Citrus Sinensis ID: 019676

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MMISLNLLPTLPSLQNPNFTSTQSSNPLKNPNFAAKPFSKSLKNPYFTILNLHPKSNPPQFSRTRWPFVSINPNFVNFQHQNPRPLNPKNLLYRLNCNKLKSSGEETKSVVNTGSGGGGGGDGGGGDGSDDEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGSTVPEGGCAVDSQLKTNPALPD
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECcccccccccccccEEEEEEccccccccccccEEEEccccccccccccccccEEEEEccccccEEEEEccEEEEccEEccccccccccccccccEEcccccEEEEccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccccc
*******LPTLPSLQNPNFT***SS******************NPYFTILNLH*******FSRTRWPFVSINPNFVNFQHQ******PKNLLYRLNC*******************************************LPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGSTVPEGG***************
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MMISLNLLPTLPSLQNPNFTSTQSSNPLKNPNFAAKPFSKSLKNPYFTILNLHPKSNPPQFSRTRWPFVSINPNFVNFQHQNPRPLNPKNLLYRLNCNKLKSSGEETKSVVNTGSGGGGGGDGGGGDGSDDEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGSTVPEGGCAVDSQLKTNPALPD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chloroplast processing peptidase Involved in the maturation of the plastid protein translocation channel. Required for the biogenesis of plastid internal membranes. May also function as a thylakoidal processing peptidase.probableQ8H0W1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.21.-Serine endopeptidases.probable
3.4.21.89Signal peptidase I.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1B12, chain A
Confidence level:very confident
Coverage over the Query: 166-312
View the alignment between query and template
View the model in PyMOL