|+.++++++++++|.|.++ ..|+||++||..+.            
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~isS~~~~------------  147 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGF------------  147 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGT------------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-cccccccccccccc------------
Confidence            7 689999999999876654  6889999999999999999999999999988 78999999999987            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHHH-----HHhccCCCHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFNE-----RFAGNLRTSEEGA  283 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~-----~~~~~~~~~~e~A  283 (339)
                      .+.++...|+++|+|+++|+|.||.|++++|||||+|+||+++||+......      +..+     .+++|+.+|+|+|
T Consensus       148 ~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA  227 (258)
T d1ae1a_         148 SALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVS  227 (258)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence            4578899999999999999999999999999999999999999998765422      1111     2458899999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++||+|+.....++..+.+|||-
T Consensus       228 ~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         228 ALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhChhhCCCcCcEEEeCCCe
Confidence            9999999876666666678889984

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-48  Score=343.24  Aligned_cols=229  Identities=21%  Similarity=0.242  Sum_probs=201.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++.+|++|+++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            69999999999999999999999999999999999999999999998877777899999999999999999999999999


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccCCCC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNSGSF  217 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~  217 (339)
                      ++|+||||||+..      .++|++.+++|+.+++.++++++|+|.++.  .+|+||++||.++.            .+.
T Consensus        82 ~iDilVnnAg~~~------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~------------~~~  143 (254)
T d2gdza1          82 RLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL------------MPV  143 (254)
T ss_dssp             CCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------------SCC
T ss_pred             CcCeecccccccc------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc------------cCC
Confidence            9999999999864      356999999999999999999999997653  35899999999987            357


Q ss_pred             cchHHHHHhHHHHHHHHHH--HHHHHcCCCeEEEEeeCCcccCCCccCcchh--------H-----HHHHhccCCCHHHH
Q 019551          218 DGMEQYARNKRVQVALTEK--WSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--------F-----NERFAGNLRTSEEG  282 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~--la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--------~-----~~~~~~~~~~~~e~  282 (339)
                      ++..+|++||+|+.+|+|+  |+.|++++|||||+|+||+|+||+.+....+        .     ...+.+++.+|+|+
T Consensus       144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  223 (254)
T d2gdza1         144 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLI  223 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHH
Confidence            8889999999999999997  7889999999999999999999987543211        1     12346789999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++++||++++  ..++..+.+|||.
T Consensus       224 A~~v~fL~s~~--~itG~~i~VdGG~  247 (254)
T d2gdza1         224 ANGLITLIEDD--ALNGAIMKITTSK  247 (254)
T ss_dssp             HHHHHHHHHCT--TCSSCEEEEETTT
T ss_pred             HHHHHHHHcCC--CCCCCEEEECCCC
Confidence            99999999853  3455555679984

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-47  Score=338.91  Aligned_cols=237  Identities=23%  Similarity=0.250  Sum_probs=204.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+..+..++.++.||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999999887667899999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      ++|+||+||||||.......  .+.++|++.+++|+.++++++++++|.|+++. .+|+||++||.++...         
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------  156 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------  156 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------
Confidence            99999999999998876554  78999999999999999999999999998764 4799999999887632         


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHH--cCCCeEEEEeeCCcccCCCccCcchh-----HHHHHhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMY--KEKGIGFYSMHPGWAETPGVAKSMPS-----FNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~e~A~~v  286 (339)
                       .+.++...|+++|+|+.+|+|+|+.|+  +++||+||+|+||.++|++.....+.     ....+.+++.+|+|+|+++
T Consensus       157 -~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         157 -LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  235 (257)
T ss_dssp             -CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             -CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHH
Confidence             245677889999999999999999998  78999999999999999976543322     2223467899999999999


Q ss_pred             HHHhccCCCCCCCcceee
Q 019551          287 LWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~  304 (339)
                      +||++++.. +++|+.++
T Consensus       236 ~fL~s~~a~-~itG~i~i  252 (257)
T d1xg5a_         236 IYVLSTPAH-IQIGDIQM  252 (257)
T ss_dssp             HHHHHSCTT-EEEEEEEE
T ss_pred             HHHhCChhc-CeECCEEE
Confidence            999997654 45565543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=9.1e-48  Score=337.02  Aligned_cols=230  Identities=24%  Similarity=0.299  Sum_probs=199.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999998877666554     347889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|++|+||||||.......  .+.++|++++++|+.+++.++|+++|+|.+   .+.|+++||.+..             
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a~~-------------  140 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAGL-------------  140 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCTTC-------------
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc---ccceeeccccccc-------------
Confidence            9999999999998776553  688999999999999999999999998864   3667777776554             


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----HhccCCCHHHHHHHHHHHh
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~e~A~~v~~l~  290 (339)
                      +.+++..|+++|+|+++|+|+||.|++++|||||+|+||+++|++.....++..+.     +.+++.+|+|+|++++||+
T Consensus       141 ~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         141 GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL  220 (241)
T ss_dssp             CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             cccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence            34788899999999999999999999999999999999999999887655443333     4578899999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.....++..+.+|||.
T Consensus       221 S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGR  238 (241)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             cchhCCCcCceEEeCCCc
Confidence            976666666778889984

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.6e-47  Score=340.75  Aligned_cols=232  Identities=19%  Similarity=0.244  Sum_probs=196.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++++++++++++++.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999998888776654     247889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC-------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc
Q 019551          138 NKPVHVLVNNAGVLENNRL-------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL  210 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~-------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~  210 (339)
                      ++++|+||||||+......       .+.+.|++++++|+.|+++++|+++|+|+++  +|+||+++|..+.        
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~--------  146 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGF--------  146 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGT--------
T ss_pred             hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhc--------
Confidence            9999999999998754432       2335699999999999999999999999876  4889999998776        


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch----------hHHH-----HHhcc
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP----------SFNE-----RFAGN  275 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~-----~~~~~  275 (339)
                          .+.++..+|++||+|+.+|+|+||.|+++ +||||+|+||+|+|++......          +..+     .|.+|
T Consensus       147 ----~~~~~~~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  221 (276)
T d1bdba_         147 ----YPNGGGPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR  221 (276)
T ss_dssp             ----STTSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS
T ss_pred             ----cCCCCCchHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC
Confidence                35678899999999999999999999987 4999999999999998654321          1111     14578


Q ss_pred             CCCHHHHHHHHHHHhccCC-CCCCCcceeeCCCCC
Q 019551          276 LRTSEEGADTVLWLALQPK-EKLVSGSFYFDRAEA  309 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~-~~~~~G~~~~d~~~~  309 (339)
                      +.+|+|+|++++||++++. .+.++..+.+|||-.
T Consensus       222 ~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         222 MPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             CCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             CcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            9999999999999998544 445555667799954

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.2e-47  Score=336.94  Aligned_cols=226  Identities=16%  Similarity=0.175  Sum_probs=194.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.... ..       +..+|+++.++++++++++.+++|+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-Cc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999999999988877664432 22       235899999999999999999999999


Q ss_pred             EEEEccccccCC-C--CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          143 VLVNNAGVLENN-R--LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       143 ~lInnAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      +||||||+.... +  ..+.++|++.+++|+.++++++|+++|+|+++ +.|+||++||.++.            .+.++
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~~~~------------~~~~~  140 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPF------------GPWKE  140 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTT------------SCCTT
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeecccccccc------------ccccc
Confidence            999999986543 2  36889999999999999999999999999988 67999999999887            35678


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--------hHHH-----HHhccCCCHHHHHHHH
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--------SFNE-----RFAGNLRTSEEGADTV  286 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--------~~~~-----~~~~~~~~~~e~A~~v  286 (339)
                      ..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.....+        +..+     .+++|+.+|+|+|+++
T Consensus       141 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v  220 (252)
T d1zmta1         141 LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELV  220 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            89999999999999999999999999999999999999998765422        1111     2357899999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCC
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      +||+|+...+.++..+.+|||-.
T Consensus       221 ~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         221 AFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHhCchhcCCcCCeEEECCCce
Confidence            99999766666666677899953

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.6e-46  Score=327.77  Aligned_cols=220  Identities=23%  Similarity=0.295  Sum_probs=185.1

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.           ...++.+|+++.  +    +.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----------~~~~~~~Dv~~~--~----~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------GHRYVVCDLRKD--L----DLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----------CSEEEECCTTTC--H----HHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----------CCcEEEcchHHH--H----HHHHHHh
Confidence            6899999999999999999999999999999999997654421           234677999864  3    3444567


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +++|+||||||+......  .+.++|++.+++|+.+++.++|+++|+|+++ +.|+||+++|..+.            .+
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~~~~------------~~  131 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVI------------SP  131 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------SC
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-cccccccccccccc------------cc
Confidence            899999999998765543  6889999999999999999999999999987 67999999998776            35


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhH-HH-----HHhccCCCHHHHHHHHHHHh
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSF-NE-----RFAGNLRTSEEGADTVLWLA  290 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~-----~~~~~~~~~~e~A~~v~~l~  290 (339)
                      .++...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.....++. .+     .+.+|+.+|||+|+.++||+
T Consensus       132 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~  211 (234)
T d1o5ia_         132 IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC  211 (234)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            6788899999999999999999999999999999999999999876543322 12     24578999999999999999


Q ss_pred             ccCCCCCCCcceeeCCCC
Q 019551          291 LQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~~  308 (339)
                      |+...+.+++.+.+|||-
T Consensus       212 S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         212 SEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             ChhhcCCcCcEEEECccc
Confidence            866555555566789995

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=6.7e-47  Score=335.34  Aligned_cols=234  Identities=18%  Similarity=0.214  Sum_probs=197.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCR-SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      |+||+||||||++|||+++|+.|+++|++|++++| +.+.++++.+++.+..  .++.++.+|++|+++++++++++.++
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC--CCceEecCCCCCHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999998764 5555677777776653  47899999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      +|+||+||||||+......  .+.++|++.+++|+.++++++|+++|+|+++   +++++++|..+..           .
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~~-----------~  147 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVM-----------T  147 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGTC-----------C
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Ccccccccccccc-----------c
Confidence            9999999999999876654  6889999999999999999999999999754   6777777765542           3


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-------------hhHHH-----HHhccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-------------PSFNE-----RFAGNLR  277 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-------------~~~~~-----~~~~~~~  277 (339)
                      +.+++..|++||+|+++|+|+||.|++++|||||+|+||+++|++.....             ++..+     .+.+|+.
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g  227 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG  227 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCB
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCc
Confidence            56788999999999999999999999999999999999999998753211             11111     2457899


Q ss_pred             CHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          278 TSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       278 ~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+|+|++++||+|+.....++..+.+|||.
T Consensus       228 ~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         228 YPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            9999999999999976655555666779985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.2e-46  Score=337.16  Aligned_cols=254  Identities=19%  Similarity=0.220  Sum_probs=208.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC---------chhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS---------KEKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++...     .....+|++|.++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHHH
Confidence            4899999999999999999999999999999998765         44566666666543     234568999999999


Q ss_pred             HHHHHHhcCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                      ++++++.+++|+||+||||||+.....+  .+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||.++..   
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~~~~---  154 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIY---  154 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHH---
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChhhcC---
Confidence            9999999999999999999999876654  6889999999999999999999999999988 679999999998873   


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHH
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v  286 (339)
                               +.++..+|++||+|+.+|+++|+.|++++|||||+|+||++.|++......+     ..+..+|+|+|+.+
T Consensus       155 ---------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~-----~~~~~~PedvA~~v  220 (302)
T d1gz6a_         155 ---------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPED-----LVEALKPEYVAPLV  220 (302)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHH-----HHHHSCGGGTHHHH
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHh-----hHhcCCHHHHHHHH
Confidence                     4678899999999999999999999999999999999999988764433222     23446899999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCCCcc---------cccccccCCHHHHHHHHHHHHhh
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEAPKH---------LKFAATAASHARIDPIVDVLRSM  335 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~  335 (339)
                      +||+++. ..++++.+.+|||-+...         +.......+++...+-|+.+.+.
T Consensus       221 ~fL~S~~-a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~  277 (302)
T d1gz6a_         221 LWLCHES-CEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  277 (302)
T ss_dssp             HHHTSTT-CCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             HHHcCCC-cCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence            9999854 455555566799954321         11123456777888888876543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.2e-46  Score=338.23  Aligned_cols=262  Identities=19%  Similarity=0.228  Sum_probs=215.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ .++.++.+|+++.++++++++.+.+.
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g-~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC-CceEEEEecccChHHHHHHhhhhhhh
Confidence            69999999999999999999999999999999999999999999999987764 57889999999999999999999999


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||.......  .+.+++++.+.+|..+.+.+++...+.+......+.+++++|..+..            
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~------------  168 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET------------  168 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH------------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh------------
Confidence            9999999999998776543  57889999999999999999999988887776778889888887763            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch---hHHH-----HHhccCCCHHHHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP---SFNE-----RFAGNLRTSEEGADTVL  287 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~---~~~~-----~~~~~~~~~~e~A~~v~  287 (339)
                      +.++..+|++||+|+++|+|++|.|++++|||||+|+||+|+|++......   ...+     .+.+|+.+|+|+|+.++
T Consensus       169 ~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~  248 (294)
T d1w6ua_         169 GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA  248 (294)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHH
Confidence            456788999999999999999999999999999999999999998754421   2222     24578999999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCCCcccccccccCC-HHHHHHHHHHHHhh
Q 019551          288 WLALQPKEKLVSGSFYFDRAEAPKHLKFAATAAS-HARIDPIVDVLRSM  335 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~  335 (339)
                      ||+++...+.++..+.+|||..   ...+....+ ....++.|+.+|+|
T Consensus       249 fL~sd~s~~itG~~i~vDGG~~---l~~~~~~~~~~~~~~~~~~~~~~~  294 (294)
T d1w6ua_         249 FLCSDYASWINGAVIKFDGGEE---VLISGEFNDLRKVTKEQWDTIEEL  294 (294)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHH---HHHHSTTGGGGGCCHHHHHHHTTC
T ss_pred             HHhCchhcCCCCcEEEECCChh---heeCCCCCchhhcchhhhhhHhhC
Confidence            9999765556666677899952   111111122 23357778888765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-46  Score=331.41  Aligned_cols=235  Identities=16%  Similarity=0.156  Sum_probs=191.3

Q ss_pred             ccccCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           56 QARIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        56 ~~~l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ..+|+||++|||||+|  |||+++|++|+++|++|++++|+++..++ .+++....+  ...++.+|++|++++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALG--GALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTT--CCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccC--cccccccccCCHHHHHHHHHH
Confidence            3469999999999987  99999999999999999999998765444 344444432  567889999999999999999


Q ss_pred             HhcCCCCccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC
Q 019551          134 FSLKNKPVHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT  207 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~  207 (339)
                      +.+++|++|+||||||+....      ...+.++|+..+++|+.+++.++|+++|+|++   +|+||++||..+.     
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~-----  151 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASE-----  151 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGT-----
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhc-----
Confidence            999999999999999986421      23577889999999999999999999999864   4899999999887     


Q ss_pred             ccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH-----HHhccCCCHH
Q 019551          208 DDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE-----RFAGNLRTSE  280 (339)
Q Consensus       208 ~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~-----~~~~~~~~~~  280 (339)
                             .+.++..+|++||+|+++|+|++|.|++++|||||+|+||+++|++.....  ++..+     .+++|+.+|+
T Consensus       152 -------~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  224 (256)
T d1ulua_         152 -------KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE  224 (256)
T ss_dssp             -------SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH
Confidence                   356788999999999999999999999999999999999999999876542  22222     2468899999


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+|++++||+|+.....++..+.+|||-
T Consensus       225 dvA~~v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         225 EVGNLGLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhCCccCCeEEECcCE
Confidence            9999999999966655555567789984

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-45  Score=323.97  Aligned_cols=217  Identities=24%  Similarity=0.282  Sum_probs=194.6

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999999999999999765  35799999999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++|++|+||||||+......  .+.++|++++++|+.|+++++++++|.|+++ +.|+||++||.++.            
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~------------  147 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGH------------  147 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-C------------
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhc------------
Confidence            99999999999999876654  5778899999999999999999999999887 67999999999987            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcC---CCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKE---KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~---~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .+.+++++|++||+|+.+|+++|+.|+++   +||+||+|+||+|+|++.+...     ....+..+||++|+.++..+.
T Consensus       148 ~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~-----~~~~~~~~pe~va~~i~~~~~  222 (244)
T d1yb1a_         148 VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS-----TSLGPTLEPEEVVNRLMHGIL  222 (244)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-----HHHCCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-----ccccCCCCHHHHHHHHHHHHh
Confidence            45788999999999999999999999876   5899999999999999876532     234567899999999998775


Q ss_pred             cC
Q 019551          292 QP  293 (339)
Q Consensus       292 ~~  293 (339)
                      .+
T Consensus       223 ~~  224 (244)
T d1yb1a_         223 TE  224 (244)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.4e-46  Score=330.63  Aligned_cols=236  Identities=20%  Similarity=0.216  Sum_probs=199.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.  +.++.++.+|++|+++++++++++.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHH
Confidence            459999999999999999999999999999999998874 5566677777665  3478999999999999999999999


Q ss_pred             cCCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          136 LKNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      +.+|++|++|||+|.......  .+.++|++.+++|+.+++.++|+++|+|.+   .+++++++|..+..          
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~----------  158 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQA----------  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTC----------
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---cccccccccccccc----------
Confidence            999999999999998776654  688999999999999999999999999975   47888888876542          


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----------hhH-------HHHHhcc
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----------PSF-------NERFAGN  275 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----------~~~-------~~~~~~~  275 (339)
                       .+.++...|+++|+|+++|+|++|.|++++|||||+|+||+|+|++.....           ++.       ...+++|
T Consensus       159 -~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  237 (272)
T d1g0oa_         159 -KAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR  237 (272)
T ss_dssp             -SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS
T ss_pred             -ccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCC
Confidence             245778899999999999999999999999999999999999998753321           111       0124588


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +.+|+|+|++++||+++...+.++..+.+|||.
T Consensus       238 ~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         238 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            999999999999999966555555557789985

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-44  Score=321.26  Aligned_cols=230  Identities=20%  Similarity=0.252  Sum_probs=198.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLAS---RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~---~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      .|+||++|||||++|||+++|++|++   +|++|++++|++++++++.+++...+++.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            47899999999999999999999996   799999999999999999999998887789999999999999999999988


Q ss_pred             hc----CCCCccEEEEccccccCCC-----CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEEcCcccccc
Q 019551          135 SL----KNKPVHVLVNNAGVLENNR-----LITSEGFELNFAVNVLGTYTITESMVPLLEKAA-PDARVITVSSGGMYTA  204 (339)
Q Consensus       135 ~~----~~~~id~lInnAG~~~~~~-----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~~~~Iv~vsS~~~~~~  204 (339)
                      .+    .++.+|+||||||...+..     ..+.++|++++++|+.++++++|+++|+|++++ ..++||++||.++.  
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~--  160 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL--  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT--
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc--
Confidence            76    3468999999999865332     367899999999999999999999999998763 25899999999887  


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHH-----HHhc
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNE-----RFAG  274 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~-----~~~~  274 (339)
                                .+.+++.+|++||+|+++|+|+||.|  ++|||||+|+||+|+|++.....     ++..+     .+.+
T Consensus       161 ----------~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
T d1oaaa_         161 ----------QPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG  228 (259)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTT
T ss_pred             ----------CCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCC
Confidence                      45788999999999999999999999  67999999999999999764321     12111     2457


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCccee
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFY  303 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~  303 (339)
                      ++.+|+|+|+.+++|+++ . .+++|..+
T Consensus       229 r~~~p~evA~~i~~ll~~-~-s~~TG~~i  255 (259)
T d1oaaa_         229 ALVDCGTSAQKLLGLLQK-D-TFQSGAHV  255 (259)
T ss_dssp             CSBCHHHHHHHHHHHHHH-C-CSCTTEEE
T ss_pred             CCCCHHHHHHHHHHHhhh-c-cCCCCCeE
Confidence            889999999999999975 3 46777654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-45  Score=320.72  Aligned_cols=228  Identities=22%  Similarity=0.329  Sum_probs=191.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++++++..    +.   ..+....+|+.+.+.++...+    .
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~----~~---~~~~~~~~d~~~~~~~~~~~~----~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----KY---PGIQTRVLDVTKKKQIDQFAN----E   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----GS---TTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hc---cCCceeeeecccccccccccc----c
Confidence            489999999999999999999999999999999999987765432    22   357788899988777665554    4


Q ss_pred             CCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          138 NKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++++|+||||||.......  .+.++|++.+++|+.+++.++|+++|+|.++ +.|+||+++|..+..           .
T Consensus        72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~~-----------~  139 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSV-----------K  139 (245)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTT-----------B
T ss_pred             cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhhcc-----------C
Confidence            5799999999999877554  6889999999999999999999999999888 679999999987642           2


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch------hHHH-----HHhccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP------SFNE-----RFAGNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~-----~~~~~~~~~~e~A~  284 (339)
                      +.++..+|+++|+|+++|+|+||.|++++|||||+|+||+|+||+......      ...+     .+.+|+.+|+|+|+
T Consensus       140 ~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~  219 (245)
T d2ag5a1         140 GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (245)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            467888999999999999999999999999999999999999998654321      1111     24578999999999


Q ss_pred             HHHHHhccCCCCCCCcceeeCCCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+.||+++.....++..+.+|||.
T Consensus       220 ~v~fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         220 LCVYLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhChhhCCCcCceEEeCCCc
Confidence            999999966666666667789984

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.1e-44  Score=319.67  Aligned_cols=230  Identities=20%  Similarity=0.321  Sum_probs=194.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC-CHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS-SITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~  136 (339)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++.++. +++....++.++.++.+|++ +.++++++++++.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999988875544 55666666778999999998 67789999999999


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC--CCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAA--PDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      ++++||+||||||..      +.+.|++++++|+.|++.++++++|+|.+++  ++|+||++||..+.            
T Consensus        81 ~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~------------  142 (254)
T d1sbya1          81 QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------------  142 (254)
T ss_dssp             HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------------
T ss_pred             HcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc------------
Confidence            999999999999964      5688999999999999999999999997653  46899999999987            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc------hhHHHHH-hccCCCHHHHHHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM------PSFNERF-AGNLRTSEEGADTVL  287 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~------~~~~~~~-~~~~~~~~e~A~~v~  287 (339)
                      .+.+++.+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.+...      +...+.+ ..+..+||++|+.++
T Consensus       143 ~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~  222 (254)
T d1sbya1         143 NAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHH
Confidence            457889999999999999999999999999999999999999999754321      1222333 345678999999999


Q ss_pred             HHhccCCCCCCCcceeeCCCCC
Q 019551          288 WLALQPKEKLVSGSFYFDRAEA  309 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~d~~~~  309 (339)
                      ++++..   .++..+.+|||..
T Consensus       223 ~~~~~~---~tG~vi~vdgG~l  241 (254)
T d1sbya1         223 KAIEAN---KNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHHC---CTTCEEEEETTEE
T ss_pred             HhhhCC---CCCCEEEECCCEe
Confidence            887532   2344456799853

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-44  Score=319.40  Aligned_cols=234  Identities=23%  Similarity=0.310  Sum_probs=193.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.+++.+..  .++.++.||++|.++++++++++.+++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            46699999999999999999986 8999999999999999999998774  46888999999999999999999999999


Q ss_pred             ccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc--------
Q 019551          141 VHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL--------  210 (339)
Q Consensus       141 id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~--------  210 (339)
                      ||+||||||+......  .+.++|+.+|++|++|++++++.++|+|++   .|+||++||..+..+......        
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhcc
Confidence            9999999999876544  456789999999999999999999999964   489999999876532111000        


Q ss_pred             ---------------------cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcC----CCeEEEEeeCCcccCCCccCcc
Q 019551          211 ---------------------EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKE----KGIGFYSMHPGWAETPGVAKSM  265 (339)
Q Consensus       211 ---------------------~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~----~gI~v~~v~PG~v~T~~~~~~~  265 (339)
                                           ........+..+|++||+++.+|++.++.|+++    .||+||+|+||+|+|+|.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~  238 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA  238 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc
Confidence                                 000112233457999999999999999999875    4999999999999999876432


Q ss_pred             hhHHHHHhccCCCHHHHHHHHHHHhc-cCCCCCCCcceeeCCCCCC
Q 019551          266 PSFNERFAGNLRTSEEGADTVLWLAL-QPKEKLVSGSFYFDRAEAP  310 (339)
Q Consensus       266 ~~~~~~~~~~~~~~~e~A~~v~~l~s-~~~~~~~~G~~~~d~~~~~  310 (339)
                                ..+|+|+|++++|++. ++.....+|.|+.|++..+
T Consensus       239 ----------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~  274 (275)
T d1wmaa1         239 ----------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ  274 (275)
T ss_dssp             ----------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEEC
T ss_pred             ----------cCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEec
Confidence                      3689999999999985 3445567899998876543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=311.54  Aligned_cols=219  Identities=22%  Similarity=0.230  Sum_probs=176.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEE---EecCchhHHHHHHHHHhh-cCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYM---VCRSKEKGETALSAIRSK-TGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl---~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .|+||||||++|||+++|++|+++|++|++   ++|+.+..+++.+...+. ..+.++.++.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            478999999999999999999999997554   456555444443333322 2245899999999999999999987743


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                        +.+|+||||||.......  .+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||.++.            
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~~g~------------  146 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGL------------  146 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGT------------
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEechhhc------------
Confidence              789999999998876654  6889999999999999999999999999987 67999999999987            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----------------------HHHHH
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----------------------FNERF  272 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----------------------~~~~~  272 (339)
                      .+.++...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.......                      ....+
T Consensus       147 ~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T d1jtva_         147 MGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF  226 (285)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh
Confidence            35788899999999999999999999999999999999999999987653211                      01112


Q ss_pred             hccCCCHHHHHHHHHHHhccCC
Q 019551          273 AGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      .++..+|||+|+.|++++..+.
T Consensus       227 ~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         227 REAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             HHHCBCHHHHHHHHHHHHHCSS
T ss_pred             cccCCCHHHHHHHHHHHHhCCC
Confidence            3567899999999999997543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-42  Score=301.64  Aligned_cols=225  Identities=22%  Similarity=0.281  Sum_probs=188.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.     .......+|+.+.+++++..+.+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-----NNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-----CCcccccccccccccccccccccccc
Confidence            4899999999999999999999999999999999999999998887763     46778899999999999999999888


Q ss_pred             CCCccEEEEccccccCCC--------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcCcccccc
Q 019551          138 NKPVHVLVNNAGVLENNR--------LITSEGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSSGGMYTA  204 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~--------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS~~~~~~  204 (339)
                      ++.+|.+++|+++.....        ..+.++|++++++|+.++++++|+++|+|..+     .++|+||++||..+.. 
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-  155 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-  155 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-
Confidence            889999999988765432        24678999999999999999999999998643     2468999999999873 


Q ss_pred             ccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----H-hccCCC
Q 019551          205 HLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----F-AGNLRT  278 (339)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~-~~~~~~  278 (339)
                                 +.+++.+|++||+|+++|+|+||.|++++|||||+|+||+++|++.....++..+.     + .+|+.+
T Consensus       156 -----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~  224 (248)
T d2o23a1         156 -----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGD  224 (248)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcC
Confidence                       46788999999999999999999999999999999999999999876544332222     2 378899


Q ss_pred             HHHHHHHHHHHhccCCCCCCCcce
Q 019551          279 SEEGADTVLWLALQPKEKLVSGSF  302 (339)
Q Consensus       279 ~~e~A~~v~~l~s~~~~~~~~G~~  302 (339)
                      |||+|++++||+++   .+++|+.
T Consensus       225 peevA~~v~fL~s~---~~itGq~  245 (248)
T d2o23a1         225 PAEYAHLVQAIIEN---PFLNGEV  245 (248)
T ss_dssp             HHHHHHHHHHHHHC---TTCCSCE
T ss_pred             HHHHHHHHHHHHhC---CCCCceE
Confidence            99999999999973   4566654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.5e-41  Score=298.97  Aligned_cols=226  Identities=23%  Similarity=0.319  Sum_probs=184.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHH---HCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc--
Q 019551           62 KNCVVTGANAGIGYATAEGLA---SRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL--  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~---~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--  136 (339)
                      |+||||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+..  .++.++.||++|+++++++++++..  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNH--SNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHC--TTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcC--CcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            799999999999999999996   579999999999998877653 44442  4799999999999999999998854  


Q ss_pred             CCCCccEEEEccccccCCC---CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC----------CCCEEEEEcCccccc
Q 019551          137 KNKPVHVLVNNAGVLENNR---LITSEGFELNFAVNVLGTYTITESMVPLLEKAA----------PDARVITVSSGGMYT  203 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~----------~~~~Iv~vsS~~~~~  203 (339)
                      .++++|+||||||+.....   ..+.++|++++++|+.|++.++++++|+|+++.          ..+++|+++|..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            6789999999999876543   367889999999999999999999999998641          368999999988764


Q ss_pred             cccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHH
Q 019551          204 AHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGA  283 (339)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A  283 (339)
                      ..         .+.+++.+|++||+|+.+|+++++.|++++||+||+|+||+|+|++.....+          .++++.+
T Consensus       160 ~~---------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~----------~~~~~~~  220 (248)
T d1snya_         160 QG---------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP----------LDVPTST  220 (248)
T ss_dssp             TT---------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS----------BCHHHHH
T ss_pred             CC---------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC----------CCchHHH
Confidence            21         3456788999999999999999999999999999999999999999875533          2344455


Q ss_pred             HHHHHHhccCCCCCCCcceee-CCCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYF-DRAEAP  310 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~-d~~~~~  310 (339)
                      +.++.++..... ..+|+|+. ||++++
T Consensus       221 ~~i~~~i~~l~~-~~tG~~i~~dG~~ip  247 (248)
T d1snya_         221 GQIVQTISKLGE-KQNGGFVNYDGTPLA  247 (248)
T ss_dssp             HHHHHHHHHCCG-GGTTCEECTTSCBCC
T ss_pred             HHHHHHHHhcCc-cCCCcEEEECCeEcC
Confidence            555555443222 24688874 888765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-41  Score=299.41  Aligned_cols=228  Identities=23%  Similarity=0.267  Sum_probs=176.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +.. +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIK-DSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCC-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hhh-CCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            469999999999999999999999996  6999999998876543    222 457999999999999999999999886


Q ss_pred             CC--CccEEEEccccccCC---CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhC----------CCCEEEEEcCcccc
Q 019551          138 NK--PVHVLVNNAGVLENN---RLITSEGFELNFAVNVLGTYTITESMVPLLEKAA----------PDARVITVSSGGMY  202 (339)
Q Consensus       138 ~~--~id~lInnAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~----------~~~~Iv~vsS~~~~  202 (339)
                      ++  ++|+||||||+..+.   ...+.++|++.+++|+.|++++++.++|+|+++.          ..+++++++|....
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence            65  499999999987542   2367889999999999999999999999998652          23788998887655


Q ss_pred             ccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHH
Q 019551          203 TAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEG  282 (339)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~  282 (339)
                      .....     ...+..+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.....          ..+|||.
T Consensus       157 ~~~~~-----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~----------~~~~e~~  221 (250)
T d1yo6a1         157 ITDNT-----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA----------ALTVEQS  221 (250)
T ss_dssp             STTCC-----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------HHH
T ss_pred             ccCCc-----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC----------CCCHHHH
Confidence            32110     01233456789999999999999999999999999999999999999865331          2589999


Q ss_pred             HHHHHHHhccCCCCCCCcceee-CCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYF-DRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~-d~~~  308 (339)
                      ++.++..+..+.. ..+|+||. ||.+
T Consensus       222 a~~~~~~~~~~~~-~~sG~f~~~~g~p  247 (250)
T d1yo6a1         222 TAELISSFNKLDN-SHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHTTCCG-GGTTCEEETTEEE
T ss_pred             HHHHHHHHhcCCC-CCCeEEECCCCee
Confidence            9999999875443 46788887 5543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-41  Score=298.22  Aligned_cols=215  Identities=20%  Similarity=0.200  Sum_probs=189.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      |+||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+..+ ..+..+.+|+++.+.+....+.+...+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc-ccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999988876654 578889999999999999999999999


Q ss_pred             CCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          139 KPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      +.+|++|||||.......  .+.++|++++++|+.|++.+++.++|+|+++  +|+||++||.++.            .+
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~------------~~  156 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGK------------VA  156 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGT------------SC
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhc------------CC
Confidence            999999999998776554  5889999999999999999999999999765  6999999999887            45


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcC--CCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKE--KGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      .++..+|++||+|+++|+++|+.|+++  .||+||+|+||+|+|++.....+...   .....+||++|+.++....
T Consensus       157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~---~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV---HMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG---GGGCBCHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc---cccCCCHHHHHHHHHHHhh
Confidence            788999999999999999999999974  57999999999999997654332211   2234689999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.9e-40  Score=290.89  Aligned_cols=232  Identities=15%  Similarity=0.196  Sum_probs=192.8

Q ss_pred             cCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+ +++....+  ....+.+|+++..++...++++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLG--SDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcC--CcceeecccchHHHHHHHHHHhhh
Confidence            7899999999998  899999999999999999999996654444 45544433  456778899999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC-------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc
Q 019551          137 KNKPVHVLVNNAGVLENNRL-------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~-------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      .++++|++||||+.......       ...+.+...+++|+.+.+.+++.+.|.|.+   ++.||++||.++.       
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~-------  149 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE-------  149 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT-------
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhc-------
Confidence            99999999999988654331       355778889999999999999999998753   4779999998776       


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--H-----HHHHhccCCCHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--F-----NERFAGNLRTSEEG  282 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~-----~~~~~~~~~~~~e~  282 (339)
                           .+.+....|++||+|+++|+|++|.|++++|||||+|+||+|+|++.......  .     ...+.+|+.+|||+
T Consensus       150 -----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peei  224 (258)
T d1qsga_         150 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV  224 (258)
T ss_dssp             -----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             -----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHH
Confidence                 34677889999999999999999999999999999999999999987654221  1     12246789999999


Q ss_pred             HHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          283 ADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       283 A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |+.++||+++.....++..+.+|||-
T Consensus       225 a~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         225 GNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCceEEECcCH
Confidence            99999999865555555556779994

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1e-39  Score=292.66  Aligned_cols=232  Identities=17%  Similarity=0.176  Sum_probs=182.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCccEE-----------------EEeccCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRS-KEKGETALSAIRSKTGNENVH-----------------LELCDLSS  123 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~-~~~~~~~~~~l~~~~~~~~~~-----------------~~~~Dl~~  123 (339)
                      .++|||||++|||+++|++|+++|++|++++|+ .++++++.+++.+..+. ...                 ...+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            479999999999999999999999999998765 55667777787766543 233                 34567999


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEccccccCCCC--CChhh--------------hhhhhhhhhhHHHHHHHHHHHHHHh-
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNAGVLENNRL--ITSEG--------------FELNFAVNVLGTYTITESMVPLLEK-  186 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~--~~~~~--------------~~~~~~vN~~~~~~l~~~~l~~m~~-  186 (339)
                      .++++++++++.+++|++|+||||||+..+...  .+.++              +...+++|+.++++++|.+.+.+.. 
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999998876543  23333              3357899999999999999987642 


Q ss_pred             ----hCCCCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc
Q 019551          187 ----AAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA  262 (339)
Q Consensus       187 ----~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  262 (339)
                          +...++|++++|....            .+.++..+|++||+|+++|+|++|.|++++|||||+|+||++.+..  
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--  227 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTN------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--  227 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTT------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--
T ss_pred             HHHhcCCCCccccccccccc------------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--
Confidence                2346789999888776            3567889999999999999999999999999999999999866532  


Q ss_pred             CcchhHHHH-----H-hccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          263 KSMPSFNER-----F-AGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       263 ~~~~~~~~~-----~-~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ...++..+.     + .+|+.+|+|+|++++||+++...+.++..+.+|||-
T Consensus       228 ~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~  279 (284)
T d1e7wa_         228 DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  279 (284)
T ss_dssp             GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence            222222222     2 378899999999999999966555555567789984

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=7.1e-40  Score=292.34  Aligned_cols=259  Identities=14%  Similarity=0.105  Sum_probs=188.7

Q ss_pred             cCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |+||++|||||+|  |||+++|++|+++|++|++++|++ ++++..+++.+..+  ...+..+|+++.++++++++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCC--ceeEeeecccchhhHHHHHHHHHH
Confidence            7899999999765  999999999999999999999995 45556666666543  566789999999999999999999


Q ss_pred             CCCCccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcccccc
Q 019551          137 KNKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFN  213 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~  213 (339)
                      .++++|++|||+|.......   ...+.+.....++...++...+.....++..+.++.|+++|+.+..           
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----------  148 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST-----------  148 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccc-----------
Confidence            99999999999998754332   2222222223333333332323222233333234556666665554           


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-------HHHHHhccCCCHHHHHHHH
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-------FNERFAGNLRTSEEGADTV  286 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~e~A~~v  286 (339)
                       .+.+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......       ....+.+++.+|+|+|+.+
T Consensus       149 -~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v  227 (274)
T d2pd4a1         149 -KYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAG  227 (274)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             -cccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHH
Confidence             24566788999999999999999999999999999999999999987654321       1122457899999999999


Q ss_pred             HHHhccCCCCCCCcceeeCCCCCCcccccccccCCHHHHHHHHHHHHh
Q 019551          287 LWLALQPKEKLVSGSFYFDRAEAPKHLKFAATAASHARIDPIVDVLRS  334 (339)
Q Consensus       287 ~~l~s~~~~~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  334 (339)
                      +||+|+.....++..+.+|||..-  -.+......+..++.||+.+++
T Consensus       228 ~fL~S~~s~~itG~~i~vDGG~~~--~g~~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         228 MYLLSSLSSGVSGEVHFVDAGYHV--MGMGAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG--BSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HHHhChhhCCCcCceEEECCChhh--ccCCcccccccchhhhhhhhcc
Confidence            999996555555556778999621  1233444566677899998753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.8e-40  Score=300.26  Aligned_cols=234  Identities=12%  Similarity=0.112  Sum_probs=183.9

Q ss_pred             CCCEEEEEc--CCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCc----------cEEEEe---------
Q 019551           60 EGKNCVVTG--ANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNE----------NVHLEL---------  118 (339)
Q Consensus        60 ~~k~vlITG--as~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~----------~~~~~~---------  118 (339)
                      .+|++||||  +++|||+++|++|+++|++|++++++............+.....          ......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  56899999999999999999999998776554444333222110          112222         


Q ss_pred             -----------ccCCCHHHHHHHHHHHhcCCCCccEEEEccccccCC----CCCChhhhhhhhhhhhhHHHHHHHHHHHH
Q 019551          119 -----------CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENN----RLITSEGFELNFAVNVLGTYTITESMVPL  183 (339)
Q Consensus       119 -----------~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~  183 (339)
                                 +|+++.++++++++.+.+.+|+||+||||||.....    ..++.++|++.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       367788899999999999999999999999986542    23688999999999999999999999999


Q ss_pred             HHhhCCCCEEEEEcCccccccccCccccccCCCCcc-hHHHHHhHHHHHHHHHHHHHHHcC-CCeEEEEeeCCcccCCCc
Q 019551          184 LEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG-MEQYARNKRVQVALTEKWSEMYKE-KGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       184 m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sKaa~~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~  261 (339)
                      |++   +|+||++||.++..            +.|+ ...|++||+|+++|+|+||.||++ +|||||+|+||+|+|+..
T Consensus       161 m~~---~GsIv~iss~~~~~------------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~  225 (329)
T d1uh5a_         161 MKP---QSSIISLTYHASQK------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             EEE---EEEEEEEECGGGTS------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTG
T ss_pred             ccc---ccccccceeehhcc------------cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhh
Confidence            964   58999999988763            3454 457999999999999999999986 699999999999999432


Q ss_pred             cC---------------------------------------------cchhHH-----HHHhccCCCHHHHHHHHHHHhc
Q 019551          262 AK---------------------------------------------SMPSFN-----ERFAGNLRTSEEGADTVLWLAL  291 (339)
Q Consensus       262 ~~---------------------------------------------~~~~~~-----~~~~~~~~~~~e~A~~v~~l~s  291 (339)
                      ..                                             ..+...     ..|++|+.+|+|+|++++||+|
T Consensus       226 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaS  305 (329)
T d1uh5a_         226 TAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLS  305 (329)
T ss_dssp             GGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHS
T ss_pred             hcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence            11                                             000111     1146889999999999999999


Q ss_pred             cCCCCCCCcceeeCCCC
Q 019551          292 QPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       292 ~~~~~~~~G~~~~d~~~  308 (339)
                      +...+.++..+.+|||.
T Consensus       306 d~s~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         306 RESRAITGQTIYVDNGL  322 (329)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhCCccCCeEEECCCc
Confidence            76666666666789995

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-38  Score=278.17  Aligned_cols=219  Identities=23%  Similarity=0.248  Sum_probs=180.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|++|||||++|||+++|++|+++|++|++++|+++.              .+.....+|+++......+......... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhcccc-
Confidence            5899999999999999999999999999999998752              3566788999999999998887766654 


Q ss_pred             ccEEEEccccccCC------CCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEEcCccccccccCcc
Q 019551          141 VHVLVNNAGVLENN------RLITSEGFELNFAVNVLGTYTITESMVPLLEKA-----APDARVITVSSGGMYTAHLTDD  209 (339)
Q Consensus       141 id~lInnAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~~~~Iv~vsS~~~~~~~~~~~  209 (339)
                      .+.++++++.....      ...+.+.|++.+++|+.+++.+++.+.+.+...     .+.|+||++||..+..      
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------  139 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------  139 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc------
Confidence            45566666654322      124678899999999999999999999986432     2569999999998873      


Q ss_pred             ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHH------hccCCCHHHHH
Q 019551          210 LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERF------AGNLRTSEEGA  283 (339)
Q Consensus       210 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~~e~A  283 (339)
                            +.++..+|++||+|+++|+|+||.|++++|||||+|+||+|+|++.....+...+..      .+|+.+|||+|
T Consensus       140 ------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA  213 (241)
T d1uaya_         140 ------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYA  213 (241)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHH
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHH
Confidence                  467889999999999999999999999999999999999999998876655443332      36789999999


Q ss_pred             HHHHHHhccCCCCCCCcceeeCCCC
Q 019551          284 DTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      ++++||+++  .+.++..+.+|||-
T Consensus       214 ~~v~fL~s~--~~iTG~~i~VDGG~  236 (241)
T d1uaya_         214 ALVLHILEN--PMLNGEVVRLDGAL  236 (241)
T ss_dssp             HHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HHHHHHHhC--CCCCCCEEEECCcc
Confidence            999999983  34445555679984

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.9e-39  Score=289.11  Aligned_cols=240  Identities=14%  Similarity=0.103  Sum_probs=182.8

Q ss_pred             cccccCCCEEEEEcCCC--chHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC---------cc-EEEEecc--
Q 019551           55 MQARIEGKNCVVTGANA--GIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN---------EN-VHLELCD--  120 (339)
Q Consensus        55 ~~~~l~~k~vlITGas~--gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~---------~~-~~~~~~D--  120 (339)
                      |+.+|+||++|||||++  |||+++|++|+++|++|++++|++................         .. -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            45679999999999875  9999999999999999999999865443333222111100         00 1122222  


Q ss_pred             ------------------CCCHHHHHHHHHHHhcCCCCccEEEEccccccC--C--CCCChhhhhhhhhhhhhHHHHHHH
Q 019551          121 ------------------LSSITEIKSFANRFSLKNKPVHVLVNNAGVLEN--N--RLITSEGFELNFAVNVLGTYTITE  178 (339)
Q Consensus       121 ------------------l~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~--~--~~~~~~~~~~~~~vN~~~~~~l~~  178 (339)
                                        .++..+++++++++.+++|++|+||||||....  .  ...+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              355667788999999999999999999998542  2  236889999999999999999999


Q ss_pred             HHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHc-CCCeEEEEeeCCccc
Q 019551          179 SMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYK-EKGIGFYSMHPGWAE  257 (339)
Q Consensus       179 ~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~v~~v~PG~v~  257 (339)
                      +++|.|.++   ++++++++.+...           ...+....|+++|+++.++++.++.|++ ++|||||+|+||+++
T Consensus       162 ~~~~~~~~~---g~~~~~~~~~~~~-----------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~  227 (297)
T d1d7oa_         162 HFLPIMNPG---GASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             HHGGGEEEE---EEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHHHhhcC---Ccceeeeehhhcc-----------cccccccceecccccccccccccchhccccceEEeccccccccc
Confidence            999887644   5666666655442           1345667899999999999999999997 579999999999999


Q ss_pred             CCCccCcch--hHHH-----HHhccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          258 TPGVAKSMP--SFNE-----RFAGNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       258 T~~~~~~~~--~~~~-----~~~~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      |++......  +..+     .|++|+.+|||+|++++||+|+...+.++..+.+|||.
T Consensus       228 T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         228 SRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             chhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            998875421  2111     24578999999999999999966665566667789995

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.8e-39  Score=279.33  Aligned_cols=212  Identities=15%  Similarity=0.098  Sum_probs=175.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC--
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK--  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--  137 (339)
                      +||++|||||++|||+++|++|+++|++|+++++++.+.            ........+|.++.++++.+...+.+.  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999876531            234556778888888888887777654  


Q ss_pred             CCCccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          138 NKPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      .+++|+||||||.......   .+.++|++++++|+.+++.++++++|+|++   +|+||++||.++.            
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~------------  133 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAAL------------  133 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG------------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHc------------
Confidence            4579999999997554332   456889999999999999999999999964   5999999999887            


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhcc
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~  292 (339)
                      .+.+++.+|++||+|+++|+|+||.|++  ++||+||+|+||+++||+.+...++.   ...++..|+++|+.+++|+++
T Consensus       134 ~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~pe~va~~~~~l~s~  210 (236)
T d1dhra_         134 DGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA---DFSSWTPLEFLVETFHDWITG  210 (236)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS---CGGGSEEHHHHHHHHHHHHTT
T ss_pred             CCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc---hhhcCCCHHHHHHHHHHHhCC
Confidence            4578889999999999999999999998  57999999999999999865443321   234577899999999999986


Q ss_pred             CCCCCCCcce
Q 019551          293 PKEKLVSGSF  302 (339)
Q Consensus       293 ~~~~~~~G~~  302 (339)
                      .... ++|.+
T Consensus       211 ~~~~-i~G~~  219 (236)
T d1dhra_         211 NKRP-NSGSL  219 (236)
T ss_dssp             TTCC-CTTCE
T ss_pred             CccC-CCCCe
Confidence            5544 55543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.9e-37  Score=273.89  Aligned_cols=232  Identities=17%  Similarity=0.154  Sum_probs=181.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCccEEEEeccCC----CHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-GETALSAIRSKTGNENVHLELCDLS----SITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~~  136 (339)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+..+. +.....+|..    ..+.++++++.+.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC-ceEEEecccccchhHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998765 46677777776553 5555555444    45677788888888


Q ss_pred             CCCCccEEEEccccccCCCC-------------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhh----CCCCEEEEEcCc
Q 019551          137 KNKPVHVLVNNAGVLENNRL-------------ITSEGFELNFAVNVLGTYTITESMVPLLEKA----APDARVITVSSG  199 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~-------------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~----~~~~~Iv~vsS~  199 (339)
                      ++|++|+||||||+..+...             ...+.+...+.+|+.+++...+...+.+...    ...+.+++++|.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            99999999999998765432             1234566778899999999988887776532    135678888887


Q ss_pred             cccccccCccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHH-----Hh-
Q 019551          200 GMYTAHLTDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNER-----FA-  273 (339)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~-  273 (339)
                      .+.            .+.+++..|++||+|+++|+|++|.|++++|||||+|+||+++|++....  +..+.     ++ 
T Consensus       161 ~~~------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~--~~~~~~~~~~pl~  226 (266)
T d1mxha_         161 MTD------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ--ETQEEYRRKVPLG  226 (266)
T ss_dssp             GGG------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH--HHHHHHHTTCTTT
T ss_pred             ccc------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH--HHHHHHHhcCCCC
Confidence            776            45788999999999999999999999999999999999999999865432  22222     23 


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          274 GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       274 ~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +++.+|||+|++++||+++.....++..+.+|||-
T Consensus       227 r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         227 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            34579999999999999965555555567889984

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.3e-38  Score=272.36  Aligned_cols=213  Identities=15%  Similarity=0.097  Sum_probs=174.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc--CC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL--KN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~  138 (339)
                      +++||||||++|||+++|++|+++|++|++++|++++.            ......+.+|+.+.++.....+.+..  .+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999987531            12445667888888887777766655  57


Q ss_pred             CCccEEEEccccccCCCC---CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          139 KPVHVLVNNAGVLENNRL---ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~---~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                      ++||+||||||+......   .+.+.|+.++++|+.+++.++|+++|+|++   +|+||++||.++.            .
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~------------~  134 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAM------------G  134 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG------------S
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhc------------C
Confidence            899999999997654332   345789999999999999999999999964   4899999999887            4


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHc--CCCeEEEEeeCCcccCCCccCcchhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYK--EKGIGFYSMHPGWAETPGVAKSMPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                      +.+++.+|++||+|+++|+++|+.|++  +.||+||+|+||+++|++.+...++.   ...++.+|+++|+.+++++.++
T Consensus       135 ~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~---~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         135 PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA---DHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC---CGGGCBCHHHHHHHHHHHHHCG
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC---ccccCCCHHHHHHHHHHHhcCc
Confidence            578899999999999999999999998  57999999999999999865544321   1345678999999998766666


Q ss_pred             CCCCCCccee
Q 019551          294 KEKLVSGSFY  303 (339)
Q Consensus       294 ~~~~~~G~~~  303 (339)
                      .....+|.++
T Consensus       212 ~~~~~tG~~i  221 (235)
T d1ooea_         212 SSRPSSGALL  221 (235)
T ss_dssp             GGCCCTTCEE
T ss_pred             cccCCCceEE
Confidence            6666777664

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.9e-37  Score=271.89  Aligned_cols=230  Identities=13%  Similarity=0.142  Sum_probs=178.5

Q ss_pred             cCCCEEEEEcC--CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGA--NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGa--s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+   ++.+.. +.+...+.||++++++++++++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence            78999999994  5799999999999999999999999876543   333333 34677889999999999999888865


Q ss_pred             ---CCCCccEEEEccccccCCC-------CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccccc
Q 019551          137 ---KNKPVHVLVNNAGVLENNR-------LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL  206 (339)
Q Consensus       137 ---~~~~id~lInnAG~~~~~~-------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~  206 (339)
                         .++.+|++|||||+.....       ..+.+++.+.+++|+.+.+...+...+.+.   +.+ +++++|....    
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~i~~~s~~~~----  151 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGG-SIVGMDFDPS----  151 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEE-EEEEEECCCS----
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---ccc-cccccccccc----
Confidence               4678999999999764221       246788899999999999998888766542   223 4444444433    


Q ss_pred             CccccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----h-------hHHH----
Q 019551          207 TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----P-------SFNE----  270 (339)
Q Consensus       207 ~~~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~-------~~~~----  270 (339)
                              .+.|++..|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.....     .       ...+    
T Consensus       152 --------~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (268)
T d2h7ma1         152 --------RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ  223 (268)
T ss_dssp             --------SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH
T ss_pred             --------ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHh
Confidence                    346788899999999999999999999999999999999999998753211     0       0111    


Q ss_pred             -HHh-ccCCCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          271 -RFA-GNLRTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       271 -~~~-~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                       .++ +++.+|+|+|++++||+|+.....++..+.+|||.
T Consensus       224 ~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         224 RAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence             122 34889999999999999865555555557889996

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.7e-34  Score=253.39  Aligned_cols=222  Identities=21%  Similarity=0.257  Sum_probs=162.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc-CCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL-KNKP  140 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~  140 (339)
                      |+||||||++|||+++|++|+++|++|++++|++++                   ..+|+.+.+..+....+... ..+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999999997642                   24699999988877666554 4568


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc-cc---------
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD-DL---------  210 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~-~~---------  210 (339)
                      +|++|||||+..     ..+.+....++|..+...+.+...+.+.+. ....+.++++.......... ..         
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            999999999764     335578889999999999999999988776 44566666554322110000 00         


Q ss_pred             ------cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh--HHH------HHhccC
Q 019551          211 ------EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS--FNE------RFAGNL  276 (339)
Q Consensus       211 ------~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~------~~~~~~  276 (339)
                            .......++..+|++||+|+++|+|++|.|++++|||||+|+||+++||+.......  ..+      .+.+|+
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                  000123345678999999999999999999999999999999999999987654321  111      256889


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      .+|+|+|+.++||+|+.....++..+.+|||-
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            99999999999999976665566667789994

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=6.2e-31  Score=232.13  Aligned_cols=210  Identities=18%  Similarity=0.230  Sum_probs=162.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK---EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.++++++++.+.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            57999999999999999999999999 699999974   4455666666544  45899999999999999999998765


Q ss_pred             CCCCccEEEEccccccCCCC--CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccC
Q 019551          137 KNKPVHVLVNNAGVLENNRL--ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNS  214 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~  214 (339)
                      . +++|.+|||+|.......  .+.++|+.++++|+.+++++.+.+    ... +.++||++||.++..           
T Consensus        87 ~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-~~~~iv~~SS~a~~~-----------  149 (259)
T d2fr1a1          87 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----REL-DLTAFVLFSSFASAF-----------  149 (259)
T ss_dssp             T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-CCSEEEEEEEHHHHT-----------
T ss_pred             c-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hcc-CCceEeeecchhhcc-----------
Confidence            4 589999999999887654  688999999999999999887753    333 578999999999873           


Q ss_pred             CCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc-chhHHHHHhccCCCHHHHHHHHHHHhccC
Q 019551          215 GSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS-MPSFNERFAGNLRTSEEGADTVLWLALQP  293 (339)
Q Consensus       215 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~e~A~~v~~l~s~~  293 (339)
                       +.++...|+++|+++++|++.++    ..||+|++|+||.+.++++... ..+..+...-...+|+++++.+..++..+
T Consensus       150 -g~~~~~~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         150 -GAPGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             -CCTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             -CCcccHHHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence             56788999999999988776554    4699999999999876544322 11110001113468999999999988654


Q ss_pred             C
Q 019551          294 K  294 (339)
Q Consensus       294 ~  294 (339)
                      .
T Consensus       225 ~  225 (259)
T d2fr1a1         225 E  225 (259)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=9e-20  Score=167.26  Aligned_cols=227  Identities=17%  Similarity=0.150  Sum_probs=156.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |+||||||||.||.+++++|.++|++|++++|...     +++....+...  ...++.++.+|++|.++++++++..  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            89999999999999999999999999999999643     22222222111  2347899999999999999999875  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         .+|+++|+|+......  +.++.+..+++|+.|+..+++++...-.  .+..++|++||...++.+...+ ..+..+
T Consensus        78 ---~~d~v~h~aa~~~~~~--~~~~~~~~~~~Nv~gt~nllea~~~~~~--~~~~r~i~~SS~~vYG~~~~~~-~~E~~~  149 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV--SFESPEYTADVDAMGTLRLLEAIRFLGL--EKKTRFYQASTSELYGLVQEIP-QKETTP  149 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT--TTSCHHHHHHHHTHHHHHHHHHHHHTTC--TTTCEEEEEEEGGGGTTCCSSS-BCTTSC
T ss_pred             ---CCCEEEEeecccccch--hhhCHHHHHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEEchhhhCCCCCCC-cCCCCC
Confidence               6899999999876433  3455677899999999999988744311  1346899999987764321111 111223


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHHHHH----h--------------ccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFNERF----A--------------GNL  276 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~~----~--------------~~~  276 (339)
                      ..+...|+.||.+.+.+++.++..+   |+.+..+.|+.+..|.......  .....+    .              ..+
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~  226 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecc
Confidence            3446789999999999999988765   6899999999999885432211  111110    0              124


Q ss_pred             CCHHHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          277 RTSEEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      ...+|++++++.++..+    .++.|.+..+
T Consensus       227 ~~v~D~~~a~~~~~~~~----~~~~yni~sg  253 (357)
T d1db3a_         227 GHAKDYVKMQWMMLQQE----QPEDFVIATG  253 (357)
T ss_dssp             EEHHHHHHHHHHTTSSS----SCCCEEECCC
T ss_pred             eeechHHHHHHHHHhCC----CCCeEEECCC
Confidence            56899999999887532    2466666433

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=3.4e-22  Score=167.46  Aligned_cols=155  Identities=15%  Similarity=0.185  Sum_probs=116.3

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .+++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+..   ++.+..+|+++.+++++++     
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh-----
Confidence            46899999999999999999999999999999999999999999988887653   3556789999999988765     


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                        +++|+||||||+..  ...+.+.|+..+++|+.+.+.....+.+.+...  ......+++......           .
T Consensus        91 --~~iDilin~Ag~g~--~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~-----------~  153 (191)
T d1luaa1          91 --KGAHFVFTAGAIGL--ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA--TDKGKEYGGKRAFGA-----------L  153 (191)
T ss_dssp             --TTCSEEEECCCTTC--CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT--TCEEEEETTEEEECH-----------H
T ss_pred             --cCcCeeeecCcccc--ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh--ccCcEEecceEEEec-----------c
Confidence              47999999999743  346889999999999988877665543333222  122223333222211           0


Q ss_pred             CcchHHHHHhHHHHHHHHHH
Q 019551          217 FDGMEQYARNKRVQVALTEK  236 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~  236 (339)
                      ..+...|+.+|+++..++++
T Consensus       154 ~~g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         154 GIGGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHTSC
T ss_pred             CcCcHHHHHHHHHHHHHHhc
Confidence            12345799999999887653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=1.4e-17  Score=151.46  Aligned_cols=225  Identities=14%  Similarity=0.050  Sum_probs=153.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .||+||||||+|.||.+++++|.++|++|+++.|+.++...................+..|+.|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4899999999999999999999999999999999987766555443333334445667789999987766543       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccC-ccc--------
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLT-DDL--------  210 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~-~~~--------  210 (339)
                      ..|.++|+|+.....     ......+.+|+.|+..+++.+..    .....++|++||..+...... ...        
T Consensus        83 ~~~~v~~~a~~~~~~-----~~~~~~~~~nv~gt~~ll~~~~~----~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~  153 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAA----TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHT----CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred             cchhhhhhccccccc-----ccccccccchhhhHHHHHHhhhc----ccccccccccccceeeccCCCCCCCcccccccc
Confidence            689999999875422     22445678899999888887533    224578999999765432111 000        


Q ss_pred             ----------cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-----hhHHHHHh--
Q 019551          211 ----------EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-----PSFNERFA--  273 (339)
Q Consensus       211 ----------~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~~--  273 (339)
                                .....+..+...|+.||.+.+.+++.++.... .++++..++|+.+..|......     ........  
T Consensus       154 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g  232 (342)
T d1y1pa1         154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG  232 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTT
T ss_pred             ccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHHHcC
Confidence                      01112334567899999999999999888764 5788899999988776432211     11111111  


Q ss_pred             -----------ccCCCHHHHHHHHHHHhccCCCCCCCcceee
Q 019551          274 -----------GNLRTSEEGADTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       274 -----------~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~  304 (339)
                                 ..+..++|+|+..+.++..+.   .+|.+++
T Consensus       233 ~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~---~~g~~~~  271 (342)
T d1y1pa1         233 EVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ---IERRRVY  271 (342)
T ss_dssp             CCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT---CCSCEEE
T ss_pred             CcCcccCCccceeeeeHHHHHHHHHHhhcCcc---ccceEEE
Confidence                       124568999999887775432   2454544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=3e-17  Score=147.50  Aligned_cols=225  Identities=15%  Similarity=0.102  Sum_probs=154.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+||||||||.||++++++|.++|++|+.++|......  ...+.......++.++.+|++|.+++.+.+...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998754211  112222222357899999999999999888875     67


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      ++++|+|+......  ..+.....+.+|+.|+..+++++...    +...++++.||...+... ......+..+..+..
T Consensus        74 ~~~~~~a~~~~~~~--~~~~~~~~~~~n~~g~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~-~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          74 QEVYNLAAQSFVGA--SWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLI-QAERQDENTPFYPRS  146 (321)
T ss_dssp             SEEEECCSCCCHHH--HTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSC-SSSSBCTTSCCCCCS
T ss_pred             cccccccccccccc--cccchHHHHhhhhhchHHHHHHHHHh----CCCcccccccchhhcCcc-cCCCCCCCCCccccC
Confidence            78888886543221  22445677899999999988876443    234567777776554322 222222234445567


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-----hHHHH-Hh--------------ccCCCHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-----SFNER-FA--------------GNLRTSEE  281 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~-~~--------------~~~~~~~e  281 (339)
                      .|+.+|.+.+.+.+.++.++   ++.+..+.|+.+..|.......     ..... ..              +.+...+|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            89999999999999888775   6889999998888875432211     11111 10              12457899


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|+.++.++..+.    ++.|.+.++
T Consensus       224 ~~~~~~~~~~~~~----~~~~ni~~~  245 (321)
T d1rpna_         224 YVEAMWLMLQQDK----ADDYVVATG  245 (321)
T ss_dssp             HHHHHHHHHHSSS----CCCEEECCS
T ss_pred             HHHHHHHHHhcCC----cCCceeccc
Confidence            9999999986543    344555444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.5e-17  Score=151.03  Aligned_cols=183  Identities=14%  Similarity=0.084  Sum_probs=133.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|.||..+++.|+++|++|++++|............... ...++.++.+|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            4999999999999999999999999999987332211112222111 1347889999999999999988864     699


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+|+....  ..+.++.+..+++|+.|+..+++++...     +-.++|++||.+.+................+...
T Consensus        76 ~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          76 TVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             EEEECCCccch--hhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEccccccccccccccCCCcch
Confidence            99999985431  1233456688999999999999887544     4568999999887754322222112223345678


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      |+.+|.+.+.+.+....+.  .++.+..++|+.+.++.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred             HHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence            9999999999998777664  47888889998888753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.74  E-value=1.7e-17  Score=152.16  Aligned_cols=228  Identities=14%  Similarity=0.171  Sum_probs=158.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEE-EEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVY-MVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vv-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +||||||+|.||.+++++|++.|++|+ ++++......  .+.+.......++.++.+|++|.+.+..+++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            589999999999999999999999754 4554321110  112222333457999999999999999988865     69


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhh----CCCCEEEEEcCccccccccCccc-------
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKA----APDARVITVSSGGMYTAHLTDDL-------  210 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~----~~~~~Iv~vsS~~~~~~~~~~~~-------  210 (339)
                      |+|||+|+....  ..+.++....+++|+.|+..+++.+...-...    ....++|++||.+.+......+.       
T Consensus        75 d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (361)
T d1kewa_          75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence            999999986432  12334566789999999999999987764321    12468999999887754322111       


Q ss_pred             --cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccC--cchhHHHHHh-------------
Q 019551          211 --EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAK--SMPSFNERFA-------------  273 (339)
Q Consensus       211 --~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~--~~~~~~~~~~-------------  273 (339)
                        .....+..+...|+.||.+.+.+++.++..+   |+.+..++|+.|..|....  ..+.......             
T Consensus       153 ~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~  229 (361)
T d1kewa_         153 PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ  229 (361)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCC
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCe
Confidence              0111233445679999999999999998765   7999999999999885432  1233222211             


Q ss_pred             -ccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          274 -GNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       274 -~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                       +.+...+|+|++++.++....   .++.|.+.
T Consensus       230 ~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~  259 (361)
T d1kewa_         230 IRDWLYVEDHARALHMVVTEGK---AGETYNIG  259 (361)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC---TTCEEEEC
T ss_pred             EEeCEEHHHHHHHHHHHHhcCC---CCCeEEEC
Confidence             124579999999999986433   24555553

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.5e-17  Score=147.97  Aligned_cols=218  Identities=14%  Similarity=0.101  Sum_probs=148.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK-----GETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |+||||||+|.||.+++++|.++|++|+.++|..+.     ++........ ....++.++.+|++|.+.+..+++..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCchhhHHHHhhc--
Confidence            455999999999999999999999999999996431     1211111111 11246899999999999999998875  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         .+++++|+|+.....  ...+.....+++|+.|+..+++++...-..  +..++|++||.+.++..... ...+..+
T Consensus        79 ---~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS~~vyg~~~~~-~~~E~~~  150 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEI-PQKETTP  150 (347)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSS-SBCTTSC
T ss_pred             ---ccceeeeeeeccccc--hhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecchheecCCCCC-CCCCCCC
Confidence               688999998764321  233445566899999999998877543211  24589999998876532111 1112233


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch--hHH----HHH--------------hccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP--SFN----ERF--------------AGNL  276 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~----~~~--------------~~~~  276 (339)
                      ..+...|+.||.+.+.+++.++..+   ++.+..++|+.+..|.......  ...    ...              .+.+
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~  227 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  227 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee
Confidence            4456789999999999999887764   7888899998888874322211  111    110              0124


Q ss_pred             CCHHHHHHHHHHHhccC
Q 019551          277 RTSEEGADTVLWLALQP  293 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~  293 (339)
                      ...+|+++++..++...
T Consensus       228 i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         228 GHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EEHHHHHHHHHHHHHSS
T ss_pred             eEecHHHHHHHHHhhcC
Confidence            57899999999988643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=1.3e-16  Score=144.34  Aligned_cols=219  Identities=14%  Similarity=0.119  Sum_probs=152.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE-----KGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      |++|||||||.||.++++.|+++|++|+.++|..+     +.......... .....+.++.+|+++.+++...++..  
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh--
Confidence            89999999999999999999999999999998532     22211111111 11346889999999999999988764  


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         ++|++||+|+.....  ...+.....+.+|+.++..++.++.....+.....++++.||...+....  ....+..+
T Consensus        79 ---~~D~Vih~Aa~~~~~--~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~--~~~~E~~~  151 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP--PPQSETTP  151 (339)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC--SSBCTTSC
T ss_pred             ---ccchhhhcccccccc--ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC--CCCCCCCC
Confidence               799999999875422  13345567789999999999998876665553455666666655443211  11112234


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc-h-hHH----HHHh--------------ccC
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM-P-SFN----ERFA--------------GNL  276 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~-~~~----~~~~--------------~~~  276 (339)
                      ..+...|+.+|.+.+.+++.++..+   |+.+..++|+.|..|...... . ...    ....              ..+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            4557789999999999998888764   799999999999887543321 1 111    1110              124


Q ss_pred             CCHHHHHHHHHHHhccC
Q 019551          277 RTSEEGADTVLWLALQP  293 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s~~  293 (339)
                      ...+|+|+.+..++..+
T Consensus       229 ~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EEHHHHHHHHHHHHTSS
T ss_pred             eeeehHHHHHHHHHhcC
Confidence            55899999999988654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.9e-17  Score=136.16  Aligned_cols=191  Identities=12%  Similarity=0.132  Sum_probs=129.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ..|+++||||||+||++++++|+++|++|+++.|+++++...        ....+.++.+|++|.+++.++++       
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------
Confidence            468899999999999999999999999999999998764311        13468899999999999888765       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDG  219 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  219 (339)
                      ..|++||++|...+...         .+++..++..++    +.+++. +-.++|++||.......        ....+.
T Consensus        67 ~~d~vi~~~g~~~~~~~---------~~~~~~~~~~l~----~aa~~~-~v~r~i~~ss~~~~~~~--------~~~~~~  124 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLSP---------TTVMSEGARNIV----AAMKAH-GVDKVVACTSAFLLWDP--------TKVPPR  124 (205)
T ss_dssp             TCSEEEECCCCTTCCSC---------CCHHHHHHHHHH----HHHHHH-TCCEEEEECCGGGTSCT--------TCSCGG
T ss_pred             CCCEEEEEeccCCchhh---------hhhhHHHHHHHH----HHHHhc-CCCeEEEEeeeeccCCC--------cccccc
Confidence            68999999987543211         123444444444    445555 56789999987765321        012334


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-HHHHHhccCCCHHHHHHHHHHHhccCC
Q 019551          220 MEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-FNERFAGNLRTSEEGADTVLWLALQPK  294 (339)
Q Consensus       220 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~e~A~~v~~l~s~~~  294 (339)
                      ...|...|.+.+.+.       +..|++...|+||.+........... ........+.+.+|+|+.++.++.++.
T Consensus       125 ~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  193 (205)
T d1hdoa_         125 LQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE  193 (205)
T ss_dssp             GHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             ccccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence            456777777665443       34689999999998864322211100 000012234679999999999986543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-16  Score=141.64  Aligned_cols=216  Identities=15%  Similarity=0.097  Sum_probs=144.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+||||||+|.||++++++|.++|++|++++|....-.+   .+.......++.+...|+.+.            .+.++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWIGHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGTTCTTEEEEECCTTSC------------CCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH---HHHHhcCCCceEEEehHHHHH------------HHcCC
Confidence            789999999999999999999999999999874321111   111111223455555555322            22469


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc----cccccCCCC
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD----DLEFNSGSF  217 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~----~~~~~~~~~  217 (339)
                      |+|||+|+......  ..++..+.+++|+.|+..+++++..    .  +.++|++||.+.+......    +......+.
T Consensus        67 d~VihlAa~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~~~~----~--~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          67 DQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKR----V--GARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             SEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHH----H--TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             CEEEECcccCCchh--HHhCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            99999998654211  2244567789999999999987643    2  3589999998877542111    111122344


Q ss_pred             cchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc----hhHHHHH-h-------------ccCCCH
Q 019551          218 DGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM----PSFNERF-A-------------GNLRTS  279 (339)
Q Consensus       218 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~~~~~~-~-------------~~~~~~  279 (339)
                      .+...|+.||.+.+.+++.++.++   |+.+..++|+.|..|......    +...... .             ..+...
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v  215 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  215 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence            567889999999999999988875   799999999999987644321    2222211 0             124468


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      +|++++++.++...    .+|.|.+..+
T Consensus       216 ~D~~~~~~~~~~~~----~~~~~n~~~~  239 (312)
T d2b69a1         216 SDLVNGLVALMNSN----VSSPVNLGNP  239 (312)
T ss_dssp             HHHHHHHHHHHTSS----CCSCEEESCC
T ss_pred             HHHHHHHHHHHhhc----cCCceEecCC
Confidence            99999998887532    3556655443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=8.8e-17  Score=146.32  Aligned_cols=183  Identities=15%  Similarity=0.120  Sum_probs=129.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+||||||||.||.+++++|+++|++|+++++....-........... ..++.++.+|++|.++++.++...     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            789999999999999999999999999999763221111111111111 346888999999999999988754     69


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc--c-cccCCCCc
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD--L-EFNSGSFD  218 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~--~-~~~~~~~~  218 (339)
                      |++||+|+.....  ...+.......+|+.++..+++++...     +..++|++||...+......+  . .....+..
T Consensus        76 d~VihlAa~~~~~--~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          76 DSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             CEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             CEEEEcccccccc--ccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeecCcccCCCCCccccccCCC
Confidence            9999999975421  123444667889999999999987543     456899999988775322111  1 11123334


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAET  258 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T  258 (339)
                      +...|+.||.+.+.+++.+.... ..++++..++|+.+..
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred             CCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEe
Confidence            45689999999999988876543 3577887877766654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=2.9e-16  Score=145.24  Aligned_cols=187  Identities=16%  Similarity=0.145  Sum_probs=132.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC----------------chhHHHHHHHHHhhcCCccEEEEeccCCCH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRS----------------KEKGETALSAIRSKTGNENVHLELCDLSSI  124 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~  124 (339)
                      |++||||||||.||.+++++|+++|++|+++|.-                .....+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            6899999999999999999999999999998721                111122222222222 34789999999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCC-CCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNR-LITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYT  203 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~  203 (339)
                      +.++++++..     ++|+|||.|+...... ..+.+.....+++|+.|+..+++++...    +...++++.||...+.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~~i~~ss~~~~~  150 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYG  150 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGC
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHh----ccccceeecccccccc
Confidence            9999999875     7999999998754322 2455666778899999999998876433    2345677777766553


Q ss_pred             cccCc-c--cc---------ccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCC
Q 019551          204 AHLTD-D--LE---------FNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPG  260 (339)
Q Consensus       204 ~~~~~-~--~~---------~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  260 (339)
                      ..... +  ..         ....+..+...|+.||.+.+.+++.++.++   |+++..+.|+.+..+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            21100 0  00         000123344679999999999998887764   7999999999888764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.8e-16  Score=140.64  Aligned_cols=183  Identities=15%  Similarity=0.111  Sum_probs=130.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEec------CchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCR------SKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      |+||||||+|.||.+++++|+++|++|++++|      +........+.+.... ..++.++.+|++|.+.+++++..  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeeccccccccccccc--
Confidence            78999999999999999999999999999874      2222222222222221 35789999999999999988775  


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                         ..+++++|+|+.....  .+.+.....+++|+.|+..+++++..    . +-.+++++||...+.............
T Consensus        80 ---~~~~~i~h~Aa~~~~~--~~~~~p~~~~~~Nv~gt~~l~~~~~~----~-~v~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----H-GVKNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             ---CCEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ---cccccccccccccCcH--hhHhCHHHHHHhhhcccccccchhhh----c-Ccccccccccceeeecccccccccccc
Confidence               3788999999875421  23344567789999999998887632    2 456899999887775543322222222


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCC
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETP  259 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~  259 (339)
                      .......|+.+|.+.+...+.++..  ..++....+.|+.+.++
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence            2334557999999999888876653  35788888888877765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.6e-15  Score=137.41  Aligned_cols=219  Identities=13%  Similarity=0.097  Sum_probs=150.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +||||||||.||.+++++|+++|+ +|+++++..+.....       ....++.++.+|+++.+++.+.+.+      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~-------~~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh-------ccCCCeEEEECccCChHHHHHHHHh------CC
Confidence            589999999999999999999994 899998865542211       1235799999999988776654332      58


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc------cccCC
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL------EFNSG  215 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~------~~~~~  215 (339)
                      |++||+|+......  ..+.....+.+|+.|+..+++++..      .+.+.+++||...+........      .....
T Consensus        69 d~Vih~a~~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~------~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          69 DVVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVK------YRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             SEEEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHH------TTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             Cccccccccccccc--cccCCcccccccccccccccccccc------ccccccccccccccccccccccccccccccccc
Confidence            99999999754321  2344567789999999999998633      2456778888776654322111      11112


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc----------chhHHHHH-h-----------
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS----------MPSFNERF-A-----------  273 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~----------~~~~~~~~-~-----------  273 (339)
                      ...+...|+.||.+.+.+++.++..+   |+.+..+.|..+..+.....          ........ .           
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence            33456789999999999999888775   78899999988887643221          11111111 0           


Q ss_pred             --ccCCCHHHHHHHHHHHhccCCCCCCCcceeeC
Q 019551          274 --GNLRTSEEGADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       274 --~~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                        +.+...+|+++++..++..+.....++.|.+.
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig  251 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG  251 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEEC
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEe
Confidence              12567999999999998765443344455553

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=1.2e-15  Score=138.26  Aligned_cols=229  Identities=14%  Similarity=0.076  Sum_probs=155.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH---HHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS---AIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+-|++|||||||.||.+++++|.++|++|++++|....-.....   .+........+.++.+|..|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            356899999999999999999999999999999873321111111   11111112468899999999987765543   


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                          ..+.++|.++.....  .+.++....+++|+.|+..+++++...     +..++|++||.+.++.....+. .+..
T Consensus        91 ----~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~~~~~-~E~~  158 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDHPGLPK-VEDT  158 (341)
T ss_dssp             ----TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSSB-CTTC
T ss_pred             ----ccccccccccccccc--ccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceeeCCCCCCCc-cCCC
Confidence                678888888654321  244667778999999999999877432     4568999999988764322221 1223


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHHh--------------cc
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERFA--------------GN  275 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~~--------------~~  275 (339)
                      +..+...|+.||.+.+.+++.++...   ++++..++|+.+.++.....      .+.......              +.
T Consensus       159 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~  235 (341)
T d1sb8a_         159 IGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD  235 (341)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEE
Confidence            34456789999999999999988765   68999999998887653321      111111111              12


Q ss_pred             CCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          276 LRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       276 ~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      +.-.+|++.++..++..+.. ..++.|.+..
T Consensus       236 ~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~  265 (341)
T d1sb8a_         236 FCYIENTVQANLLAATAGLD-ARNQVYNIAV  265 (341)
T ss_dssp             CEEHHHHHHHHHHHHTCCGG-GCSEEEEESC
T ss_pred             EEEEeccchhhhhhhhcccc-ccceeeeecc
Confidence            45579999998888754332 3344555533

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=3.9e-16  Score=139.79  Aligned_cols=165  Identities=15%  Similarity=0.130  Sum_probs=126.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      .|+||||||||.||.+++++|+++|+.|+++++..+                      +|+.+.+.+.++++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999887765321                      6899999999887753     6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc----cccccCCC
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD----DLEFNSGS  216 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~----~~~~~~~~  216 (339)
                      +|.++|+|+...... .......+.+++|+.|+..+++++...     +-.++|++||.+.+......    +......+
T Consensus        55 ~d~v~~~a~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIV-ANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             CSEEEECCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CCEEEEcchhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            899999997654211 233445566889999999998876432     45689999999887643221    22222234


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCc
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGV  261 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  261 (339)
                      .+....|+.||.+.+.+++.+..+.   |+++..+.|+.|..|..
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            4456789999999999999998775   79999999999988743

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=4.3e-16  Score=141.64  Aligned_cols=223  Identities=15%  Similarity=0.178  Sum_probs=146.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |.||||||||.||.+++++|.++|+.|.+++++.-.-......+ ......++.++.+|+.|.+.+..++.       ..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            68999999999999999999999987554443210000000011 11223579999999999999988765       57


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCcc-----------c
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDD-----------L  210 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~-----------~  210 (339)
                      |.++|.|+......  ...+.+..+++|+.|+..++..+...      +.++|++||...+.......           .
T Consensus        75 ~~v~~~a~~~~~~~--~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~  146 (346)
T d1oc2a_          75 DAIVHYAAESHNDN--SLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEK  146 (346)
T ss_dssp             SEEEECCSCCCHHH--HHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSS
T ss_pred             hhhhhhhhcccccc--hhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccccCcccc
Confidence            78999987665322  22445677899999999998876433      35788888877664321110           1


Q ss_pred             cccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHH--------------hc
Q 019551          211 EFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERF--------------AG  274 (339)
Q Consensus       211 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~--------------~~  274 (339)
                      .....+..+...|+.+|.+.+.+++.++.++   |+++..+.|+.|..|.....  ........              ..
T Consensus       147 ~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r  223 (346)
T d1oc2a_         147 FTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVR  223 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEE
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccc
Confidence            1111233345689999999999999888775   79999999999998743221  11111111              12


Q ss_pred             cCCCHHHHHHHHHHHhccCCCCCCCcceeeCC
Q 019551          275 NLRTSEEGADTVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       275 ~~~~~~e~A~~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      .+...+|+|++++.++..+.   .++.+++-+
T Consensus       224 ~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~  252 (346)
T d1oc2a_         224 DWIHTNDHSTGVWAILTKGR---MGETYLIGA  252 (346)
T ss_dssp             ECEEHHHHHHHHHHHHHHCC---TTCEEEECC
T ss_pred             cccchhhHHHHHHHHHhhcc---cCccccccc
Confidence            35568999999988875433   345555433

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.67  E-value=5.9e-16  Score=140.86  Aligned_cols=219  Identities=17%  Similarity=0.161  Sum_probs=151.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||+||||||||.||.++++.|.++|++|++++|+..+.....+....   ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            5799999999999999999999999999999999987654444333221   236889999999999999988865    


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       .+|+++|+|+.....  .+.+..+..+.+|+.|+..+++++...    +....+++.||.................+..
T Consensus        79 -~~~~v~~~aa~~~~~--~~~~~~~~~~~~Nv~g~~n~l~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLVR--LSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             -CCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             -hhhhhhhhhcccccc--ccccCCccccccccccchhhhhhhhcc----ccccccccccccccccccccccccccccccC
Confidence             789999999865321  234556778999999999988877542    1334555555544433222221222223444


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHc------CCCeEEEEeeCCcccCCCccC---cchhHHHHHh-------------ccC
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYK------EKGIGFYSMHPGWAETPGVAK---SMPSFNERFA-------------GNL  276 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~------~~gI~v~~v~PG~v~T~~~~~---~~~~~~~~~~-------------~~~  276 (339)
                      +...|+.+|.+.+.+++.++.++.      ..++.+..+.|+.+..|....   ..+.......             ..+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            567899999999999999888764      247889999999888764211   1122222211             123


Q ss_pred             CCHHHHHHHHHHHhc
Q 019551          277 RTSEEGADTVLWLAL  291 (339)
Q Consensus       277 ~~~~e~A~~v~~l~s  291 (339)
                      ...+|++.++..++.
T Consensus       232 ~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             EETHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhh
Confidence            456788888777764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=2.2e-15  Score=137.67  Aligned_cols=209  Identities=15%  Similarity=0.078  Sum_probs=145.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.+||||||+|.||.+++++|.++|++|++++|.....      ....  .....+..+|+.+.+++.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            566799999999999999999999999999998754321      0011  1234677789999988776654       


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc----c--cc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL----E--FN  213 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~----~--~~  213 (339)
                      .+|.+||+|+...... ...+.....+.+|+.++..++.++...     +-.++|++||...+......+.    .  ..
T Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             cCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhh-----Ccccccccccccccccccccccccccccccc
Confidence            6899999998765322 223456777889999999988876433     4578999999887754321110    0  01


Q ss_pred             CCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hh-----HHHHH--------------
Q 019551          214 SGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PS-----FNERF--------------  272 (339)
Q Consensus       214 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~-----~~~~~--------------  272 (339)
                      ..+..+...|+.||.+.+.+++.+..++   |+++..+.|+.+..+......  ..     .....              
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence            1233345689999999999999888775   799999999999986432211  00     00000              


Q ss_pred             hccCCCHHHHHHHHHHHhcc
Q 019551          273 AGNLRTSEEGADTVLWLALQ  292 (339)
Q Consensus       273 ~~~~~~~~e~A~~v~~l~s~  292 (339)
                      .+.+...+|+++++++++..
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~  249 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKS  249 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHS
T ss_pred             EEEEeehhHHHHHHHHHHhC
Confidence            11255688999999998753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.63  E-value=1.3e-15  Score=137.09  Aligned_cols=222  Identities=14%  Similarity=0.138  Sum_probs=150.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEE------EEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVY------MVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vv------l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +||||||+|.||.+++++|+++|+.|.      ..++......  ...+.......++.++.+|.++.........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhcccc----
Confidence            589999999999999999999998654      3332210000  0111111123578999999999987765433    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                         .+|.++|+|+.....  ...+..+..+++|+.++..+++++...     +..++|++||.+.+......+. .+..+
T Consensus        76 ---~~d~vi~~a~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss~~~yg~~~~~~~-~E~~~  144 (322)
T d1r6da_          76 ---GVDAIVHFAAESHVD--RSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSIDSGSW-TESSP  144 (322)
T ss_dssp             ---TCCEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCSSSCB-CTTSC
T ss_pred             ---ccceEEeeccccccc--ccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeecceeecCCCCCCC-CCCCC
Confidence               789999999765322  234556677899999999999887432     4578999999888764322221 12233


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc--chhHHHHHh--------------ccCCCHH
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS--MPSFNERFA--------------GNLRTSE  280 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~--------------~~~~~~~  280 (339)
                      ..+...|+.||.+.+.+++.++.++   |+++..++|+.|..|.....  .+.......              +.+...+
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~  221 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence            4456789999999999999998775   79999999999998754321  222222211              1245689


Q ss_pred             HHHHHHHHHhccCCCCCCCcceeeCCC
Q 019551          281 EGADTVLWLALQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       281 e~A~~v~~l~s~~~~~~~~G~~~~d~~  307 (339)
                      |+|++++.++..+..   ++.|.+..+
T Consensus       222 D~a~ai~~~~~~~~~---~~~~ni~~~  245 (322)
T d1r6da_         222 DHCRGIALVLAGGRA---GEIYHIGGG  245 (322)
T ss_dssp             HHHHHHHHHHHHCCT---TCEEEECCC
T ss_pred             HHHHHHHHHHhCCCC---CCeeEEeec
Confidence            999999999875432   455555433

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.63  E-value=1e-14  Score=131.12  Aligned_cols=166  Identities=15%  Similarity=0.181  Sum_probs=113.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSK-EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      +||||||+|.||.+++++|+++|++|+++++-. .........+..   ..++.++.+|++|.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            589999999999999999999999999987532 222222223322   346889999999999999988865     68


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccc-----------
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDL-----------  210 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~-----------  210 (339)
                      |++||+|+.....  ...++.+..+++|+.|+..+++++...    +....|++.|+..........+.           
T Consensus        74 d~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~  147 (338)
T d1orra_          74 DSCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD  147 (338)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred             ceEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccccccccccccccccccccc
Confidence            9999999876432  123455778899999999999876433    12334444444333222111000           


Q ss_pred             ----cccCCCCcchHHHHHhHHHHHHHHHHHHHHHc
Q 019551          211 ----EFNSGSFDGMEQYARNKRVQVALTEKWSEMYK  242 (339)
Q Consensus       211 ----~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~  242 (339)
                          ........+...|+.+|...+.+.......+.
T Consensus       148 ~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         148 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence                00112344567899999999999988888764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7.3e-16  Score=132.34  Aligned_cols=200  Identities=17%  Similarity=0.136  Sum_probs=135.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      ++++|+||||||||.||++++++|.++|.  +|++++|++.....      ..  ...+....+|+.+.+++...+    
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~--~~~i~~~~~D~~~~~~~~~~~----   78 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EA--YKNVNQEVVDFEKLDDYASAF----   78 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GG--GGGCEEEECCGGGGGGGGGGG----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cc--cceeeeeeecccccccccccc----
Confidence            46789999999999999999999999995  89999998653221      01  135677778888776654333    


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSG  215 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~  215 (339)
                         ...|++||++|...     .........++|+.++..+++.+..    . +-.++|++|+.....            
T Consensus        79 ---~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~fi~~Ss~~~~~------------  133 (232)
T d2bkaa1          79 ---QGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKA----G-GCKHFNLLSSKGADK------------  133 (232)
T ss_dssp             ---SSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCT------------
T ss_pred             ---cccccccccccccc-----cccchhhhhhhcccccceeeecccc----c-CccccccCCcccccc------------
Confidence               36899999998642     2233455678899999888887632    2 467899999987652            


Q ss_pred             CCcchHHHHHhHHHHHHHHHHHHHHHcCCCe-EEEEeeCCcccCCCccCcchh-HHHHHh---------ccCCCHHHHHH
Q 019551          216 SFDGMEQYARNKRVQVALTEKWSEMYKEKGI-GFYSMHPGWAETPGVAKSMPS-FNERFA---------GNLRTSEEGAD  284 (339)
Q Consensus       216 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~~~~~~~-~~~~~~---------~~~~~~~e~A~  284 (339)
                        .....|+.+|...+...+       ..|. ++..++||.+..+........ ......         ......+|+|+
T Consensus       134 --~~~~~Y~~~K~~~E~~l~-------~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~  204 (232)
T d2bkaa1         134 --SSNFLYLQVKGEVEAKVE-------ELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVR  204 (232)
T ss_dssp             --TCSSHHHHHHHHHHHHHH-------TTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHH
T ss_pred             --CccchhHHHHHHhhhccc-------cccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHH
Confidence              123469999987775443       2344 477889999998754322111 111111         12345799999


Q ss_pred             HHHHHhccCCCCCCCcceeeCC
Q 019551          285 TVLWLALQPKEKLVSGSFYFDR  306 (339)
Q Consensus       285 ~v~~l~s~~~~~~~~G~~~~d~  306 (339)
                      ++++++..+..   ++.++++.
T Consensus       205 a~i~~~~~~~~---~~~~i~~~  223 (232)
T d2bkaa1         205 AMLNNVVRPRD---KQMELLEN  223 (232)
T ss_dssp             HHHHHHTSCCC---SSEEEEEH
T ss_pred             HHHHHHhcCcc---CCeEEEcH
Confidence            99998865443   44455543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.57  E-value=8e-14  Score=128.11  Aligned_cols=188  Identities=16%  Similarity=0.149  Sum_probs=132.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEec---------CchhHHHHHHHHHhh------cCCccEEEEeccCCCH
Q 019551           61 GKNCVVTGANAGIGYATAEGLAS-RGATVYMVCR---------SKEKGETALSAIRSK------TGNENVHLELCDLSSI  124 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~Dl~~~  124 (339)
                      +.+||||||+|.||..++++|++ .|++|+++|+         ..+..+.....+...      ..+..+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34699999999999999999986 7999999874         122233333333221      1234678899999999


Q ss_pred             HHHHHHHHHHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccccc
Q 019551          125 TEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTA  204 (339)
Q Consensus       125 ~~v~~~~~~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~  204 (339)
                      +.++++++..    .++|++||.|+......  ..+.....+++|+.++..+++++...     +..++++++|...+..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~~--~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVGE--SVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBS
T ss_pred             HHhhhhhhcc----ceeehhhcccccccccc--cccccccccccccccccccchhhhcc-----CCcccccccccccccc
Confidence            9999888754    47899999998765321  22445567889999999998876432     4567777777665543


Q ss_pred             ccCcc------ccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCcc
Q 019551          205 HLTDD------LEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVA  262 (339)
Q Consensus       205 ~~~~~------~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  262 (339)
                      .....      .........+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+..|...
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence            21111      11122334456789999999999998887764   799999999998876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=3.5e-14  Score=121.12  Aligned_cols=206  Identities=13%  Similarity=0.079  Sum_probs=130.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGAT--VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~--Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++||||||||+||++++++|+++|+.  |+.+.|++++....         ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            69999999999999999999999965  66677887654321         2357788999999999888765       


Q ss_pred             CccEEEEccccccCCCC-----------CChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCc
Q 019551          140 PVHVLVNNAGVLENNRL-----------ITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTD  208 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~-----------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~  208 (339)
                      .+|.+||+|+.......           ...........+|+.++..+.......     ..+...+.++.....+..  
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~--  140 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNPDH--  140 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCTTC--
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccccccccccccCCCCc--
Confidence            68999999986542111           122345566788888888777655433     456777777655442210  


Q ss_pred             cccccCCCCcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcc--hhHHH---HHhccCCCHHHHH
Q 019551          209 DLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSM--PSFNE---RFAGNLRTSEEGA  283 (339)
Q Consensus       209 ~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~--~~~~~---~~~~~~~~~~e~A  283 (339)
                           .........|...+.+..    .+..   ..|+++..++||.+..+......  .....   .....+...+|+|
T Consensus       141 -----~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  208 (252)
T d2q46a1         141 -----PLNKLGNGNILVWKRKAE----QYLA---DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVA  208 (252)
T ss_dssp             -----GGGGGGGCCHHHHHHHHH----HHHH---HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHH
T ss_pred             -----ccccccccchhhhhhhhh----hhhh---cccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHH
Confidence                 001111223444433322    2222   36899999999999887432210  00000   0112345789999


Q ss_pred             HHHHHHhccCCCCCCCcceee
Q 019551          284 DTVLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       284 ~~v~~l~s~~~~~~~~G~~~~  304 (339)
                      ++++.++..+..  .+..|.+
T Consensus       209 ~a~~~~l~~~~~--~g~~~~i  227 (252)
T d2q46a1         209 EVCIQALLFEEA--KNKAFDL  227 (252)
T ss_dssp             HHHHHHTTCGGG--TTEEEEE
T ss_pred             HHHHHHhCCccc--cCcEEEE
Confidence            999999875442  3445545

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.44  E-value=2e-12  Score=113.01  Aligned_cols=196  Identities=15%  Similarity=0.261  Sum_probs=132.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||||.||.+++++|.++|++|+.++|++                       +|++|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999999999999999853                       5999999999988865     689


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      ++||+|+.....  ......+..+..|......+.......      ...+++.||...+......+. .+.....+...
T Consensus        55 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~-~e~~~~~~~~~  125 (281)
T d1vl0a_          55 VVINCAAHTAVD--KCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPI-TEFDEVNPQSA  125 (281)
T ss_dssp             EEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCB-CTTSCCCCCSH
T ss_pred             EEEeeccccccc--cccccchhhcccccccccccccccccc------cccccccccceeeeccccccc-cccccccchhh
Confidence            999999865421  123344566777777776666654332      356667776655543222211 11223445678


Q ss_pred             HHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchhHHHHHh------------ccCCCHHHHHHHHHHHh
Q 019551          223 YARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPSFNERFA------------GNLRTSEEGADTVLWLA  290 (339)
Q Consensus       223 Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------------~~~~~~~e~A~~v~~l~  290 (339)
                      |+.+|.+.+.+.+.       .+.+...+.|+++..+... ..........            ..+...+|+++++.+++
T Consensus       126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~  197 (281)
T d1vl0a_         126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNN-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI  197 (281)
T ss_dssp             HHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSC-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcc-cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhh
Confidence            99999887765543       3567888999999887532 2122221111            23567999999999998


Q ss_pred             ccCCCCCCCcceeeCCC
Q 019551          291 LQPKEKLVSGSFYFDRA  307 (339)
Q Consensus       291 s~~~~~~~~G~~~~d~~  307 (339)
                      ....    .|.|.+-++
T Consensus       198 ~~~~----~g~~~~~~~  210 (281)
T d1vl0a_         198 DEKN----YGTFHCTCK  210 (281)
T ss_dssp             HHTC----CEEEECCCB
T ss_pred             hhcc----cCceeEeCC
Confidence            6432    355655433

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.41  E-value=4.2e-13  Score=112.98  Aligned_cols=183  Identities=15%  Similarity=0.102  Sum_probs=118.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++|||||||.||++++++|.++|+  +|++..|++..            ...++   ..+..|..++      .....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~~---~~~~~d~~~~------~~~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRL---DNPVGPLAEL------LPQLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTE---ECCBSCHHHH------GGGCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hcccc---cccccchhhh------hhccc
Confidence            48999999999999999999999998  67777776431            01233   3344444432      22234


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      +.+|.+|+++|.....    ...-+...++|+.++..+++.+.    + .+..+++++||.++..              .
T Consensus        61 ~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~----~-~~v~~~i~~Ss~~~~~--------------~  117 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRAL----E-MGARHYLVVSALGADA--------------K  117 (212)
T ss_dssp             SCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHH----H-TTCCEEEEECCTTCCT--------------T
T ss_pred             cchheeeeeeeeeccc----cccccccccchhhhhhhcccccc----c-cccccccccccccccc--------------c
Confidence            5789999999865321    12234567889999988888652    2 2567899999977652              2


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCe-EEEEeeCCcccCCCccCcchhHHHH-----Hhc--cCCCHHHHHHHHHHHh
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGI-GFYSMHPGWAETPGVAKSMPSFNER-----FAG--NLRTSEEGADTVLWLA  290 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~--~~~~~~e~A~~v~~l~  290 (339)
                      ....|..+|...+...+       ..+. +...++|+.+..+............     +.+  +....+|+|++++.++
T Consensus       118 ~~~~y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~  190 (212)
T d2a35a1         118 SSIFYNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLA  190 (212)
T ss_dssp             CSSHHHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHH
Confidence            24579999987765443       3344 5788999999876433211111000     001  1246789999999998


Q ss_pred             ccCC
Q 019551          291 LQPK  294 (339)
Q Consensus       291 s~~~  294 (339)
                      .++.
T Consensus       191 ~~~~  194 (212)
T d2a35a1         191 LEEG  194 (212)
T ss_dssp             TCCC
T ss_pred             cCCC
Confidence            6543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.40  E-value=1.2e-12  Score=115.87  Aligned_cols=202  Identities=11%  Similarity=0.083  Sum_probs=119.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++||||||||.||++++++|.++|++|+++.|+.........+.........+.++.+|+.|.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            45999999999999999999999999999999764322111111111123468899999999999887665       57


Q ss_pred             cEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchH
Q 019551          142 HVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGME  221 (339)
Q Consensus       142 d~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  221 (339)
                      +.++++++....             ..|..+...++.++    .+. ...++++.||.+......       ..+.....
T Consensus        77 ~~~~~~~~~~~~-------------~~~~~~~~~~l~~a----~~~-~~~~~v~~Ss~g~~~~~~-------~~~~~~~~  131 (312)
T d1qyda_          77 DVVISALAGGVL-------------SHHILEQLKLVEAI----KEA-GNIKRFLPSEFGMDPDIM-------EHALQPGS  131 (312)
T ss_dssp             SEEEECCCCSSS-------------STTTTTHHHHHHHH----HHS-CCCSEEECSCCSSCTTSC-------CCCCSSTT
T ss_pred             chhhhhhhhccc-------------ccchhhhhHHHHHH----HHh-cCCcEEEEeeccccCCCc-------ccccchhh
Confidence            888888865321             12333333444433    222 345666666654432110       11223334


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcch-------hHH-------HHHhccCCCHHHHHHHHH
Q 019551          222 QYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP-------SFN-------ERFAGNLRTSEEGADTVL  287 (339)
Q Consensus       222 ~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-------~~~-------~~~~~~~~~~~e~A~~v~  287 (339)
                      .|..+|.+.+.+.       ...|+.+..++||.+..+.......       ...       ......+...+|+|++++
T Consensus       132 ~~~~~~~~~~~~~-------~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  204 (312)
T d1qyda_         132 ITFIDKRKVRRAI-------EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  204 (312)
T ss_dssp             HHHHHHHHHHHHH-------HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hhhHHHHHHHHhh-------cccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHH
Confidence            5666666554432       2357888888888876432111100       000       000123578999999999


Q ss_pred             HHhccCCCCCCCcceee
Q 019551          288 WLALQPKEKLVSGSFYF  304 (339)
Q Consensus       288 ~l~s~~~~~~~~G~~~~  304 (339)
                      .++.++.  ..++.++.
T Consensus       205 ~~l~~~~--~~~~~~~~  219 (312)
T d1qyda_         205 KSIDDPQ--TLNKTMYI  219 (312)
T ss_dssp             HHTTCGG--GSSSEEEC
T ss_pred             HHhcCcc--ccCceEEE
Confidence            9986543  23444443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.24  E-value=4.5e-11  Score=104.74  Aligned_cols=197  Identities=11%  Similarity=0.114  Sum_probs=115.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGET--ALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|+||||||||.||++++++|.++|++|++++|+......  ....+.... ...+.++.+|+.+.....+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh------
Confidence            5789999999999999999999999999999997654221  112222211 2457889999999998887766      


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                       ..+.+|++++....                 .+...+.+++    ... ....+++.||.......        .....
T Consensus        76 -~~~~vi~~~~~~~~-----------------~~~~~~~~a~----~~~-~~~~~~~~s~~~~~~~~--------~~~~~  124 (307)
T d1qyca_          76 -NVDVVISTVGSLQI-----------------ESQVNIIKAI----KEV-GTVKRFFPSEFGNDVDN--------VHAVE  124 (307)
T ss_dssp             -TCSEEEECCCGGGS-----------------GGGHHHHHHH----HHH-CCCSEEECSCCSSCTTS--------CCCCT
T ss_pred             -hceeeeeccccccc-----------------chhhHHHHHH----HHh-ccccceeeecccccccc--------ccccc
Confidence             57889998865321                 1122222322    222 34556666664432211        01122


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh----H---------HHHHhccCCCHHHHHHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS----F---------NERFAGNLRTSEEGADT  285 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~---------~~~~~~~~~~~~e~A~~  285 (339)
                      ....|...+.....+.    .   ..|+....+.|+.+..+........    .         .......+...+|+|++
T Consensus       125 ~~~~~~~~~~~~~~~~----~---~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  197 (307)
T d1qyca_         125 PAKSVFEVKAKVRRAI----E---AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTF  197 (307)
T ss_dssp             THHHHHHHHHHHHHHH----H---HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             cccccccccccccchh----h---ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHH
Confidence            2333444444333322    2   2477888899988875432211000    0         00011236689999999


Q ss_pred             HHHHhccCCCCCCCcceee
Q 019551          286 VLWLALQPKEKLVSGSFYF  304 (339)
Q Consensus       286 v~~l~s~~~~~~~~G~~~~  304 (339)
                      ++.++..+..  .++.+++
T Consensus       198 ~~~~l~~~~~--~~~~~~~  214 (307)
T d1qyca_         198 TIKAVDDPRT--LNKTLYL  214 (307)
T ss_dssp             HHTTSSCGGG--TTEEEEC
T ss_pred             HHHHhcChhh--cCceeEE
Confidence            9999865432  3444443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.24  E-value=2.1e-11  Score=106.97  Aligned_cols=139  Identities=15%  Similarity=0.154  Sum_probs=97.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      ++|||||+|.||.++++.|.+.|.. +.++++...                   +.+|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            4899999999999999999998864 444544321                   236999999999988876     689


Q ss_pred             EEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcchHH
Q 019551          143 VLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGMEQ  222 (339)
Q Consensus       143 ~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  222 (339)
                      +|||+||......  +.+..+..+++|+.++..+..++.     . .+.+++++||...+......+ ..+..+..+...
T Consensus        57 ~Vih~Aa~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~-----~-~~~~~~~~ss~~~~~~~~~~~-~~E~~~~~p~~~  127 (298)
T d1n2sa_          57 VIVNAAAHTAVDK--AESEPELAQLLNATSVEAIAKAAN-----E-TGAWVVHYSTDYVFPGTGDIP-WQETDATSPLNV  127 (298)
T ss_dssp             EEEECCCCCCHHH--HTTCHHHHHHHHTHHHHHHHHHHT-----T-TTCEEEEEEEGGGSCCCTTCC-BCTTSCCCCSSH
T ss_pred             EEEEecccccccc--cccCccccccccccccccchhhhh-----c-cccccccccccccccCCCCCC-CccccccCCCch
Confidence            9999999764221  234446678899999988887652     2 356788888876654322211 112233445678


Q ss_pred             HHHhHHHHHHHHH
Q 019551          223 YARNKRVQVALTE  235 (339)
Q Consensus       223 Y~~sKaa~~~l~~  235 (339)
                      |+.+|.+.+.+.+
T Consensus       128 y~~~k~~~e~~~~  140 (298)
T d1n2sa_         128 YGKTKLAGEKALQ  140 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHH
Confidence            9999988776543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.21  E-value=7.3e-11  Score=106.53  Aligned_cols=198  Identities=12%  Similarity=-0.008  Sum_probs=113.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHH-HHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEI-KSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v-~~~~~~~~~~~  138 (339)
                      +.|+++||||||.||.+++++|.++|++|+++.|+.++...  .++..   ...+.++.+|+.|..++ +.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            46899999999999999999999999999999998876432  22221   23688999999986653 3333       


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCc
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFD  218 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~  218 (339)
                      ...|.++.+.....              ..|+.....++.++    .+. +..++++.||.......          +..
T Consensus        70 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~aa----~~a-gv~~~v~~Ss~~~~~~~----------~~~  120 (350)
T d1xgka_          70 EGAHLAFINTTSQA--------------GDEIAIGKDLADAA----KRA-GTIQHYIYSSMPDHSLY----------GPW  120 (350)
T ss_dssp             TTCSEEEECCCSTT--------------SCHHHHHHHHHHHH----HHH-SCCSEEEEEECCCGGGT----------SSC
T ss_pred             cCCceEEeeccccc--------------chhhhhhhHHHHHH----HHh-CCCceEEEeeccccccC----------Ccc
Confidence            35677766543211              11223333344443    233 34556666765443221          112


Q ss_pred             chHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCcchh-----HHH-H-----H-----hccCCC-HHH
Q 019551          219 GMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMPS-----FNE-R-----F-----AGNLRT-SEE  281 (339)
Q Consensus       219 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~-~-----~-----~~~~~~-~~e  281 (339)
                      ....|..+|...+.+.+       ..++....+.||...........+.     ... .     +     .-.+.+ .+|
T Consensus       121 ~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~D  193 (350)
T d1xgka_         121 PAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHD  193 (350)
T ss_dssp             CCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred             cchhhhhhHHHHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHH
Confidence            22345566765554433       3467788888887655332111100     000 0     0     001223 479


Q ss_pred             HHHHHHHHhccCCCCCCCcceeeC
Q 019551          282 GADTVLWLALQPKEKLVSGSFYFD  305 (339)
Q Consensus       282 ~A~~v~~l~s~~~~~~~~G~~~~d  305 (339)
                      +++.+..++.++...+.+..|.+.
T Consensus       194 va~~v~~~l~~~~~~~~G~~~~~~  217 (350)
T d1xgka_         194 VGPALLQIFKDGPQKWNGHRIALT  217 (350)
T ss_dssp             HHHHHHHHHHHCHHHHTTCEEEEC
T ss_pred             HHHHHHHHHhCChhhcCCeEEEEe
Confidence            999999888654433333334444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.02  E-value=6.2e-14  Score=116.35  Aligned_cols=48  Identities=25%  Similarity=0.362  Sum_probs=43.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG  110 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~  110 (339)
                      ++.|+||+|+||+++|+.|++.|++|++.+|+++++++..+++....+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            467888889999999999999999999999999999999999887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=1.6e-09  Score=94.92  Aligned_cols=214  Identities=13%  Similarity=0.089  Sum_probs=124.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh--cCCCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS--LKNKP  140 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~~~  140 (339)
                      ||||||+|.||..++++|+++|+ .|+++++-... .+.. .+.+.        ..+|..+.+..   .+...  ..+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~-~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFV-NLVDL--------NIADYMDKEDF---LIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGH-HHHTS--------CCSEEEEHHHH---HHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhh-ccccc--------chhhhccchHH---HHHHhhhhcccc
Confidence            79999999999999999999997 57777632221 1111 11110        11233333332   33332  34567


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCCCcch
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGSFDGM  220 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~  220 (339)
                      ++.++|.|+.....    ....+...+.|+.++..+.+++...     . .++++.||...+....... ........+.
T Consensus        69 ~~~i~~~aa~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~-----~-i~~v~~ss~~~~~~~~~~~-~~~~~~~~~~  137 (307)
T d1eq2a_          69 VEAIFHEGACSSTT----EWDGKYMMDNNYQYSKELLHYCLER-----E-IPFLYASSAATYGGRTSDF-IESREYEKPL  137 (307)
T ss_dssp             CCEEEECCSCCCTT----CCCHHHHHHHTHHHHHHHHHHHHHH-----T-CCEEEEEEGGGGTTCCSCB-CSSGGGCCCS
T ss_pred             hhhhhhhccccccc----ccccccccccccccccccccccccc-----c-ccccccccccccccccccc-cccccccccc
Confidence            88999998754422    2334556677888887777665332     2 2355555554443321111 1111223455


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHcCCCeEEEEeeCCcccCCCccCc------chhHHHHH---------------hccCCCH
Q 019551          221 EQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKS------MPSFNERF---------------AGNLRTS  279 (339)
Q Consensus       221 ~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~~~~---------------~~~~~~~  279 (339)
                      ..|+.+|.+.+.+++.++.+   .++.+..+.|..+..|.....      ........               ...+...
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v  214 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeec
Confidence            68999999999998887554   578888899988887743211      11111111               1134458


Q ss_pred             HHHHHHHHHHhccCCCCCCCcceeeCCCC
Q 019551          280 EEGADTVLWLALQPKEKLVSGSFYFDRAE  308 (339)
Q Consensus       280 ~e~A~~v~~l~s~~~~~~~~G~~~~d~~~  308 (339)
                      +|+++++..++..+.    .+.|.+..++
T Consensus       215 ~d~~~~~~~~~~~~~----~~~~~~~~~~  239 (307)
T d1eq2a_         215 GDVADVNLWFLENGV----SGIFNLGTGR  239 (307)
T ss_dssp             HHHHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             ccHHHHHHHHhhhcc----cccccccccc
Confidence            899999988875432    3556664443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=1.9e-06  Score=69.66  Aligned_cols=86  Identities=23%  Similarity=0.261  Sum_probs=64.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++|+|+|.|+ ||.|++++..|.+.|. ++++++|++++.+++..................|+.+.+++.....    
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc----
Confidence            378999999999 7999999999999998 6999999988777654433221111234455678888888766554    


Q ss_pred             CCCCccEEEEccccc
Q 019551          137 KNKPVHVLVNNAGVL  151 (339)
Q Consensus       137 ~~~~id~lInnAG~~  151 (339)
                         ..|++||+..+.
T Consensus        90 ---~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ---SADILTNGTKVG  101 (182)
T ss_dssp             ---TCSEEEECSSTT
T ss_pred             ---ccceeccccCCc
Confidence               689999997643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.12  E-value=4.9e-06  Score=67.05  Aligned_cols=79  Identities=15%  Similarity=0.231  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+||+|.+.++-....|++|+.+++++++.+...+     .+ ....+   |..+++..+.+.+.  ....
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-----~G-a~~vi---~~~~~~~~~~~~~~--~~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-----IG-FDAAF---NYKTVNSLEEALKK--ASPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TT-CSEEE---ETTSCSCHHHHHHH--HCTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-----hh-hhhhc---ccccccHHHHHHHH--hhcC
Confidence            48999999999999999999999999999999999876544332     22 22222   33333333333222  2234


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            7999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.3e-05  Score=63.96  Aligned_cols=79  Identities=18%  Similarity=0.346  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+|++|...++.....|++|+++++++++.+.+.     ..+...+    .|.++.+-.+++.+..  ...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-----~~Ga~~v----i~~~~~~~~~~i~~~t--~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-----QNGAHEV----FNHREVNYIDKIKKYV--GEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HTTCSEE----EETTSTTHHHHHHHHH--CTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-----ccCcccc----cccccccHHHHhhhhh--ccC
Confidence            4889999999999999999988889999999999877654332     2233222    3666654433333322  224


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.02  E-value=1.4e-05  Score=62.79  Aligned_cols=84  Identities=20%  Similarity=0.322  Sum_probs=61.0

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++++++++|.|+ |++|+.+++.|...|+ +|.++.|+.++.++..+++    +   ...     .+.+++.+.+.    
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~----~---~~~-----~~~~~~~~~l~----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----G---GEA-----VRFDELVDHLA----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----T---CEE-----CCGGGHHHHHH----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh----h---ccc-----ccchhHHHHhc----
Confidence            378999999998 9999999999999998 6999999998887776654    2   111     12344444444    


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhh
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFE  163 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~  163 (339)
                         ..|++|++.+...  ..++.+.++
T Consensus        84 ---~~Divi~atss~~--~ii~~~~i~  105 (159)
T d1gpja2          84 ---RSDVVVSATAAPH--PVIHVDDVR  105 (159)
T ss_dssp             ---TCSEEEECCSSSS--CCBCHHHHH
T ss_pred             ---cCCEEEEecCCCC--ccccHhhhH
Confidence               6899999987433  334555544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.00  E-value=1.5e-05  Score=63.35  Aligned_cols=74  Identities=14%  Similarity=0.194  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +|.|+|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+++    +  .......+..+.......+.       .
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~--~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q--HSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----T--TEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----c--ccccccccccchhhhHhhhh-------c
Confidence            689999987 99999999999999999999999999877655432    2  34445556666666555543       4


Q ss_pred             ccEEEEcc
Q 019551          141 VHVLVNNA  148 (339)
Q Consensus       141 id~lInnA  148 (339)
                      .|.++...
T Consensus        68 ~~~~i~~~   75 (182)
T d1e5qa1          68 HDLVISLI   75 (182)
T ss_dssp             SSEEEECS
T ss_pred             cceeEeec
Confidence            56666544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.89  E-value=1.4e-05  Score=64.66  Aligned_cols=86  Identities=13%  Similarity=0.174  Sum_probs=56.0

Q ss_pred             CCEEEE-EcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH-hcCC
Q 019551           61 GKNCVV-TGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRF-SLKN  138 (339)
Q Consensus        61 ~k~vlI-TGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~  138 (339)
                      |++++| +||+||+|.+.++-....|++||.+.|+.++.++..+.+++.. ...+  +..|-.+..++.+.+.++ ....
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG-ad~v--i~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG-ATQV--ITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT-CSEE--EEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc-ccEE--EeccccchhHHHHHHHHHHhhcc
Confidence            555555 7999999999888877889999999999888777776666542 2222  222211222223333333 2345


Q ss_pred             CCccEEEEccc
Q 019551          139 KPVHVLVNNAG  149 (339)
Q Consensus       139 ~~id~lInnAG  149 (339)
                      +.+|+++++.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            67999999876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=2.6e-05  Score=62.31  Aligned_cols=80  Identities=16%  Similarity=0.264  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+||+|...++-....|++|+.+++++++.+.+.+ +    +...    ..|.++++-.+++ .++ ....
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l----Ga~~----vi~~~~~d~~~~v-~~~-t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GAWQ----VINYREEDLVERL-KEI-TGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TCSE----EEETTTSCHHHHH-HHH-TTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c----CCeE----EEECCCCCHHHHH-HHH-hCCC
Confidence            37899999999999999999888899999999999988655432 2    3222    1366664433333 222 1335


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|+++++.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            79999998874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=4e-05  Score=60.80  Aligned_cols=75  Identities=13%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++||.|+|.|+ ||.+++++..|.+.|.+|.++.|+.++.++..+.+....   .+..+  +..+.            ..
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~------------~~   77 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL------------EG   77 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG------------TT
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc------------cc
Confidence            67999999998 899999999999999999999999999888877765542   23322  22211            11


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ...|++||+..+.
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999997543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.81  E-value=2.3e-05  Score=62.79  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+|++|...++-+...|++|+++++++++.+.+    ++ .+...  +  .|..+++-.+++. +.. ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~-~Ga~~--v--i~~~~~~~~~~v~-~~t-~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-LGVEY--V--GDSRSVDFADEIL-ELT-DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-TCCSE--E--EETTCSTHHHHHH-HHT-TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----cc-ccccc--c--ccCCccCHHHHHH-HHh-CCC
Confidence            478999999999999999998888899999999987765432    22 23222  1  2445543333322 221 224


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999987

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.78  E-value=0.00019  Score=55.22  Aligned_cols=118  Identities=12%  Similarity=0.183  Sum_probs=75.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      |++.|.|+ |.+|..+|..|+.+|.  ++++.++++++++....++....  ..........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            66778895 8999999999999874  79999999988877766666432  12233333333   3322          


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                       ..-|++|..||.......-+-++-...++.|    ..+.+.+.+.+.+..+.+.++++|-
T Consensus        68 -~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             -ccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence             2579999999976532211111112234444    3566777777777767777777764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=1.9e-05  Score=53.75  Aligned_cols=42  Identities=29%  Similarity=0.331  Sum_probs=37.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      ++++++|+||+||+|....+-+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            478999999999999999998888999999999999886644

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.76  E-value=0.00033  Score=53.97  Aligned_cols=116  Identities=16%  Similarity=0.121  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .++++.|.|| |.+|..+|..|+.+|.  +|+++|+++++++....++.....  ...+.+...|.   +++        
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~l--------   72 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DDC--------   72 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GGT--------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HHh--------
Confidence            4678888897 9999999999999875  799999999888777777765321  22333333333   221        


Q ss_pred             cCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          136 LKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       136 ~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                         ..-|++|.+||........    -.+.+..|    .-+.+.+.+.+.+..+.+.++++|-
T Consensus        73 ---~daDvvvitag~~~~~~~~----R~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          73 ---RDADLVVICAGANQKPGET----RLDLVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             ---TTCSEEEECCSCCCCTTTC----SGGGHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             ---ccceeEEEecccccccCcc----hhHHHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence               2579999999976533222    12223444    3455666666666666787777764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.75  E-value=0.00012  Score=57.70  Aligned_cols=82  Identities=26%  Similarity=0.306  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC-C
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK-N  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  138 (339)
                      .|.+|+|+| +|+||...++.+...|++|+++++++++++.+.+     .+. ...+ ..|-. .++.....+.+.+. .
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-----~ga-~~~~-~~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-----CGA-DVTL-VVDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----TTC-SEEE-ECCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-----cCC-cEEE-ecccc-ccccchhhhhhhcccc
Confidence            478999997 5899999999888899999999999988664432     222 2222 22222 12233334444443 3


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            468999999984

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.71  E-value=0.00025  Score=54.54  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +.+++.|.|+ |.+|..+|..|+.+|  .+|+++|+++++++....++..... .........|.   +++         
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~~---------   70 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SDC---------   70 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HHh---------
Confidence            3567888896 999999999999988  4899999999887766666654211 12233444443   221         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ..-|++|.+||......    +.-.+.+..|.    .+.+...+.+.+....+.++++|-
T Consensus        71 --~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          71 --KDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             --TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --ccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeCC
Confidence              25799999999755322    12223344453    455666666766656777777663

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.70  E-value=8.8e-05  Score=59.33  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC--CHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS--SITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  136 (339)
                      .|.+|+|+|+ |+||...++.+...|+ +|+++++++++++.+ +++    +. .. ++  |..  +..+..+.+.+...
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga-~~-vi--~~~~~~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI----GA-DL-TL--NRRETSVEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT----TC-SE-EE--ETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc----cc-eE-EE--eccccchHHHHHHHHHhhC
Confidence            4899999997 8999999999999998 799999999877543 222    22 22 22  333  22333222222221


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                       ...+|++|.++|.
T Consensus        98 -~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 -GRGADFILEATGD  110 (182)
T ss_dssp             -TSCEEEEEECSSC
T ss_pred             -CCCceEEeecCCc
Confidence             2359999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.69  E-value=0.0001  Score=58.40  Aligned_cols=76  Identities=12%  Similarity=0.103  Sum_probs=57.9

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.+++++..+.+....   .+.....|-.              ..
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGGGC--------------CC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc---ccchhhhccc--------------cc
Confidence            67899999987 899999999999988899999999999988888776432   3444443311              12


Q ss_pred             CCccEEEEcccccc
Q 019551          139 KPVHVLVNNAGVLE  152 (339)
Q Consensus       139 ~~id~lInnAG~~~  152 (339)
                      ...|++||+.....
T Consensus        78 ~~~diiIN~tp~g~   91 (171)
T d1p77a1          78 QTYDLVINATSAGL   91 (171)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             cccceeeecccccc
Confidence            47899999976554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.66  E-value=6.5e-05  Score=56.84  Aligned_cols=71  Identities=15%  Similarity=0.292  Sum_probs=55.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++|.|+ |.+|+.+|+.|.+.|+.|++++++++..++..+++       ...++..|.++++.++++-      ....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~~~l~~~~------i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDAG------IEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHTT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccchhhhhhcC------hhhhh
Confidence            5889998 99999999999999999999999998877654431       3567889999999776541      13567


Q ss_pred             EEEEc
Q 019551          143 VLVNN  147 (339)
Q Consensus       143 ~lInn  147 (339)
                      .++..
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             hhccc
Confidence            77653

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.66  E-value=2.5e-05  Score=62.43  Aligned_cols=103  Identities=19%  Similarity=0.183  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|||+||+||+|....+-....|++|+.+++++++.+.+.+     .+. ...+   |-.+.  ..+...  ....+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-----lGa-~~vi---~~~~~--~~~~~~--~~~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----LGA-KEVL---AREDV--MAERIR--PLDKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----TTC-SEEE---ECC-------------CCSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-----ccc-ceee---ecchh--HHHHHH--Hhhcc
Confidence            48899999999999999888888899999999999888654432     222 2222   32221  122221  11335


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCcccc
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMY  202 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~  202 (339)
                      ++|+++.+.|-..         +..               .+..|+   .+|+++.++...+.
T Consensus        98 gvD~vid~vgg~~---------~~~---------------~l~~l~---~~Griv~~G~~~g~  133 (176)
T d1xa0a2          98 RWAAAVDPVGGRT---------LAT---------------VLSRMR---YGGAVAVSGLTGGA  133 (176)
T ss_dssp             CEEEEEECSTTTT---------HHH---------------HHHTEE---EEEEEEECSCCSSS
T ss_pred             CcCEEEEcCCchh---------HHH---------------HHHHhC---CCceEEEeecccCc
Confidence            7999999987432         221               222333   46999999887655

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.63  E-value=7.3e-05  Score=59.28  Aligned_cols=74  Identities=19%  Similarity=0.261  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|+||+|++|...++.+...|++|+.+++++++.+.+.+     .+...+    .|..+.  .    +++.. ..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-----lGa~~~----i~~~~~--~----~~~~~-~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-----LGAEEA----ATYAEV--P----ERAKA-WG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-----TTCSEE----EEGGGH--H----HHHHH-TT
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-----ccccee----eehhhh--h----hhhhc-cc
Confidence            48899999999999999999888899999999999877654432     222222    233321  1    12222 34


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++++.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            6999999876

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.60  E-value=0.00072  Score=51.68  Aligned_cols=115  Identities=20%  Similarity=0.221  Sum_probs=70.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++.|+||+|.+|.++|..|+.+|.  ++++++.++.+.+.  ..+.....-.......    ...+..+.++       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~~----~~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeEE----cCCChHHHhC-------C
Confidence            578999999999999999999986  69999988754433  3333221111111111    1222222222       6


Q ss_pred             ccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          141 VHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       141 id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      -|++|..||....... +   -.+.++.|..    ..+.+.+.+.+..+.+.|+.+|.
T Consensus        69 aDivVitag~~~~~g~-s---R~~ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          69 CDVVVIPAGVPRKPGM-T---RDDLFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             CSEEEECCSCCCCTTC-C---GGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCEEEECCCcCCCCCC-C---cchHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            8999999997543321 2   2334555654    44666666666656788888775

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.55  E-value=0.0014  Score=50.83  Aligned_cols=117  Identities=17%  Similarity=0.206  Sum_probs=78.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +..+++.|.|+ |.+|.++|..|+.+|.  +++++|++++..+....++....  ..........|.   +++       
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~~-------   86 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SVT-------   86 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GGG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hhc-------
Confidence            45678888896 9999999999999986  79999999988877776665421  122232233333   322       


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                          ..-|++|..||...... .+.   .+.+..|    ..+.+.+.+.+.+....+.++++|-
T Consensus        87 ----~~adiVVitAg~~~~~g-~tR---~~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 ----ANSKIVVVTAGVRQQEG-ESR---LNLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ----TTCSEEEECCSCCCCTT-CCG---GGGHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ----ccccEEEEecCCccccC-cch---HHHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                26799999999765322 222   2334444    3466777788877767788888774

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.00076  Score=52.39  Aligned_cols=117  Identities=17%  Similarity=0.181  Sum_probs=76.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHH
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++..++.|.|+ |.+|..+|..|+.+|.  +++++|+++++++....++.....  .........|.   +++       
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~~-------   85 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NVS-------   85 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GGG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hhh-------
Confidence            34456778896 9999999999999976  799999999888777777764321  12233333333   221       


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                          ..-|++|..||..........    +.++.|.    .+.+.+.+.+.+....+.++++|.
T Consensus        86 ----~~adivvitag~~~~~~~~R~----dll~~N~----~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          86 ----ANSKLVIITAGARMVSGQTRL----DLLQRNV----AIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ----TTEEEEEECCSCCCCTTTCSS----CTTHHHH----HHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ----ccccEEEEecccccCCCCCHH----HHHHHHH----HHHHHHHHHHhccCCCeEEEEeCC
Confidence                268999999997654332211    2234443    345666677776667788888774

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00061  Score=53.56  Aligned_cols=81  Identities=22%  Similarity=0.151  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+. +    .+. . +++..+-.+..+..+.++.-  ..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~----~Ga-~-~~~~~~~~~~~~~~~~~~~~--~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E----IGA-D-LVLQISKESPQEIARKVEGQ--LG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H----TTC-S-EEEECSSCCHHHHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-H----hCC-c-cccccccccccccccccccc--CC
Confidence            3789999987 9999999999999999 7999999988776442 2    222 2 22333334444444433332  23


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            478999999984

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00021  Score=59.09  Aligned_cols=81  Identities=21%  Similarity=0.277  Sum_probs=56.9

Q ss_pred             cccCCCEEEEEcC----------------CCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEecc
Q 019551           57 ARIEGKNCVVTGA----------------NAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCD  120 (339)
Q Consensus        57 ~~l~~k~vlITGa----------------s~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  120 (339)
                      .+|+|++||||+|                ||..|.++|+++..+|++|.++.-....          . +...+..+  .
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~-~p~~~~~~--~   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------P-TPPFVKRV--D   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------C-CCTTEEEE--E
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------C-cccccccc--e
Confidence            3688999999987                4679999999999999999988754321          1 11234433  4


Q ss_pred             CCCHHHHHHHHHHHhcCCCCccEEEEccccccC
Q 019551          121 LSSITEIKSFANRFSLKNKPVHVLVNNAGVLEN  153 (339)
Q Consensus       121 l~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~  153 (339)
                      +.+.+++.+.+.+..   ...|++|++|++...
T Consensus        69 ~~t~~~m~~~~~~~~---~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAAVNASV---QQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHG---GGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHHHHhhh---ccceeEeeeechhhh
Confidence            455666665554433   357999999998653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.43  E-value=0.00075  Score=52.20  Aligned_cols=122  Identities=17%  Similarity=0.096  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +.+++.|.|+ |.+|..+|..++..|. ++++++.++++++.....+.....  +........  ++.+   +..     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~---~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchh---hhh-----
Confidence            3567888897 9999999999988885 899999999887777666654211  111111111  1222   111     


Q ss_pred             CCCCccEEEEccccccCCCCCC-hhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          137 KNKPVHVLVNNAGVLENNRLIT-SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                        ..-|++|..||........+ ...-...+..|.    .+++.+.+.+.+..+.+.++++|.
T Consensus        75 --~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~----~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 --TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             --cCCCeEEEecccccCCCCCCcccchhhhhhhhH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence              26899999999875433211 112223344443    455666666777666777777764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.41  E-value=0.00034  Score=55.04  Aligned_cols=80  Identities=19%  Similarity=0.202  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+++|.|++|++|..+++.+...|+ +|+++++++++.+.+.+     .+ ... .  .|.++.+..++..+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-----~G-a~~-~--i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-----AG-ADY-V--INASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-----HT-CSE-E--EETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-----cC-Cce-e--eccCCcCHHHHHHHHh--hc
Confidence            478999999999999999999988885 89999999877554432     22 222 2  2444444444433322  23


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            469999999874

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.39  E-value=0.0011  Score=50.38  Aligned_cols=113  Identities=21%  Similarity=0.241  Sum_probs=73.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|.|+ |.+|..+|..++.+|.  ++++.|+++++++....++....+ .........|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            3567797 8999999999998874  799999999888776666654321 1233333333   3222           2


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      .-|++|.+||....... +   -.+.+..|    ..+.+.+.+.+.+..+.+.++++|-
T Consensus        67 ~adivvitag~~~~~g~-~---r~dl~~~N----~~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPGE-T---RLQLLGRN----ARVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCSSC-C---HHHHHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCCCc-c---hhhhhccc----cchHHHHHHHHHhcCCCcEEEEeCC
Confidence            57999999997654321 1   12234444    3466777788877767787777663

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.37  E-value=0.0016  Score=49.43  Aligned_cols=114  Identities=18%  Similarity=0.152  Sum_probs=73.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecC--chhHHHHHHHHHhhcC-CccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRS--KEKGETALSAIRSKTG-NENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~--~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++.|+||+|.+|.++|..+..+|.  ++++.+.+  ++.++....++....+ .....+...|.   +++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---EDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HHh----------
Confidence            578999999999999999999986  69999964  3444444445543211 23344444333   321          


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                       ..-|++|..||...... .   +-.+.++.|.    -+.+.+.+.+.+..+.+.++.+|-
T Consensus        69 -~~aDiVvitaG~~~~~g-~---~R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          69 -AGSDVVVITAGIPRQPG-Q---TRIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             -TTCSEEEECCCCCCCTT-C---CHHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             -hhcCEEEEecccccccC-C---chhhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence             26899999999754322 2   2233455553    466777777877766777777753

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=0.00017  Score=57.89  Aligned_cols=78  Identities=19%  Similarity=0.216  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEE-EEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATV-YMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~V-vl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +++|||+||+||+|...++-....|+++ +.+++++++..+...++    +. ..   ..|..+++ +.+.++++.  ..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~----ga-d~---vi~~~~~~-~~~~~~~~~--~~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL----GF-DA---AVNYKTGN-VAEQLREAC--PG   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS----CC-SE---EEETTSSC-HHHHHHHHC--TT
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc----cc-eE---Eeeccchh-HHHHHHHHh--cc
Confidence            5899999999999999888877799964 45566666555444333    22 21   13555433 333333333  24


Q ss_pred             CccEEEEccc
Q 019551          140 PVHVLVNNAG  149 (339)
Q Consensus       140 ~id~lInnAG  149 (339)
                      .+|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999987

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.32  E-value=0.0029  Score=48.10  Aligned_cols=113  Identities=20%  Similarity=0.185  Sum_probs=71.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh--cCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSK--TGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|.|+ |.+|.++|..++.+|.  +++++++++++++....++...  +..........|   .+++           
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~---~~~~-----------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD---PEIC-----------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC---GGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC---HHHh-----------
Confidence            4667797 9999999999999986  7999999998877666666542  111112112222   2222           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..||...... .+.   .+.+..|.    .+.+.+.+.+.+..+.+.++++|-
T Consensus        68 ~daDvVVitaG~~~~~g-~~R---~dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQKPG-QSR---LELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             hCCcEEEEecccccCCC-Cch---hhhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence            15799999999765322 222   23344454    455666677777656777777663

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.32  E-value=0.00013  Score=58.19  Aligned_cols=80  Identities=25%  Similarity=0.313  Sum_probs=56.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.++..+.+...........+  ++.+          +...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~~~----------~~~~   80 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KFSG----------LDVD   80 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EEEC----------TTCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hhhh----------hhhc
Confidence            478999999988 789999999998777 9999999999999988888765432211000  1111          1112


Q ss_pred             CCCccEEEEccccc
Q 019551          138 NKPVHVLVNNAGVL  151 (339)
Q Consensus       138 ~~~id~lInnAG~~  151 (339)
                      ....|++||+....
T Consensus        81 ~~~~dliIn~tp~g   94 (177)
T d1nvta1          81 LDGVDIIINATPIG   94 (177)
T ss_dssp             CTTCCEEEECSCTT
T ss_pred             cchhhhhccCCccc
Confidence            24689999997654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.31  E-value=0.003  Score=48.14  Aligned_cols=115  Identities=16%  Similarity=0.174  Sum_probs=67.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCch--hHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKE--KGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~--~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.|.||+|.+|.++|..|+.+|.  ++++++++++  +++....++.....  ...+.....--.+.+.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l---------   72 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII---------   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh---------
Confidence            478999999999999999999984  8999998863  34444555554221  11222211111122222         


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVS  197 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vs  197 (339)
                        ..-|++|.+||...... .+   -...++.|..    +.+.+.+.+.+..+ ..|+.+|
T Consensus        73 --~~aDvVVitAG~~~~~g-~s---R~dl~~~Na~----iv~~i~~~i~~~~~-~~iivVt  122 (145)
T d1hyea1          73 --DESDVVIITSGVPRKEG-MS---RMDLAKTNAK----IVGKYAKKIAEICD-TKIFVIT  122 (145)
T ss_dssp             --TTCSEEEECCSCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHHCC-CEEEECS
T ss_pred             --ccceEEEEecccccCCC-CC---hhhhhhhhHH----HHHHHHHHHhccCC-CeEEEEc
Confidence              26899999999754322 12   2234555543    45666666655533 4455453

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.25  E-value=0.0011  Score=50.39  Aligned_cols=113  Identities=20%  Similarity=0.149  Sum_probs=66.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-ccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTGN-ENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|.|+ |.+|..+|..++.+|.  +++++|+++++++....++.....- ........   +.+++           .
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~~-----------~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSDV-----------K   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGGG-----------T
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHHh-----------C
Confidence            4556687 9999999999999876  7999999998776666666543221 12222222   22221           2


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      .-|++|..||......    +.-...+..|.    .+.+.+.+.+.+..+.+.++++|-
T Consensus        68 ~adivvitag~~~~~~----~~r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPG----ETRLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCceEEEecccccCcC----cchhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            5799999999765322    12223344444    456666777777656777777653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.0055  Score=46.57  Aligned_cols=115  Identities=19%  Similarity=0.175  Sum_probs=71.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-C--CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           63 NCVVTGANAGIGYATAEGLAS-R--GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~-~--G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      ++.|+|++|.+|.++|..|+. .  +.++++.+..+ ..+....++...........+ .+-.+.+.++           
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~~~-----------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPALE-----------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHHHT-----------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCccccC-----------
Confidence            578999999999999998864 3  46899999864 455555556543221222222 2333443321           


Q ss_pred             CccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          140 PVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       140 ~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      .-|++|..||......    ++-.+.+..|..    +.+.+.+.+.+..+.+.++++|.
T Consensus        69 ~aDvvvitaG~~~k~g----~~R~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKPG----MDRSDLFNVNAG----IVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCTT----CCGGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCEEEECCCccCCCC----cchhhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccC
Confidence            5799999999864322    222334556643    45556666666656777777775

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.25  E-value=0.00073  Score=51.53  Aligned_cols=114  Identities=16%  Similarity=0.160  Sum_probs=70.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRG--ATVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G--~~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|+|| |.+|.++|..|+..|  .++++.|+++++++.....+....  ......+...  .+.+++           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------
Confidence            3667796 999999999999998  489999999988776655553321  1122333222  223222           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|.+||........    -...++.|.    .+.+.+.+.+.+..+.+.++++|-
T Consensus        68 ~dadvvvitag~~~~~g~~----r~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPGMT----REDLLMKNA----GIVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTTCC----HHHHHHHHH----HHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCCCc----hHHHHHHHH----HHHHHHHHHhhccCCCeEEEEecC
Confidence            2679999999976533221    122233443    345566666666656777777653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.24  E-value=0.0012  Score=50.67  Aligned_cols=119  Identities=15%  Similarity=0.145  Sum_probs=75.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .++.|.|+ |++|.++|..+...+. ++++.|+++++++....++....  ...+..+...|  +.+++           
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~-----------   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL-----------   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc-----------
Confidence            35777796 9999999998888875 79999999988877766665431  11233333221  22222           


Q ss_pred             CCccEEEEccccccCCCCCC-hhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLIT-SEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|.+||........+ ...-...+..|.    -+.+.+.+.+.+..+.+.++++|-
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            26799999999765433221 112233455554    456667777777666777777764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.23  E-value=0.00012  Score=57.65  Aligned_cols=43  Identities=28%  Similarity=0.356  Sum_probs=37.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      .+++|||+||+||+|...++-....|++|+.+++++++.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            3668999999999999988877778999999999998866543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.23  E-value=0.0012  Score=51.68  Aligned_cols=77  Identities=23%  Similarity=0.294  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+.+ +    +. ...+   |..+..+.   .+   ...+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l----Ga-~~~i---~~~~~~~~---~~---~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M----GA-DHYI---ATLEEGDW---GE---KYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TC-SEEE---EGGGTSCH---HH---HSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c----CC-cEEe---eccchHHH---HH---hhhc
Confidence            4889999987 899999888777889999999999988765432 2    22 2222   22221111   11   2235


Q ss_pred             CccEEEEcccccc
Q 019551          140 PVHVLVNNAGVLE  152 (339)
Q Consensus       140 ~id~lInnAG~~~  152 (339)
                      ..|.+|.+.|...
T Consensus        91 ~~d~vi~~~~~~~  103 (168)
T d1piwa2          91 TFDLIVVCASSLT  103 (168)
T ss_dssp             CEEEEEECCSCST
T ss_pred             ccceEEEEecCCc
Confidence            7899999877543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.21  E-value=0.00053  Score=52.36  Aligned_cols=115  Identities=18%  Similarity=0.197  Sum_probs=70.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT--GNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      |++.|.|+ |.+|.++|..|+.++. ++++++.++++.+.....+....  ......+..+  .|.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            46677796 9999999999998875 89999999988776666654321  0111222211  122222           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|.+||........    -.+.+..|.    .+.+.+.+.+.+..+.+.++++|-
T Consensus        68 ~~advvvitag~~~~~~~~----r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKPGMS----REDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCcCcc----hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            2579999999976533221    223344443    477788888888767787777653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.21  E-value=0.00053  Score=54.18  Aligned_cols=81  Identities=25%  Similarity=0.323  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+...+     .+.. ..+...|-  .+.+.+..+..  ..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----~Ga~-~~i~~~~~--~~~~~~~~~~~--~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----VGAT-ECVNPQDY--KKPIQEVLTEM--SN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----TTCS-EEECGGGC--SSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----hCCe-eEEecCCc--hhHHHHHHHHH--hc
Confidence            4889999999 7899999999999986 89999999988664432     2222 11111121  22334433333  23


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      +.+|++|.+.|..
T Consensus        97 ~G~D~vid~~G~~  109 (176)
T d2jhfa2          97 GGVDFSFEVIGRL  109 (176)
T ss_dssp             SCBSEEEECSCCH
T ss_pred             CCCCEEEecCCch
Confidence            4799999998854

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00021  Score=56.89  Aligned_cols=42  Identities=29%  Similarity=0.331  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .++++||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            356899999999999998888888999999999999886544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.17  E-value=0.00041  Score=54.91  Aligned_cols=79  Identities=20%  Similarity=0.214  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ ||||...++.+...|+ +|+++++++++++.+. ++    +..  ++  +|..+.+..+++.+ .. ..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l----Ga~--~~--i~~~~~~~~~~v~~-~t-~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY----GAT--DI--LNYKNGHIEDQVMK-LT-NG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH----TCS--EE--ECGGGSCHHHHHHH-HT-TT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh----Ccc--cc--ccccchhHHHHHHH-Hh-hc
Confidence            4788999987 8999999998888998 7999999988765443 22    221  12  34444333333222 22 12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.001  Score=52.09  Aligned_cols=74  Identities=26%  Similarity=0.354  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|++|+|.|+ |+||...++.+...|++++++++++++.+.+ +++    +...+    .|..+.+...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l----Gad~~----i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL----GADEV----VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH----TCSEE----EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc----CCcEE----EECchhhHHH-------HhcC
Confidence            4889999986 8999999988888999999999998876533 333    22211    3555554322       2224


Q ss_pred             CccEEEEcccc
Q 019551          140 PVHVLVNNAGV  150 (339)
Q Consensus       140 ~id~lInnAG~  150 (339)
                      .+|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.12  E-value=0.0018  Score=51.16  Aligned_cols=81  Identities=26%  Similarity=0.354  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+.+     .+. ...+-.-|-.+.  .+...+..  ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----~GA-~~~in~~~~~~~--~~~~~~~~--~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----VGA-TECISPKDSTKP--ISEVLSEM--TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----HTC-SEEECGGGCSSC--HHHHHHHH--HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----cCC-cEEECccccchH--HHHHHHHh--cc
Confidence            4889999987 9999999999999995 89999999998775443     222 222222222221  22222221  23


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      +.+|++|.+.|..
T Consensus        98 ~G~d~vi~~~g~~  110 (176)
T d1d1ta2          98 NNVGYTFEVIGHL  110 (176)
T ss_dssp             SCCCEEEECSCCH
T ss_pred             ccceEEEEeCCch
Confidence            4699999998754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.12  E-value=0.0019  Score=50.19  Aligned_cols=82  Identities=21%  Similarity=0.176  Sum_probs=55.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH--------hhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR--------SKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      +.|.|+ |-+|.++|+.|.++|++|++.+|+++..++..+.-.        +...+.++.++.+   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            566666 999999999999999999999999887776544210        1112234444443   3567788888887


Q ss_pred             cCCCCccEEEEccc
Q 019551          136 LKNKPVHVLVNNAG  149 (339)
Q Consensus       136 ~~~~~id~lInnAG  149 (339)
                      ....+=.++++.++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            66555556666543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.11  E-value=0.0067  Score=47.64  Aligned_cols=116  Identities=15%  Similarity=0.031  Sum_probs=66.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC---CC----EEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASR---GA----TVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~---G~----~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      -+|.||||+|.||..++..|++.   |.    .+.+.+...  +.++....++..... .....+..- ++..   +.  
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~~-~~~~---~~--   97 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIG-IDPY---EV--   97 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEE-SCHH---HH--
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCcccc-ccch---hh--
Confidence            36999999999999999999975   32    455666544  344444445543321 112211111 2222   11  


Q ss_pred             HHhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEc
Q 019551          133 RFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVS  197 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vs  197 (339)
                           +...|++|..+|......    +..++.+..|.    .+.+...+.+.+..+ ...|+.++
T Consensus        98 -----~~~aDvVvi~ag~~rkpg----~tR~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          98 -----FEDVDWALLIGAKPRGPG----MERAALLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -----TTTCSEEEECCCCCCCTT----CCHHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -----ccCCceEEEeeccCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence                 137899999999865332    23344455553    445666666666433 45566664

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.11  E-value=0.00034  Score=52.66  Aligned_cols=72  Identities=19%  Similarity=0.215  Sum_probs=52.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |.++|.|+ |-+|+.+|+.|.+.|+.|++++.+++..++..    ..    ....+.+|.++++.++++-  +    ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~----~~~~~~gd~~~~~~l~~a~--i----~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSLG--I----RNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT----CSEEEECCTTCTTHHHHHT--G----GGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh----CCcceeeecccchhhhccC--C----ccc
Confidence            45677777 89999999999999999999999988766542    22    2345668999998776641  1    245


Q ss_pred             cEEEEcc
Q 019551          142 HVLVNNA  148 (339)
Q Consensus       142 d~lInnA  148 (339)
                      |.+|-..
T Consensus        66 ~~vi~~~   72 (134)
T d2hmva1          66 EYVIVAI   72 (134)
T ss_dssp             SEEEECC
T ss_pred             cEEEEEc
Confidence            7766544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.09  E-value=0.0015  Score=49.64  Aligned_cols=114  Identities=13%  Similarity=0.126  Sum_probs=71.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRSKTG--NENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ++.|.|+ |.+|.++|..++.+|.  +++++|+++++++....++....+  .....+...  .|.+++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh-----------
Confidence            4567786 9999999999998875  699999999887776666654321  112222221  122322           


Q ss_pred             CCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          139 KPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       139 ~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                      ..-|++|..||....... +   -.+.+..|    ....+...+.+.+..+.+.++++|-
T Consensus        68 ~~adiVvitag~~~~~g~-~---r~~l~~~n----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPGM-T---RLDLAHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             TTCSEEEECCCCCCCSSC-C---HHHHHHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             ccccEEEEeccccCCCCC-c---hHHHHHHh----hHHHHHHHHHHHhhCCCcEEEEecC
Confidence            257999999997553321 2   22233333    3455666777777656777777664

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.99  E-value=0.0038  Score=47.98  Aligned_cols=115  Identities=16%  Similarity=0.085  Sum_probs=67.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC---------EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA---------TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~---------~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +|.|+||+|.+|..++..|+..+.         +++..+++.++++....++..... .....+...-.+.+.+      
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------   78 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKVAF------   78 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHT------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhhhc------
Confidence            799999999999999999998653         233444555666655555544322 2233333322222222      


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVS  197 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vs  197 (339)
                           ...|++|..||...... .+.   ++.+..|+    ...+.+.+.+.+..+ .+.|+.+|
T Consensus        79 -----~~advViitaG~~~~pg-~~r---~dl~~~N~----~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 -----KDADYALLVGAAPRKAG-MER---RDLLQVNG----KIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             -----TTCSEEEECCCCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -----ccccEEEeecCcCCCCC-CcH---HHHHHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence                 37899999999865322 222   23344443    455666666666433 46666665

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.98  E-value=0.0018  Score=50.44  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++|+|.|+ |++|...++.+...|++|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4789999886 9999999988888999999999998876543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.98  E-value=0.0013  Score=51.73  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ |+||...++.+...|++ |+++++++++++.+. ++    +...  +  .|..+.+ +.+.+.++  ..
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~----Ga~~--~--i~~~~~~-~~~~i~~~--t~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL----GATH--V--INSKTQD-PVAAIKEI--TD   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH----TCSE--E--EETTTSC-HHHHHHHH--TT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc----CCeE--E--EeCCCcC-HHHHHHHH--cC
Confidence            4789999997 89999999888888985 556677777655443 22    3222  2  3444433 33333333  23


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +.+|++|.+.|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            579999999984

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.93  E-value=0.0049  Score=48.33  Aligned_cols=42  Identities=24%  Similarity=0.154  Sum_probs=37.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS  103 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~  103 (339)
                      .|++.|.|| |.+|.++|..|+++|++|.+.+|++++.+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            378899998 999999999999999999999999887766543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0015  Score=51.29  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCC-CHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLS-SITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~  137 (339)
                      .|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++++.+. ++    +...  ++  |.. +.+.+.+..+..  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~l----Ga~~--~i--~~~~~~~~~~~~~~~~--~   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF----GATE--CI--NPQDFSKPIQEVLIEM--T   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH----TCSE--EE--CGGGCSSCHHHHHHHH--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-Hh----CCcE--EE--eCCchhhHHHHHHHHH--c
Confidence            4889999998 5999999999998997 6777888887755332 32    3222  22  222 123344444433  2


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+.+|++|.+.|.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence            3479999999884

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.85  E-value=0.00042  Score=55.24  Aligned_cols=39  Identities=31%  Similarity=0.381  Sum_probs=35.0

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..+|++.
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            3488999999998 66999999999999999999998754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.85  E-value=0.002  Score=50.81  Aligned_cols=79  Identities=19%  Similarity=0.249  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC-HHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS-ITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  137 (339)
                      .|.+|+|.|+ ||||...++.+...|+ +|+++++++++++...     +.+...  ++  |..+ .+.++...+...  
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-----~~Ga~~--~i--~~~~~~~~~~~~~~~~~--   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-----ALGATD--CL--NPRELDKPVQDVITELT--   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----HTTCSE--EE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-----HhCCCc--cc--CCccchhhhhhhHhhhh--
Confidence            4789999975 9999999999999998 6888899988765332     233222  22  2221 122333333322  


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+.+|++|.++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3479999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.82  E-value=0.003  Score=48.29  Aligned_cols=80  Identities=15%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      -|++.|.||.|-+|..+|+.|.++|++|.+.+|+.+...+...      .+....+...+   ...+...+.++.....+
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~------~~~~~v~~~~~---~~~~~~v~~~~~~~~~~   79 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL------ANADVVIVSVP---INLTLETIERLKPYLTE   79 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH------TTCSEEEECSC---GGGHHHHHHHHGGGCCT
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh------hhccccccccc---hhhheeeeecccccccC
Confidence            3689999999999999999999999999999998765443221      12344444443   34555666666554333


Q ss_pred             ccEEEEccc
Q 019551          141 VHVLVNNAG  149 (339)
Q Consensus       141 id~lInnAG  149 (339)
                      =.+++..+.
T Consensus        80 ~~iiiD~~S   88 (152)
T d2pv7a2          80 NMLLADLTS   88 (152)
T ss_dssp             TSEEEECCS
T ss_pred             CceEEEecc
Confidence            234554443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0032  Score=48.27  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=57.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCcc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVH  142 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  142 (339)
                      +++|.|. +-+|+.+++.|.++|.+|++++.++++..+..++...    ..+.++.+|.++++.++++--      ...|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~~~L~~a~i------~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGI------DRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTT------TTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcchHHHHHhcc------ccCC
Confidence            5778887 7999999999999999999999998876666555542    357888999999987765421      3567


Q ss_pred             EEEEcc
Q 019551          143 VLVNNA  148 (339)
Q Consensus       143 ~lInnA  148 (339)
                      .+|...
T Consensus        74 ~vi~~~   79 (153)
T d1id1a_          74 AILALS   79 (153)
T ss_dssp             EEEECS
T ss_pred             EEEEcc
Confidence            777554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.70  E-value=0.0039  Score=48.77  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+.+     .+..  +++  |.. .+.++...+..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-----~ga~--~~i--~~~-~~~~~~~~~~~--~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-----LGAD--HVV--DAR-RDPVKQVMELT--RG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-----TTCS--EEE--ETT-SCHHHHHHHHT--TT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-----cccc--eee--cCc-ccHHHHHHHhh--CC
Confidence            3789999986 9999999988888886 67788888876554432     2222  222  333 23344433321  22


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ..+|++|.++|..
T Consensus        99 ~g~d~vid~~g~~  111 (172)
T d1h2ba2          99 RGVNVAMDFVGSQ  111 (172)
T ss_dssp             CCEEEEEESSCCH
T ss_pred             CCceEEEEecCcc
Confidence            4699999999843

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.67  E-value=0.00084  Score=47.12  Aligned_cols=38  Identities=24%  Similarity=0.319  Sum_probs=34.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            478999999998 77899999999999999999998654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.0035  Score=48.63  Aligned_cols=41  Identities=27%  Similarity=0.284  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      .|++++|.|+ |+||...++.+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            3789999875 9999999988889999999999998886644

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.63  E-value=0.0056  Score=47.99  Aligned_cols=79  Identities=25%  Similarity=0.337  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHH-HHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSIT-EIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  137 (339)
                      .|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+.+     .+...  +  .|.++.+ .+.+.....  .
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----lGa~~--~--i~~~~~d~~~~~~~~~~--~   94 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----LGATE--C--LNPKDYDKPIYEVICEK--T   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----TTCSE--E--ECGGGCSSCHHHHHHHH--T
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----cCCcE--E--EcCCCchhHHHHHHHHh--c
Confidence            4889999986 8999999999999997 79999999988765532     23222  2  2333222 122222222  3


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+..|++|-++|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            3579999999875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.62  E-value=0.0024  Score=51.29  Aligned_cols=81  Identities=19%  Similarity=0.116  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.     ..+ .. ++  .|-.+. ++.+.+.++. ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-----~~G-a~-~~--~~~~~~-~~~~~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-----AQG-FE-IA--DLSLDT-PLHEQIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HTT-CE-EE--ETTSSS-CHHHHHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-----hcc-cc-EE--EeCCCc-CHHHHHHHHh-CC
Confidence            4889999987 8999888888877887 7999999988765443     222 22 11  233333 3333333332 33


Q ss_pred             CCccEEEEcccccc
Q 019551          139 KPVHVLVNNAGVLE  152 (339)
Q Consensus       139 ~~id~lInnAG~~~  152 (339)
                      ...|++|.+.|...
T Consensus        93 ~g~D~vid~vG~~~  106 (195)
T d1kola2          93 PEVDCAVDAVGFEA  106 (195)
T ss_dssp             SCEEEEEECCCTTC
T ss_pred             CCcEEEEECccccc
Confidence            46999999998543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.60  E-value=0.0015  Score=51.15  Aligned_cols=45  Identities=16%  Similarity=0.324  Sum_probs=38.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l  105 (339)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.++..+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4678999988 9999999999999997 7999999998877765543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0031  Score=52.48  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=60.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEEE
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHLE  117 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  117 (339)
                      ++++++|+|.|+ ||+|..++..|+..|. ++.++|.+                   ..|.+.+.+.+.+..+...+..+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            578899999996 8999999999999998 78998863                   34777778888888777777766


Q ss_pred             eccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          118 LCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       118 ~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      ...+.+ +.......       ..|++|.+.
T Consensus       106 ~~~~~~-~~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         106 NALLDD-AELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECC
T ss_pred             hhhhhh-cccccccc-------ccceeeecc
Confidence            554443 33333332       567887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.52  E-value=0.00064  Score=54.99  Aligned_cols=43  Identities=23%  Similarity=0.307  Sum_probs=37.6

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      +++||+|+|-| .|.+|..+|+.|.+.|++|++.+.+.+.+...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            48899999998 58899999999999999999999987765543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.51  E-value=0.0045  Score=44.85  Aligned_cols=39  Identities=15%  Similarity=0.321  Sum_probs=34.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+++||+++|.|+ |.+|..-|+.|.+.|++|++++....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3589999999999 67999999999999999999987654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.46  E-value=0.0082  Score=47.04  Aligned_cols=84  Identities=13%  Similarity=0.126  Sum_probs=57.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH---------------HhhcCCccEEEEeccCCCHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI---------------RSKTGNENVHLELCDLSSITE  126 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l---------------~~~~~~~~~~~~~~Dl~~~~~  126 (339)
                      +.+-|.|- |-+|.++|++|+++|++|++.+|++++.++..++-               .+...  ....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~--~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK--KPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC--SSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc--ccceEEEecCchHH
Confidence            35667776 89999999999999999999999999888765431               11111  12333345666777


Q ss_pred             HHHHHHHHhcCCCCccEEEEcc
Q 019551          127 IKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       127 v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +.++.+.+.....+=+++|.+.
T Consensus        80 v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHHhccccCcEEEecC
Confidence            7777777765544445666655

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.42  E-value=0.0095  Score=46.43  Aligned_cols=79  Identities=25%  Similarity=0.347  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHH-HHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITE-IKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~  137 (339)
                      .|.+|+|.|+ +|+|...+..+...|. +|+.+++++++++.+.+     .+..  +++  |..+.+. +++..+...  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-----~GAd--~~i--n~~~~~~~~~~~~~~~~--   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-----FGAT--DFV--NPNDHSEPISQVLSKMT--   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----TTCC--EEE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-----cCCc--EEE--cCCCcchhHHHHHHhhc--
Confidence            4789999986 7788888888888877 78999999988765432     2322  222  3332221 222222222  


Q ss_pred             CCCccEEEEcccc
Q 019551          138 NKPVHVLVNNAGV  150 (339)
Q Consensus       138 ~~~id~lInnAG~  150 (339)
                      .+.+|+++.+.|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2479999999985

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0023  Score=57.76  Aligned_cols=82  Identities=21%  Similarity=0.341  Sum_probs=59.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      ..+++.+|||.|+ ||||.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++..++..
T Consensus        33 ~~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~  111 (426)
T d1yovb1          33 FLLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVP  111 (426)
T ss_dssp             HHHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEE
T ss_pred             HHHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEe
Confidence            3467889999999 8899999999999998 79998864                   3466777777777777777777


Q ss_pred             EeccCCCHHHHHHHHHHHhcCCCCccEEEEcc
Q 019551          117 ELCDLSSITEIKSFANRFSLKNKPVHVLVNNA  148 (339)
Q Consensus       117 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnA  148 (339)
                      +..++.+...  .++       ...|++|++.
T Consensus       112 ~~~~i~~~~~--~~~-------~~~DlVi~~~  134 (426)
T d1yovb1         112 HFNKIQDFND--TFY-------RQFHIIVCGL  134 (426)
T ss_dssp             ECSCGGGBCH--HHH-------TTCSEEEECC
T ss_pred             eeccccchHH--HHH-------Hhcchheecc
Confidence            7666654331  222       2567777654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0032  Score=50.38  Aligned_cols=45  Identities=24%  Similarity=0.286  Sum_probs=39.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRS  107 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~  107 (339)
                      |++.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            68889998 7899999999999999999999999888877666543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.0053  Score=48.67  Aligned_cols=39  Identities=31%  Similarity=0.251  Sum_probs=34.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      .+.||++.|.|. |.||+++|+.+...|++|+..++....
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            478999999986 999999999999999999999987654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.16  E-value=0.04  Score=41.96  Aligned_cols=115  Identities=16%  Similarity=0.127  Sum_probs=63.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-------TVYMVCRSK--EKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-------~Vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +|.|+||+|.+|.++|..|+..+.       .+++.+.++  ++++....++..... .....+..--.+.+.    +  
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~----~--   77 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIATDKEEIA----F--   77 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEESCHHHH----T--
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc-ccccccccCcccccc----c--
Confidence            689999999999999999987542       366666544  333333333332211 122222211111121    1  


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEEc
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAP-DARVITVS  197 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~~Iv~vs  197 (339)
                           ...|++|..+|........ .   ++.++.|.    ...+...+.+.+..+ .+.++.+|
T Consensus        78 -----~~~dvVVitag~~~~~g~s-r---~dll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 -----KDLDVAILVGSMPRRDGME-R---KDLLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             -----TTCSEEEECCSCCCCTTCC-T---TTTHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -----CCceEEEEecccCCCCCCc-h---hHHHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence                 3689999999987643322 2   22344444    455666666655423 44555554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.91  E-value=0.02  Score=45.14  Aligned_cols=44  Identities=27%  Similarity=0.249  Sum_probs=38.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR  106 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~  106 (339)
                      |+|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            46788888 789999999999999999999999988877666554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.74  E-value=0.058  Score=41.48  Aligned_cols=79  Identities=19%  Similarity=0.177  Sum_probs=58.4

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ....+|+|.|| |-.|++-++.....|++|.+.|.+.+++++......     ..+...   .++.+.+++.+.      
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~~~---~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHH------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----ccceee---hhhhhhHHHhhc------
Confidence            34568999998 788999999999999999999999988776554432     123332   356666766555      


Q ss_pred             CCccEEEEccccccC
Q 019551          139 KPVHVLVNNAGVLEN  153 (339)
Q Consensus       139 ~~id~lInnAG~~~~  153 (339)
                       .-|++|..+=+...
T Consensus        95 -~aDivI~aalipG~  108 (168)
T d1pjca1          95 -EADLLIGAVLVPGR  108 (168)
T ss_dssp             -TCSEEEECCCCTTS
T ss_pred             -cCcEEEEeeecCCc
Confidence             57999999876553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.67  E-value=0.0088  Score=47.96  Aligned_cols=38  Identities=18%  Similarity=0.134  Sum_probs=34.5

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+.||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            478999999987 89999999999999999999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.64  E-value=0.057  Score=41.46  Aligned_cols=85  Identities=14%  Similarity=0.142  Sum_probs=54.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHh----------hcCCccEEEEeccCCCHHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSKEKGETALSAIRS----------KTGNENVHLELCDLSSITEIKS  129 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~~~~~~~~~~l~~----------~~~~~~~~~~~~Dl~~~~~v~~  129 (339)
                      |+++|.|. |-||.++|+.|.+.|+  +|+..+|+++.++.+.+.-.-          ......+.++..   -++++.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~---p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS---PVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS---CHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccC---Cchhhhh
Confidence            46888876 9999999999999996  788999998877765543110          001122333332   3556777


Q ss_pred             HHHHHhcCCCCccEEEEcccc
Q 019551          130 FANRFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       130 ~~~~~~~~~~~id~lInnAG~  150 (339)
                      +++++......=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            777776554444455555543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.63  E-value=0.0079  Score=46.38  Aligned_cols=67  Identities=16%  Similarity=0.182  Sum_probs=43.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-----ccEEEEeccCCCHHHHHHHH
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN-----ENVHLELCDLSSITEIKSFA  131 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dl~~~~~v~~~~  131 (339)
                      +-|.|- |-+|.++|+.|+++|++|++.+|++++.++..+.-......     .+..++..=+.+.+++++++
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            445554 89999999999999999999999998877665421110000     01223334456667776665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.61  E-value=0.012  Score=47.05  Aligned_cols=39  Identities=18%  Similarity=0.153  Sum_probs=34.9

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ..+.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            3488999999987 89999999999999999999997654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.32  E-value=0.01  Score=43.83  Aligned_cols=69  Identities=13%  Similarity=0.293  Sum_probs=49.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      |+++|.|. +.+|+.+++.|  +|.+|++++.+++..+....        ..+.++.+|.++++.++++      ...+-
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH--------TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh--------cCccccccccCCHHHHHHh------hhhcC
Confidence            56888886 78999999999  46778889998887654321        2467888999998877653      12356


Q ss_pred             cEEEEc
Q 019551          142 HVLVNN  147 (339)
Q Consensus       142 d~lInn  147 (339)
                      +.+|.+
T Consensus        64 ~~vi~~   69 (129)
T d2fy8a1          64 RAVIVN   69 (129)
T ss_dssp             SEEEEC
T ss_pred             cEEEEe
Confidence            677643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.29  E-value=0.0066  Score=46.27  Aligned_cols=36  Identities=17%  Similarity=0.366  Sum_probs=32.8

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      +++||++||.|| |.+|..-|+.|.+.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            489999999999 669999999999999999999754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.25  E-value=0.029  Score=44.46  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=34.7

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ..+.||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            3578999999987 89999999999999999999997654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.21  E-value=0.09  Score=41.76  Aligned_cols=76  Identities=25%  Similarity=0.269  Sum_probs=55.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      +++|++||=-|++.|   .++..++..|+ +|+.++.+++.++.+.+.+...  +.+..++..|+.+.            
T Consensus        44 dl~g~~vLDlg~GtG---~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTG---VLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTC---HHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC------------
T ss_pred             CCCCCEEEECcCcch---HHHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh------------
Confidence            578999999998766   23334556786 8999999998888777776544  34677888886432            


Q ss_pred             CCCCccEEEEccccc
Q 019551          137 KNKPVHVLVNNAGVL  151 (339)
Q Consensus       137 ~~~~id~lInnAG~~  151 (339)
                       .+++|++|.|....
T Consensus       107 -~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCSEEEECCCCS
T ss_pred             -CCcCcEEEEcCccc
Confidence             35799999998653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.16  E-value=0.019  Score=45.60  Aligned_cols=38  Identities=24%  Similarity=0.231  Sum_probs=34.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+.||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            488999999987 89999999999999999999998644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.12  E-value=0.021  Score=45.13  Aligned_cols=37  Identities=22%  Similarity=0.214  Sum_probs=33.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      ++.++++.|.|. |.||+++|+.+...|++|+..+|..
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            578999999986 8999999999999999999999864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.11  E-value=0.037  Score=42.43  Aligned_cols=68  Identities=10%  Similarity=0.081  Sum_probs=44.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH-------hhcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIR-------SKTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~-------~~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      +|-+.| .|-+|.++|++|+++|++|.+.+|++++.+...+.-.       +...  ...++..-+.+.+.++.++..
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~--~~diii~~v~~~~~~~~v~~~   77 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYLD   77 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHT--SCSEEEECCSCHHHHHHHHHS
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhcc--ccCeeeecccchhhHHHHHhc
Confidence            455555 4899999999999999999999999887665543211       1111  123344445666666666543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.029  Score=43.05  Aligned_cols=38  Identities=32%  Similarity=0.386  Sum_probs=35.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      +.||+++|.|= |-||+.+|+.+...|++|++++.++-+
T Consensus        22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          22 IAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            78999999986 689999999999999999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.71  E-value=0.063  Score=38.38  Aligned_cols=69  Identities=13%  Similarity=0.139  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +.++.|.|| |-+|+-++....+.|+++++.+.+++....          ...-.++..|+.|.+.+.+++...     .
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~-----~   74 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE-----K   74 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh-----C
Confidence            457999995 789999999999999999999988653110          012246778999999999888753     5


Q ss_pred             ccEEE
Q 019551          141 VHVLV  145 (339)
Q Consensus       141 id~lI  145 (339)
                      +|++.
T Consensus        75 ~DviT   79 (111)
T d1kjqa2          75 PHYIV   79 (111)
T ss_dssp             CSEEE
T ss_pred             CceEE
Confidence            78774

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.64  E-value=0.033  Score=45.38  Aligned_cols=46  Identities=22%  Similarity=0.296  Sum_probs=39.9

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      ++.||+++|-|- |.+|..+|+.|.+.|++|+.++.+...++....+
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            478999999986 8999999999999999999999988776655543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.55  E-value=0.079  Score=41.02  Aligned_cols=36  Identities=25%  Similarity=0.261  Sum_probs=32.3

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 019551           69 ANAGIGYATAEGLASRGATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        69 as~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~  104 (339)
                      |.|-+|.++|++|++.|++|.+.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            458999999999999999999999999988877655

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.019  Score=43.88  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=31.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      ++.|.|+ |.||..+|..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5788888 999999999999999999999998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.47  E-value=0.041  Score=42.33  Aligned_cols=42  Identities=26%  Similarity=0.234  Sum_probs=36.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      ++.||+++|.|-|.=+|+.++.-|.++|++|.++......+.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            478999999999999999999999999999998876654443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.18  E-value=0.038  Score=40.22  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+|+++|.|| |-+|.++|..|+++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3688988887 89999999999999999999998764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.038  Score=42.79  Aligned_cols=42  Identities=24%  Similarity=0.249  Sum_probs=37.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHH
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGE   99 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~   99 (339)
                      +++||+++|.|.|.=+|+.+|.-|.++|++|.++......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            488999999999999999999999999999999887655443

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.15  E-value=0.21  Score=42.70  Aligned_cols=117  Identities=13%  Similarity=0.144  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGAN-AGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas-~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .|++||=.|+. |+++.+    ++..|+ +|+.++.+++.++.+.+.+....-..++.++..|+.+      ....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            37889877765 444443    445676 7999999999888887777654333467888777632      22333445


Q ss_pred             CCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019551          138 NKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVS  197 (339)
Q Consensus       138 ~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vs  197 (339)
                      ..+.|++|.+.......    .......    ......+.+.+++.++   ++|.+++.+
T Consensus       215 ~~~fD~Vi~DpP~~~~~----~~~~~~~----~~~y~~l~~~a~~ll~---pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQH----EKDLKAG----LRAYFNVNFAGLNLVK---DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCSS----GGGHHHH----HHHHHHHHHHHHTTEE---EEEEEEEEE
T ss_pred             cCCCCchhcCCccccCC----HHHHHHH----HHHHHHHHHHHHHHcC---CCcEEEEEe
Confidence            56899999887644322    1222221    2233345555555553   457766655

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.15  E-value=0.28  Score=40.70  Aligned_cols=111  Identities=17%  Similarity=0.190  Sum_probs=71.9

Q ss_pred             HHhhhcccccccccccccCCCCccccc-----------ccCCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchhH
Q 019551           31 GVYGYMNFTKNGFKEHSKNFKPEDMQA-----------RIEGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKG   98 (339)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~   98 (339)
                      .+.|...|....|.....-+-|++-..           ....++++-.|+++| |+.+++ +  ...++|++++.+++.+
T Consensus        70 YI~g~~~F~~~~f~v~~~vlIPRpeTE~lv~~~~~~~~~~~~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al  146 (271)
T d1nv8a_          70 YILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAV  146 (271)
T ss_dssp             HHHTEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHH
T ss_pred             hhcCcEEEeeeEEEEecCccCchhhhhhhhhhhhhhhccccccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHH
Confidence            345555566666666666666655211           123456665666666 444443 2  3578999999999988


Q ss_pred             HHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccEEEEccccccC
Q 019551           99 ETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLEN  153 (339)
Q Consensus        99 ~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~~  153 (339)
                      +-+.+.+....-..++.+...|+.+.         ....++++|++|.|......
T Consensus       147 ~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         147 EIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFASIEMILSNPPYVKS  192 (271)
T ss_dssp             HHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTTCCEEEECCCCBCG
T ss_pred             HHHHHHHHHcCCCceeEEeecccccc---------cccccCcccEEEEcccccCc
Confidence            88887776543345677888888643         23345789999999876643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.13  E-value=0.039  Score=40.21  Aligned_cols=35  Identities=34%  Similarity=0.396  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .+|+++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888877 8999999999999999999998865

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.11  E-value=0.094  Score=38.83  Aligned_cols=77  Identities=14%  Similarity=0.153  Sum_probs=52.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-CCEEE-EEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           63 NCVVTGANAGIGYATAEGLASR-GATVY-MVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G~~Vv-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ++.|.|++|-+|+++++...+. ++.++ .+++... +..    +...  +.+   +..|++.++.+.+.++...+.  .
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999987764 67765 4455332 221    1111  122   346999999999998888766  4


Q ss_pred             ccEEEEccccc
Q 019551          141 VHVLVNNAGVL  151 (339)
Q Consensus       141 id~lInnAG~~  151 (339)
                      +-++|-..|..
T Consensus        69 ~~~ViGTTG~~   79 (135)
T d1yl7a1          69 IHAVVGTTGFT   79 (135)
T ss_dssp             CEEEECCCCCC
T ss_pred             CCEEEeccccc
Confidence            55677666654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.03  E-value=0.05  Score=39.99  Aligned_cols=74  Identities=9%  Similarity=0.146  Sum_probs=53.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYM-VCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++.|.|++|-+|+++++.+.+.|+.++. ++++...          ...+.+   +..|++.++.+.+.++...+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            4889999999999999999999998764 4554321          111223   346999999999999888766  45


Q ss_pred             cEEEEccccc
Q 019551          142 HVLVNNAGVL  151 (339)
Q Consensus       142 d~lInnAG~~  151 (339)
                      -+++-..|..
T Consensus        67 p~ViGTTG~~   76 (128)
T d1vm6a3          67 GLVLGTTALK   76 (128)
T ss_dssp             EEEECCCSCC
T ss_pred             CEEEEcCCCC
Confidence            5777666654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.97  E-value=0.14  Score=39.43  Aligned_cols=119  Identities=12%  Similarity=0.134  Sum_probs=63.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-----CCEEEEEecCchhHHHHHHHHHh---hcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYATAEGLASR-----GATVYMVCRSKEKGETALSAIRS---KTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-----G~~Vvl~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      ++.|.||++.-...+...+...     +.+|+++|.++++++...+.+..   ..+. .......  +|..   +.+   
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~d~~---eal---   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAP-DIEFAAT--TDPE---EAF---   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCT-TSEEEEE--SCHH---HHH---
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCC-CcceEec--CChh---hcc---
Confidence            4666687553222333344332     34899999999988754444332   2222 2222211  1222   222   


Q ss_pred             hcCCCCccEEEEccccccCCCCCChhhhhhhhhhh----------------hhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          135 SLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVN----------------VLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN----------------~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                          ..-|++|+.||......    ..-++.+..|                ..-..-..+.+.+.+.+..+.+.++++|-
T Consensus        76 ----~~AD~Vvitag~~~~~g----~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TN  147 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVGKYAM----RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN  147 (167)
T ss_dssp             ----SSCSEEEECCCTTHHHH----HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ----CCCCEEEECCCcCCCCc----eeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence                26899999999754321    1111112222                12234456677777777767788887764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.85  E-value=0.3  Score=41.29  Aligned_cols=83  Identities=14%  Similarity=0.033  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-CCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-GNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++++||=..+..| ++.    .++..|++|+.++.++..++.+.+.+.... ...++.++..|+.      ++++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            5778886665544 333    455689999999999988888777665432 2236888887763      223333334


Q ss_pred             CCCccEEEEcccccc
Q 019551          138 NKPVHVLVNNAGVLE  152 (339)
Q Consensus       138 ~~~id~lInnAG~~~  152 (339)
                      ..+.|+||.+.-...
T Consensus       202 ~~~fD~IilDPP~f~  216 (309)
T d2igta1         202 GSTYDIILTDPPKFG  216 (309)
T ss_dssp             TCCBSEEEECCCSEE
T ss_pred             CCCCCEEEECCCccc
Confidence            457999999865443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.71  E-value=0.14  Score=40.56  Aligned_cols=71  Identities=25%  Similarity=0.272  Sum_probs=52.1

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.||+||=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.+      .++.++.+|+.+.            
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~------~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC------GGVNFMVADVSEI------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC------TTSEEEECCGGGC------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc------ccccEEEEehhhc------------
Confidence            5789999999998873   3445677786 6999999987766554432      3577888887532            


Q ss_pred             CCCCccEEEEcccc
Q 019551          137 KNKPVHVLVNNAGV  150 (339)
Q Consensus       137 ~~~~id~lInnAG~  150 (339)
                       .++.|++|.|...
T Consensus       105 -~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -SGKYDTWIMNPPF  117 (197)
T ss_dssp             -CCCEEEEEECCCC
T ss_pred             -CCcceEEEeCccc
Confidence             2589999999754

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.67  E-value=0.34  Score=36.21  Aligned_cols=77  Identities=12%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             cCCCEEEEEcCCCc-hHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGANAG-IGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas~g-IG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++|+.||=.|+++| +|.    ..+.+|+ +|+.++.+++..+...+.+....-..++.++..|..+      +.+   .
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~   79 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---C   79 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---H
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---c
Confidence            67899987776555 554    4466787 7999999998888777777655444578999887532      222   2


Q ss_pred             CCCCccEEEEcc
Q 019551          137 KNKPVHVLVNNA  148 (339)
Q Consensus       137 ~~~~id~lInnA  148 (339)
                      ..++.|+++.+.
T Consensus        80 ~~~~fDiIf~DP   91 (152)
T d2esra1          80 LTGRFDLVFLDP   91 (152)
T ss_dssp             BCSCEEEEEECC
T ss_pred             cccccceeEech
Confidence            335789998765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.66  E-value=0.053  Score=39.34  Aligned_cols=34  Identities=26%  Similarity=0.400  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478888887 8999999999999999999999875

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.045  Score=39.96  Aligned_cols=34  Identities=24%  Similarity=0.274  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378899998 6899999999999999999999974

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.64  E-value=0.12  Score=42.00  Aligned_cols=76  Identities=17%  Similarity=0.151  Sum_probs=57.5

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ..+++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.+...  +.++.++..|+.+.+           ..
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~~   99 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------IN   99 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------CS
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------cc
Confidence            456899999998884   78888999999999999998887776666544  346888888876542           12


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      ++.|++++..+.
T Consensus       100 ~~fD~i~~~~~~  111 (246)
T d1y8ca_         100 RKFDLITCCLDS  111 (246)
T ss_dssp             CCEEEEEECTTG
T ss_pred             ccccccceeeee
Confidence            479998875443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.56  E-value=0.16  Score=39.76  Aligned_cols=37  Identities=24%  Similarity=0.203  Sum_probs=33.4

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .+.++++.|.|. |.||+++|+.+...|++|+..++..
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            478999999965 8999999999999999999999864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.52  E-value=0.052  Score=41.02  Aligned_cols=40  Identities=28%  Similarity=0.407  Sum_probs=33.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHH
Q 019551           64 CVVTGANAGIGYATAEGLASRG-ATVYMVCRSKEKGETALSA  104 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~  104 (339)
                      +.+.|+ |-+|.++++.|.+.| ++|++.+|++++.++..++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            556666 999999999999887 8999999999887766554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.50  E-value=0.059  Score=43.73  Aligned_cols=47  Identities=21%  Similarity=0.343  Sum_probs=37.8

Q ss_pred             CCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           49 NFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        49 ~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+.|+.+.+.-.+|.++|.|| |--|...|..|+++|++|.++.++.+
T Consensus        37 ~~~p~~~~~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          37 GWHPEKFRQTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCCSSCCCCCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCCccCcccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            445555545567899999998 67799999999999999999988653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.48  E-value=0.054  Score=38.93  Aligned_cols=35  Identities=29%  Similarity=0.317  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478899988 89999999999999999999998764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.40  E-value=0.16  Score=43.05  Aligned_cols=75  Identities=21%  Similarity=0.221  Sum_probs=54.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      ++||+||-.|++.|+   ++..+++.|+ +|+.++.++.- ..+.+...+.....++.++..|+.+...          .
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            579999999998885   5667788897 79999988653 3444444444445678999988876531          2


Q ss_pred             CCCccEEEEc
Q 019551          138 NKPVHVLVNN  147 (339)
Q Consensus       138 ~~~id~lInn  147 (339)
                      ..+.|++|..
T Consensus       100 ~~~~D~Ivse  109 (311)
T d2fyta1         100 VEKVDVIISE  109 (311)
T ss_dssp             CSCEEEEEEC
T ss_pred             cccceEEEEe
Confidence            2479999875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.36  E-value=0.3  Score=38.51  Aligned_cols=75  Identities=16%  Similarity=0.111  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +.+||=.|++.|.   ++..|++.|++|+.++.+++-++.+.+......  ..+..+..|..+..          ...+.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~--~~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC----------SCTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc--cccccccccccccc----------ccCcC
Confidence            4578999998885   677889999999999999888877776665543  35667777776533          12247


Q ss_pred             ccEEEEcccc
Q 019551          141 VHVLVNNAGV  150 (339)
Q Consensus       141 id~lInnAG~  150 (339)
                      .|+++.+..+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8998876543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.29  E-value=0.17  Score=39.27  Aligned_cols=84  Identities=19%  Similarity=0.200  Sum_probs=51.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc------------------------CCccEEEEe
Q 019551           63 NCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT------------------------GNENVHLEL  118 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~~~  118 (339)
                      ++.|.|| |..|.++|..|++.|++|.+.+|..+.  +..+.+.+..                        .+.++.++.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            4667787 899999999999999999999986442  2333443221                        111222222


Q ss_pred             ccCCCHHHHHHHHHHHhcCCCCccEEEEcccccc
Q 019551          119 CDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLE  152 (339)
Q Consensus       119 ~Dl~~~~~v~~~~~~~~~~~~~id~lInnAG~~~  152 (339)
                      +   -...++.+++++......--+++.+.|...
T Consensus        79 v---ps~~~~~~~~~l~~~l~~~~ii~~tkg~~~  109 (180)
T d1txga2          79 V---STDGVLPVMSRILPYLKDQYIVLISKGLID  109 (180)
T ss_dssp             S---CGGGHHHHHHHHTTTCCSCEEEECCCSEEE
T ss_pred             c---chhhhHHHHHhhccccccceecccccCccc
Confidence            1   245566777777665544445555666643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.25  E-value=0.17  Score=39.32  Aligned_cols=43  Identities=19%  Similarity=0.101  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALS  103 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~  103 (339)
                      ..-.|+|.|| +-.|.+-++-....|++|.+.|.+.+++++..+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            4458899998 788999999999999999999999987665543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.22  E-value=0.042  Score=43.36  Aligned_cols=40  Identities=23%  Similarity=0.195  Sum_probs=33.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETAL  102 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~  102 (339)
                      +++.|.|| |-.|.++|..|++.|++|.+.+|+++..+...
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            45888888 67999999999999999999999987655443

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.051  Score=50.04  Aligned_cols=57  Identities=14%  Similarity=0.254  Sum_probs=42.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCccEEE
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRS-------------------KEKGETALSAIRSKTGNENVHL  116 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~  116 (339)
                      +.+.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~   99 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSF   99 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCE
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEE
Confidence            66789999997 7999999999999997 78888753                   2356666667776665444433

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.17  E-value=0.11  Score=40.02  Aligned_cols=123  Identities=13%  Similarity=0.085  Sum_probs=64.0

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHC----CCEEEEEecCchh--HHHHHHHH---HhhcCCccEEEEeccCCCHHHHHHHHH
Q 019551           63 NCVVTGA-NAGIGYATAEGLASR----GATVYMVCRSKEK--GETALSAI---RSKTGNENVHLELCDLSSITEIKSFAN  132 (339)
Q Consensus        63 ~vlITGa-s~gIG~a~a~~l~~~----G~~Vvl~~r~~~~--~~~~~~~l---~~~~~~~~~~~~~~Dl~~~~~v~~~~~  132 (339)
                      ++.|.|| +.|.+.+++..+...    +.++++.+.++++  ++......   ....+ ..+.+  ...+|..+   .. 
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~-~~~~~--~~~td~~~---al-   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAG-VPIEI--HLTLDRRR---AL-   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTT-CCCEE--EEESCHHH---HH-
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcC-CCcee--eecCCchh---hc-
Confidence            3566676 557777777766653    2489999998764  33222111   11111 12222  12244322   12 


Q ss_pred             HHhcCCCCccEEEEccccccCCCCCChhhhhhhhh------------hhhhHHHHHHHHHHHHHHhhCCCCEEEEEcC
Q 019551          133 RFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFA------------VNVLGTYTITESMVPLLEKAAPDARVITVSS  198 (339)
Q Consensus       133 ~~~~~~~~id~lInnAG~~~~~~~~~~~~~~~~~~------------vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS  198 (339)
                            ..-|++|+.||+.........+.+.....            ........+.+.+.+.+.+..+.+.++++|-
T Consensus        76 ------~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtN  147 (169)
T d1s6ya1          76 ------DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN  147 (169)
T ss_dssp             ------TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ------CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence                  25799999999765211000000000000            1123445667778888888777788888764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.14  E-value=0.38  Score=37.22  Aligned_cols=76  Identities=22%  Similarity=0.198  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+||=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+.+..-..++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            4788998898777   44455677788999999999999988888776543357888888741          1122345


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      ..|.++.+.
T Consensus       100 ~~D~v~~~~  108 (186)
T d1l3ia_         100 DIDIAVVGG  108 (186)
T ss_dssp             CEEEEEESC
T ss_pred             CcCEEEEeC
Confidence            789998764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.05  E-value=0.42  Score=40.43  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=53.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.+....-..++.++..|+.+.+          ..
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence            579999999998885   5667788886 6999998754 4444444444333457899998887653          12


Q ss_pred             CCCccEEEEcc
Q 019551          138 NKPVHVLVNNA  148 (339)
Q Consensus       138 ~~~id~lInnA  148 (339)
                      ..++|+++..-
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            35789998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.01  E-value=0.061  Score=43.64  Aligned_cols=35  Identities=34%  Similarity=0.432  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +.|.|+|.|| |-.|.++|..|+++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3567999998 7889999999999999999999863

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.82  E-value=0.075  Score=41.07  Aligned_cols=37  Identities=41%  Similarity=0.553  Sum_probs=34.3

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      +++||+++|.|-|.=+|+-+|.-|+++|+.|..+..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            5899999999999999999999999999999988754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.66  E-value=0.073  Score=38.34  Aligned_cols=34  Identities=18%  Similarity=0.274  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888888 8999999999999999999999864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.49  E-value=0.086  Score=37.79  Aligned_cols=33  Identities=21%  Similarity=0.190  Sum_probs=29.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      |.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            67888887 8999999999999999999999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.49  E-value=0.064  Score=44.38  Aligned_cols=34  Identities=29%  Similarity=0.262  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +|+|+|.|| |-=|...|..|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988 6678999999999999999998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.48  E-value=0.11  Score=37.30  Aligned_cols=34  Identities=26%  Similarity=0.175  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            478899988 8999999999999999999998864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.47  E-value=0.093  Score=39.61  Aligned_cols=41  Identities=15%  Similarity=0.181  Sum_probs=33.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      +.+.| +|-+|.++++.|.+.|++|++.+|+.++.++..++.
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            44554 589999999999999999999999988776655443

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.45  E-value=0.1  Score=40.43  Aligned_cols=64  Identities=14%  Similarity=0.104  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-----------CCccEEEEeccCCCHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKT-----------GNENVHLELCDLSSITE  126 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~~~~~  126 (339)
                      .|++||..|++.|   ..+..|+++|++|+.++.+++-++.+.+...+..           ......++.+|..+...
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            5789999999887   4777899999999999999988887776654321           12234567777766543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.45  E-value=0.35  Score=37.05  Aligned_cols=122  Identities=16%  Similarity=0.206  Sum_probs=66.9

Q ss_pred             EEEEEcCCCchHHH--HHHHHHHC----CCEEEEEecCchhHHHHHHHHHh---hcCCccEEEEeccCCCHHHHHHHHHH
Q 019551           63 NCVVTGANAGIGYA--TAEGLASR----GATVYMVCRSKEKGETALSAIRS---KTGNENVHLELCDLSSITEIKSFANR  133 (339)
Q Consensus        63 ~vlITGas~gIG~a--~a~~l~~~----G~~Vvl~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~  133 (339)
                      ++.|.|| |.+|..  +...++..    +.+++++|.++++++.....+..   ..+ ....+...  +|.++   ..+ 
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~-~~~~i~~~--td~~e---aL~-   75 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG-ADLKFEKT--MNLDD---VII-   75 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTT-CCCEEEEE--SCHHH---HHT-
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcC-CCeEEEEe--CChhh---ccc-
Confidence            5677786 656654  44455543    46999999999887765544433   222 22222221  23332   222 


Q ss_pred             HhcCCCCccEEEEccccccCCCCCChhhhhh---------hhhhh---------hhHHHHHHHHHHHHHHhhCCCCEEEE
Q 019551          134 FSLKNKPVHVLVNNAGVLENNRLITSEGFEL---------NFAVN---------VLGTYTITESMVPLLEKAAPDARVIT  195 (339)
Q Consensus       134 ~~~~~~~id~lInnAG~~~~~~~~~~~~~~~---------~~~vN---------~~~~~~l~~~~l~~m~~~~~~~~Iv~  195 (339)
                            ..|++|+.++..........+.+..         .-+.+         .....-..+.+.+.+++..+.+.+++
T Consensus        76 ------dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~  149 (171)
T d1obba1          76 ------DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQ  149 (171)
T ss_dssp             ------TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             ------CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEE
Confidence                  6899999987654211000000000         00011         23355677888888888767788888


Q ss_pred             EcC
Q 019551          196 VSS  198 (339)
Q Consensus       196 vsS  198 (339)
                      +|-
T Consensus       150 ~TN  152 (171)
T d1obba1         150 AAN  152 (171)
T ss_dssp             CSS
T ss_pred             ECC
Confidence            774

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.39  E-value=0.089  Score=38.13  Aligned_cols=35  Identities=20%  Similarity=0.207  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            368889888 89999999999999999999998753

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.38  E-value=0.19  Score=42.31  Aligned_cols=25  Identities=24%  Similarity=0.371  Sum_probs=22.0

Q ss_pred             CCchHHHHHHHHHHCCCEEEEEecC
Q 019551           70 NAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        70 s~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      ||..|.++|+.+..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4679999999999999999998654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.37  E-value=0.09  Score=38.10  Aligned_cols=32  Identities=31%  Similarity=0.329  Sum_probs=28.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           62 KNCVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56788887 899999999999999999999876

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.23  E-value=0.11  Score=37.29  Aligned_cols=36  Identities=19%  Similarity=0.280  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4788999887 89999999999999999999998753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.14  E-value=0.48  Score=40.21  Aligned_cols=84  Identities=18%  Similarity=0.130  Sum_probs=56.5

Q ss_pred             ccCCCEEEEEcCC-CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           58 RIEGKNCVVTGAN-AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        58 ~l~~k~vlITGas-~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ..+|++||=.++. ||++.+    ++..|.+|+.++.+++.++.+.+.+.... -.++.++..|..+.      .+.+..
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHH
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHh
Confidence            3578899877765 444433    44456799999999998888877776542 24678888776432      223333


Q ss_pred             CCCCccEEEEcccccc
Q 019551          137 KNKPVHVLVNNAGVLE  152 (339)
Q Consensus       137 ~~~~id~lInnAG~~~  152 (339)
                      ...+.|.+|.+.....
T Consensus       212 ~~~~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         212 EGERFDLVVLDPPAFA  227 (318)
T ss_dssp             TTCCEEEEEECCCCSC
T ss_pred             hhcCCCEEEEcCCccc
Confidence            4468999999875443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.13  E-value=0.097  Score=40.78  Aligned_cols=37  Identities=35%  Similarity=0.394  Sum_probs=33.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .++|.|+|.|| |--|.+.|..|+++|++|.+..++++
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            56799999998 78899999999999999999998753

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.10  E-value=0.18  Score=39.64  Aligned_cols=80  Identities=15%  Similarity=0.079  Sum_probs=59.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCccE
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHV  143 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  143 (339)
                      +=+|-|+||...++.+.+ . +.+|+.+|++++.++.+.+.+...  +.++.++..++++...+   ....  ..+.+|.
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~~vdg   98 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIEKVDG   98 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCSCEEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCCCcce
Confidence            336888899888888876 3 569999999999888777776543  34789999888775543   2222  2368999


Q ss_pred             EEEcccccc
Q 019551          144 LVNNAGVLE  152 (339)
Q Consensus       144 lInnAG~~~  152 (339)
                      ++...|++.
T Consensus        99 Il~DlGvSs  107 (192)
T d1m6ya2          99 ILMDLGVST  107 (192)
T ss_dssp             EEEECSCCH
T ss_pred             eeeccchhH
Confidence            999988853

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.04  E-value=0.067  Score=41.66  Aligned_cols=35  Identities=17%  Similarity=0.166  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCE-EEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGAT-VYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~-Vvl~~r~~~   96 (339)
                      +|+|+|.|| |-.|...|..|+++|++ |.++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            688999998 88999999999999995 989988753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.04  E-value=2.9  Score=35.02  Aligned_cols=117  Identities=13%  Similarity=0.119  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc-CCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGAN-AGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKT-GNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas-~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      .|++||=..+. ||.+.    +++..|+ .|+.++.++..++.+.+.+.... ...++.++..|+.      +..+....
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            58899866654 44443    3456787 69999999998888877775432 2346888887763      23334444


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVS  197 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vs  197 (339)
                      ...+.|++|.+........    +.....    ......+.+.++++++   ++|.+++.|
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~----~~~~~~----~~~~~~L~~~a~~ll~---pgG~l~~~s  263 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNK----KEVFSV----SKDYHKLIRQGLEILS---ENGLIIAST  263 (317)
T ss_dssp             TTCCEEEEEECCCCC---------CCCCH----HHHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred             hcCCCCEEEEcChhhccch----hHHHHH----HHHHHHHHHHHHHHcC---CCCEEEEEe
Confidence            5568999999865433221    111111    1123345666666654   346555533

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.92  E-value=0.38  Score=36.05  Aligned_cols=83  Identities=19%  Similarity=0.171  Sum_probs=54.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC----ccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGN----ENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      +-+.|- |-+|.++|++|.+.|+.+ ...|+.++.++..++.......    .....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 889999999999988755 6788888777666554321110    1223334456677888888888777665


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            666666655

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.72  E-value=0.11  Score=37.01  Aligned_cols=34  Identities=26%  Similarity=0.274  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            467888877 8999999999999999999998864

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.14  Score=41.26  Aligned_cols=79  Identities=13%  Similarity=0.142  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh----------------cCCccEEEEeccCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK----------------TGNENVHLELCDLSS  123 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~~Dl~~  123 (339)
                      .+++||.-|++.|   ..+..|+++|++|+.++-+++.++.+.++....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5789999999887   568889999999999999998877666654321                112357777777654


Q ss_pred             HHHHHHHHHHHhcCCCCccEEEEcccc
Q 019551          124 ITEIKSFANRFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       124 ~~~v~~~~~~~~~~~~~id~lInnAG~  150 (339)
                      ...         ...+..|+++-..-+
T Consensus       122 l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSST
T ss_pred             ccc---------cccCceeEEEEEEEE
Confidence            331         122467777655443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.65  E-value=0.13  Score=37.75  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .+|+++|.|| |-+|.++|..|.+.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999987 89999999999999999999998653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.63  E-value=0.15  Score=38.87  Aligned_cols=38  Identities=29%  Similarity=0.395  Sum_probs=35.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchh
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEK   97 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~   97 (339)
                      +.||+++|.|= |-+|+.+|+++...|++|+++..+|-+
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            78999999987 789999999999999999999999854

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.54  E-value=1.3  Score=34.48  Aligned_cols=142  Identities=17%  Similarity=0.072  Sum_probs=78.1

Q ss_pred             cCCCEEEEEcCC--CchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           59 IEGKNCVVTGAN--AGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        59 l~~k~vlITGas--~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ..|.++++....  ...+.+++..|.+.|..++.+.-..+                         .+.+.   +.+.+ .
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~~~---l~~~~-~   73 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGRDE---LAERL-R   73 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCHHH---HHHHH-T
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCHHH---HHHHh-h
Confidence            456655655433  34777888888889988776654321                         12222   22222 3


Q ss_pred             CCCCccEEEEccccccCCCCCChhhhhhhhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEcCccccccccCccccccCCC
Q 019551          137 KNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHLTDDLEFNSGS  216 (339)
Q Consensus       137 ~~~~id~lInnAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~~Iv~vsS~~~~~~~~~~~~~~~~~~  216 (339)
                      ..+.++.+|+..+......... +.    ....+...+.++|.+.    +.....++.+++..+....            
T Consensus        74 ~~~~~~~vv~l~~~~~~~~~~~-~~----~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~~------------  132 (209)
T d2fr1a2          74 SVGEVAGVLSLLAVDEAEPEEA-PL----ALASLADTLSLVQAMV----SAELGCPLWTVTESAVATG------------  132 (209)
T ss_dssp             TSCCCSEEEECTTTTCCCCSSC-GG----GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCSS------------
T ss_pred             ccCCCCeEEEeCCCCCCCCcch-hH----HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCcccC------------
Confidence            4467888888766543322211 11    1223445556666543    2224566777766443211            


Q ss_pred             CcchHHHHHhHHHHHHHHHHHHHHHcCCCeEEEEe
Q 019551          217 FDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSM  251 (339)
Q Consensus       217 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v~~v  251 (339)
                       +.-..-....+++.+|.|+++.|+....+++..+
T Consensus       133 -~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         133 -PFERVRNAAHGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             -TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             -CCcccCCHhHHhHHHHHHHHHHhCCCceEEEEEC
Confidence             0111123467889999999999986544555554

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.32  E-value=0.51  Score=38.63  Aligned_cols=73  Identities=16%  Similarity=0.120  Sum_probs=52.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ..|++||=.|+++|+   ++..+++.|++|+.++.+++.++.+.+.....  +.+..++..|+.+      .   .  ..
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~------~---~--~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA------A---L--PF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH------H---G--GG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc------c---c--cc
Confidence            468899999999886   34457788999999999999988887776544  2345666665421      1   1  12


Q ss_pred             CCccEEEEc
Q 019551          139 KPVHVLVNN  147 (339)
Q Consensus       139 ~~id~lInn  147 (339)
                      ++.|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            579999876

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.13  E-value=0.56  Score=37.21  Aligned_cols=81  Identities=22%  Similarity=0.166  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+||-.|+++|--.++.-++...+.+|+.++.+++.++.+.+.+... +-.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-cccccccccCchHHcc----------cccc
Confidence            4779999999888666655556656679999999999888888777654 3346777777654311          1124


Q ss_pred             CccEEEEccccc
Q 019551          140 PVHVLVNNAGVL  151 (339)
Q Consensus       140 ~id~lInnAG~~  151 (339)
                      ..|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            789999887653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.95  E-value=0.098  Score=37.93  Aligned_cols=35  Identities=31%  Similarity=0.286  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            478889888 89999999999999999999998754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.86  E-value=0.099  Score=43.03  Aligned_cols=31  Identities=29%  Similarity=0.232  Sum_probs=28.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 8999999999999999999999864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.73  E-value=0.17  Score=37.95  Aligned_cols=37  Identities=19%  Similarity=0.192  Sum_probs=30.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      +-|.| .|-+|.++|+.|.++|++|+..++++++....
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            44554 49999999999999999999999887765443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.57  E-value=0.19  Score=39.73  Aligned_cols=37  Identities=27%  Similarity=0.192  Sum_probs=30.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETA  101 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~  101 (339)
                      +.|.| .|-+|..+|..|++.|++|++.|.++++.++.
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            45564 59999999999999999999999997765443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.50  E-value=0.22  Score=37.40  Aligned_cols=36  Identities=28%  Similarity=0.275  Sum_probs=29.8

Q ss_pred             CCEEEEE-cCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVT-GANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlIT-Gas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ++.++|. .+++-||.++|..|++.|++|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            5566655 45688999999999999999999998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.47  E-value=0.18  Score=42.37  Aligned_cols=35  Identities=23%  Similarity=0.247  Sum_probs=31.8

Q ss_pred             cccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe
Q 019551           57 ARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC   92 (339)
Q Consensus        57 ~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~   92 (339)
                      .+++||+|+|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4588999999987 8999999999999999998776

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.19  E-value=1.3  Score=34.08  Aligned_cols=82  Identities=11%  Similarity=0.110  Sum_probs=56.1

Q ss_pred             ccCCCEEEEEc-CCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHh
Q 019551           58 RIEGKNCVVTG-ANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        58 ~l~~k~vlITG-as~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .+.|+++|=-. |||++|.+    .+.+|+ +|+.++.+++..+.+.+.+....-..++.++..|+.+      ++++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            35688887555 45556665    566888 6999999998888777777655434578888877632      334444


Q ss_pred             cCCCCccEEEEccc
Q 019551          136 LKNKPVHVLVNNAG  149 (339)
Q Consensus       136 ~~~~~id~lInnAG  149 (339)
                      ....+.|+++.+..
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            44457999986653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.13  E-value=0.62  Score=37.09  Aligned_cols=80  Identities=28%  Similarity=0.301  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+||..|+++|--.++.-+++  |.+|+.+.++++-.+...+.+.+. +-.++.++..|..+-.          ...+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g~----------~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKGF----------PPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccCC----------cccC
Confidence            57799999999998888777776  577999999987777666666554 3468999998875311          1235


Q ss_pred             CccEEEEcccccc
Q 019551          140 PVHVLVNNAGVLE  152 (339)
Q Consensus       140 ~id~lInnAG~~~  152 (339)
                      +.|.++.++++..
T Consensus       145 pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         145 PYDVIIVTAGAPK  157 (215)
T ss_dssp             CEEEEEECSBBSS
T ss_pred             cceeEEeeccccc
Confidence            8999988887653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.13  E-value=0.18  Score=40.92  Aligned_cols=35  Identities=26%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .++|+|.|| |--|..+|..|+++|.+|+++.|+++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            467899998 67789999999999999999998753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.95  E-value=0.21  Score=36.28  Aligned_cols=34  Identities=15%  Similarity=0.173  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            578999998 8999999999999999999998864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.92  E-value=0.44  Score=38.33  Aligned_cols=73  Identities=16%  Similarity=0.107  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .++++|=.|++.|   .++..|+++|++|+.++.+++-++.+.+++...  +.++.++..|+.+..           ..+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------ccc
Confidence            4678999999887   556779999999999999998777777766554  336888888886643           114


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      ..|.+++.-
T Consensus       105 ~fD~I~~~~  113 (251)
T d1wzna1         105 EFDAVTMFF  113 (251)
T ss_dssp             CEEEEEECS
T ss_pred             ccchHhhhh
Confidence            689888753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.84  E-value=0.17  Score=38.30  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC--EEEEEecCc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA--TVYMVCRSK   95 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~--~Vvl~~r~~   95 (339)
                      .||+++|.|| |-.|.++|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 7889999999999874  788888765

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.24  E-value=2.1  Score=31.28  Aligned_cols=87  Identities=14%  Similarity=0.028  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCC---CchHHHHHHHHHHCCCEEEEEecCchhHH--HHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHH
Q 019551           60 EGKNCVVTGAN---AGIGYATAEGLASRGATVYMVCRSKEKGE--TALSAIRSKTGNENVHLELCDLSSITEIKSFANRF  134 (339)
Q Consensus        60 ~~k~vlITGas---~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  134 (339)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...  .....+.+.-...++..+.   ..++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~---vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLF---VKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEEC---SCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEE---eCHHHHHHHHHHH
Confidence            56899999999   67999999999999999999986543211  0111121111112232222   3577788888887


Q ss_pred             hcCCCCccEEEEccccc
Q 019551          135 SLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       135 ~~~~~~id~lInnAG~~  151 (339)
                      .+.  .+..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  355677766644

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.20  E-value=0.16  Score=35.65  Aligned_cols=49  Identities=14%  Similarity=0.103  Sum_probs=36.3

Q ss_pred             cccccCCCCcccccccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           44 KEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        44 ~~~~~~~~~~~~~~~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      ..|+..|+..   .+++||+|+|.|++ -=|..+|..|++.+.+++...|+..
T Consensus        18 i~Hs~~y~~~---~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          18 VLHSSLFREP---ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             EEEGGGCCCG---GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             EEECCcCcch---hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3455555532   34889999999985 5678899999998888887777653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.19  E-value=0.23  Score=40.49  Aligned_cols=34  Identities=38%  Similarity=0.441  Sum_probs=30.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC   92 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~   92 (339)
                      +++||+|+|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            47899999997 58999999999999999998766

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.14  E-value=1.1  Score=33.68  Aligned_cols=82  Identities=17%  Similarity=0.207  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccC---CCHHHHHHHHHHHhc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDL---SSITEIKSFANRFSL  136 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~  136 (339)
                      +|+++.|.+.|||.|--++-.+.+.|.++.-.  +++    ..+++.+..+.....--.+|+   .+.+...++++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~----t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEK----TIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHH----HHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHH----HHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            47888888889999999999999999776433  333    333343333322211122344   356667777766554


Q ss_pred             CCCCccEEEEcc
Q 019551          137 KNKPVHVLVNNA  148 (339)
Q Consensus       137 ~~~~id~lInnA  148 (339)
                      . +.+|.++...
T Consensus        76 d-~~vd~v~v~~   86 (163)
T d2csua3          76 D-PNVDMLIAIC   86 (163)
T ss_dssp             S-TTCSEEEEEE
T ss_pred             C-CCcCEEEEee
Confidence            3 5678765543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.11  E-value=0.16  Score=42.06  Aligned_cols=37  Identities=22%  Similarity=0.279  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCchHHHH-----HHHHHHCCCEEEEEecCch
Q 019551           60 EGKNCVVTGANAGIGYAT-----AEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~-----a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .++.++|+.|-||+|+.+     |..|+++|++|.+++-+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467888888899999976     7899999999999999865

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.09  E-value=0.17  Score=41.63  Aligned_cols=34  Identities=24%  Similarity=0.423  Sum_probs=30.7

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEe
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLASRGATVYMVC   92 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~   92 (339)
                      +++||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            47899999999 58999999999999999998765

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.08  E-value=0.13  Score=41.79  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=29.2

Q ss_pred             ccCCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEe
Q 019551           58 RIEGKNCVVTGANAGIGYATAEGLAS-RGATVYMVC   92 (339)
Q Consensus        58 ~l~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~   92 (339)
                      +++|++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            37899999987 59999999999985 599988766

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=2  Score=31.87  Aligned_cols=46  Identities=15%  Similarity=0.154  Sum_probs=31.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhh
Q 019551           62 KNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSK  108 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~  108 (339)
                      |++.|-|+||.||..+..-+.+.  .++|+.++-+. ..+.+.+++.+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHH
Confidence            57899999999999999988876  46777655322 223344444443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=88.85  E-value=1.8  Score=30.42  Aligned_cols=81  Identities=10%  Similarity=0.107  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      ||++||.=-..-+-..+...|.+.|++|+..+.+.+.   +.+.+.+..  .++.++-.++-+.+.+ ++++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~--~dliilD~~mp~~~G~-e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELK--PDIVTMDITMPEMNGI-DAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHC--CSEEEEECSCGGGCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhcc--CCEEEEecCCCCCCHH-HHHHHHHHhCCC
Confidence            7899999988899999999999999999877666544   333444432  3455554444444433 456666665555


Q ss_pred             ccEEEEc
Q 019551          141 VHVLVNN  147 (339)
Q Consensus       141 id~lInn  147 (339)
                      +-+++..
T Consensus        75 ~pvi~ls   81 (118)
T d1u0sy_          75 AKIIVCS   81 (118)
T ss_dssp             CCEEEEE
T ss_pred             CcEEEEE
Confidence            6666544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.60  E-value=0.69  Score=31.17  Aligned_cols=70  Identities=17%  Similarity=0.181  Sum_probs=44.8

Q ss_pred             EEEEEcCCCchHH-HHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCCc
Q 019551           63 NCVVTGANAGIGY-ATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPV  141 (339)
Q Consensus        63 ~vlITGas~gIG~-a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  141 (339)
                      ++-+.|- +|+|. ++|+.|.++|++|...|+......   ++|++.  +.++. ..-|..+.              ...
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~--Gi~i~-~gh~~~~i--------------~~~   61 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKL--GIPIF-VPHSADNW--------------YDP   61 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHT--TCCEE-SSCCTTSC--------------CCC
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHC--CCeEE-eeeccccc--------------CCC
Confidence            3445554 78887 789999999999999999865433   334433  22221 11222221              368


Q ss_pred             cEEEEccccccC
Q 019551          142 HVLVNNAGVLEN  153 (339)
Q Consensus       142 d~lInnAG~~~~  153 (339)
                      |.+|...++...
T Consensus        62 d~vV~SsAI~~~   73 (89)
T d1j6ua1          62 DLVIKTPAVRDD   73 (89)
T ss_dssp             SEEEECTTCCTT
T ss_pred             CEEEEecCcCCC
Confidence            999998888653

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.56  E-value=1.9  Score=32.31  Aligned_cols=76  Identities=8%  Similarity=-0.001  Sum_probs=41.1

Q ss_pred             EEEEEcCCCchHHHHHHH-HH-HC----CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhc
Q 019551           63 NCVVTGANAGIGYATAEG-LA-SR----GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSL  136 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~-l~-~~----G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  136 (339)
                      ++.|.||++ +|...+-. ++ ..    +.+|++.|.++++++...+........ ...... - ++..   +.+     
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~-~~~~~~-t-~~~~---~~l-----   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD-RFKVLI-S-DTFE---GAV-----   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT-SSEEEE-C-SSHH---HHH-----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhcc-CceEEE-e-cCcc---ccc-----
Confidence            367778744 55554433 22 11    458999999998877544333322221 222221 1 2221   112     


Q ss_pred             CCCCccEEEEcccccc
Q 019551          137 KNKPVHVLVNNAGVLE  152 (339)
Q Consensus       137 ~~~~id~lInnAG~~~  152 (339)
                        ..-|++|+.||...
T Consensus        70 --~~aDvVVita~~~~   83 (162)
T d1up7a1          70 --VDAKYVIFQFRPGG   83 (162)
T ss_dssp             --TTCSEEEECCCTTH
T ss_pred             --CCCCEEEEecccCC
Confidence              25799999998754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.54  E-value=0.89  Score=38.48  Aligned_cols=76  Identities=21%  Similarity=0.166  Sum_probs=53.3

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++ .++.+.+.........++.++..|+.+..          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            579999999998874   4566778897 788998774 44444554554444567899998887642          11


Q ss_pred             CCCccEEEEcc
Q 019551          138 NKPVHVLVNNA  148 (339)
Q Consensus       138 ~~~id~lInnA  148 (339)
                      ..+.|+++..-
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            24789998754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.39  E-value=1.3  Score=35.74  Aligned_cols=33  Identities=27%  Similarity=0.434  Sum_probs=28.6

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEe
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLAS-RGATVYMVC   92 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~   92 (339)
                      ++||+++|-|- |-+|..+|+.|++ .|++|+.++
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            78999999988 6799999999986 599988765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.32  E-value=0.2  Score=41.84  Aligned_cols=35  Identities=31%  Similarity=0.352  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      +.|+|+|.|| |--|...|..|+++|++|+++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 5669999999999999999999765

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.28  E-value=1.1  Score=35.81  Aligned_cols=82  Identities=18%  Similarity=0.170  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC----CccEEEEeccCCCHHHHHHHHHHHh
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTG----NENVHLELCDLSSITEIKSFANRFS  135 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~  135 (339)
                      .|.+||-.|+++|--.++.-++.....+|+.++++++-++.+.+.+.+...    ...+.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            477999999999988888777888888999999999888877777654321    235777777764211          


Q ss_pred             cCCCCccEEEEccccc
Q 019551          136 LKNKPVHVLVNNAGVL  151 (339)
Q Consensus       136 ~~~~~id~lInnAG~~  151 (339)
                      ...+..|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124789999888754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.12  E-value=0.56  Score=32.12  Aligned_cols=73  Identities=14%  Similarity=0.130  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCCchH-HHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIG-YATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG-~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      ..|++.+.|- +|+| .++|+.|.++|++|...|+......   +.+.+.  +  +.+...+-  ++.+           
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~--G--i~v~~g~~--~~~i-----------   65 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQA--G--AKIYIGHA--EEHI-----------   65 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHT--T--CEEEESCC--GGGG-----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHC--C--CeEEECCc--cccC-----------
Confidence            4578888886 5666 4679999999999999998765433   333332  2  22322221  2212           


Q ss_pred             CCccEEEEccccccC
Q 019551          139 KPVHVLVNNAGVLEN  153 (339)
Q Consensus       139 ~~id~lInnAG~~~~  153 (339)
                      ...|.+|...++...
T Consensus        66 ~~~d~vV~S~AI~~~   80 (96)
T d1p3da1          66 EGASVVVVSSAIKDD   80 (96)
T ss_dssp             TTCSEEEECTTSCTT
T ss_pred             CCCCEEEECCCcCCC
Confidence            257899988887653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=87.91  E-value=0.89  Score=34.55  Aligned_cols=78  Identities=15%  Similarity=0.065  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|+++|=.|+++|   .++..++.+|++|+.++.+++.++.+.+.++...-..++  ...|   .+.   +.........
T Consensus        41 ~g~~vLDl~~G~G---~~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v--~~~~---~d~---~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSG---AVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARV--VALP---VEV---FLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSC---HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEE--ECSC---HHH---HHHHHHHTTC
T ss_pred             CCCeEEEeccccc---hhhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccce--eeee---hhc---ccccccccCC
Confidence            5777776665544   133456678999999999999888877777654322233  2222   221   1222333445


Q ss_pred             CccEEEEcc
Q 019551          140 PVHVLVNNA  148 (339)
Q Consensus       140 ~id~lInnA  148 (339)
                      +.|+++.+.
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            799998875

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.53  E-value=0.24  Score=40.71  Aligned_cols=30  Identities=30%  Similarity=0.440  Sum_probs=27.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecC
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      |+|.|| |-.|.++|.+|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            778877 788999999999999999999875

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.44  E-value=0.24  Score=41.25  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=27.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCc
Q 019551           63 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSK   95 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~   95 (339)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3788887 7999999999999996 699998863

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.37  E-value=0.34  Score=40.96  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      .|.++|.|| |--|..+|..|+++|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            588999998 66788999999999999999987653

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.18  E-value=1.6  Score=33.64  Aligned_cols=77  Identities=16%  Similarity=0.183  Sum_probs=55.2

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +.++.||=.|++.|  . .+..|+++|++|+.++.+++.++.+.+...+. +-..+.+...|+.+..-           .
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAE-GLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEECCTTTCCC-----------C
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc-cccchhhhheecccccc-----------c
Confidence            45678999999766  3 66788999999999999998888776555443 22457778888765431           1


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +..|+++.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            468988876533

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.01  E-value=0.17  Score=39.93  Aligned_cols=31  Identities=19%  Similarity=0.213  Sum_probs=27.1

Q ss_pred             CEEEEEcCCCchHHH-----HHHHHHHCCCEEEEEe
Q 019551           62 KNCVVTGANAGIGYA-----TAEGLASRGATVYMVC   92 (339)
Q Consensus        62 k~vlITGas~gIG~a-----~a~~l~~~G~~Vvl~~   92 (339)
                      |+.+|||-+.|+|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            678999998899984     6788899999999986

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=86.77  E-value=1.5  Score=35.54  Aligned_cols=76  Identities=14%  Similarity=0.220  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+||=.|+++| +..++|+.+. .+.+|+.++++++.++.+.+.+.+.....++.+...|+.+.-           ..
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence            4789999998766 4555665553 345999999999999988888877655678999999987631           11


Q ss_pred             CCccEEEEc
Q 019551          139 KPVHVLVNN  147 (339)
Q Consensus       139 ~~id~lInn  147 (339)
                      ..+|.++.+
T Consensus       153 ~~fD~V~ld  161 (250)
T d1yb2a1         153 QMYDAVIAD  161 (250)
T ss_dssp             CCEEEEEEC
T ss_pred             ceeeeeeec
Confidence            468988865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.74  E-value=0.3  Score=38.61  Aligned_cols=31  Identities=16%  Similarity=0.172  Sum_probs=27.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788886 7778999999999999999999875

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.65  E-value=1.6  Score=31.36  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=50.9

Q ss_pred             cCCCEEEEEcCCC-c---------hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHH
Q 019551           59 IEGKNCVVTGANA-G---------IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIK  128 (339)
Q Consensus        59 l~~k~vlITGas~-g---------IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  128 (339)
                      -..|+|||.|++. -         -+...+++|.+.|++++++..|++......+      -.+++.   .+--..+.+.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------~aD~lY---fePlt~e~v~   75 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------MADATY---IEPIHWEVVR   75 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------GSSEEE---CSCCCHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------hcceee---eecCCHHHHH
Confidence            3458899999853 2         3456788888999999999999875332111      012332   2334578888


Q ss_pred             HHHHHHhcCCCCccEEEEccc
Q 019551          129 SFANRFSLKNKPVHVLVNNAG  149 (339)
Q Consensus       129 ~~~~~~~~~~~~id~lInnAG  149 (339)
                      ++++.-     ++|.++--.|
T Consensus        76 ~Ii~~E-----~pd~il~~~G   91 (127)
T d1a9xa3          76 KIIEKE-----RPDAVLPTMG   91 (127)
T ss_dssp             HHHHHH-----CCSEEECSSS
T ss_pred             HHHHHh-----CcCCeEEEee
Confidence            887764     7888876554

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=86.20  E-value=2.5  Score=32.28  Aligned_cols=78  Identities=14%  Similarity=0.158  Sum_probs=52.7

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      +.++++|=.+|++|   +++.+.+.+|+ +|+.++.+.+..+.+.+.+... ...+..++..|+         ++.+...
T Consensus        42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~-~~~~~~ii~~d~---------~~~l~~~  108 (183)
T d2fpoa1          42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNA---------MSFLAQK  108 (183)
T ss_dssp             HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCH---------HHHHSSC
T ss_pred             cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhc-cccceeeeeecc---------ccccccc
Confidence            56788876565544   34444667888 6999999999888777777643 334677777663         2233344


Q ss_pred             CCCccEEEEccc
Q 019551          138 NKPVHVLVNNAG  149 (339)
Q Consensus       138 ~~~id~lInnAG  149 (339)
                      ....|+++.+..
T Consensus       109 ~~~fDlIf~DPP  120 (183)
T d2fpoa1         109 GTPHNIVFVDPP  120 (183)
T ss_dssp             CCCEEEEEECCS
T ss_pred             ccccCEEEEcCc
Confidence            567899987753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=85.40  E-value=1.3  Score=35.26  Aligned_cols=76  Identities=20%  Similarity=0.085  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNK  139 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  139 (339)
                      .|.+||-.|+++|--   +..|++.+.+|+.+.++++..+.+.+.+. .  ..++.++..|..+--          ...+
T Consensus        70 ~g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g~----------~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLGY----------EEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCCHH---HHHHHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhcc----------hhhh
Confidence            477999999988843   33466677899999999887766655443 2  247888888875311          1125


Q ss_pred             CccEEEEccccc
Q 019551          140 PVHVLVNNAGVL  151 (339)
Q Consensus       140 ~id~lInnAG~~  151 (339)
                      +.|.++.+++..
T Consensus       134 pfD~Iiv~~a~~  145 (224)
T d1vbfa_         134 PYDRVVVWATAP  145 (224)
T ss_dssp             CEEEEEESSBBS
T ss_pred             hHHHHHhhcchh
Confidence            789998887653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.37  E-value=0.34  Score=38.58  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCCchHHH-----HHHHHHHCCCEEEEEecC
Q 019551           61 GKNCVVTGANAGIGYA-----TAEGLASRGATVYMVCRS   94 (339)
Q Consensus        61 ~k~vlITGas~gIG~a-----~a~~l~~~G~~Vvl~~r~   94 (339)
                      ||++.|+|+-||.|+.     +|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            7899999999999874     677788999999999965

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.83  E-value=1.5  Score=34.35  Aligned_cols=78  Identities=13%  Similarity=0.160  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCCCC
Q 019551           61 GKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKP  140 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  140 (339)
                      +++||=.|++.|.   .+..+++.|++|+.++.+++-++.+.+.+... +..++.++..|..+.. .         ..+.
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~~~~i~~~~~d~~~l~-~---------~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQMP-F---------TDER   81 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-CCC-S---------CTTC
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhccccc-cccccccccccccccc-c---------cccc
Confidence            6789999998883   45678888999999999988777665555443 3457889998887642 0         1257


Q ss_pred             ccEEEEcccccc
Q 019551          141 VHVLVNNAGVLE  152 (339)
Q Consensus       141 id~lInnAG~~~  152 (339)
                      .|+++.+..+.+
T Consensus        82 fD~v~~~~~l~~   93 (231)
T d1vl5a_          82 FHIVTCRIAAHH   93 (231)
T ss_dssp             EEEEEEESCGGG
T ss_pred             cccccccccccc
Confidence            999987765543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.39  E-value=0.95  Score=35.77  Aligned_cols=64  Identities=13%  Similarity=0.113  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCC
Q 019551           60 EGKNCVVTGANAG-IGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSS  123 (339)
Q Consensus        60 ~~k~vlITGas~g-IG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~  123 (339)
                      .+.+||=.|++.| +...+++.+...|++|+.++.+++-++.+.+.+.+......+.....|..+
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~  103 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH  103 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc
Confidence            3678999998755 455666655567999999999999888888777766555677777777654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.17  E-value=0.46  Score=36.05  Aligned_cols=31  Identities=26%  Similarity=0.295  Sum_probs=25.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCCEEEEE
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGATVYMV   91 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~   91 (339)
                      .++.|+|.|| |.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            3678888887 899999999999999865443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.64  E-value=0.58  Score=39.23  Aligned_cols=33  Identities=27%  Similarity=0.339  Sum_probs=22.9

Q ss_pred             CEEEEEcCCCc-h---HHHHHHHHHHCCCEEEEEecC
Q 019551           62 KNCVVTGANAG-I---GYATAEGLASRGATVYMVCRS   94 (339)
Q Consensus        62 k~vlITGas~g-I---G~a~a~~l~~~G~~Vvl~~r~   94 (339)
                      |+++|++|+.| -   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45566554433 2   457999999999999877644

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.56  E-value=2  Score=35.11  Aligned_cols=78  Identities=10%  Similarity=0.118  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASR-GATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~-G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|.+||=.|++.|   .++..|+++ |++|+.++-++.-++.+.+......-..++.++.+|..+..          -..
T Consensus        67 ~~~~vLDiGcG~G---~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----------~~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYG---GAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------CED  133 (282)
T ss_dssp             TTCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------SCT
T ss_pred             CCCEEEEeCCCCc---HHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc----------ccc
Confidence            4789999998766   245555554 88999999998877776666655543457999999987642          112


Q ss_pred             CCccEEEEcccc
Q 019551          139 KPVHVLVNNAGV  150 (339)
Q Consensus       139 ~~id~lInnAG~  150 (339)
                      +..|+++.+-.+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            579998866543

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=83.50  E-value=1.3  Score=35.74  Aligned_cols=80  Identities=15%  Similarity=0.066  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~~G~-~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +|++||=.|++.|   ..+..+++.|. +|+.+|.+++.++.+.+...+.....++.++.+|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            4789999998766   23556777775 7999999999888887777665445578899999753311         122


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      +..|+++.+-++.
T Consensus        92 ~~fD~V~~~~~l~  104 (252)
T d1ri5a_          92 KEFDVISSQFSFH  104 (252)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             ccceEEEEcceee
Confidence            4689988775544

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.44  E-value=0.23  Score=37.86  Aligned_cols=83  Identities=8%  Similarity=0.126  Sum_probs=52.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHC-CCEEE-EEecCchh-HHHHHHHH--------------HhhcCCccEEEEeccCCCHH
Q 019551           63 NCVVTGANAGIGYATAEGLASR-GATVY-MVCRSKEK-GETALSAI--------------RSKTGNENVHLELCDLSSIT  125 (339)
Q Consensus        63 ~vlITGas~gIG~a~a~~l~~~-G~~Vv-l~~r~~~~-~~~~~~~l--------------~~~~~~~~~~~~~~Dl~~~~  125 (339)
                      ++.|.|++|-+|+++++...+. ++.++ .++|.... ..+...++              ....  ..+. +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~--~~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK--DDFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT--TSCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHh--cccc-eEEEeccHH
Confidence            5899999999999999999875 66754 44443211 00000000              0000  1122 347999999


Q ss_pred             HHHHHHHHHhcCCCCccEEEEcccc
Q 019551          126 EIKSFANRFSLKNKPVHVLVNNAGV  150 (339)
Q Consensus       126 ~v~~~~~~~~~~~~~id~lInnAG~  150 (339)
                      ...+.++...+.  ++.+||-..|.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999988877666  56778877765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.22  E-value=1.5  Score=32.54  Aligned_cols=46  Identities=17%  Similarity=0.232  Sum_probs=32.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhh
Q 019551           62 KNCVVTGANAGIGYATAEGLASR--GATVYMVCRSKEKGETALSAIRSK  108 (339)
Q Consensus        62 k~vlITGas~gIG~a~a~~l~~~--G~~Vvl~~r~~~~~~~~~~~l~~~  108 (339)
                      |++.|-|+||.||..+..-+.+.  .++|+.++-+. ..+.+.+++.+.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef   50 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRT   50 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhh
Confidence            78999999999999999888775  57877665332 223344444443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.86  E-value=0.56  Score=37.56  Aligned_cols=32  Identities=28%  Similarity=0.460  Sum_probs=28.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCch
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      |+|.|| |--|..+|..|+++|++|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            688887 57789999999999999999998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.83  E-value=0.66  Score=32.79  Aligned_cols=34  Identities=15%  Similarity=0.198  Sum_probs=27.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHH---CCCEEEEEecCc
Q 019551           61 GKNCVVTGANAGIGYATAEGLAS---RGATVYMVCRSK   95 (339)
Q Consensus        61 ~k~vlITGas~gIG~a~a~~l~~---~G~~Vvl~~r~~   95 (339)
                      .|.++|.|| |.+|.++|..|.+   +|.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478889988 8999999976654   466899998864

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=82.61  E-value=1  Score=35.66  Aligned_cols=70  Identities=13%  Similarity=0.077  Sum_probs=50.0

Q ss_pred             cCCCEEEEEcCCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           59 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        59 l~~k~vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      +++++||=.|++.|   .+++.|+++|++|+.++.+++.++.+.+..     ...+.++..|+.+..           ..
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~-----~~~~~~~~~~~~~~~-----------~~   79 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL-----KDGITYIHSRFEDAQ-----------LP   79 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS-----CSCEEEEESCGGGCC-----------CS
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc-----ccccccccccccccc-----------cc
Confidence            56788999998887   456778889999999999987766554432     235778887765431           12


Q ss_pred             CCccEEEEc
Q 019551          139 KPVHVLVNN  147 (339)
Q Consensus       139 ~~id~lInn  147 (339)
                      ++.|+++..
T Consensus        80 ~~fD~I~~~   88 (225)
T d2p7ia1          80 RRYDNIVLT   88 (225)
T ss_dssp             SCEEEEEEE
T ss_pred             ccccccccc
Confidence            478988764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.46  E-value=0.42  Score=37.95  Aligned_cols=35  Identities=23%  Similarity=0.281  Sum_probs=29.3

Q ss_pred             CEEEEEcCCCchHHH-----HHHHHHHCCCEEEEEecCch
Q 019551           62 KNCVVTGANAGIGYA-----TAEGLASRGATVYMVCRSKE   96 (339)
Q Consensus        62 k~vlITGas~gIG~a-----~a~~l~~~G~~Vvl~~r~~~   96 (339)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            689999999998874     57788899999999987643

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.30  E-value=0.58  Score=38.90  Aligned_cols=31  Identities=29%  Similarity=0.549  Sum_probs=27.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHCCCEEEEEecCc
Q 019551           64 CVVTGANAGIGYATAEGLASRGATVYMVCRSK   95 (339)
Q Consensus        64 vlITGas~gIG~a~a~~l~~~G~~Vvl~~r~~   95 (339)
                      |+|.|| |..|...|..|+++|++|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 7889999999999999999998754

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.97  E-value=1.4  Score=35.90  Aligned_cols=73  Identities=11%  Similarity=0.013  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcC
Q 019551           60 EGKNCVVTGAN-AGIGYATAEGLASRG-ATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLK  137 (339)
Q Consensus        60 ~~k~vlITGas-~gIG~a~a~~l~~~G-~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  137 (339)
                      .|++||-.||+ |+++..+|    +.| ++|+.++.|++..+.+.+.+....-..++.++..|..+..           .
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~-----------~  171 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----------G  171 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------C
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc-----------c
Confidence            58999999876 44555544    345 5999999999988877777765433457899999976531           1


Q ss_pred             CCCccEEEEc
Q 019551          138 NKPVHVLVNN  147 (339)
Q Consensus       138 ~~~id~lInn  147 (339)
                      .+..|.+|.|
T Consensus       172 ~~~~D~Ii~~  181 (260)
T d2frna1         172 ENIADRILMG  181 (260)
T ss_dssp             CSCEEEEEEC
T ss_pred             CCCCCEEEEC
Confidence            2467887754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=80.93  E-value=0.14  Score=38.31  Aligned_cols=37  Identities=16%  Similarity=0.165  Sum_probs=26.1

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 019551           69 ANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAI  105 (339)
Q Consensus        69 as~gIG~a~a~~l~~~G~~Vvl~~r~~~~~~~~~~~l  105 (339)
                      |+|-+|+++++.|.+.+..+.+.+|++++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            4588999999988654333458899999888776654

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.89  E-value=2.2  Score=33.83  Aligned_cols=82  Identities=12%  Similarity=0.072  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-CC----CEEEEEecCchhHHHHHHHHHhh----cCCccEEEEeccCCCHHHHHHH
Q 019551           60 EGKNCVVTGANAGIGYATAEGLAS-RG----ATVYMVCRSKEKGETALSAIRSK----TGNENVHLELCDLSSITEIKSF  130 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~-~G----~~Vvl~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~  130 (339)
                      .|.+||..|+++|--.++.-+++. .|    .+|+.+.++++-.+...+.+...    .+-.++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            478999999999988877777764 44    48999999988777665554322    12236888888875311     


Q ss_pred             HHHHhcCCCCccEEEEccccc
Q 019551          131 ANRFSLKNKPVHVLVNNAGVL  151 (339)
Q Consensus       131 ~~~~~~~~~~id~lInnAG~~  151 (339)
                           ...++.|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1235789998888754

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=80.65  E-value=3  Score=33.09  Aligned_cols=78  Identities=18%  Similarity=0.078  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCccEEEEeccCCCHHHHHHHHHHHhcCC
Q 019551           60 EGKNCVVTGANAGIGYATAEGLAS-RGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKN  138 (339)
Q Consensus        60 ~~k~vlITGas~gIG~a~a~~l~~-~G~~Vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  138 (339)
                      .|++||=.|++.|   .++..+++ .|++|+.++-++.-++...+.......+.++.++..|+.+..           ..
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~-----------~~   98 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-----------AN   98 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----------CS
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc-----------cc
Confidence            4789998998777   34555655 489999999998877766665555444457999999987531           12


Q ss_pred             CCccEEEEccccc
Q 019551          139 KPVHVLVNNAGVL  151 (339)
Q Consensus       139 ~~id~lInnAG~~  151 (339)
                      ++.|.++..-.+.
T Consensus        99 ~~fD~v~~~~~~~  111 (245)
T d1nkva_          99 EKCDVAACVGATW  111 (245)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             CceeEEEEEehhh
Confidence            4789887665443