Citrus Sinensis ID: 019578

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcEEEEEccccccccccccEEEEcEEcccccEEEEEccEEccccccccccccccccccccEEEEEEccEEEccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHHHccccccccccEEEEEccccccccccccccccccccccHHHHHHHcccccccccccccccccEEEEEEEEEEcccccccEEEccccccccccccccccccHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHcccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccEEEEEEEccccEEEEEcccEEEccHHHccccccccccccccEEEEEEccEEEEcccccccccEEEEcccccccccccccccccccccHHHHHcccccccccccccHHHHHccccHHHHHHcccccccccccEEEEEccccccHHHHHHHcccEEEccccccccccccccHccccccccccccEEEEEEEEEEHcccccHHHEEcccccccccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
magkaslsdQQQQVLDNIHSQIKRFCLSMDEilllpeknvpiessaqsnaaprrsglsfavgptarptdspvvpqtrqLTRTELSQRLKDAIGytldlkpsqipheeagqglflcgeanvgaviaiypgiiyspayyryipgyprvdaqnpylitrydgtvinaqpwgsgwdtrelwdgltlpeimpnskgaekGSDQFWKLLskpmdnkrggsgsemlerrnplalahfanhpakgmvpnvmicpydfpltekdmrpyipnisfgnaeevNMRRFGSFwfkwgsgsgsstpvLKTLALVATRAICDEEVLLNYRlsnskrrpvwyspvdeeedrrrws
Flexible Loop (DISEMBL)
magkaslsdqqQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIEssaqsnaaprrsGLSFAVgptarptdspvvpqtrqlTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTvinaqpwgsgwDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFAnhpakgmvpnVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLlnyrlsnskrrpvwyspvdeeedrrrws
Low Complexity Region (SEG)
MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRfgsfwfkwgsgsgssTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Disordered region (IsUnstruct)
**************LDNIHSQIKRFCLSMDEILLLP*****************************************************DAIGYTLDLKP*QIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEI***************************************LALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWY*************
Disordered Region (DISOPRED)
*****S******QVLDNIHSQIKRFCLSMDEI*****************************************************QRLKDAIGYTLDLKPSQ*PHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPE********************************EMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWF*********TPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEE*******
Disordered Region (DISEMBL)
***********QQVLDNIHSQIKRFCLSMDEILLLPEKNVPIE************GLSFAVGP*************RQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDN*********LERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYS************
Disordered Region (DISPRO)
*****SLSDQQQQVLDNIHSQIKRFCLSMDEILLLP****************************************RQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNS*****GSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEED*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q5RBW0	273	SET domain-containing pro	yes	no	0.374	0.465	0.257	0.0007
Q8NE22	299	SET domain-containing pro	yes	no	0.401	0.454	0.25	0.0008

>sp|Q5RBW0|SETD9_PONAB SET domain-containing protein 9 OS=Pongo abelii GN=SETD9 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 36/163 (22%)

Query: 108 AGQGLFLC-GEANVGAVIAIYPGII---YSPAYYRYIPGYPRVDAQNPYLITRYDGTVIN 163
           AG+G+F+  G    GAV+++YPG +   Y P +++ I         NP++    DG +I+
Sbjct: 108 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSIG--------NPFIFRCLDGVLID 159

Query: 164 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 223
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 160 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 196

Query: 224 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISF 265
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++
Sbjct: 197 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAY 239

Pongo abelii (taxid: 9601)

>sp|Q8NE22|SETD9_HUMAN SET domain-containing protein 9 OS=Homo sapiens GN=SETD9 PE=2 SV=2

 Score = 45.1 bits (105), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 108 AGQGLFLC-GEANVGAVIAIYPGIIYS---PAYYRYIPGYPRVDAQNPYLITRYDGTVIN 163
           AG+G+F+  G    GAV+++YPG +Y    P +++ I         NP++    DG +I+
Sbjct: 134 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSIG--------NPFIFRCLDGVLID 185

Query: 164 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 223
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 186 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 222

Query: 224 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISFGNAEEVNMR 274
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++   ++  +R
Sbjct: 223 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAYSYDKQSPLR 274

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
224083904	402	predicted protein [Populus trichocarpa]	1.0	0.843	0.733	1e-148
225465688	405	PREDICTED: uncharacterized protein LOC10	1.0	0.837	0.721	1e-146
147812456	345	hypothetical protein VITISV_003407 [Viti	1.0	0.982	0.721	1e-144
255558659	405	conserved hypothetical protein [Ricinus	1.0	0.837	0.681	1e-134
449464032	396	PREDICTED: uncharacterized protein LOC10	0.967	0.828	0.689	1e-133
297808317	398	hypothetical protein ARALYDRAFT_489175 [	0.988	0.841	0.652	1e-128
22327005	399	uncharacterized protein [Arabidopsis tha	0.994	0.844	0.642	1e-127
10177809	437	unnamed protein product [Arabidopsis tha	0.994	0.771	0.642	1e-127
102139939	592	hypothetical protein MA4_54B05.28 [Musa	0.988	0.565	0.648	1e-126
356532231	402	PREDICTED: uncharacterized protein LOC10	0.988	0.833	0.664	1e-125

>gi|224083904|ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|222856616|gb|EEE94163.1| predicted protein [Populus trichocarpa]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/342 (73%), Positives = 292/342 (85%), Gaps = 3/342 (0%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILL--LPEKNVPIESSAQSNAAPRRSGLS 58
           MA KAS++DQQ+QV +NIH QI  FC +M+EILL  L +++   E+ AQSNAAPRRSGLS
Sbjct: 61  MASKASVADQQKQVQENIHFQITNFCSAMNEILLPDLEKRSKKDEAPAQSNAAPRRSGLS 120

Query: 59  FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           FAVG +  P D P +P+T+QL+R+++SQ L+D IGYTLDLKPS IPH+EAG+GLFL GEA
Sbjct: 121 FAVGKSGPPIDRPAIPETKQLSRSKVSQSLRDEIGYTLDLKPSLIPHKEAGEGLFLSGEA 180

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VG VIAIYPG+IYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINA PWGSG ++RE+WD
Sbjct: 181 DVGTVIAIYPGVIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINALPWGSGGESREVWD 240

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           GLT+PEI  N +  EKG D+ W++LSKP++  R GS  ++LERRNPLALAHFANHPAKGM
Sbjct: 241 GLTVPEIRSNVQSVEKGQDRVWRMLSKPLEGTRVGSIGDVLERRNPLALAHFANHPAKGM 300

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGS-GSGSSTPVLKTL 297
            PNVMICPYDFPLTEKDMR +IPN+SFGN EEVNMRRFGSFWFK  +  S S  PVLKTL
Sbjct: 301 DPNVMICPYDFPLTEKDMRTFIPNVSFGNHEEVNMRRFGSFWFKSSAKNSVSDVPVLKTL 360

Query: 298 ALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
            LVATRA+C+EEVLLNYRLSN+KRRP WYSPVDEEEDRRRWS
Sbjct: 361 VLVATRALCNEEVLLNYRLSNTKRRPAWYSPVDEEEDRRRWS 402

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465688|ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251105 [Vitis vinifera]

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/345 (72%), Positives = 287/345 (83%), Gaps = 6/345 (1%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPI--ESSAQSNAAPRRSGLS 58
           MAGKASL+DQQ+QV +NIHSQIK FC ++D +LL   KN+    ES  Q+ A PRRSGLS
Sbjct: 61  MAGKASLADQQKQVQENIHSQIKTFCNTLDGVLLPDSKNMNELPESCPQTKATPRRSGLS 120

Query: 59  FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           FAVG    P+D+  VPQT+ L R ELSQ LKD IGYTLDLKPSQIPH++AGQGLFL GEA
Sbjct: 121 FAVGRDGPPSDNSAVPQTKPLKRAELSQSLKDLIGYTLDLKPSQIPHKDAGQGLFLDGEA 180

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VGAV+A+YPG+IY PAYY+YIPGYPRVDA NPYLITRYDGTVINAQPWG G +TRELWD
Sbjct: 181 DVGAVVALYPGVIYFPAYYQYIPGYPRVDAHNPYLITRYDGTVINAQPWGVGGETRELWD 240

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           G ++ E+  N +G EKGSD+ WKLLSKPM+ K GGSG ++LERRNPLA AHFANHP+KGM
Sbjct: 241 GFSVTEVSANMQGDEKGSDRIWKLLSKPMEAKHGGSGCDVLERRNPLAFAHFANHPSKGM 300

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSS----TPVL 294
            PNVM+CPYDFPLTE+DMR YIPN+ FG+++EV M+R GSFWFK GS + S      PVL
Sbjct: 301 SPNVMVCPYDFPLTEQDMRAYIPNVLFGSSKEVKMKRLGSFWFKSGSSNKSELDAHVPVL 360

Query: 295 KTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           KTL LVATRA+CDEEVLLNYRLSNSKRRP WY+PVDEEEDRRRWS
Sbjct: 361 KTLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRWS 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812456|emb|CAN77337.1| hypothetical protein VITISV_003407 [Vitis vinifera]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/345 (72%), Positives = 286/345 (82%), Gaps = 6/345 (1%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPI--ESSAQSNAAPRRSGLS 58
           MAGKASL+DQQ+QV +NIHSQIK FC ++D +LL   KN+    ES  Q+ A PRRSGLS
Sbjct: 1   MAGKASLADQQKQVQENIHSQIKTFCNTLDXVLLPDSKNMNELPESCPQTKAXPRRSGLS 60

Query: 59  FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           FAVG    P D+  VPQT+ L R ELSQ LKD IGYTLDLKPSQIPH++AGQGLFL GEA
Sbjct: 61  FAVGRDGPPXDNSAVPQTKPLKRAELSQSLKDLIGYTLDLKPSQIPHKDAGQGLFLDGEA 120

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VGAV+A+YPG+IY PAYY+YIPGYPRVDA NPYLITRYDGTVINAQPWG G +TRELWD
Sbjct: 121 DVGAVVALYPGVIYFPAYYQYIPGYPRVDAHNPYLITRYDGTVINAQPWGVGGETRELWD 180

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           G ++ E+  N +GAEKGSD+ WKLLSKPM++K  GSG ++LERRNPLA AHFANHP+KGM
Sbjct: 181 GFSVTEVSANMQGAEKGSDRIWKLLSKPMESKHRGSGCDVLERRNPLAFAHFANHPSKGM 240

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSS----TPVL 294
            PNVM+CPYDFPLTE+DMR YIPN+ FG++ EV M+R GSFWFK GS + S      PVL
Sbjct: 241 SPNVMVCPYDFPLTEQDMRAYIPNVLFGSSXEVKMKRXGSFWFKSGSSNKSELDAHVPVL 300

Query: 295 KTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           KTL LVATRA+CDEEVLLNYRLSNSKRRP WY+PVDEEEDRRRWS
Sbjct: 301 KTLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRWS 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558659|ref|XP_002520354.1| conserved hypothetical protein [Ricinus communis] gi|223540452|gb|EEF42020.1| conserved hypothetical protein [Ricinus communis]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/342 (68%), Positives = 278/342 (81%), Gaps = 3/342 (0%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILL--LPEKNVPIESSAQSNAAPRRSGLS 58
           MA  +S++DQQ QV +NIHSQI+ FC SMDEILL  + ++N   E+ AQ +  PRRSGLS
Sbjct: 64  MASTSSVTDQQNQVQENIHSQIESFCTSMDEILLPDMMKRNELGEALAQLDPVPRRSGLS 123

Query: 59  FAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
            AVG +   T  P + +TR L   E+S RLK  IGYTL+LKPSQIPH+EAGQGLF+ GEA
Sbjct: 124 LAVGKSTPSTGCPAITETRPLKSGEVSSRLKGLIGYTLNLKPSQIPHKEAGQGLFIDGEA 183

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VG+VIA YPG+IY+PAYYRYIPGYPRVDA NPYLITRYDGTVINAQPWG G +TRE W+
Sbjct: 184 DVGSVIAFYPGVIYAPAYYRYIPGYPRVDACNPYLITRYDGTVINAQPWGFGGETREAWN 243

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           GL +P++  + +  EKG D++WK+LSKP++    GS +E+LE+RNPLALAHFANHPAK +
Sbjct: 244 GLLVPDVRHSVQIREKGVDRWWKMLSKPLEGTEFGSAAEVLEQRNPLALAHFANHPAKDI 303

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFK-WGSGSGSSTPVLKTL 297
            PNVMICPYDFPLTEK+MR YIPNI FGN+EEVNMRRFGSFWF+    GSGS  P+LK L
Sbjct: 304 APNVMICPYDFPLTEKNMRTYIPNIIFGNSEEVNMRRFGSFWFRSKAKGSGSGIPILKAL 363

Query: 298 ALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
            LVATRA+ +EEVLLNYRLS+SKRRP WY+PVDEEEDRRRWS
Sbjct: 364 VLVATRALSNEEVLLNYRLSHSKRRPEWYTPVDEEEDRRRWS 405

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464032|ref|XP_004149733.1| PREDICTED: uncharacterized protein LOC101219994 [Cucumis sativus]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/341 (68%), Positives = 276/341 (80%), Gaps = 13/341 (3%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
           MA KAS +DQQ+QV +NIHSQ+K FC+ MD ILL  E   P ES  +S  A R+SGLSFA
Sbjct: 67  MASKASFADQQKQVQENIHSQVKSFCMHMDGILLPDE---PAESPEKSKDAVRKSGLSFA 123

Query: 61  VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV 120
           VG T        +P TR L R+ELSQ+LKD IGYTLD+KPS+IPH++AGQGLF+ GEA+V
Sbjct: 124 VGRTN------TIPTTRPLGRSELSQQLKDEIGYTLDIKPSRIPHKDAGQGLFIDGEADV 177

Query: 121 GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGL 180
           G++IAIYPG++YSPA+Y+YIPGYPRVDAQNPYLITRYDGTVINAQPWG G DTRE+W GL
Sbjct: 178 GSIIAIYPGVVYSPAHYQYIPGYPRVDAQNPYLITRYDGTVINAQPWGLGADTREVWHGL 237

Query: 181 TLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVP 240
           T+P   P  +G EK SD+ W++LSKP++ KR   G + +ERRNPLA AHFANHPAK MVP
Sbjct: 238 TVPNSNPTKQGDEK-SDRLWRMLSKPLEAKRVQHGGDAIERRNPLAFAHFANHPAKDMVP 296

Query: 241 NVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSG--SGSSTPVLKTLA 298
           NVM+CPYDFPLTEKDMR YIPN+   N EEV M+RFGSFWFK G    +GS TP+LKT+ 
Sbjct: 297 NVMLCPYDFPLTEKDMRVYIPNVPVAN-EEVGMKRFGSFWFKSGRSRINGSDTPILKTIV 355

Query: 299 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           LVATRA+C+EEVLLNYRLSNSKRRP WY+PVDE EDRRRWS
Sbjct: 356 LVATRALCNEEVLLNYRLSNSKRRPSWYTPVDEGEDRRRWS 396

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808317|ref|XP_002872042.1| hypothetical protein ARALYDRAFT_489175 [Arabidopsis lyrata subsp. lyrata] gi|297317879|gb|EFH48301.1| hypothetical protein ARALYDRAFT_489175 [Arabidopsis lyrata subsp. lyrata]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/342 (65%), Positives = 273/342 (79%), Gaps = 7/342 (2%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAP-RRSGLSF 59
           MAGKA+LS+QQ+QV +NIH Q++ FC  MD ILL   +N   ES +QS + P RRSGL+F
Sbjct: 61  MAGKATLSEQQKQVQENIHYQVENFCSLMDGILLPDVRNN--ESGSQSTSPPPRRSGLTF 118

Query: 60  AVGPT-ARPT-DSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGE 117
           A+G   A P  D+P+VP+T+ L   E+SQRL D +GYTL++KPS IPH++AGQG F+ GE
Sbjct: 119 AIGSNNAFPAADTPLVPETKPLKLNEVSQRLMDQMGYTLEIKPSVIPHKDAGQGCFIKGE 178

Query: 118 ANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELW 177
           A+VG V+A YPG+IYSPA+YRYIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE+W
Sbjct: 179 ADVGTVLAFYPGVIYSPAFYRYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREVW 238

Query: 178 DGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKG 237
           +G   P +  NSK AE GSD+ WK LSKP++    G   ++LERRNPLA  H ANHPAK 
Sbjct: 239 NGSYTPAVKANSKAAENGSDRLWKALSKPLEG--SGEAKDVLERRNPLAFGHLANHPAKE 296

Query: 238 MVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTL 297
           M PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL
Sbjct: 297 MTPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTL 356

Query: 298 ALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
            LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 357 VLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 398

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327005|ref|NP_197711.2| uncharacterized protein [Arabidopsis thaliana] gi|18491157|gb|AAL69481.1| unknown protein [Arabidopsis thaliana] gi|20258933|gb|AAM14182.1| unknown protein [Arabidopsis thaliana] gi|332005749|gb|AED93132.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/341 (64%), Positives = 268/341 (78%), Gaps = 4/341 (1%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
           MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct: 61  MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 120

Query: 61  VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct: 121 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 180

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct: 181 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 240

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct: 241 GSYTPAVKANTKTAENGSDRLWKALSKPLEG--SGKGKEVLERRNPLAFGHLANHPAKEM 298

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLA 298
            PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL 
Sbjct: 299 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 358

Query: 299 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 359 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177809|dbj|BAB11175.1| unnamed protein product [Arabidopsis thaliana]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/341 (64%), Positives = 268/341 (78%), Gaps = 4/341 (1%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
           MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct: 99  MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 158

Query: 61  VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct: 159 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 218

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct: 219 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 278

Query: 179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
           G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct: 279 GSYTPAVKANTKTAENGSDRLWKALSKPLEG--SGKGKEVLERRNPLAFGHLANHPAKEM 336

Query: 239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLA 298
            PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+RFGSFWFK GS +G   PVLKTL 
Sbjct: 337 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 396

Query: 299 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct: 397 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 437

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|102139939|gb|ABF70082.1| hypothetical protein MA4_54B05.28 [Musa acuminata]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/341 (64%), Positives = 261/341 (76%), Gaps = 6/341 (1%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSA---QSNAAPRRSGL 57
           MA KAS+ DQQ+QV +NIH QIK  C  MDEIL +  KN+P   S+     N   RRSGL
Sbjct: 228 MANKASVKDQQKQVQENIHFQIKNMCKIMDEILRVDNKNIPDPPSSIPCSQNGPRRRSGL 287

Query: 58  SFAVGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGE 117
           SFA+G      + PVVP T+ LTR+ELS  L D +GY  D+KPSQIPHEEAGQGLFL GE
Sbjct: 288 SFAIGKGTPSANEPVVPTTQPLTRSELSHCLMDRLGYAPDIKPSQIPHEEAGQGLFLNGE 347

Query: 118 ANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELW 177
           A+VGA+IA YPG+IYSPAYYRYIPGYPRVDA N YLITRYDG VINAQPWGSG +TRELW
Sbjct: 348 ADVGAIIAFYPGMIYSPAYYRYIPGYPRVDASNSYLITRYDGNVINAQPWGSGGETRELW 407

Query: 178 DGLTLPEIMPN-SKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAK 236
           DG   P+  P+ S+   +GSD+ W++LSKP++    G+  E+LERRNPLA  HFANHP K
Sbjct: 408 DGFYHPQYNPDTSEETGRGSDRMWRMLSKPLEASNRGTIGEVLERRNPLAFGHFANHPPK 467

Query: 237 GMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGS--GSSTPVL 294
           G+ PNVM+CPYDFPLTEKDMR YIPN+ +G+ E + MRRFG+FWF+ GS       +PVL
Sbjct: 468 GIAPNVMVCPYDFPLTEKDMRVYIPNLIYGDEESITMRRFGTFWFRLGSSVDPDGDSPVL 527

Query: 295 KTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDR 335
           KTL LVATRA+C+EEV LNYRLSN KRRP WY+PVDEEED+
Sbjct: 528 KTLVLVATRALCNEEVFLNYRLSNQKRRPAWYTPVDEEEDK 568

Source: Musa acuminata

Species: Musa acuminata

Genus: Musa

Family: Musaceae

Order: Zingiberales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532231|ref|XP_003534677.1| PREDICTED: uncharacterized protein LOC100782005 [Glycine max]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/346 (66%), Positives = 267/346 (77%), Gaps = 11/346 (3%)

Query: 1   MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
           MA KAS +DQQ QV +N+HSQIK FC  MDEILL  EK V        N  PRRSGL FA
Sbjct: 61  MASKASFADQQMQVQENVHSQIKTFCTFMDEILLPNEKMV--NEHQLQNTVPRRSGLGFA 118

Query: 61  VGPTARP--TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
           VG    P        P+TR L++  +SQ LKD +GYT+++ PSQIPH++AGQGLFL G  
Sbjct: 119 VGSRNDPPLAFGAASPKTRPLSQAVVSQNLKDQLGYTVNVTPSQIPHKDAGQGLFLDGTV 178

Query: 119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
           +VGAV+A YPGI+YSPAYYRYIPGYP+VD  NPYLITRYDG VINAQPWGSG D RELW+
Sbjct: 179 DVGAVVAFYPGIVYSPAYYRYIPGYPKVDTLNPYLITRYDGNVINAQPWGSGGDNRELWN 238

Query: 179 GLTLPEIMPNSKGA--EKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAK 236
           G    EI P+ KGA  EKGS++FWKLLSKP++  +GG+ +E++ERRNPLALAHFANHP K
Sbjct: 239 GRKTGEIKPDVKGAEPEKGSERFWKLLSKPLEGYQGGN-NEVIERRNPLALAHFANHPPK 297

Query: 237 GMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFK---WGSGSGSSTPV 293
           G+ PNVMICPYDFPLTE +MR YIPN+ FGNA EVNMRRFGSFWFK       SGS+ P 
Sbjct: 298 GVQPNVMICPYDFPLTESNMRVYIPNVLFGNA-EVNMRRFGSFWFKSGGGSRNSGSNVPT 356

Query: 294 LKTLALVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
           LKTL L+ATR + DEE+ LNYRLSN+KRRP WY+PVDEEEDRRRWS
Sbjct: 357 LKTLVLIATRPLQDEELFLNYRLSNTKRRPEWYNPVDEEEDRRRWS 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2166801	399	AT5G23200 "AT5G23200" [Arabido	0.994	0.844	0.612	1.4e-112
TAIR|locus:2181519	386	AT5G08270 "AT5G08270" [Arabido	0.941	0.826	0.546	1.3e-91

TAIR|locus:2166801 AT5G23200 "AT5G23200" [Arabidopsis thaliana (taxid:3702)]

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 209/341 (61%), Positives = 257/341 (75%)

Query:     1 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
             MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct:    61 MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 120

Query:    61 VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 118
             +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct:   121 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 180

Query:   119 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 178
             +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct:   181 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 240

Query:   179 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 238
             G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct:   241 GSYTPAVKANTKTAENGSDRLWKALSKPLEGS--GKGKEVLERRNPLAFGHLANHPAKEM 298

Query:   239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 298
              PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+R                PVLKTL 
Sbjct:   299 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 358

Query:   299 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 339
             LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct:   359 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181519 AT5G08270 "AT5G08270" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 182/333 (54%), Positives = 231/333 (69%)

Query:     1 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 60
             MAGKA+ S+QQ+QV +NIH Q++ FC SM+EILL    N  I+ +   N     S     
Sbjct:    66 MAGKATFSEQQKQVQENIHYQLQNFCSSMNEILLT---N--IDKTKDLNEPGSESRRDNI 120

Query:    61 VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV 120
             V P A   D P+VP+T+ L   E+S RLKD +GYTL++KPS IPH++AGQG F+ GEA+V
Sbjct:   121 V-PAA---DKPIVPETKPLKLDEVSHRLKDRVGYTLEIKPSLIPHKDAGQGCFIEGEADV 176

Query:   121 GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDG- 179
             GAV+A YPG+IYSPA++RYIPGYP VDAQN YLIT YDGTVINAQPWG G  +RE+W+G 
Sbjct:   177 GAVLAFYPGVIYSPAFHRYIPGYPNVDAQNSYLITGYDGTVINAQPWGRGGISREVWNGS 236

Query:   180 LTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSE-MLERRNPLALAHFANHPAKGM 238
              T PEI   +   E  SD+ WK+LS+P++   G  G E ++E RNPLA  HF NHP K M
Sbjct:   237 FTTPEIRTEATTTENSSDKVWKMLSRPLE---GSGGVEAVIEMRNPLAFGHFINHPGKEM 293

Query:   239 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 298
               NVMICPYDF L+E +MR YIPN++FGN  +V M R                 VLKT+ 
Sbjct:   294 ESNVMICPYDFLLSETEMRAYIPNVAFGNTGDVKMGRFESFLSRTGSNSSLDAHVLKTIV 353

Query:   299 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDE 331
             LVAT+A+C+EE++LNYRLSNS++R  WY P+DE
Sbjct:   354 LVATKALCNEELMLNYRLSNSEKRLEWYIPLDE 386


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      339       324   0.00086  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  229 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.21u 0.14s 27.35t   Elapsed:  00:00:01
  Total cpu time:  27.21u 0.14s 27.35t   Elapsed:  00:00:01
  Start:  Thu May  9 18:22:52 2013   End:  Thu May  9 18:22:53 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_V000132 hypothetical protein (402 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
KOG1079	739	consensus Transcriptional repressor EZH1 [Transcri	98.89
smart00317	116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	98.85
KOG1080	1005	consensus Histone H3 (Lys4) methyltransferase comp	96.64
KOG1082	364	consensus Histone H3 (Lys9) methyltransferase SUV3	95.18
KOG2461	396	consensus Transcription factor BLIMP-1/PRDI-BF1, c	94.07
PF00856	162	SET: SET domain; InterPro: IPR001214 The SET domai	93.54
KOG1085	392	consensus Predicted methyltransferase (contains a	89.14
KOG4442	729	consensus Clathrin coat binding protein/Huntingtin	86.46

>KOG1079 consensus Transcriptional repressor EZH1 [Transcription]

Probab=98.89  E-value=4e-09  Score=110.69  Aligned_cols=126  Identities=29%  Similarity=0.334  Sum_probs=91.9

Q ss_pred             EEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCC-CeeeeecCCeEEecCCCCCCCCc
Q 019578           95 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQN-PYLITRYDGTVINAQPWGSGWDT  173 (339)
Q Consensus        95 s~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N-~Yli~r~DG~vIDg~~wg~gg~s  173 (339)
                      .+.+++|.|    ||.|+|+|-.|.++++|+.|.|.+-+..-...- |- ..|..+ +|||-.+++.|||++-.|     
T Consensus       595 r~llapSdV----aGwGlFlKe~v~KnefisEY~GE~IS~dEADrR-Gk-iYDr~~cSflFnln~dyviDs~rkG-----  663 (739)
T KOG1079|consen  595 RVLLAPSDV----AGWGLFLKESVSKNEFISEYTGEIISHDEADRR-GK-IYDRYMCSFLFNLNNDYVIDSTRKG-----  663 (739)
T ss_pred             ceeechhhc----cccceeeccccCCCceeeeecceeccchhhhhc-cc-ccccccceeeeeccccceEeeeeec-----
Confidence            489999987    579999999999999999999998873211100 00 013334 799999999999999553     


Q ss_pred             ccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCc
Q 019578          174 RELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTE  253 (339)
Q Consensus       174 r~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~  253 (339)
                                                                          .++|||||-.   .||..+.-+=++-  
T Consensus       664 ----------------------------------------------------nk~rFANHS~---nPNCYAkvm~V~G--  686 (739)
T KOG1079|consen  664 ----------------------------------------------------NKIRFANHSF---NPNCYAKVMMVAG--  686 (739)
T ss_pred             ----------------------------------------------------chhhhccCCC---CCCcEEEEEEecC--
Confidence                                                                1368999987   5887776654441  


Q ss_pred             ccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccCCCC------CCCCcc
Q 019578          254 KDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK------RRPVWY  326 (339)
Q Consensus       254 ~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~------~~P~WY  326 (339)
                                                              -+=+.+.|.|+| .|||||.+|||++..      .-++||
T Consensus       687 ----------------------------------------dhRIGifAkRaIeagEELffDYrYs~~~~~k~~~~~~~s~  726 (739)
T KOG1079|consen  687 ----------------------------------------DHRIGIFAKRAIEAGEELFFDYRYSPEHALKFVGIERESY  726 (739)
T ss_pred             ----------------------------------------CcceeeeehhhcccCceeeeeeccCccccccccccCcccc
Confidence                                                    122347899999 889999999999865      234666


Q ss_pred             cc
Q 019578          327 SP  328 (339)
Q Consensus       327 ~p  328 (339)
                      .+
T Consensus       727 k~  728 (739)
T KOG1079|consen  727 KV  728 (739)
T ss_pred             cc
Confidence            54

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

Probab=98.85  E-value=1.4e-08  Score=79.89  Aligned_cols=32  Identities=22%  Similarity=0.250  Sum_probs=28.8

Q ss_pred             CCCceeEEeeecCCCcEEEEecCeeeCccccc
Q 019578          107 EAGQGLFLCGEANVGAVIAIYPGIIYSPAYYR  138 (339)
Q Consensus       107 ~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~  138 (339)
                      ++|.|||++-.+++|++|.-|+|.+..+....
T Consensus         9 ~~G~gl~a~~~i~~g~~i~~~~g~~~~~~~~~   40 (116)
T smart00317        9 GKGWGVRATEDIPKGEFIGEYVGEIITSEEAE   40 (116)
T ss_pred             CCcEEEEECCccCCCCEEEEEEeEEECHHHHH
Confidence            99999999999999999999999999864443

Putative methyl transferase, based on outlier plant homologues

>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription]

Probab=96.64  E-value=0.0068  Score=67.68  Aligned_cols=68  Identities=28%  Similarity=0.414  Sum_probs=51.2

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCc--ccccccCCCCCCCCCCCeeeeecCCeEEecCCCC
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSP--AYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWG  168 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p--~~~~~ipgyP~vd~~N~Yli~r~DG~vIDg~~wg  168 (339)
                      |.-.+|.|.    |-|||+.+.+.+|.-|--|=|.++.+  +=+|-+ .|=+.-..-.|||+-=|++||||...|
T Consensus       868 ~~F~~s~iH----~wglfa~~~i~~~dmViEY~Ge~vR~~iad~RE~-~Y~~~gi~~sYlfrid~~~ViDAtk~g  937 (1005)
T KOG1080|consen  868 VKFGRSGIH----GWGLFAMENIAAGDMVIEYRGELVRSSIADLREA-RYERMGIGDSYLFRIDDEVVVDATKKG  937 (1005)
T ss_pred             hcccccccc----ccceeeccCccccceEEEeeceehhhhHHHHHHH-HHhccCcccceeeecccceEEeccccC
Confidence            677889885    78999999999999999999999984  112221 222223356799987789999999653

>KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription]

Probab=95.18  E-value=0.057  Score=53.61  Aligned_cols=148  Identities=20%  Similarity=0.238  Sum_probs=89.0

Q ss_pred             hCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecCCeEEecCCCCCCC
Q 019578           92 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGW  171 (339)
Q Consensus        92 lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~DG~vIDg~~wg~gg  171 (339)
                      +=|.|.|-.+  +  ..|=||-..-.+++|+-|+-|.|.+-+-.-.+...      ..+.|++...|++.+.-.+|..  
T Consensus       174 ~~~~leIfrt--~--~kGwgvRs~~~I~~G~fvcEyaGe~~t~~e~~~~~------~~~~~~~~~~~~~~~~~~~~~~--  241 (364)
T KOG1082|consen  174 LQFHLEVFRT--P--EKGWGVRTLDPIPAGEFVCEYAGEVLTSEEAQRRT------HLREYLDDDCDAYSIADREWVD--  241 (364)
T ss_pred             cccceEEEec--C--CceeeecccccccCCCeeEEEeeEecChHHhhhcc------ccccccccccccchhhhccccc--
Confidence            4445555554  2  36777777678999999999999998854444331      2456766555655555454421  


Q ss_pred             CcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCC
Q 019578          172 DTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPL  251 (339)
Q Consensus       172 ~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~  251 (339)
                         +.+.+.            .....+++...+.+          ..+...+=-.+|+|+||-   -+|||+++.+-.  
T Consensus       242 ---~~~~~~------------~~~~~~~~~~~~~~----------~~ida~~~GNv~RfinHS---C~PN~~~~~v~~--  291 (364)
T KOG1082|consen  242 ---ESPVGN------------TFVAPSLPGGPGRE----------LLIDAKPHGNVARFINHS---CSPNLLYQAVFQ--  291 (364)
T ss_pred             ---cccccc------------cccccccccCCCcc----------eEEchhhcccccccccCC---CCccceeeeeee--
Confidence               111110            01111111111110          223455556788999997   579999987711  


Q ss_pred             CcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccC
Q 019578          252 TEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  317 (339)
Q Consensus       252 ~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  317 (339)
                                    +  +                    ..+.+--++|.|+++| ..|||=++|-..
T Consensus       292 --------------~--~--------------------~~~~~~~i~ffa~~~I~p~~ELT~dYg~~  322 (364)
T KOG1082|consen  292 --------------D--E--------------------FVLLYLRIGFFALRDISPGEELTLDYGKA  322 (364)
T ss_pred             --------------c--C--------------------CccchheeeeeeccccCCCcccchhhccc
Confidence                          1  0                    1233556789999999 889999999865

>KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription]

Probab=94.07  E-value=0.066  Score=54.47  Aligned_cols=62  Identities=24%  Similarity=0.406  Sum_probs=46.5

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecC-C---eEEecCCC
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYD-G---TVINAQPW  167 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~D-G---~vIDg~~w  167 (339)
                      +.+++|+|+  .+|.||+-+..+++|+.-+=|=|-+        |+-+..-.++|.|+..-|. +   .+|||.+.
T Consensus        30 l~i~~Ssv~--~~~lgV~s~~~i~~G~~FGP~~G~~--------~~~~~~~~~n~~y~W~I~~~d~~~~~iDg~d~   95 (396)
T KOG2461|consen   30 LRIKPSSVP--VTGLGVWSNASILPGTSFGPFEGEI--------IASIDSKSANNRYMWEIFSSDNGYEYIDGTDE   95 (396)
T ss_pred             eEeeccccC--CccccccccccccCcccccCccCcc--------ccccccccccCcceEEEEeCCCceEEeccCCh
Confidence            789999999  9999999999999999999998887        2222222345677665443 2   68999864

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco

Probab=93.54  E-value=0.059  Score=43.54  Aligned_cols=27  Identities=37%  Similarity=0.605  Sum_probs=21.5

Q ss_pred             CceeEEeeecCCCcEEEEecCeeeCcc
Q 019578          109 GQGLFLCGEANVGAVIAIYPGIIYSPA  135 (339)
Q Consensus       109 G~GvF~~G~v~~G~Vva~YPG~VY~p~  135 (339)
                      |.|||++-.+++|++|....+.+.++.
T Consensus         1 GrGl~At~dI~~Ge~I~~p~~~~~~~~   27 (162)
T PF00856_consen    1 GRGLFATRDIKAGEVILIPRPAILTPD   27 (162)
T ss_dssp             SEEEEESS-B-TTEEEEEESEEEEEHH
T ss_pred             CEEEEECccCCCCCEEEEECcceEEeh
Confidence            899999999999998888878777753

The SET domain itself turned out to be an uncommon structure. Although in all three studies, electron density maps revealed the location of the AdoMet or AdoHcy cofactor, the SET domain bears no similarity at all to the canonical/AdoMet-dependent methyltransferase fold. Strictly conserved in the C-terminal motif of the SET domain tyrosine could be involved in abstracting a proton from the protonated amino group of the substrate lysine, promoting its nucleophilic attack on the sulphonium methyl group of the AdoMet cofactor. In contrast to the AdoMet-dependent protein methyltranferases of the classical type, which tend to bind their polypeptide substrates on top of the cofactor, it is noted from the Rubisco LSMT structure that the AdoMet seems to bind in a separate cleft, suggesting how a polypeptide substrate could be subjected to multiple rounds of methylation without having to be released from the enzyme. In contrast, SET7/9 is able to add only a single methyl group to its substrate. It has been demonstrated that association of SET domain and myotubularin-related proteins modulates growth control []. The SET domain-containing Drosophila melanogaster (Fruit fly) protein, enhancer of zeste, has a function in segment determination and the mammalian homologue may be involved in the regulation of gene transcription and chromatin structure. Histone lysine methylation is part of the histone code that regulated chromatin function and epigenetic control of gene function. Histone lysine methyltransferases (HMTase) differ both in their substrate specificity for the various acceptor lysines as well as in their product specificity for the number of methyl groups (one, two, or three) they transfer. With just one exception [], the HMTases belong to SET family that can be classified according to the sequences surrounding the SET domain [, ]. Structural studies on the human SET7/9, a mono-methylase, have revealed the molecular basis for the specificity of the enzyme for the histone-target and the roles of the invariant residues in the SET domain in determining the methylation specificities []. The pre-SET domain, as found in the SUV39 SET family, contains nine invariant cysteine residues that are grouped into two segments separated by a region of variable length. These 9 cysteines coordinate 3 zinc ions to form to form a triangular cluster, where each of the zinc ions is coordinated by 4 four cysteines to give a tetrahedral configuration. The function of this domain is structural, holding together 2 long segments of random coils. The C-terminal region including the post-SET domain is disordered when not interacting with a histone tail and in the absence of zinc. The three conserved cysteines in the post-SET domain form a zinc-binding site when coupled to a fourth conserved cysteine in the knot-like structure close to the SET domain active site []. The structured post-SET region brings in the C-terminal residues that participate in S-adenosylmethine-binding and histone tail interactions. The three conserved cysteine residues are essential for HMTase activity, as replacement with serine abolishes HMTase activity [], []. ; GO: 0005515 protein binding; PDB: 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3H6L_A 3SMT_A 3K5K_A ....

>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only]

Probab=89.14  E-value=0.27  Score=48.97  Aligned_cols=47  Identities=19%  Similarity=0.253  Sum_probs=32.3

Q ss_pred             HHHHHHHh--CeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeC
Q 019578           85 SQRLKDAI--GYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  133 (339)
Q Consensus        85 s~~l~~~l--Gfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~  133 (339)
                      -+.|.+..  |=+--...-.+.  +.|+||-.+.....|..|--|-|..-.
T Consensus       243 ~~~l~~~vl~g~~egl~~~~~d--gKGRGv~a~~~F~rgdFVVEY~Gdlie  291 (392)
T KOG1085|consen  243 KHALRDTVLKGTNEGLLEVYKD--GKGRGVRAKVNFERGDFVVEYRGDLIE  291 (392)
T ss_pred             HHHHHHHHHhccccceeEEeec--cccceeEeecccccCceEEEEecceee
Confidence            34444443  333333334455  789999999999999999999998654

>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport]

Probab=86.46  E-value=3  Score=45.65  Aligned_cols=60  Identities=22%  Similarity=0.310  Sum_probs=41.1

Q ss_pred             CCCceeEEeeecCCCcEEEEecCeeeCcccccc-cCCCCCCCCCC--CeeeeecCCeEEecCCCC
Q 019578          107 EAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQN--PYLITRYDGTVINAQPWG  168 (339)
Q Consensus       107 ~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-ipgyP~vd~~N--~Yli~r~DG~vIDg~~wg  168 (339)
                      ..|-||=+.-.+++|+.|--|=|-|-+-.-|+. +.-|-+  ..|  -|.|+.--|.+|||.-.|
T Consensus       129 ~KG~GLRA~~dI~~g~FI~EY~GEVI~~~Ef~kR~~~Y~~--d~~kh~Yfm~L~~~e~IDAT~KG  191 (729)
T KOG4442|consen  129 KKGCGLRAEEDIPKGQFILEYIGEVIEEKEFEKRVKRYAK--DGIKHYYFMALQGGEYIDATKKG  191 (729)
T ss_pred             CcccceeeccccCCCcEEeeeccccccHHHHHHHHHHHHh--cCCceEEEEEecCCceecccccC
Confidence            667777777799999999999999988544431 111110  122  366666689999999774

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 2e-05
 Identities = 63/406 (15%), Positives = 115/406 (28%), Gaps = 134/406 (33%)

Query: 7   LSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVP--IESSAQSNAAPRRSGLSFAVGPT 64
           L  +Q+++       +++F   ++E+L     N    +         P      +     
Sbjct: 71  LLSKQEEM-------VQKF---VEEVL---RINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 65  ARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVG-AV 123
               D+ V  +   ++R +   +L+ A+   L+L+P         + + + G    G   
Sbjct: 118 RLYNDNQVFAK-YNVSRLQPYLKLRQAL---LELRP--------AKNVLIDGVLGSGKTW 165

Query: 124 IAI-----------YPGIIY--------SPA---------YYRYIPGY-PRVD------- 147
           +A+               I+        SP           Y+  P +  R D       
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 148 -------------AQNPY----LITR--YDGTVINAQPWGSGWD--------TR--ELWD 178
                           PY    L+     +    NA      ++        TR  ++ D
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA------FNLSCKILLTTRFKQVTD 279

Query: 179 GL-----TLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFA-- 231
            L     T   +  +S       D+   LL K +D +      E+L   NP  L+  A  
Sbjct: 280 FLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCRPQDLPREVL-TTNPRRLSIIAES 336

Query: 232 --NHPAKGMVPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRR-FGSFW-FKWGSGS 287
             +  A           +     +K     I   S    E    R+ F     F      
Sbjct: 337 IRDGLA-------TWDNWKHVNCDKLTT--IIESSLNVLEPAEYRKMFDRLSVFP----- 382

Query: 288 GSSTPV-LKTLALV--ATRAICDEEV---LLNYRLSNSKRRPVWYS 327
             S  +    L+L+           V   L  Y L   + +    S
Sbjct: 383 -PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	99.36
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	99.21
2qpw_A	149	PR domain zinc finger protein 2; methyltransferase	99.05
3ep0_A	170	PR domain zinc finger protein 12; PR domain-contai	98.99
3f9x_A	166	Histone-lysine N-methyltransferase SETD8; methyltr	98.87
3db5_A	151	PR domain zinc finger protein 4; methyltransferase	98.79
3ooi_A	232	Histone-lysine N-methyltransferase, H3 lysine-36 l	98.78
3ope_A	222	Probable histone-lysine N-methyltransferase ASH1L;	98.76
2w5y_A	192	Histone-lysine N-methyltransferase HRX; transcript	98.76
3dal_A	196	PR domain zinc finger protein 1; methyltransferase	98.75
1n3j_A	119	A612L, histone H3 lysine methyltransferase; beta b	98.7
3h6l_A	278	Histone-lysine N-methyltransferase SETD2; SET doma	98.65
3hna_A	287	Histone-lysine N-methyltransferase, H3 lysine-9 sp	98.57
2r3a_A	300	Histone-lysine N-methyltransferase SUV39H2; histon	98.39
1mvh_A	299	Cryptic LOCI regulator 4; lysine methyltransferase	98.39
3bo5_A	290	Histone-lysine N-methyltransferase setmar; SET dom	98.29
1ml9_A	302	Histone H3 methyltransferase DIM-5; adoMet-depende	98.21
3ihx_A	152	PR domain zinc finger protein 10; PRDM10, methyltr	97.8
3ray_A	237	PR domain-containing protein 11; structural genomi	97.7
3rq4_A	247	Histone-lysine N-methyltransferase SUV420H2; suppr	97.45
3s8p_A	273	Histone-lysine N-methyltransferase SUV420H1; SET d	97.16

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*

Probab=99.36  E-value=1.2e-12  Score=122.24  Aligned_cols=139  Identities=24%  Similarity=0.276  Sum_probs=101.0

Q ss_pred             EEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecCCeEEecCCCCCCCCcc
Q 019578           95 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTR  174 (339)
Q Consensus        95 s~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~DG~vIDg~~wg~gg~sr  174 (339)
                      .+.|++|.|+  ++|.|||++-.+++|++|+.|.|.|.+.......     -...|.|+|..-++.+||+...+   .+ 
T Consensus       110 ~~~v~~S~i~--~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R-----~~~~~~~~f~l~~~~~IDa~~~~---~~-  178 (261)
T 2f69_A          110 RVYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSR-----DWALNGNTLSLDEETVIDVPEPY---NH-  178 (261)
T ss_dssp             TEEEEECSST--TCCEEEEESSCBCTTCEEEEECCEEECHHHHHTS-----CGGGCSSCEECSSSCEEECCTTT---TS-
T ss_pred             eEEEEecCCC--CCceEEEECcccCCCCEEEEEeeEEeCHHHHHHH-----hhhhccceeeecCCeEEEccccc---cc-
Confidence            4899999998  9999999999999999999999999985433221     01125677877789999998542   10 


Q ss_pred             cccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCcc
Q 019578          175 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEK  254 (339)
Q Consensus       175 ~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~  254 (339)
                             .                                      ...--.+|+|+||--   .||+.+..++-|    
T Consensus       179 -------~--------------------------------------~~~~Gn~aRfiNHSC---~PN~~~~~~~~~----  206 (261)
T 2f69_A          179 -------V--------------------------------------SKYCASLGHKANHSF---TPNCIYDMFVHP----  206 (261)
T ss_dssp             -------T--------------------------------------TTCCSCCGGGCEECS---SCSEEEEEEEET----
T ss_pred             -------c--------------------------------------ccccccceeeEeeCC---CCCeEEEEEEcC----
Confidence                   0                                      000123578999963   489887664111    


Q ss_pred             cccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccCCC------CCCCCccc
Q 019578          255 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNS------KRRPVWYS  327 (339)
Q Consensus       255 ~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~------~~~P~WY~  327 (339)
                                                           ..-+.++|+|+||| .||||+.+|.+...      ...|+||.
T Consensus       207 -------------------------------------~~~~~i~i~A~RdI~~GEELt~dYg~~~~~~~~~~~~ap~W~~  249 (261)
T 2f69_A          207 -------------------------------------RFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQ  249 (261)
T ss_dssp             -------------------------------------TTEEEEEEEESSCBCTTCEEEECCCCCSCCC-----CSCHHHH
T ss_pred             -------------------------------------CCCcEEEEEECcccCCCCEEEEEcCCccccccccCccCccHHH
Confidence                                                 01356799999999 99999999998865      37899998


Q ss_pred             cCCHHH
Q 019578          328 PVDEEE  333 (339)
Q Consensus       328 pvD~ee  333 (339)
                      ..+.+-
T Consensus       250 ~~~~~~  255 (261)
T 2f69_A          250 VELKAF  255 (261)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            766543

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A

Probab=99.21  E-value=4.7e-11  Score=111.22  Aligned_cols=125  Identities=24%  Similarity=0.261  Sum_probs=92.4

Q ss_pred             EEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecCCeEEecCCCCCCCCcc
Q 019578           95 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTR  174 (339)
Q Consensus        95 s~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~DG~vIDg~~wg~gg~sr  174 (339)
                      .|.|++|.|+  ++|.|||++-.+++|++|+.|.|.+.+........     ...|.|+|..-+..+||+..-+.   + 
T Consensus       164 ~~~v~~S~i~--GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~-----~~~~~~~~~l~~~~~iDa~~~~~---~-  232 (293)
T 1h3i_A          164 RVYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD-----WALNGNTLSLDEETVIDVPEPYN---H-  232 (293)
T ss_dssp             TEEEEECSSS--SSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSC-----GGGCTTEEECSSSCEEECCTTTT---S-
T ss_pred             eEEEeeeecC--CCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHh-----hhcccCEEecCCCEEEeCccccc---c-
Confidence            4889999998  99999999999999999999999999854433221     12357788888899999975421   0 


Q ss_pred             cccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCcc
Q 019578          175 ELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEK  254 (339)
Q Consensus       175 ~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~  254 (339)
                             .                                      +..--.+|+|+||--   .||+.+..+..|.   
T Consensus       233 -------~--------------------------------------~~~~gn~ar~iNHsc---~pN~~~~~~~~~~---  261 (293)
T 1h3i_A          233 -------V--------------------------------------SKYCASLGHKANHSF---TPNCIYDMFVHPR---  261 (293)
T ss_dssp             -------T--------------------------------------TTCCSCCGGGSEEES---SCSEEEEEEEETT---
T ss_pred             -------c--------------------------------------ceeeccceeeeccCC---CCCeEEEEEEcCC---
Confidence                   0                                      001123689999953   4898877652221   


Q ss_pred             cccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccCCC
Q 019578          255 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNS  319 (339)
Q Consensus       255 ~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~  319 (339)
                                                            ..+.++|+|+||| .+|||+.+|.+...
T Consensus       262 --------------------------------------~~~~~~~~a~r~I~~geElt~~Yg~~~~  289 (293)
T 1h3i_A          262 --------------------------------------FGPIKCIRTLRAVEADEELTVAYGYDHS  289 (293)
T ss_dssp             --------------------------------------TEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred             --------------------------------------CCcEEEEEECCccCCCCEEEEecCCCCC
Confidence                                                  1466789999999 99999999998753

>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*

Probab=99.05  E-value=4.4e-10  Score=97.19  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=55.1

Q ss_pred             HHHHHHHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeec--CC-
Q 019578           83 ELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY--DG-  159 (339)
Q Consensus        83 ~vs~~l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~--DG-  159 (339)
                      ++-......+--.|.+++|.|+  ++|.|||++-.+++|+.|+-|.|.+.+..-.          ..+.|++.-+  |+ 
T Consensus        18 ~~~~~~~~~lp~~l~l~~S~i~--~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~----------~~~~Y~f~i~~~~~~   85 (149)
T 2qpw_A           18 EVPEHVLRGLPEEVRLFPSAVD--KTRIGVWATKPILKGKKFGPFVGDKKKRSQV----------KNNVYMWEVYYPNLG   85 (149)
T ss_dssp             GSCHHHHHTCCTTEEEEECSSC--TTSEEEEESSCBCTTCEECCCCCEEECGGGC----------CCSSSEEEEEETTTE
T ss_pred             hhhHHHHhCCCCCeEEEEcCCC--CCceEEEECCccCCCCEEEEEeCEEcCHHHh----------ccCceEEEEecCCCe
Confidence            3333444555556899999998  9999999999999999999999999986432          1467988765  33 


Q ss_pred             -eEEecCC
Q 019578          160 -TVINAQP  166 (339)
Q Consensus       160 -~vIDg~~  166 (339)
                       .+|||..
T Consensus        86 ~~~IDa~~   93 (149)
T 2qpw_A           86 WMCIDATD   93 (149)
T ss_dssp             EEEEECSS
T ss_pred             eEEEeCCC
Confidence             4688874

>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}

Probab=98.99  E-value=1.6e-09  Score=95.89  Aligned_cols=112  Identities=20%  Similarity=0.272  Sum_probs=80.9

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeec--CC---eEEecCCCCCC
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY--DG---TVINAQPWGSG  170 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~--DG---~vIDg~~wg~g  170 (339)
                      |.+++|+|+  ++|.|||.+-.+++|+.++-|-|.+.+..-...       +.++.|++.-+  ||   .+|||.+-.. 
T Consensus        29 l~l~~S~i~--~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~-------~~~~~y~w~i~~~~G~~~~~IDa~~e~~-   98 (170)
T 3ep0_A           29 VIIAQSSIP--GEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDI-------CKNNNLMWEVFNEDGTVRYFIDASQEDH-   98 (170)
T ss_dssp             EEEEECSSS--SCSEEEEESSCBCTTCEEEEECCEEECC-----------------CEEEEECTTSSEEEEEECC-----
T ss_pred             eEEEEcCCC--CCceEEEECcccCCCCEEEecCceecCHHHhcc-------ccCCceEEEEecCCCcEEEEEECCCCCC-
Confidence            778999999  999999999999999999999999999743211       23678998877  47   4799985200 


Q ss_pred             CCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCC
Q 019578          171 WDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFP  250 (339)
Q Consensus       171 g~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP  250 (339)
                                                               ..             ..-||||......+|+..+.++  
T Consensus        99 -----------------------------------------~N-------------WmR~Vn~A~~~~eqNl~a~q~~--  122 (170)
T 3ep0_A           99 -----------------------------------------RS-------------WMTYIKCARNEQEQNLEVVQIG--  122 (170)
T ss_dssp             --------------------------------------------------------GGGGCEECSSTTTCCEEEEEET--
T ss_pred             -----------------------------------------cc-------------eeeeEEecCCcccCCeeeEEEC--
Confidence                                                     01             2358899877778999888751  


Q ss_pred             CCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccC
Q 019578          251 LTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  317 (339)
Q Consensus       251 ~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  317 (339)
                                                                  +-+.+.|+||| .||||+++|.-+
T Consensus       123 --------------------------------------------~~I~~~a~RdI~pGeELlvwYg~~  146 (170)
T 3ep0_A          123 --------------------------------------------TSIFYKAIEMIPPDQELLVWYGNS  146 (170)
T ss_dssp             --------------------------------------------TEEEEEESSCBCTTCBCEEEECC-
T ss_pred             --------------------------------------------CEEEEEECcCcCCCCEEEEeeCHH
Confidence                                                        13567999999 999999999844

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*

Probab=98.87  E-value=4.5e-09  Score=89.86  Aligned_cols=48  Identities=10%  Similarity=0.220  Sum_probs=37.5

Q ss_pred             HHHHHHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcc
Q 019578           84 LSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPA  135 (339)
Q Consensus        84 vs~~l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~  135 (339)
                      +...+++-.-..+.+..+  +  +.|.|||+.-.+++|++|+-|.|.|.+..
T Consensus        20 ~~~~~q~g~~~~l~v~~~--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~   67 (166)
T 3f9x_A           20 IDELIESGKEEGMKIDLI--D--GKGRGVIATKQFSRGDFVVEYHGDLIEIT   67 (166)
T ss_dssp             HHHHHHHTCCTTEEEEEE--T--TTEEEEEESSCBCTTCEEEECCSEEEEHH
T ss_pred             HHHHHHcCCccCeEEEEC--C--CceeEEEECCCcCCCCEEEEeeceEcCHH
Confidence            344444445556666666  5  89999999999999999999999998743

>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}

Probab=98.79  E-value=1.8e-08  Score=86.99  Aligned_cols=112  Identities=18%  Similarity=0.165  Sum_probs=76.2

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeec-CC---eEEecCCCCCCC
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY-DG---TVINAQPWGSGW  171 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~-DG---~vIDg~~wg~gg  171 (339)
                      +.+++| ++  ++|.|||.+-.+++|+.++-|.|.+.+.......     .+.++.|++.-+ +|   .+|||.+-.   
T Consensus        25 l~l~~S-~~--~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~-----~~~~~~y~w~i~~~~~~~~~iD~~~~~---   93 (151)
T 3db5_A           25 LVLRQS-IV--GAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEW-----TDKAVNHIWKIYHNGVLEFCIITTDEN---   93 (151)
T ss_dssp             EEEEEC-C-----CEEEEESSCBCTTCEECCCCCEEEC----------------CCSEEEEEETTEEEEEEECCCTT---
T ss_pred             eEEEEc-cC--CCceEEEEecccCCCCEEEEeccEEeCHHHhhcc-----cccCCCceEEEEeCCCEEEEEECcCCC---
Confidence            456678 78  9999999999999999999999999997432211     134678888655 44   378988520   


Q ss_pred             CcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCC
Q 019578          172 DTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPL  251 (339)
Q Consensus       172 ~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~  251 (339)
                                                             ...|             .-||||......+|+..+.++   
T Consensus        94 ---------------------------------------~~NW-------------mR~Vn~A~~~~eqNl~a~q~~---  118 (151)
T 3db5_A           94 ---------------------------------------ECNW-------------MMFVRKARNREEQNLVAYPHD---  118 (151)
T ss_dssp             ---------------------------------------TSCG-------------GGGCEECSSTTTCCEEEEEET---
T ss_pred             ---------------------------------------CCcc-------------eeEEEecCCcccCceEEEEEC---
Confidence                                                   0012             347899887778999998761   


Q ss_pred             CcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeeccc
Q 019578          252 TEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRL  316 (339)
Q Consensus       252 ~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRl  316 (339)
                                                                 .-+.+.|+||| .||||++.|.-
T Consensus       119 -------------------------------------------~~I~~~a~rdI~pGeELlv~Yg~  141 (151)
T 3db5_A          119 -------------------------------------------GKIFFCTSQDIPPENELLFYYSR  141 (151)
T ss_dssp             -------------------------------------------TEEEEEESSCBCTTCBCEEEECC
T ss_pred             -------------------------------------------CEEEEEEccccCCCCEEEEecCH
Confidence                                                       12567999999 99999999963

>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}

Probab=98.78  E-value=6.5e-09  Score=95.00  Aligned_cols=76  Identities=20%  Similarity=0.206  Sum_probs=54.6

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccc-cCCCCCCCCCCCeeeeecCCeEEecCC
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRYDGTVINAQP  166 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-ipgyP~vd~~N~Yli~r~DG~vIDg~~  166 (339)
                      ++...-..+.|..|  +  +.|.|||+.-.+++|++|.-|.|.|.+..-++. +..+...+..+.|++.--++.+||+..
T Consensus        86 ~q~~~~~~lev~~t--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~  161 (232)
T 3ooi_A           86 FSKRQYPEVEIFRT--L--QRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGP  161 (232)
T ss_dssp             HHHTCCCCEEEEEC--S--SSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEE
T ss_pred             ccCCCCccEEEEEc--C--CceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccc
Confidence            45556677888888  4  789999999999999999999999998543221 000001123567888877888999874


Q ss_pred             C
Q 019578          167 W  167 (339)
Q Consensus       167 w  167 (339)
                      .
T Consensus       162 ~  162 (232)
T 3ooi_A          162 K  162 (232)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}

Probab=98.76  E-value=9.9e-09  Score=92.98  Aligned_cols=114  Identities=23%  Similarity=0.360  Sum_probs=83.6

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccc-c-CCCCCCCCCCCeeeeecCCeEEecCCCCCCCCc
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-I-PGYPRVDAQNPYLITRYDGTVINAQPWGSGWDT  173 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-i-pgyP~vd~~N~Yli~r~DG~vIDg~~wg~gg~s  173 (339)
                      |.+..|  +  +.|-|||+.-.+++|++|.-|.|.|.+.+.++. + ..|.  ...+.|++..-++.+||+...|     
T Consensus        76 lev~~t--~--~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~--~~~~~y~~~l~~~~~IDa~~~G-----  144 (222)
T 3ope_A           76 LERFRA--E--EKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH--NHSDHYCLNLDSGMVIDSYRMG-----  144 (222)
T ss_dssp             CEEEEC--T--TSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST--TCCSCCEEEEETTEEEECSSEE-----
T ss_pred             EEEEEc--C--CCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhc--ccCCeEEEecCCCEEEeCcccc-----
Confidence            566665  4  889999999999999999999999998644321 1 1111  1245688888889999988542     


Q ss_pred             ccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCc
Q 019578          174 RELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTE  253 (339)
Q Consensus       174 r~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~  253 (339)
                                                                          .++.|+||-=   .||+.+..+.+.   
T Consensus       145 ----------------------------------------------------n~aRfiNHSC---~PN~~~~~~~~~---  166 (222)
T 3ope_A          145 ----------------------------------------------------NEARFINHSC---DPNCEMQKWSVN---  166 (222)
T ss_dssp             ----------------------------------------------------CGGGGCEECS---SCSEEEEEEEET---
T ss_pred             ----------------------------------------------------ccceeeccCC---CCCeEeEEEEEC---
Confidence                                                                1356899963   688877654221   


Q ss_pred             ccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccC
Q 019578          254 KDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  317 (339)
Q Consensus       254 ~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  317 (339)
                                                            . ...++|+|+||| .||||++||.+.
T Consensus       167 --------------------------------------~-~~~i~~~A~RdI~~GEELT~dY~~~  192 (222)
T 3ope_A          167 --------------------------------------G-VYRIGLYALKDMPAGTELTYDYNFH  192 (222)
T ss_dssp             --------------------------------------T-EEEEEEEESSCBCTTCBCEECTTSS
T ss_pred             --------------------------------------C-eEEEEEEECCccCCCCEEEEECCCc
Confidence                                                  0 356889999999 999999999975

>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*

Probab=98.76  E-value=1.1e-08  Score=91.73  Aligned_cols=69  Identities=19%  Similarity=0.247  Sum_probs=48.2

Q ss_pred             eEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCccccccc-CCCCCCCCCCCeeeeecCCeEEecCCC
Q 019578           94 YTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYI-PGYPRVDAQNPYLITRYDGTVINAQPW  167 (339)
Q Consensus        94 fs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~i-pgyP~vd~~N~Yli~r~DG~vIDg~~w  167 (339)
                      ..|.|.+|.    ..|.|||++-.+++|++|+-|.|.|.+......- .-|-. ...+.|+|.--++.+||+...
T Consensus        52 ~~l~V~~s~----~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~-~~~~~Y~f~l~~~~~IDa~~~  121 (192)
T 2w5y_A           52 EAVGVYRSP----IHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDS-KGIGCYMFRIDDSEVVDATMH  121 (192)
T ss_dssp             HHEEEEECS----SSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHH-HTCCCCEEECSSSEEEECTTT
T ss_pred             CcEEEEEcC----CceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhh-cCCceeeeeecCceEEECccc
Confidence            348888884    5799999999999999999999999885432100 00000 012468887667889998744

>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}

Probab=98.75  E-value=2.4e-08  Score=90.40  Aligned_cols=115  Identities=18%  Similarity=0.251  Sum_probs=86.3

Q ss_pred             HhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeec-CC---eEEecCC
Q 019578           91 AIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY-DG---TVINAQP  166 (339)
Q Consensus        91 ~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~-DG---~vIDg~~  166 (339)
                      .|==.|.+++|+|+  ++|.|||.+-.+++|+.++-|-|.+++..-.   |-    +.++.|++.-+ +|   .+|||.+
T Consensus        55 SLP~~L~lr~S~i~--~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~---~~----~~~~~y~w~i~~~g~~~~~IDas~  125 (196)
T 3dal_A           55 SLPRNLLFKYATNS--EEVIGVMSKEYIPKGTRFGPLIGEIYTNDTV---PK----NANRKYFWRIYSRGELHHFIDGFN  125 (196)
T ss_dssp             TCCTTEEEEECTTS--CCEEEEEESSCBCTTEEECCCCCEEECTTTC---C-------CCTTEEEEEETTEEEEEEECCC
T ss_pred             cCCCCeEEEECCCC--CceeEEEEccccCCCCEEEeccceEcCHHHh---hh----ccCCcceeeeccCCCEEEEEECCC
Confidence            34334677999999  9999999999999999999999999997432   21    23567888766 45   5899975


Q ss_pred             CCCCCCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEe
Q 019578          167 WGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICP  246 (339)
Q Consensus       167 wg~gg~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~  246 (339)
                      -.                                          ...             ..-||||......+|+..+.
T Consensus       126 e~------------------------------------------~gN-------------WmRfVn~A~~~~eqNl~a~q  150 (196)
T 3dal_A          126 EE------------------------------------------KSN-------------WMRYVNPAHSPREQNLAACQ  150 (196)
T ss_dssp             TT------------------------------------------SSC-------------GGGGCEECSSTTTCCEEEEE
T ss_pred             CC------------------------------------------CCc-------------eEEeEEecCCcccCCcEEEE
Confidence            20                                          001             23588998877789999886


Q ss_pred             ecCCCCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecc
Q 019578          247 YDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYR  315 (339)
Q Consensus       247 yDfP~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYR  315 (339)
                      ++                                              .-+.+.|+||| .||||++.|.
T Consensus       151 ~~----------------------------------------------~~I~y~a~RdI~pGeELlvwYg  174 (196)
T 3dal_A          151 NG----------------------------------------------MNIYFYTIKPIPANQELLVWYC  174 (196)
T ss_dssp             ET----------------------------------------------TEEEEEESSCBCTTCBCEEEEC
T ss_pred             EC----------------------------------------------CEEEEEECcccCCCCEEEEecC
Confidence            61                                              12567999999 9999999996

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*

Probab=98.70  E-value=2.6e-08  Score=81.59  Aligned_cols=48  Identities=19%  Similarity=0.261  Sum_probs=38.2

Q ss_pred             EEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeee
Q 019578           95 TLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLI  154 (339)
Q Consensus        95 s~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli  154 (339)
                      .+.+++|.+    .|.|||++-.+++|++|+-|+|.|.+.......        .+.|++
T Consensus         5 ~~~v~~s~~----~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~--------~~~y~f   52 (119)
T 1n3j_A            5 RVIVKKSPL----GGYGVFARKSFEKGELVEECLCIVRHNDDWGTA--------LEDYLF   52 (119)
T ss_dssp             SEEEECSCS----SCCEEEECCCBCSCEEECCCCCEEECSHHHHHH--------SCSEEE
T ss_pred             CEEEEECCC----ceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc--------cCCeEE
Confidence            367888864    499999999999999999999999997544431        356776

>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*

Probab=98.57  E-value=7.6e-08  Score=90.86  Aligned_cols=120  Identities=19%  Similarity=0.275  Sum_probs=83.9

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecCC----eEEe
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDG----TVIN  163 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~DG----~vID  163 (339)
                      +++.+-..+.|..|  +  +.|-|||+.-.+++|++|.-|.|.|.+.+.....       ..+.|+|..-..    .+||
T Consensus       141 ~q~g~~~~l~v~~t--~--~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r-------~~~~Y~f~l~~~~~~~~~ID  209 (287)
T 3hna_A          141 VQNGLRARLQLYRT--R--DMGWGVRSLQDIPPGTFVCEYVGELISDSEADVR-------EEDSYLFDLDNKDGEVYCID  209 (287)
T ss_dssp             GGGCCCSCEEEEEC--S--SSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTC-------SCCTTEEESCCSSSSCEEEE
T ss_pred             cCcCCcccEEEEEc--C--CCceEEEeCcccCCCCEEEEeeeEEccHHHHhhh-------cccceEEEeccCCCceEEEe
Confidence            34445567888887  4  7899999999999999999999999986544332       146677653211    3555


Q ss_pred             cCCCCCCCCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeE
Q 019578          164 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVM  243 (339)
Q Consensus       164 g~~wg~gg~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~  243 (339)
                      +...                                                         -.++.|+||-=   .||+.
T Consensus       210 a~~~---------------------------------------------------------GN~aRFiNHSC---~PN~~  229 (287)
T 3hna_A          210 ARFY---------------------------------------------------------GNVSRFINHHC---EPNLV  229 (287)
T ss_dssp             EEEE---------------------------------------------------------ECGGGGCEECS---SCSEE
T ss_pred             cccc---------------------------------------------------------CCchheeeecC---CCCce
Confidence            5422                                                         12578999974   68987


Q ss_pred             EEeecCCCCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeeccc
Q 019578          244 ICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRL  316 (339)
Q Consensus       244 ~~~yDfP~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRl  316 (339)
                      ++.+-...                                      ...-...++|+|+||| .||||+++|..
T Consensus       230 ~~~v~~~~--------------------------------------~d~~~~~i~~~A~RdI~~GEELT~dYg~  265 (287)
T 3hna_A          230 PVRVFMAH--------------------------------------QDLRFPRIAFFSTRLIEAGEQLGFDYGE  265 (287)
T ss_dssp             EEEEESSC--------------------------------------CCTTCCEEEEEESSCBCTTCBCEECCCH
T ss_pred             eEEEEEec--------------------------------------CCCCceeEEEEEcceeCCCCeEEEeCCC
Confidence            76541110                                      1122557899999999 99999999974

>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}

Probab=98.39  E-value=4.8e-07  Score=85.99  Aligned_cols=122  Identities=24%  Similarity=0.334  Sum_probs=80.0

Q ss_pred             CeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccc-cCCCCCCCCCCCeeeeec---CCeEEecCCCC
Q 019578           93 GYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRY---DGTVINAQPWG  168 (339)
Q Consensus        93 Gfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-ipgyP~vd~~N~Yli~r~---DG~vIDg~~wg  168 (339)
                      -+.+.|-.++ +  +.|-|||+.-.+++|++|+-|.|.|.+...... ..-|-.  ..+.|+|.--   +..+|||..+|
T Consensus       139 ~~~l~vfrt~-~--~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~--~~~~Y~f~l~~~~~~~~IDa~~~G  213 (300)
T 2r3a_A          139 QYSLCIFRTS-N--GRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDN--KGITYLFDLDYESDEFTVDAARYG  213 (300)
T ss_dssp             CSCEEEEECS-S--SCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCH--HHHHTEEECCSSCSSEEEECSSEE
T ss_pred             cccEEEEEeC-C--CceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhh--ccccEEEEeecCCceEEEeccccc
Confidence            3555554432 2  689999999999999999999999998543321 101110  1235766432   45677776432


Q ss_pred             CCCCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeec
Q 019578          169 SGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYD  248 (339)
Q Consensus       169 ~gg~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yD  248 (339)
                                                                            |   ++.|+||--   .||+.+..+-
T Consensus       214 ------------------------------------------------------N---~aRfiNHSC---~PN~~~~~v~  233 (300)
T 2r3a_A          214 ------------------------------------------------------N---VSHFVNHSC---DPNLQVFNVF  233 (300)
T ss_dssp             ------------------------------------------------------C---GGGGCEECS---SCSEEEEEEE
T ss_pred             ------------------------------------------------------C---hHHheecCC---CCCEEEEEEE
Confidence                                                                  1   567999963   5898776541


Q ss_pred             CCCCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccC
Q 019578          249 FPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLS  317 (339)
Q Consensus       249 fP~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls  317 (339)
                      +-                +.                     + .-...++|+|+||| .||||++||...
T Consensus       234 ~~----------------~~---------------------d-~~~~~i~~~A~rdI~~GEELt~dY~~~  265 (300)
T 2r3a_A          234 ID----------------NL---------------------D-TRLPRIALFSTRTINAGEELTFDYQMK  265 (300)
T ss_dssp             SS----------------CC---------------------C-TTSCEEEEEESSCBCTTCEEEECGGGS
T ss_pred             ec----------------cC---------------------C-CCceEEEEEEccCCCCCCEEEEECCCC
Confidence            11                00                     0 11345789999999 999999999987

>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A

Probab=98.39  E-value=7.9e-07  Score=84.27  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=48.2

Q ss_pred             HHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccc-cCCCCCCCCCCCeeeeecC-----CeEE
Q 019578           89 KDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRYD-----GTVI  162 (339)
Q Consensus        89 ~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-ipgyP~vd~~N~Yli~r~D-----G~vI  162 (339)
                      ++-.-..+.|..|.    ..|-|||+.-.+++|++|+-|-|.|.+...+.. ...|-.  ..+.|+|.--.     ..+|
T Consensus       132 q~g~~~~l~v~~t~----~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~--~~~~Y~f~l~~~~~~~~~~I  205 (299)
T 1mvh_A          132 QRGRTLPLEIFKTK----EKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDD--DGITYLFDLDMFDDASEYTV  205 (299)
T ss_dssp             GGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCS--CSCCCEEEECSSCSSSCEEE
T ss_pred             cccccccEEEEEcC----CCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhc--cCceEEEEecCCCCCccEEE
Confidence            33344567777764    689999999999999999999999998543321 112211  13568875322     4567


Q ss_pred             ecCCC
Q 019578          163 NAQPW  167 (339)
Q Consensus       163 Dg~~w  167 (339)
                      ||..+
T Consensus       206 Da~~~  210 (299)
T 1mvh_A          206 DAQNY  210 (299)
T ss_dssp             ECSSE
T ss_pred             eCccc
Confidence            76643

>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}

Probab=98.29  E-value=1e-06  Score=83.25  Aligned_cols=45  Identities=13%  Similarity=0.227  Sum_probs=36.9

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCccc
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAY  136 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~  136 (339)
                      +++-+-+.|.|..|  +  ..|-|||+.-.+++|++|.-|-|.|.+..-
T Consensus       120 ~q~g~~~~l~V~~s--~--~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e  164 (290)
T 3bo5_A          120 VQKGLQFHFQVFKT--H--KKGWGLRTLEFIPKGRFVCEYAGEVLGFSE  164 (290)
T ss_dssp             GGGCCCSCEEEEEC--S--SSSEEEEESSCBCTTCEEEECCEEEECHHH
T ss_pred             cccCCcccEEEEEc--C--CCcceEeECCccCCCCEEEEEeeEEeCHHH
Confidence            33444567888887  3  789999999999999999999999998543

>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*

Probab=98.21  E-value=9.1e-07  Score=83.58  Aligned_cols=45  Identities=16%  Similarity=0.195  Sum_probs=36.9

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCccc
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAY  136 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~  136 (339)
                      +++-.-..|.|..|.    ..|-|||+.-.+++|++|+-|-|.|.+...
T Consensus       127 ~q~g~~~~l~v~~t~----~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e  171 (302)
T 1ml9_A          127 VERGRTVPLQIFRTK----DRGWGVKCPVNIKRGQFVDRYLGEIITSEE  171 (302)
T ss_dssp             HHHCCCSCEEEEECS----SSCEEEECSSCBCTTCEEEECCCEEECHHH
T ss_pred             cccCCccceEEEEcC----CCceEEEECCeeCCCCEEEEEeeEEeCHHH
Confidence            444455677777774    689999999999999999999999999643

>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}

Probab=97.80  E-value=8.3e-05  Score=64.45  Aligned_cols=28  Identities=11%  Similarity=-0.007  Sum_probs=25.8

Q ss_pred             CCceeEEeeecCCCcEEEEecCeeeCcc
Q 019578          108 AGQGLFLCGEANVGAVIAIYPGIIYSPA  135 (339)
Q Consensus       108 AG~GvF~~G~v~~G~Vva~YPG~VY~p~  135 (339)
                      +|.|||++..+++|+.++-|-|.+++.+
T Consensus        30 ~g~GVfA~~~IpkGt~fGPy~Ge~~~~~   57 (152)
T 3ihx_A           30 FLGGVFSKRRIPKRTQFGPVEGPLVRGS   57 (152)
T ss_dssp             TTCSEEESSCBCSSCEECCCCSCEECST
T ss_pred             cCCeEEECceecCCCEEEeeccEEcCHH
Confidence            4679999999999999999999999974

>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}

Probab=97.70  E-value=0.00011  Score=68.37  Aligned_cols=104  Identities=12%  Similarity=0.100  Sum_probs=74.1

Q ss_pred             EEecCCCCCcCCCCceeEE-eeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeec--CCe--EEecCCCCCC
Q 019578           96 LDLKPSQIPHEEAGQGLFL-CGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRY--DGT--VINAQPWGSG  170 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~-~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~--DG~--vIDg~~wg~g  170 (339)
                      +.+++|.++  +  .|||+ +-.+++|+.++-|-|.+++..           .+.|.|++.-+  +|.  +|||.+-.  
T Consensus        74 L~vr~S~i~--~--~Gv~~~~~~IpkGt~fGPY~Ge~~s~~-----------ea~~~y~wei~~~~g~~~~IDgsde~--  136 (237)
T 3ray_A           74 MEVVKDTSG--E--SDVRCVNEVIPKGHIFGPYEGQISTQD-----------KSAGFFSWLIVDKNNRYKSIDGSDET--  136 (237)
T ss_dssp             EEEEECTTS--C--EEEEECSSCBCTTEEECCCCSEEECC----------------CCEEEEECTTSCEEEEECCCTT--
T ss_pred             eEEEEcCCC--C--cceEEEeCcCCCCCEEEecccEEcChH-----------HccccceEEEEcCCCcEEEEecCCCC--
Confidence            677888875  3  57888 578999999999999998752           11355766655  343  78888520  


Q ss_pred             CCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCC
Q 019578          171 WDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFP  250 (339)
Q Consensus       171 g~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP  250 (339)
                                                              ...|             ..||||......+|+.++.++  
T Consensus       137 ----------------------------------------~gNW-------------mRfVn~Ar~~~EqNL~A~q~~--  161 (237)
T 3ray_A          137 ----------------------------------------KANW-------------MRYVVISREEREQNLLAFQHS--  161 (237)
T ss_dssp             ----------------------------------------TSCG-------------GGGCEECCCTTTCCEEEEEET--
T ss_pred             ----------------------------------------CCcc-------------eeEEEcCCCcccccceeEEeC--
Confidence                                                    0112             358899877778999998762  


Q ss_pred             CCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecc
Q 019578          251 LTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYR  315 (339)
Q Consensus       251 ~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYR  315 (339)
                                                                  .-+-+.|+||| .||||++.|.
T Consensus       162 --------------------------------------------~~Iyy~a~RdI~pGeELlVwYg  183 (237)
T 3ray_A          162 --------------------------------------------ERIYFRACRDIRPGEWLRVWYS  183 (237)
T ss_dssp             --------------------------------------------TEEEEEESSCBCTTCBCEEEEC
T ss_pred             --------------------------------------------CEEEEEEccccCCCCEEEEeeC
Confidence                                                        12456899999 9999999996

>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}

Probab=97.45  E-value=0.00028  Score=65.77  Aligned_cols=41  Identities=15%  Similarity=0.146  Sum_probs=33.3

Q ss_pred             hCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeC
Q 019578           92 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  133 (339)
Q Consensus        92 lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~  133 (339)
                      -||+|.--.- ....+.|.|||++-.+++|++|..|.|.+..
T Consensus       103 ~g~eV~~~~R-y~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~  143 (247)
T 3rq4_A          103 SGFTILPCTR-YSMETNGAKIVSTRAWKKNEKLELLVGCIAE  143 (247)
T ss_dssp             GCEEEEECCC-CTTCSSCEEEEESSCBCTTCEEEEEEEEEEE
T ss_pred             CCcEEEeeee-eeecCCcceEEeCCccCCCCEEEEEEeEEEe
Confidence            5999885441 1233789999999999999999999999975

>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}

Probab=97.16  E-value=0.00047  Score=65.27  Aligned_cols=41  Identities=17%  Similarity=0.155  Sum_probs=32.9

Q ss_pred             hCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeC
Q 019578           92 IGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYS  133 (339)
Q Consensus        92 lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~  133 (339)
                      .||+|..-.--. .+..|-|||++-.+++|++|.-|.|.|-.
T Consensus       131 ~gfeV~~~~ry~-~e~~G~GlfA~~~I~kGe~I~EY~Geii~  171 (273)
T 3s8p_A          131 SGFEILPCNRYS-SEQNGAKIVATKEWKRNDKIELLVGCIAE  171 (273)
T ss_dssp             GCEEEEEECCCT-TCSSEEEEEESSCBCTTCEEEEEEEEEEE
T ss_pred             CCceEEecccee-ecCCCceEEECCccCCCCEEEEEEEEEcc
Confidence            499888755321 23789999999999999999999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d2f69a2	171	Histone H3 K4-specific methyltransferase SET7/9 ca	99.58
d2g46a1	119	Viral histone H3 Lysine 27 Methyltransferase {Para	98.91
d1mvha_	269	SET domain of Clr4 {Fission yeast (Schizosaccharom	98.75
d1ml9a_	284	Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}	98.35
d2h2ja2	261	RuBisCo LSMT catalytic domain {Garden pea (Pisum s	90.2

>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.6e-15  Score=128.90  Aligned_cols=132  Identities=25%  Similarity=0.309  Sum_probs=96.1

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccccCCCCCCCCCCCeeeeecCCeEEecCCCCCCCCccc
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRE  175 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~ipgyP~vd~~N~Yli~r~DG~vIDg~~wg~gg~sr~  175 (339)
                      |+|++|+||  +||.|||++-.+++|++|+.|+|.+.+........     ...+.|++.-.++.++|+.....  .   
T Consensus        23 v~v~~S~Ip--~~G~GlFA~~~I~kG~~I~~Y~G~~i~~~e~~~~~-----~~~~~y~~~l~~~~~~d~~~~~~--~---   90 (171)
T d2f69a2          23 VYVAESLIS--SAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD-----WALNGNTLSLDEETVIDVPEPYN--H---   90 (171)
T ss_dssp             EEEEECSST--TCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSC-----GGGCSSCEECSSSCEEECCTTTT--S---
T ss_pred             EEEEeeccC--CCceehccCcccCCCCEEEEeeeEEECHHHHhhhh-----hhccccEEEeccceeecCCcccc--c---
Confidence            899999999  99999999999999999999999999865433321     12456888878888888875410  0   


Q ss_pred             ccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCCeEEEeecCCCCccc
Q 019578          176 LWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYDFPLTEKD  255 (339)
Q Consensus       176 ~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pNV~~~~yDfP~~~~~  255 (339)
                                           +                       ...-..+|.|+||-.   .||+.+......     
T Consensus        91 ---------------------~-----------------------~~~~g~~~rfiNHsc---~pN~~~~~~~~~-----  118 (171)
T d2f69a2          91 ---------------------V-----------------------SKYCASLGHKANHSF---TPNCIYDMFVHP-----  118 (171)
T ss_dssp             ---------------------T-----------------------TTCCSCCGGGCEECS---SCSEEEEEEEET-----
T ss_pred             ---------------------c-----------------------cccccCcceeeEccC---CCCceEEEEEec-----
Confidence                                 0                       000123577999964   588877655222     


Q ss_pred             ccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccCCCC------CCCCccc
Q 019578          256 MRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK------RRPVWYS  327 (339)
Q Consensus       256 Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~------~~P~WY~  327 (339)
                                                          ..-+.+.|+|+||| .|||||+||.+.-..      ..|+||.
T Consensus       119 ------------------------------------~~~~~i~~~A~RdI~~GEEL~~dYG~~~~~~~~~~p~~p~w~~  161 (171)
T d2f69a2         119 ------------------------------------RFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQ  161 (171)
T ss_dssp             ------------------------------------TTEEEEEEEESSCBCTTCEEEECCCCCSCCC-----CSCHHHH
T ss_pred             ------------------------------------CCCeEEEEEEccCcCCCCEEEEEeCCCCCCcccCCCCCcHHHH
Confidence                                                01345778999999 999999999976433      5788985

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Viral histone H3 Lysine 27 Methyltransferase
domain: Viral histone H3 Lysine 27 Methyltransferase
species: Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]

Probab=98.91  E-value=1.3e-09  Score=86.84  Aligned_cols=41  Identities=20%  Similarity=0.232  Sum_probs=34.4

Q ss_pred             EEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCccccccc
Q 019578           96 LDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRYI  140 (339)
Q Consensus        96 ~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~i  140 (339)
                      |.|++|  +  .+|.|||++-.+++|++|..|+|.+.....+..+
T Consensus         6 v~v~~s--~--~~G~GvfA~~~i~~g~~i~~~~g~~~~~~~~~~~   46 (119)
T d2g46a1           6 VIVKKS--P--LGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA   46 (119)
T ss_dssp             CEECCC--S--SCSSCEEECSCBCTTCCCEEEECEEECSTHHHHH
T ss_pred             EEEEEc--C--CCceEEEECchhhCCCEEecccEEEecHHHHhhh
Confidence            678888  4  6799999999999999999999999886544443

>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: SET domain of Clr4
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.75  E-value=1.5e-08  Score=92.49  Aligned_cols=129  Identities=23%  Similarity=0.287  Sum_probs=85.3

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcccccc-cCCCCCCCCCCCeeeeec-----CCeE
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPAYYRY-IPGYPRVDAQNPYLITRY-----DGTV  161 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~~~~~-ipgyP~vd~~N~Yli~r~-----DG~v  161 (339)
                      ++.-+-+.|.|..|.    ..|-|||+.-.+++|++|+.|-|.|.+..-... ..-|.  +....|++...     +..+
T Consensus       130 ~q~g~~~~leV~~t~----~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~--~~~~~~~~~l~~~~~~~~~~  203 (269)
T d1mvha_         130 VQRGRTLPLEIFKTK----EKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYD--DDGITYLFDLDMFDDASEYT  203 (269)
T ss_dssp             GGGCCCSCEEEEECS----SSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCC--SCSCCCEEEECSSCSSSCEE
T ss_pred             cCCCCccCEEEEEcC----CCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHh--hcCCcchhheecccccccce
Confidence            344456678888773    679999999999999999999999988533221 11111  11234554332     2445


Q ss_pred             EecCCCCCCCCcccccCCCCcCccCCCCCCcCcCchhHHHhhcCCcCCCCCCCCcccccccChhhhhhhhcCCCCCCCCC
Q 019578          162 INAQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPN  241 (339)
Q Consensus       162 IDg~~wg~gg~sr~~~~g~~~~~~~~~~~~a~~~~D~~w~~ls~Pl~~s~~~~~~~~le~~NPLAlGH~aNHpp~g~~pN  241 (339)
                      ||+...|                                                         .++.|+||-   -.||
T Consensus       204 iDa~~~G---------------------------------------------------------N~aRFiNHS---C~PN  223 (269)
T d1mvha_         204 VDAQNYG---------------------------------------------------------DVSRFFNHS---CSPN  223 (269)
T ss_dssp             EECSSEE---------------------------------------------------------CGGGGCEEC---SSCS
T ss_pred             eeeeecC---------------------------------------------------------cceEEeecC---CCCC
Confidence            5554321                                                         247899995   3699


Q ss_pred             eEEEeecCCCCcccccccCCceecCCchhhhhhhccccceecCCCCCCCCCceEEEEEEEeccc-CCceeEeecccCCCC
Q 019578          242 VMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAI-CDEEVLLNYRLSNSK  320 (339)
Q Consensus       242 V~~~~yDfP~~~~~Lr~YIPNv~~~~~~~~~m~r~g~~w~~~~~~~~~~~~vlr~vVLVAtRdI-~dEELflNYRls~~~  320 (339)
                      +.+..+-+-                .                      ....+.-|+|+|+||| .||||+.||.++.+.
T Consensus       224 ~~~~~v~~~----------------~----------------------~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d~  265 (269)
T d1mvha_         224 IAIYSAVRN----------------H----------------------GFRTIYDLAFFAIKDIQPLEELTFDYAGAKDF  265 (269)
T ss_dssp             EEEEEEESC----------------T----------------------TCTTSCEEEEEESSCBCTTCBCEECCCTTSSS
T ss_pred             cEEEEEEec----------------C----------------------CcCccceEEEEECCccCCCCEEEEecCCCcCC
Confidence            987765211                0                      1122456789999999 999999999988654

>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

Probab=98.35  E-value=6e-08  Score=88.22  Aligned_cols=44  Identities=16%  Similarity=0.204  Sum_probs=37.1

Q ss_pred             HHHHhCeEEEecCCCCCcCCCCceeEEeeecCCCcEEEEecCeeeCcc
Q 019578           88 LKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANVGAVIAIYPGIIYSPA  135 (339)
Q Consensus        88 l~~~lGfs~~v~~S~i~H~~AG~GvF~~G~v~~G~Vva~YPG~VY~p~  135 (339)
                      ++.-+-+.|.|..|  +  ..|-|||+.-.+++|++|+-|-|.|.+..
T Consensus       119 ~q~g~~~~lev~kt--~--~kG~Gv~a~~~I~kGt~I~eY~Gevi~~~  162 (284)
T d1ml9a_         119 VERGRTVPLQIFRT--K--DRGWGVKCPVNIKRGQFVDRYLGEIITSE  162 (284)
T ss_dssp             HHHCCCSCEEEEEC--S--SSCEEEECSSCBCTTCEEEECCCEEECHH
T ss_pred             ccCCCccCEEEEEc--C--CCceEEeeCCCcCCCCEEEEecCcccCHH
Confidence            45555677888887  4  67999999999999999999999999853

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.20  E-value=0.047  Score=45.78  Aligned_cols=22  Identities=27%  Similarity=0.357  Sum_probs=19.7

Q ss_pred             CCCceeEEeeecCCCcEEEEec
Q 019578          107 EAGQGLFLCGEANVGAVIAIYP  128 (339)
Q Consensus       107 ~AG~GvF~~G~v~~G~Vva~YP  128 (339)
                      ++|.|||++..+++|++|.--|
T Consensus        30 ~~GrGl~AtrdI~~Ge~il~vP   51 (261)
T d2h2ja2          30 TEGLGLVALKDISRNDVILQVP   51 (261)
T ss_dssp             TTEEEEECSSCCCTTCEEEEEE
T ss_pred             CceeEEEECCcCCCCCEEEEeC
Confidence            7899999999999999987654