Citrus Sinensis ID: 019713

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MAVVAQLSPSSYTETTRLSSSQLSLSSTHLSSLRRRAFRPIIGPRNPTISCSVNQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKVRLVDNFTLILFVMNCIVFL
ccccccccccccccccccccccccccccccccccccccccccccccccEEEECccccccccccccccccccccCEEEEEEEccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHccccccccccEEEEEccccccccccHHHHHHHHHccccccccEEEEccHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHcccccccccEEEECHHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccEEccEEccccccccccHHHHHHHHHHHHHccccEEEEEEcccEEEEc
****************************************I*******ISCSV******************NDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKVRLVDNFTLILFVMNCIVFL
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MAVVAQLSPSSYTETTRLSSSQLSLSSTHLSSLRRRAFRPIIGPRNPTISCSVNQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPSIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEIIKDHKWLEEGFTETIQKVRLVDNFTLILFVMNCIVFL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Malate dehydrogenase Catalyzes the reversible oxidation of malate to oxaloacetate.probableA9BVK0
Malate dehydrogenase [NADP], chloroplastic The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells.probableO48902
Malate dehydrogenase Catalyzes the reversible oxidation of malate to oxaloacetate.probableB6IZN7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 7MDH, chain A
Confidence level:very confident
Coverage over the Query: 73-80,93-324
View the alignment between query and template
View the model in PyMOL